Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/c/cmtk/cmtk_3.3.1p2+dfsg-1+b1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/cmtk-3.3.1p2+dfsg-1+b1em4pcdub/cmtk_3.3.1p2+dfsg-1+b1_amd64.buildinfo Get source package info: cmtk=3.3.1p2+dfsg-1 Source URL: http://snapshot.notset.fr/mr/package/cmtk/3.3.1p2+dfsg-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.1 autopoint=0.21-4 autotools-dev=20180224.1+nmu1 base-files=12 base-passwd=3.5.52 bash=5.1-3.1 bc=1.07.1-3+b1 binutils=2.37-9 binutils-common=2.37-9 binutils-x86-64-linux-gnu=2.37-9 bsdextrautils=2.37.2-4 bsdutils=1:2.37.2-4 build-essential=12.9 bzip2=1.0.8-4 cmake=3.21.4-1 cmake-data=3.21.4-1 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.2.0-10 dash=0.5.11+git20210903+057cd650a4ed-3 dc=1.07.1-3+b1 debconf=1.5.79 debhelper=13.5.2 debianutils=5.5-1 dh-autoreconf=20 dh-elpa-helper=2.0.9 dh-strip-nondeterminism=1.12.0-2 diffutils=1:3.7-5 dpkg=1.20.9 dpkg-dev=1.20.9 dwz=0.14-1 emacsen-common=3.0.4 file=1:5.39-3 findutils=4.8.0-1 g++=4:11.2.0-2 g++-11=11.2.0-10 gcc=4:11.2.0-2 gcc-11=11.2.0-10 gcc-11-base=11.2.0-10 gettext=0.21-4 gettext-base=0.21-4 grep=3.7-1 groff-base=1.22.4-7 gzip=1.10-4 hostname=3.23 icu-devtools=67.1-7 init-system-helpers=1.60 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libarchive-zip-perl=1.68-1 libarchive13=3.4.3-2+b1 libasan6=11.2.0-10 libatomic1=11.2.0-10 libattr1=1:2.5.1-1 libaudit-common=1:3.0.6-1 libaudit1=1:3.0.6-1 libbinutils=2.37-9 libblkid1=2.37.2-4 libbrotli1=1.0.9-2+b3 libbsd0=0.11.3-1 libbz2-1.0=1.0.8-4 libbz2-dev=1.0.8-4 libc-bin=2.32-4 libc-dev-bin=2.32-4 libc6=2.32-4 libc6-dev=2.32-4 libcap-ng0=0.7.9-2.2+b1 libcap2=1:2.44-1 libcc1-0=11.2.0-10 libcharls-dev=2.2.0+dfsg-3 libcharls2=2.2.0+dfsg-3 libcom-err2=1.46.4-1 libcrypt-dev=1:4.4.26-1 libcrypt1=1:4.4.26-1 libctf-nobfd0=2.37-9 libctf0=2.37-9 libcurl4=7.79.1-2 libdb5.3=5.3.28+dfsg1-0.8 libdcmtk-dev=3.6.6-2 libdcmtk16=3.6.6-2 libdebconfclient0=0.261 libdebhelper-perl=13.5.2 libdeflate-dev=1.8-1 libdeflate0=1.8-1 libdpkg-perl=1.20.9 libdrm-amdgpu1=2.4.108-1 libdrm-common=2.4.108-1 libdrm-intel1=2.4.108-1 libdrm-nouveau2=2.4.108-1 libdrm-radeon1=2.4.108-1 libdrm2=2.4.108-1 libedit2=3.1-20210910-1 libelf1=0.186-1 libexpat1=2.4.1-3 libffi8=3.4.2-3 libfftw3-bin=3.3.8-2 libfftw3-dev=3.3.8-2 libfftw3-double3=3.3.8-2 libfftw3-long3=3.3.8-2 libfftw3-quad3=3.3.8-2 libfftw3-single3=3.3.8-2 libfile-stripnondeterminism-perl=1.12.0-2 libfontenc1=1:1.1.4-1 libfreetype6=2.11.0+dfsg-1 libgcc-11-dev=11.2.0-10 libgcc-s1=11.2.0-10 libgcrypt20=1.9.4-3+b1 libgdbm-compat4=1.22-1 libgdbm6=1.22-1 libgl1=1.3.4-2+b1 libgl1-mesa-dri=21.2.5-1 libglapi-mesa=21.2.5-1 libglvnd0=1.3.4-2+b1 libglx-mesa0=21.2.5-1 libglx0=1.3.4-2+b1 libgmp10=2:6.2.1+dfsg-3 libgnutls30=3.7.2-2 libgomp1=11.2.0-10 libgpg-error0=1.42-3 libgssapi-krb5-2=1.18.3-7 libhogweed6=3.7.3-1 libice6=2:1.0.10-1 libicu-dev=67.1-7 libicu67=67.1-7 libidn2-0=2.3.2-2 libisl23=0.24-2 libitm1=11.2.0-10 libjbig-dev=2.1-3.1+b2 libjbig0=2.1-3.1+b2 libjpeg-dev=1:2.1.1-2 libjpeg62-turbo=1:2.1.1-2 libjpeg62-turbo-dev=1:2.1.1-2 libjsoncpp24=1.9.4-5 libk5crypto3=1.18.3-7 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-7 libkrb5support0=1.18.3-7 libldap-2.4-2=2.4.59+dfsg-1 libllvm12=1:12.0.1-16 liblsan0=11.2.0-10 liblz4-1=1.9.3-2 liblzma-dev=5.2.5-2 liblzma5=5.2.5-2 libmagic-mgc=1:5.39-3 libmagic1=1:5.39-3 libmd0=1.0.4-1 libmount1=2.37.2-4 libmpc3=1.2.1-1 libmpfr6=4.1.0-3 libmxml-dev=3.3-1 libmxml1=3.3-1 libncurses6=6.3-1 libncursesw6=6.3-1 libnettle8=3.7.3-1 libnghttp2-14=1.43.0-1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libp11-kit0=0.24.0-5 libpam-modules=1.4.0-10 libpam-modules-bin=1.4.0-10 libpam-runtime=1.4.0-10 libpam0g=1.4.0-10 libpciaccess0=0.16-1 libpcre2-8-0=10.39-3 libpcre3=2:8.39-13 libperl5.32=5.32.1-6 libpipeline1=1.5.4-1 libpixman-1-0=0.40.0-1 libpng-dev=1.6.37-3 libpng16-16=1.6.37-3 libprocps8=2:3.3.17-5 libpsl5=0.21.0-1.2 libquadmath0=11.2.0-10 libreadline8=8.1-2 librhash0=1.4.2-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.27+dfsg2-2 libsasl2-modules-db=2.1.27+dfsg2-2 libseccomp2=2.5.2-2 libselinux1=3.3-1 libsensors-config=1:3.6.0-7 libsensors5=1:3.6.0-7 libsigsegv2=2.13-1 libsm6=2:1.2.3-1 libsmartcols1=2.37.2-4 libsqlite3-0=3.36.0-2 libsqlite3-dev=3.36.0-2 libssh2-1=1.10.0-2 libssl-dev=1.1.1l-1 libssl1.1=1.1.1l-1 libstdc++-11-dev=11.2.0-10 libstdc++6=11.2.0-10 libsub-override-perl=0.09-2 libsystemd0=249.6-2 libtasn1-6=4.18.0-4 libtiff-dev=4.3.0-2 libtiff5=4.3.0-2 libtiffxx5=4.3.0-2 libtinfo6=6.3-1 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.6-15 libtsan0=11.2.0-10 libubsan1=11.2.0-10 libuchardet0=0.0.7-1 libudev1=249.6-2 libunistring2=0.9.10-6 libunwind8=1.3.2-2 libuuid1=2.37.2-4 libuv1=1.42.0-1 libvulkan1=1.2.189.0-2 libwebp6=0.6.1-2.1 libwrap0=7.6.q-31 libwrap0-dev=7.6.q-31 libx11-6=2:1.7.2-2+b1 libx11-data=2:1.7.2-2 libx11-xcb1=2:1.7.2-2+b1 libxau6=1:1.0.9-1 libxaw7=2:1.0.13-1.1 libxcb-dri2-0=1.14-3 libxcb-dri3-0=1.14-3 libxcb-glx0=1.14-3 libxcb-present0=1.14-3 libxcb-shm0=1.14-3 libxcb-sync1=1.14-3 libxcb-xfixes0=1.14-3 libxcb1=1.14-3 libxdmcp6=1:1.1.2-3 libxext6=2:1.3.4-1 libxfixes3=1:5.0.3-2 libxfont2=1:2.0.5-1 libxkbfile1=1:1.1.0-1 libxml2=2.9.12+dfsg-5+b1 libxml2-dev=2.9.12+dfsg-5+b1 libxmu6=2:1.1.2-2+b3 libxmuu1=2:1.1.2-2+b3 libxpm4=1:3.5.12-1 libxshmfence1=1.3-1 libxt6=1:1.2.0-1 libxxf86vm1=1:1.1.4-1+b2 libz3-4=4.8.12-1+b1 libzstd1=1.4.8+dfsg-3 linux-libc-dev=5.14.16-1 login=1:4.8.1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.9.4-2 mawk=1.3.4.20200120-2 ncurses-base=6.3-1 ncurses-bin=6.3-1 patch=2.7.6-7 perl=5.32.1-6 perl-base=5.32.1-6 perl-modules-5.32=5.32.1-6 po-debconf=1.0.21+nmu1 procps=2:3.3.17-5 readline-common=8.1-2 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sysvinit-utils=3.00-1 tar=1.34+dfsg-1 util-linux=2.37.2-4 x11-common=1:7.7+23 x11-xkb-utils=7.7+5 xauth=1:1.1-1 xkb-data=2.33-1 xserver-common=2:1.20.11-1 xvfb=2:1.20.11-1 xz-utils=5.2.5-2 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20211118T025207Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20211118T025207Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20211123T090017Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20211118T084946Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d cmtk=3.3.1p2+dfsg-1 && mkdir -p /build/cmtk-wFN1JA && dpkg-source --no-check -x /*.dsc /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg && cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg && { printf '%s' 'cmtk (3.3.1p2+dfsg-1+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against libdcmtk16 -- amd64 / i386 Build Daemon (x86-csail-01) Fri, 19 Nov 2021 21:02:21 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/cmtk-wFN1JA" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1637355741" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/cmtk-wFN1JA /tmp/cmtk-3.3.1p2+dfsg-1+b1em4pcdub bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20211118T084946Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.7k8bh9j78O as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.7k8bh9j78O Reading package lists... Building dependency tree... util-linux is already the newest version (2.37.2-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20211118T084946Z unstable/main amd64 libfakeroot amd64 1.26-1 [47.3 kB] Get:2 http://snapshot.notset.fr/archive/debian/20211118T084946Z unstable/main amd64 fakeroot amd64 1.26-1 [87.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (995 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4669 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.26-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.26-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.26-1_amd64.deb ... Unpacking fakeroot (1.26-1) ... Setting up libfakeroot:amd64 (1.26-1) ... Setting up fakeroot (1.26-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.32-4) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20211118T025207Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20211118T025207Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20211123T090017Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20211118T084946Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.7k8bh9j78O Get:1 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm InRelease [129 kB] Get:2 http://snapshot.notset.fr/archive/debian/20211123T090017Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20211118T084946Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm/main Sources [11.7 MB] Get:5 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm/main amd64 Packages [11.2 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20211123T090017Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20211123T090017Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20211123T090017Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20211123T090017Z unstable/main amd64 Packages [12.0 MB] Fetched 35.2 MB in 29s (1194 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.7k8bh9j78O I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d cmtk=3.3.1p2+dfsg-1 && mkdir -p /build/cmtk-wFN1JA && dpkg-source --no-check -x /*.dsc /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg && cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg && { printf '%s' 'cmtk (3.3.1p2+dfsg-1+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against libdcmtk16 -- amd64 / i386 Build Daemon (x86-csail-01) Fri, 19 Nov 2021 21:02:21 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/cmtk-wFN1JA"' exec /tmp/mmdebstrap.7k8bh9j78O Reading package lists... NOTICE: 'cmtk' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/cmtk.git Please use: git clone https://salsa.debian.org/med-team/cmtk.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1065 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm/main cmtk 3.3.1p2+dfsg-1 (dsc) [2271 B] Get:2 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm/main cmtk 3.3.1p2+dfsg-1 (tar) [1053 kB] Get:3 http://snapshot.notset.fr/archive/debian/20211118T025207Z bookworm/main cmtk 3.3.1p2+dfsg-1 (diff) [9912 B] Fetched 1065 kB in 1s (1197 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'cmtk_3.3.1p2+dfsg-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting cmtk in /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg dpkg-source: info: unpacking cmtk_3.3.1p2+dfsg.orig.tar.xz dpkg-source: info: unpacking cmtk_3.3.1p2+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying up_assure_no_as_needed_for_checklibdep dpkg-source: info: applying reproducible_build dpkg-source: info: applying fix_cmake_version_comparison dpkg-source: info: applying dcmtk-3.6.1-compatibility I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1637355741" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.7k8bh9j78O dpkg-buildpackage: info: source package cmtk dpkg-buildpackage: info: source version 3.3.1p2+dfsg-1+b1 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by amd64 / i386 Build Daemon (x86-csail-01) dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" debian/rules override_dh_auto_clean make[1]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg' dh_auto_clean install -d /build/cmtk-wFN1JA/cmtk-3.3.1p2\+dfsg/debian/.debhelper/generated/_source/home rm -rf debian/manpages make[1]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/cmtk.substvars debian/files rm -fr -- debian/cmtk/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg' dh_auto_configure -- \ -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ -DBUILD_APPS:BOOL=ON \ -DBUILD_DOCUMENTATION:BOOL=OFF \ -DBUILD_GUI:BOOL=OFF \ -DBUILD_SHARED_LIBS:BOOL=ON \ -DBUILD_TESTING:BOOL=OFF \ -DCMTK_BUILD_DCMTK:BOOL=OFF \ -DCMTK_BUILD_MXML:BOOL=OFF \ -DCMTK_BUILD_NRRD:BOOL=ON \ -DCMTK_BUILD_SQLITE:BOOL=OFF \ -DCMTK_BUILD_ZLIB:BOOL=OFF \ -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas \ -DCMTK_USE_DCMTK:BOOL=ON \ -DCMTK_USE_FFTW:BOOL=ON \ -DCMTK_USE_QT:BOOL=OFF \ -DCMTK_USE_SMP:BOOL=ON \ -DCMTK_USE_SQLITE:BOOL=ON \ -DDART_TESTING_TIMEOUT:STRING=15000 \ -DMXML_INCLUDE_DIR:PATH=/usr/include \ -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma \ -DCMAKE_SKIP_RPATH:BOOL=OFF \ -DCMTK_BUILD_WRAPPER:BOOL=ON \ install -d /build/cmtk-wFN1JA/cmtk-3.3.1p2\+dfsg/debian/.debhelper/generated/_source/home install -d obj-x86_64-linux-gnu cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DBUILD_APPS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF -DCMTK_BUILD_ZLIB:BOOL=OFF -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=OFF -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF -DCMTK_BUILD_WRAPPER:BOOL=ON .. CMake Deprecation Warning at CMakeLists.txt:38 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 11.2.0 -- The CXX compiler identification is GNU 11.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of void* -- Check size of void* - done -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Looking for limits.h -- Looking for limits.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for include files sys/types.h, sys/prctl.h -- Looking for include files sys/types.h, sys/prctl.h - found -- Could NOT find X11 (missing: X11_X11_INCLUDE_PATH X11_X11_LIB) -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Looking for C++ include iostream -- Looking for C++ include iostream - found -- Check for STD namespace -- Check for STD namespace - found -- Check for ANSI scope -- Check for ANSI scope - found -- Check for sstream -- Check for sstream - found -- System is Linux-5.10.71-1.fc32.qubes.x86_64 -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file execinfo.h -- Looking for include file execinfo.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Looking for include file termios.h -- Looking for include file termios.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file sys/ioctl.h -- Looking for include file sys/ioctl.h - found -- Looking for include file sys/procfs.h -- Looking for include file sys/procfs.h - found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file sys/times.h -- Looking for include file sys/times.h - found -- Looking for include file sys/utsname.h -- Looking for include file sys/utsname.h - found -- Check size of ((struct stat*)0)->st_mode -- Check size of ((struct stat*)0)->st_mode - done -- Check size of struct stat64 -- Check size of struct stat64 - failed -- Check the value of the 22nd bit of a 32-bit quiet-NaN -- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1 -- Looking for C++ include unordered_map -- Looking for C++ include unordered_map - found -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Looking for include file dispatch/dispatch.h -- Looking for include file dispatch/dispatch.h - not found -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE - Success -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Using system zlib -- Building bundled mxml due to outdated or broken system mxml (minimum version required is 2.7, version 2.8 is broken; installed version is 0.0) -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found system libbz2 -- Could NOT find LZMA (missing: LZMA_LIBRARIES LZMA_INCLUDE_DIRS) -- Found DCMTK: /usr/include/dcmtk/config -- - tested library png -- - tested library tiff -- - tested library CharLS -- Using system DCMTK library. -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) -- Found SQLite3: /usr/lib/x86_64-linux-gnu/libsqlite3.so -- Using system sqlite3 library CMake Deprecation Warning at Utilities/NrrdIO/CMakeLists.txt:31 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Check size of long long -- Check size of long long - done -- Looking for strdup -- Looking for strdup - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for vsnprintf -- Looking for vsnprintf - found CMake Warning (dev) at CMakeLists.txt:698 (EXPORT_LIBRARY_DEPENDENCIES): Policy CMP0033 is not set: The export_library_dependencies command should not be called. Run "cmake --help-policy CMP0033" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done CMake Warning (dev) at libs/System/CMakeLists.txt:77 (ADD_LIBRARY): Policy CMP0115 is not set: Source file extensions must be explicit. Run "cmake --help-policy CMP0115" for policy details. Use the cmake_policy command to set the policy and suppress this warning. File: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkStackBacktrace.cxx This warning is for project developers. Use -Wno-dev to suppress it. -- Generating done CMake Warning: Manually-specified variables were not used by the project: BUILD_DOCUMENTATION CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR DART_TESTING_TIMEOUT -- Build files have been written to: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg' dh_auto_build -a cd obj-x86_64-linux-gnu && make -j10 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg -B/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 0%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o -MF CMakeFiles/NrrdIO.dir/enumsNrrd.o.d -o CMakeFiles/NrrdIO.dir/enumsNrrd.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/enumsNrrd.c [ 0%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o [ 0%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o -MF CMakeFiles/NrrdIO.dir/comment.o.d -o CMakeFiles/NrrdIO.dir/comment.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/comment.c [ 0%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o [ 1%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o -MF CMakeFiles/NrrdIO.dir/mop.o.d -o CMakeFiles/NrrdIO.dir/mop.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/mop.c cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-private.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-private.c.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-private.c cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o -MF CMakeFiles/cmtkNumerics.dir/ap.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/ap.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/ap.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o -MF CMakeFiles/NrrdIO.dir/754.o.d -o CMakeFiles/NrrdIO.dir/754.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/754.c [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o -MF CMakeFiles/NrrdIO.dir/string.o.d -o CMakeFiles/NrrdIO.dir/string.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/string.c cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-attr.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-attr.c [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-entity.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-entity.c cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-index.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-index.c.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-index.c [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o -MF CMakeFiles/NrrdIO.dir/defaultsNrrd.o.d -o CMakeFiles/NrrdIO.dir/defaultsNrrd.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/defaultsNrrd.c [ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-get.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-get.c.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-get.c [ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-set.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-set.c.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-set.c [ 4%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-file.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-file.c.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-file.c [ 4%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-node.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-node.c.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-node.c [ 4%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-search.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-search.c.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-search.c [ 4%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o -MF CMakeFiles/cmtkMxml.dir/mxml-string.c.o.d -o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml/mxml-string.c [ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/bdsvd.cxx [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o -MF CMakeFiles/NrrdIO.dir/parseAir.o.d -o CMakeFiles/NrrdIO.dir/parseAir.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/parseAir.c [ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -MF CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/bidiagonal.cxx [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o -MF CMakeFiles/NrrdIO.dir/dio.o.d -o CMakeFiles/NrrdIO.dir/dio.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/dio.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o -MF CMakeFiles/NrrdIO.dir/format.o.d -o CMakeFiles/NrrdIO.dir/format.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/format.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o -MF CMakeFiles/NrrdIO.dir/parseNrrd.o.d -o CMakeFiles/NrrdIO.dir/parseNrrd.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/parseNrrd.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o -MF CMakeFiles/NrrdIO.dir/formatEPS.o.d -o CMakeFiles/NrrdIO.dir/formatEPS.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatEPS.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o -MF CMakeFiles/NrrdIO.dir/formatNRRD.o.d -o CMakeFiles/NrrdIO.dir/formatNRRD.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatNRRD.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o -MF CMakeFiles/NrrdIO.dir/encoding.o.d -o CMakeFiles/NrrdIO.dir/encoding.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encoding.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o [ 5%] Linking C shared library ../../bin/libcmtkMxml.so [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1 cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o -MF CMakeFiles/NrrdIO.dir/encodingAscii.o.d -o CMakeFiles/NrrdIO.dir/encodingAscii.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encodingAscii.c cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o -MF CMakeFiles/NrrdIO.dir/formatPNG.o.d -o CMakeFiles/NrrdIO.dir/formatPNG.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatPNG.c /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so CMakeFiles/cmtkMxml.dir/mxml-attr.c.o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o CMakeFiles/cmtkMxml.dir/mxml-index.c.o CMakeFiles/cmtkMxml.dir/mxml-private.c.o CMakeFiles/cmtkMxml.dir/mxml-get.c.o CMakeFiles/cmtkMxml.dir/mxml-set.c.o CMakeFiles/cmtkMxml.dir/mxml-file.c.o CMakeFiles/cmtkMxml.dir/mxml-node.c.o CMakeFiles/cmtkMxml.dir/mxml-search.c.o CMakeFiles/cmtkMxml.dir/mxml-string.c.o [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o -MF CMakeFiles/NrrdIO.dir/encodingBzip2.o.d -o CMakeFiles/NrrdIO.dir/encodingBzip2.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encodingBzip2.c make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o -MF CMakeFiles/NrrdIO.dir/formatPNM.o.d -o CMakeFiles/NrrdIO.dir/formatPNM.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatPNM.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o -MF CMakeFiles/NrrdIO.dir/accessors.o.d -o CMakeFiles/NrrdIO.dir/accessors.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/accessors.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o -MF CMakeFiles/NrrdIO.dir/encodingGzip.o.d -o CMakeFiles/NrrdIO.dir/encodingGzip.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encodingGzip.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o -MF CMakeFiles/NrrdIO.dir/formatText.o.d -o CMakeFiles/NrrdIO.dir/formatText.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatText.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o -MF CMakeFiles/NrrdIO.dir/array.o.d -o CMakeFiles/NrrdIO.dir/array.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/array.c [ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o -MF CMakeFiles/cmtkNumerics.dir/blas.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/blas.cxx [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o -MF CMakeFiles/NrrdIO.dir/encodingHex.o.d -o CMakeFiles/NrrdIO.dir/encodingHex.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encodingHex.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o -MF CMakeFiles/NrrdIO.dir/formatVTK.o.d -o CMakeFiles/NrrdIO.dir/formatVTK.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/formatVTK.c [ 7%] Built target cmtkMxml make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o -MF CMakeFiles/NrrdIO.dir/read.o.d -o CMakeFiles/NrrdIO.dir/read.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/read.c make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o -MF CMakeFiles/NrrdIO.dir/encodingRaw.o.d -o CMakeFiles/NrrdIO.dir/encodingRaw.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/encodingRaw.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o -MF CMakeFiles/NrrdIO.dir/arraysNrrd.o.d -o CMakeFiles/NrrdIO.dir/arraysNrrd.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/arraysNrrd.c [ 8%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLine.cxx [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o -MF CMakeFiles/NrrdIO.dir/gzio.o.d -o CMakeFiles/NrrdIO.dir/gzio.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/gzio.c [ 8%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineCallback.cxx [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o -MF CMakeFiles/NrrdIO.dir/reorder.o.d -o CMakeFiles/NrrdIO.dir/reorder.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/reorder.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o -MF CMakeFiles/NrrdIO.dir/write.o.d -o CMakeFiles/NrrdIO.dir/write.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/write.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o -MF CMakeFiles/NrrdIO.dir/axis.o.d -o CMakeFiles/NrrdIO.dir/axis.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/axis.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o -MF CMakeFiles/NrrdIO.dir/endianAir.o.d -o CMakeFiles/NrrdIO.dir/endianAir.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/endianAir.c [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -MF CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/cholesky.cxx [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o -MF CMakeFiles/NrrdIO.dir/keyvalue.o.d -o CMakeFiles/NrrdIO.dir/keyvalue.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/keyvalue.c [ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o -MF CMakeFiles/cmtkNumerics.dir/det.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/det.cxx [ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o -MF CMakeFiles/NrrdIO.dir/biffbiff.o.d -o CMakeFiles/NrrdIO.dir/biffbiff.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/biffbiff.c [ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o -MF CMakeFiles/NrrdIO.dir/biffmsg.o.d -o CMakeFiles/NrrdIO.dir/biffmsg.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/biffmsg.c [ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -MF CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/gammaf.cxx [ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -MF CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/hessenberg.cxx [ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o -MF CMakeFiles/NrrdIO.dir/endianNrrd.o.d -o CMakeFiles/NrrdIO.dir/endianNrrd.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/endianNrrd.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o -MF CMakeFiles/NrrdIO.dir/methodsNrrd.o.d -o CMakeFiles/NrrdIO.dir/methodsNrrd.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/methodsNrrd.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o -MF CMakeFiles/NrrdIO.dir/sane.o.d -o CMakeFiles/NrrdIO.dir/sane.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/sane.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o -MF CMakeFiles/NrrdIO.dir/enum.o.d -o CMakeFiles/NrrdIO.dir/enum.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/enum.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o -MF CMakeFiles/NrrdIO.dir/miscAir.o.d -o CMakeFiles/NrrdIO.dir/miscAir.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/miscAir.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o -MF CMakeFiles/NrrdIO.dir/simple.o.d -o CMakeFiles/NrrdIO.dir/simple.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO/simple.c [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -MF CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/hsschur.cxx [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -MF CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/ibetaf.cxx [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -MF CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/lbfgsb.cxx [ 13%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineItem.cxx [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o -MF CMakeFiles/cmtkNumerics.dir/lq.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/lq.cxx [ 13%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o -MF CMakeFiles/cmtkNumerics.dir/lu.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/lu.cxx [ 14%] Linking C shared library ../../bin/libNrrdIO.so cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -MF CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/normaldistr.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/nsevd.cxx [ 14%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o -MF CMakeFiles/cmtkNumerics.dir/qr.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/qr.cxx [ 15%] Built target NrrdIO [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -MF CMakeFiles/cmtkNumerics.dir/reflections.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/reflections.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -MF CMakeFiles/cmtkNumerics.dir/rotations.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/rotations.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -MF CMakeFiles/cmtkNumerics.dir/sblas.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/sblas.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/sevd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/sevd.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -MF CMakeFiles/cmtkNumerics.dir/spddet.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/spddet.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -MF CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/studenttdistr.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineHelp.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -MF CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/studentttests.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/svd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/svd.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineMan.cxx /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineMan.cxx:61:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 61 | StdOut << ".TH " << cmd << " \"1\" \"" << __DATE__ << "\" \"CMTK " << ppit->second << "\" \"The Computational Morphometry Toolkit\"\n"; | ^~~~~~~~ [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -MF CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/tdevd.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o [ 18%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -MF CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/mersenne.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -MF CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o.d -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Numerics/tridiagonal.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCommandLineXML.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStream.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStreamFile.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStreamPipe.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS 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/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStreamReaderBase.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStreamZlib.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkConsole.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkFileUtils.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkMemory.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkMountPoints.cxx [ 20%] Linking CXX shared library ../../bin/libcmtkNumerics.so cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkNumerics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkNumerics.so -o ../../bin/libcmtkNumerics.so CMakeFiles/cmtkNumerics.dir/ap.cxx.o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/blas.cxx.o 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-L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,::::::::::::: [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkProgress.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkProgressConsole.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkFileUtils.cxx: In function ‘std::string cmtk::FileUtils::GetAbsolutePath(const string&)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkFileUtils.cxx:147:11: warning: ignoring return value of ‘char* getcwd(char*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 147 | getcwd( absPath, PATH_MAX ); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~ [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkRegressionTracker.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkStackBacktrace.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkStrUtility.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkThreads.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkThreadPoolThreads.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkTimers.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkThreadSemaphore.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o [ 22%] Built target cmtkNumerics cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -MF CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o.d -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/System/cmtkCompressedStreamBZip2.cxx [ 22%] Linking CXX shared library ../../bin/libcmtkSystem.so cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSystem.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSystem.so -o ../../bin/libcmtkSystem.so CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 22%] Built target cmtkSystem make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkActiveDeformationModel.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAffineXform.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkActiveShapeModel.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAnatomicalOrientation.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAffineXformUniformVolume.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAnatomicalOrientationBase.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkBitVector.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGrid.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGrid_Crop.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGridFilter.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGridConnectedComponents.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGridLocalCorrelation.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDataGridMorphologicalOperators.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDeformationField.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDeformationField_Jacobian.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkDirectionSet.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFilterVolume.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitAffineToWarpXform.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitAffineToXformList.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitPolynomialToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitRigidToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitSplineWarpToDeformationField.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitSplineWarpToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitSplineWarpToXformList.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFitToXformListBase.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkFunctional.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkGeneralLinearModel.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkHistogram.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkHypothesisTests.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperation.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropRegion.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationDistanceMap.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationDownsample.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationMapValues.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationRegionFilter.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationResampleIsotropic.cxx /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx: In member function ‘virtual cmtk::UniformVolume::SmartPtr cmtk::ImageOperationCropThreshold::Apply(cmtk::UniformVolume::SmartPtr&)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:24: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:27: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:30: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:33: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:36: warning: format ‘%d’ expects argument of type ‘int’, but argument 6 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:39: warning: format ‘%d’ expects argument of type ‘int’, but argument 7 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationThreshold.cxx /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationDownsample.cxx: In static member function ‘static void cmtk::ImageOperationDownsample::NewGeneric(bool, const char*)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:43: warning: format ‘%d’ expects argument of type ‘int*’, but argument 3 has type ‘cmtk::Types::GridIndexType*’ {aka ‘long long int*’} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:47: warning: format ‘%d’ expects argument of type ‘int*’, but argument 4 has type ‘cmtk::Types::GridIndexType*’ {aka ‘long long int*’} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:51: warning: format ‘%d’ expects argument of type ‘int*’, but argument 5 has type ‘cmtk::Types::GridIndexType*’ {aka ‘long long int*’} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationOtsuThreshold.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationPruneHistogram.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkImageOperationRevert.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkJointHistogram.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkJointHistogramBase.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkLandmark.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS 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libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkLandmarkList.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkLandmarkPairList.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkMagphanEMR051.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkMagphanEMR051_GetPhantomImage.cxx [ 33%] Building CXX object 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libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkMathFunctionWrappers.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkMathUtil_LinAlg.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkMathUtil_Random.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS 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CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkMatrix3x3.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkMatrix4x4.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkMetaInformationObject.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkParametricPlane.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkPolynomialXform.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkScalarImage.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkScalarImageGradientField.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkSegmentationLabel.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkSplineWarpXform_Inverse.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkSplineWarpXform.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkSplineWarpXform_Jacobian.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkSplineWarpXform_Rigidity.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkSplineWarpXformUniformVolume.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTransformChangeToSpaceAffine.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTransformChangeFromSpaceAffine.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTransformedVolumeAxes.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypedArray.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypedArray_Statistics.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS 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/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramMatching.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramEqualization.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkTypes.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformDistanceMap.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolume.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolume_Crop.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolume_Differential.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolume_Resample.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolume_Space.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumeGaussianFilter.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumeLaplaceFilter.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumeInterpolatorBase.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumeInterpolatorPartialVolume.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumeMorphologicalOperators.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkUniformVolumePainter.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkVolumeClipping.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H 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libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkVolumeGridToGridLookup.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkWarpXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -MF CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o.d -o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkXform_Inverse.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && 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/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Base/cmtkXformList.cxx [ 42%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp 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CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 42%] Built target cmtkBase make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkSplineWarpXformITKIO.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkAffineXformITKIO.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamAffineXform.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamParametricPlane.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamPolynomialXform.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamWarpXform.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkClassStreamStudyList.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkFileFormat.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkGroupwiseRegistrationFunctionalIO.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageOperationApplyMask.cxx In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function ‘void cmtk::ImageFileDICOM::ReleaseDocument()’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx: In constructor ‘cmtk::ImageFileDICOM::ImageFileDICOM(const string&)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:155:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 155 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:164:26: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 164 | this->m_Dataset = std::auto_ptr( fileformat->getAndRemoveDataset() ); | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:170:27: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 170 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset.get(), this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageOperationMatchIntensities.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkLandmarkIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkLandmarkListIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkPhantomIO_MagphanEMR051.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkSegmentationLabelIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkSiemensCSAHeader.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkStudy.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkStudyList.cxx In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function ‘void cmtk::ImageFileDICOM::ReleaseDocument()’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStream.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamInput.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamOutput.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamStudylist.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFile.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileAnalyze.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileBioRad.cxx /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamOutput.cxx: In member function ‘cmtk::TypedStream::Condition cmtk::TypedStreamOutput::WriteIntArray(const char*, const long long int*, int, int)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkTypedStreamOutput.cxx:564:25: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘long long int’ [-Wformat=] 564 | fprintf( File, "%ld ", array[i] ); | ~~^ ~~~~~~~~ | | | | long int long long int | %lld [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileNRRD.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileNifti.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromSlices.cxx /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx: In static member function ‘static const SmartPtr cmtk::VolumeFromFile::ReadVanderbilt(const string&)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx:58:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 58 | fgets( line, 96, fp ); | ~~~~~^~~~~~~~~~~~~~~~ [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeIO.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformIO.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformListIO.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformIONifti.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkXformIONrrd.cxx /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx: In static member function ‘static void cmtk::VolumeFromFile::WriteMetaImage(const string&, const cmtk::UniformVolume&)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:33: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:36: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:39: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld [ 49%] Building C object libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -MF CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o.d -o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/nifti1_io_math.c [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromStudy.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -MF CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o.d -o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkSQLite.cxx In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:35: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/11/bits/locale_conv.h:41, from /usr/include/c++/11/locale:43, from /usr/include/c++/11/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx: In member function ‘void cmtk::DICOM::InitFromFile(const string&)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:112:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 112 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/11/bits/locale_conv.h:41, from /usr/include/c++/11/locale:43, from /usr/include/c++/11/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:133:27: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 133 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset, this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); | ^~~~~~~~ In file included from /usr/include/c++/11/bits/locale_conv.h:41, from /usr/include/c++/11/locale:43, from /usr/include/c++/11/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/11/bits/locale_conv.h:41, from /usr/include/c++/11/locale:43, from /usr/include/c++/11/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/11/bits/locale_conv.h:41, from /usr/include/c++/11/locale:43, from /usr/include/c++/11/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 50%] Linking CXX shared library ../../bin/libcmtkIO.so cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkIO.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkIO.so -o ../../bin/libcmtkIO.so CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads -lz make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 50%] Built target cmtkIO make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkAffineRegistration.cxx [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkBestNeighbourOptimizer.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkCongealingFunctional.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkEchoPlanarUnwarpFunctional.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkBestDirectionOptimizer.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkElasticRegistration.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalBase.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationOutput.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkGroupwiseRegistrationRMIFunctional.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkHausdorffDistance.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairRegistration.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityJointHistogram.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityMeasure.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureCR.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureMSD.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureNCC.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureRMS.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctional.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctionalBase.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkMakeInitialAffineTransformation.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkMultiChannelRegistrationFunctionalBase.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkProtocolCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkReformatVolume.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkRegistrationCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkRegistrationJointHistogram.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctional.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkSymmetricElasticFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkSymmetryPlaneFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkTypedArraySimilarity.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkTypedArraySimilarityMemory.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkTypedArraySimilarityRMI.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingCorrRatio.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingCrossCorrelation.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingElasticFunctional.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingMeanSquaredDifference.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingMetric.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelMatchingMetric_Type.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelRegistration.cxx [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -MF CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o.d -o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Registration/cmtkImageXformDB.cxx [ 63%] Linking CXX shared library ../../bin/libcmtkRegistration.so cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRegistration.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRegistration.so -o ../../bin/libcmtkRegistration.so CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 63%] Built target cmtkRegistration make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Recon /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Recon /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o -MF CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o.d -o CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -MF CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o.d -o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationSTAPLE.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationVoting.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveraging.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkOverlapMeasures.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkSimpleLevelset.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx [ 66%] Linking CXX shared library ../../bin/libcmtkRecon.so cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRecon.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRecon.so -o ../../bin/libcmtkRecon.so CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkRegistration.so ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 67%] Built target cmtkRecon [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -MD -MT libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -MF CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o.d -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx [ 67%] Linking CXX shared library ../../bin/libcmtkSegmentation.so cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSegmentation.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSegmentation.so -o ../../bin/libcmtkSegmentation.so CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkRegistration.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkMxml.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 67%] Built target cmtkSegmentation make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 67%] Building CXX object apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -MF CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o.d -o CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/detect_adni_phantom.cxx make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build [ 68%] Building CXX object apps/CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o [ 68%] Building CXX object apps/CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -MF CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o.d -o CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/detect_spheres_matched_filter.cxx [ 68%] Building CXX object apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build [ 68%] Building CXX object apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o -MF CMakeFiles/mcwarp.dir/mcwarp.cxx.o.d -o CMakeFiles/mcwarp.dir/mcwarp.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/mcwarp.cxx make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -MF CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o.d -o CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/asegment_sri24.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -MF CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o.d -o CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/xform2scalar.cxx make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o -MF CMakeFiles/dcm2image.dir/dcm2image.cxx.o.d -o CMakeFiles/dcm2image.dir/dcm2image.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/dcm2image.cxx make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o -MF CMakeFiles/xform2itk.dir/xform2itk.cxx.o.d -o CMakeFiles/xform2itk.dir/xform2itk.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/xform2itk.cxx [ 69%] Building CXX object apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -MF CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o.d -o CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/xform2dfield.cxx [ 69%] Building CXX object apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o [ 69%] Building CXX object apps/CMakeFiles/warp.dir/warp.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/warp.dir/warp.cxx.o -MF CMakeFiles/warp.dir/warp.cxx.o.d -o CMakeFiles/warp.dir/warp.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/warp.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o -MF CMakeFiles/warp2ps.dir/warp2ps.cxx.o.d -o CMakeFiles/warp2ps.dir/warp2ps.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/warp2ps.cxx [ 70%] Linking CXX executable ../bin/warp cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp.dir/warp.cxx.o -o ../bin/warp -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/dcm2image.cxx:45: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/dcm2image.cxx:45: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/dcm2image.cxx:45: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function ‘void cmtk::ImageFileDICOM::ReleaseDocument()’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /usr/include/dcmtk/ofstd/ofmem.h:32, from /usr/include/dcmtk/oflog/appender.h:33, from /usr/include/dcmtk/oflog/spi/apndatch.h:33, from /usr/include/dcmtk/oflog/logger.h:36, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target warp make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o -MF CMakeFiles/vtkxform.dir/vtkxform.cxx.o.d -o CMakeFiles/vtkxform.dir/vtkxform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx [ 70%] Linking CXX executable ../bin/detect_spheres_matched_filter cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_spheres_matched_filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -o ../bin/detect_spheres_matched_filter -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 70%] Linking CXX executable ../bin/asegment_sri24 cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment_sri24.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -o ../bin/asegment_sri24 -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 71%] Linking CXX executable ../bin/xform2scalar cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2scalar.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -o ../bin/xform2scalar -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 71%] Built target detect_spheres_matched_filter make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -MF CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o.d -o CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/volume_reconstruction.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target asegment_sri24 make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -MF CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o.d -o CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/unwarp_image_phantom.cxx [ 72%] Built target xform2scalar make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/unsplit.dir/unsplit.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/unsplit.dir/unsplit.cxx.o -MF CMakeFiles/unsplit.dir/unsplit.cxx.o.d -o CMakeFiles/unsplit.dir/unsplit.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/unsplit.cxx /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx: In function ‘int doMain(int, const char**)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx:190:54: warning: narrowing conversion of ‘xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](0)’ from ‘double’ to ‘float’ [-Wnarrowing] 190 | float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; | ^ /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx:190:54: warning: narrowing conversion of ‘xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](1)’ from ‘double’ to ‘float’ [-Wnarrowing] /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/vtkxform.cxx:190:54: warning: narrowing conversion of ‘xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](2)’ from ‘double’ to ‘float’ [-Wnarrowing] [ 72%] Linking CXX executable ../bin/detect_adni_phantom cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_adni_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -o ../bin/detect_adni_phantom -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 72%] Linking CXX executable ../bin/xform2itk cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2itk.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2itk.dir/xform2itk.cxx.o -o ../bin/xform2itk -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target detect_adni_phantom make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/ttest.dir/ttest.cxx.o [ 73%] Built target xform2itk cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/ttest.dir/ttest.cxx.o -MF CMakeFiles/ttest.dir/ttest.cxx.o.d -o CMakeFiles/ttest.dir/ttest.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/ttest.cxx make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/symplx.dir/symplx.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/symplx.dir/symplx.cxx.o -MF CMakeFiles/symplx.dir/symplx.cxx.o.d -o CMakeFiles/symplx.dir/symplx.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/symplx.cxx [ 73%] Linking CXX executable ../bin/xform2dfield cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -o ../bin/xform2dfield -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 73%] Linking CXX executable ../bin/warp2ps cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp2ps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp2ps.dir/warp2ps.cxx.o -o ../bin/warp2ps -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 73%] Built target xform2dfield make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/sympl.dir/sympl.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/sympl.dir/sympl.cxx.o -MF CMakeFiles/sympl.dir/sympl.cxx.o.d -o CMakeFiles/sympl.dir/sympl.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/sympl.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 73%] Built target warp2ps make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/streamxform.dir/streamxform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/streamxform.dir/streamxform.cxx.o -MF CMakeFiles/streamxform.dir/streamxform.cxx.o.d -o CMakeFiles/streamxform.dir/streamxform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/streamxform.cxx [ 73%] Linking CXX executable ../bin/symplx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/symplx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/symplx.dir/symplx.cxx.o -o ../bin/symplx -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 73%] Built target symplx make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/gmm.dir/gmm.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/gmm.dir/gmm.cxx.o -MF CMakeFiles/gmm.dir/gmm.cxx.o.d -o CMakeFiles/gmm.dir/gmm.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/gmm.cxx [ 73%] Linking CXX executable ../bin/unsplit cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unsplit.dir/link.txt --verbose=1 [ 74%] Linking CXX executable ../bin/unwarp_image_phantom cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unwarp_image_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unsplit.dir/unsplit.cxx.o -o ../bin/unsplit -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -o ../bin/unwarp_image_phantom -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 74%] Linking CXX executable ../bin/dcm2image cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2image.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dcm2image.dir/dcm2image.cxx.o -o ../bin/dcm2image -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target unsplit make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/jidb.dir/jidb.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/jidb.dir/jidb.cxx.o -MF CMakeFiles/jidb.dir/jidb.cxx.o.d -o CMakeFiles/jidb.dir/jidb.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/jidb.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target dcm2image make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 75%] Building CXX object apps/CMakeFiles/geomatch.dir/geomatch.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/geomatch.dir/geomatch.cxx.o -MF CMakeFiles/geomatch.dir/geomatch.cxx.o.d -o CMakeFiles/geomatch.dir/geomatch.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/geomatch.cxx [ 75%] Built target unwarp_image_phantom make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 76%] Building CXX object apps/CMakeFiles/dbtool.dir/dbtool.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/dbtool.dir/dbtool.cxx.o -MF CMakeFiles/dbtool.dir/dbtool.cxx.o.d -o CMakeFiles/dbtool.dir/dbtool.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/dbtool.cxx [ 76%] Linking CXX executable ../bin/vtkxform cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vtkxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vtkxform.dir/vtkxform.cxx.o -o ../bin/vtkxform -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 76%] Built target vtkxform make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 76%] Building CXX object apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -MF CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o.d -o CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/fit_spline_xform.cxx [ 76%] Linking CXX executable ../bin/ttest cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/ttest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/ttest.dir/ttest.cxx.o -o ../bin/ttest -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 76%] Built target ttest make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 76%] Building CXX object apps/CMakeFiles/reorient.dir/reorient.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/reorient.dir/reorient.cxx.o -MF CMakeFiles/reorient.dir/reorient.cxx.o.d -o CMakeFiles/reorient.dir/reorient.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/reorient.cxx [ 77%] Linking CXX executable ../bin/streamxform cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/streamxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/streamxform.dir/streamxform.cxx.o -o ../bin/streamxform -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target streamxform make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 77%] Building CXX object apps/CMakeFiles/film.dir/film.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/film.dir/film.cxx.o -MF CMakeFiles/film.dir/film.cxx.o.d -o CMakeFiles/film.dir/film.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/film.cxx [ 77%] Linking CXX executable ../bin/dbtool cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbtool.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dbtool.dir/dbtool.cxx.o -o ../bin/dbtool -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 77%] Linking CXX executable ../bin/sympl cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sympl.dir/link.txt --verbose=1 [ 78%] Linking CXX executable ../bin/gmm cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sympl.dir/sympl.cxx.o -o ../bin/sympl -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gmm.dir/gmm.cxx.o -o ../bin/gmm -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target sympl make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/fib2image.dir/fib2image.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fib2image.dir/fib2image.cxx.o -MF CMakeFiles/fib2image.dir/fib2image.cxx.o.d -o CMakeFiles/fib2image.dir/fib2image.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/fib2image.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target dbtool make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= [ 78%] Built target gmm make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -MF CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o.d -o CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/fit_affine_xform_landmarks.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/fibxform.dir/fibxform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fibxform.dir/fibxform.cxx.o -MF CMakeFiles/fibxform.dir/fibxform.cxx.o.d -o CMakeFiles/fibxform.dir/fibxform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/fibxform.cxx [ 80%] Linking CXX executable ../bin/geomatch cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/geomatch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/geomatch.dir/geomatch.cxx.o -o ../bin/geomatch -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu 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/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -MF CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o.d -o CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/epiunwarp.cxx [ 80%] Linking CXX executable ../bin/volume_reconstruction cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_reconstruction.dir/link.txt --verbose=1 [ 80%] Linking CXX executable ../bin/reorient cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reorient.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -o ../bin/volume_reconstruction -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reorient.dir/reorient.cxx.o -o ../bin/reorient -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target reorient make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o -MF CMakeFiles/hausdorff.dir/hausdorff.cxx.o.d -o CMakeFiles/hausdorff.dir/hausdorff.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/hausdorff.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Linking CXX executable ../bin/mcwarp cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcwarp.dir/link.txt --verbose=1 [ 80%] Built target volume_reconstruction make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcwarp.dir/mcwarp.cxx.o -o ../bin/mcwarp -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o -MF CMakeFiles/mat2dof.dir/mat2dof.cxx.o.d -o CMakeFiles/mat2dof.dir/mat2dof.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/mat2dof.cxx [ 80%] Linking CXX executable ../bin/fit_spline_xform cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_xform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -o ../bin/fit_spline_xform -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target fit_spline_xform make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target mcwarp make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= [ 80%] Building CXX object apps/CMakeFiles/regress.dir/regress.cxx.o make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/regress.dir/regress.cxx.o -MF CMakeFiles/regress.dir/regress.cxx.o.d -o CMakeFiles/regress.dir/regress.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/regress.cxx make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -MF CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o.d -o CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/dwi_mask_bad_slices.cxx [ 80%] Linking CXX executable ../bin/fit_affine_xform_landmarks cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform_landmarks.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -o ../bin/fit_affine_xform_landmarks -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target fit_affine_xform_landmarks make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Linking CXX executable ../bin/fib2image make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fib2image.dir/link.txt --verbose=1 make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/histogram.dir/histogram.cxx.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fib2image.dir/fib2image.cxx.o -o ../bin/fib2image -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/histogram.dir/histogram.cxx.o -MF CMakeFiles/histogram.dir/histogram.cxx.o.d -o CMakeFiles/histogram.dir/histogram.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/histogram.cxx [ 80%] Linking CXX executable ../bin/jidb cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/jidb.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/jidb.dir/jidb.cxx.o -o ../bin/jidb -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target fib2image make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -MF CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o.d -o CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/stream_pixels.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target jidb make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/average_images.dir/average_images.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/average_images.dir/average_images.cxx.o -MF CMakeFiles/average_images.dir/average_images.cxx.o.d -o CMakeFiles/average_images.dir/average_images.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/average_images.cxx [ 80%] Linking CXX executable ../bin/epiunwarp cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/epiunwarp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -o ../bin/epiunwarp -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 81%] Linking CXX executable ../bin/hausdorff cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/hausdorff.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/hausdorff.dir/hausdorff.cxx.o -o ../bin/hausdorff -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target epiunwarp make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -MF CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o.d -o CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/fit_affine_dfield.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target hausdorff make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/asegment.dir/asegment.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/asegment.dir/asegment.cxx.o -MF CMakeFiles/asegment.dir/asegment.cxx.o.d -o CMakeFiles/asegment.dir/asegment.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/asegment.cxx [ 81%] Linking CXX executable ../bin/film cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/film.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/film.dir/film.cxx.o -o ../bin/film -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target film make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 81%] Linking CXX executable ../bin/fibxform cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fibxform.dir/link.txt --verbose=1 [ 81%] Building CXX object apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o -MF CMakeFiles/pxsearch.dir/pxsearch.cxx.o.d -o CMakeFiles/pxsearch.dir/pxsearch.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/pxsearch.cxx /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fibxform.dir/fibxform.cxx.o -o ../bin/fibxform -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 82%] Linking CXX executable ../bin/mat2dof cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mat2dof.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mat2dof.dir/mat2dof.cxx.o -o ../bin/mat2dof -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 82%] Built target fibxform make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 82%] Building CXX object apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -MF CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o.d -o CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/fit_affine_xform.cxx [ 82%] Built target mat2dof make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/lvote.dir/lvote.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/lvote.dir/lvote.cxx.o -MF CMakeFiles/lvote.dir/lvote.cxx.o.d -o CMakeFiles/lvote.dir/lvote.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/lvote.cxx [ 83%] Linking CXX executable ../bin/fit_affine_dfield cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -o ../bin/fit_affine_dfield -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target fit_affine_dfield make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -MF CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o.d -o CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/mk_nifti_hdr.cxx [ 83%] Linking CXX executable ../bin/asegment cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment.dir/asegment.cxx.o -o ../bin/asegment -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 83%] Linking CXX executable ../bin/histogram cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/histogram.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/histogram.dir/histogram.cxx.o -o ../bin/histogram -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target asegment make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o -MF CMakeFiles/vol2csv.dir/vol2csv.cxx.o.d -o CMakeFiles/vol2csv.dir/vol2csv.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/vol2csv.cxx [ 83%] Linking CXX executable ../bin/stream_pixels make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/stream_pixels.dir/link.txt --verbose=1 [ 84%] Linking CXX executable ../bin/dwi_mask_bad_slices cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dwi_mask_bad_slices.dir/link.txt --verbose=1 [ 84%] Built target histogram /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -o ../bin/stream_pixels -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build [ 84%] Linking CXX executable ../bin/regress make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/regress.dir/link.txt --verbose=1 [ 84%] Linking CXX executable ../bin/pxsearch cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/pxsearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -o ../bin/dwi_mask_bad_slices -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 84%] Building CXX object apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/regress.dir/regress.cxx.o -o ../bin/regress -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -MF CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o.d -o CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/groupwise_warp.cxx /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/pxsearch.dir/pxsearch.cxx.o -o ../bin/pxsearch -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target stream_pixels make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target regress make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= [ 84%] Built target pxsearch make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/registrationx.dir/registrationx.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/registrationx.dir/registrationx.cxx.o -MF CMakeFiles/registrationx.dir/registrationx.cxx.o.d -o CMakeFiles/registrationx.dir/registrationx.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/registrationx.cxx [ 84%] Building CXX object apps/CMakeFiles/split.dir/split.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/split.dir/split.cxx.o -MF CMakeFiles/split.dir/split.cxx.o.d -o CMakeFiles/split.dir/split.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/split.cxx [ 84%] Building CXX object apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o -MF CMakeFiles/avg_adm.dir/avg_adm.cxx.o.d -o CMakeFiles/avg_adm.dir/avg_adm.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/avg_adm.cxx [ 84%] Linking CXX executable ../bin/lvote cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lvote.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lvote.dir/lvote.cxx.o -o ../bin/lvote -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 84%] Linking CXX executable ../bin/average_images cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_images.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_images.dir/average_images.cxx.o -o ../bin/average_images -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 84%] Built target dwi_mask_bad_slices [ 84%] Linking CXX executable ../bin/fit_affine_xform make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform.dir/link.txt --verbose=1 make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -o ../bin/fit_affine_xform -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -MF CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o.d -o CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/groupwise_affine.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target average_images make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color= [ 84%] Built target lvote make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -MF CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o.d -o CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/mk_analyze_hdr.cxx [ 84%] Building CXX object apps/CMakeFiles/average_labels.dir/average_labels.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/average_labels.dir/average_labels.cxx.o -MF CMakeFiles/average_labels.dir/average_labels.cxx.o.d -o CMakeFiles/average_labels.dir/average_labels.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/average_labels.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target fit_affine_xform make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o -MF CMakeFiles/concat_affine.dir/concat_affine.cxx.o.d -o CMakeFiles/concat_affine.dir/concat_affine.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/concat_affine.cxx [ 85%] Linking CXX executable ../bin/registrationx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registrationx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registrationx.dir/registrationx.cxx.o -o ../bin/registrationx -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target registrationx make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/warpx.dir/warpx.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/warpx.dir/warpx.cxx.o -MF CMakeFiles/warpx.dir/warpx.cxx.o.d -o CMakeFiles/warpx.dir/warpx.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/warpx.cxx [ 86%] Linking CXX executable ../bin/mk_nifti_hdr cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_nifti_hdr.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -o ../bin/mk_nifti_hdr -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target mk_nifti_hdr make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 86%] Building CXX object apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o -MF CMakeFiles/volume_injection.dir/volume_injection.cxx.o.d -o CMakeFiles/volume_injection.dir/volume_injection.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/volume_injection.cxx [ 87%] Linking CXX executable ../bin/concat_affine cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/concat_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/concat_affine.dir/concat_affine.cxx.o -o ../bin/concat_affine -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target concat_affine make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color= [ 87%] Linking CXX executable ../bin/warpx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warpx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warpx.dir/warpx.cxx.o -o ../bin/warpx -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 87%] Linking CXX executable ../bin/split make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/split.dir/link.txt --verbose=1 make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/split.dir/split.cxx.o -o ../bin/split -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 88%] Building CXX object apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -MF CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o.d -o CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/groupwise_init.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 88%] Built target warpx make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 89%] Building CXX object apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -MF CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o.d -o CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/mk_adni_phantom.cxx [ 89%] Built target split make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 89%] Building CXX object apps/CMakeFiles/sbai.dir/sbai.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/sbai.dir/sbai.cxx.o -MF CMakeFiles/sbai.dir/sbai.cxx.o.d -o CMakeFiles/sbai.dir/sbai.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/sbai.cxx [ 90%] Linking CXX executable ../bin/average_labels cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_labels.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_labels.dir/average_labels.cxx.o -o ../bin/average_labels -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 90%] Linking CXX executable ../bin/vol2csv cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vol2csv.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vol2csv.dir/vol2csv.cxx.o -o ../bin/vol2csv -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 90%] Built target vol2csv make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= [ 90%] Built target average_labels make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/average_affine.dir/average_affine.cxx.o make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/average_affine.dir/average_affine.cxx.o -MF CMakeFiles/average_affine.dir/average_affine.cxx.o.d -o CMakeFiles/average_affine.dir/average_affine.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/average_affine.cxx make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/describe.dir/describe.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/describe.dir/describe.cxx.o -MF CMakeFiles/describe.dir/describe.cxx.o.d -o CMakeFiles/describe.dir/describe.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/describe.cxx [ 91%] Linking CXX executable ../bin/mk_analyze_hdr cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_analyze_hdr.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -o ../bin/mk_analyze_hdr -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target mk_analyze_hdr make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/describe.cxx: In function ‘void DescribeImage(const char*)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/describe.cxx:88:30: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/describe.cxx:88:40: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/describe.cxx:88:50: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/describe.cxx:124:24: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/describe.cxx:124:29: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/describe.cxx:124:34: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld [ 91%] Linking CXX executable ../bin/groupwise_init cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_init.dir/link.txt --verbose=1 make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -o ../bin/groupwise_init -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/glm.dir/glm.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/glm.dir/glm.cxx.o -MF CMakeFiles/glm.dir/glm.cxx.o.d -o CMakeFiles/glm.dir/glm.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/glm.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 91%] Linking CXX executable ../bin/mk_adni_phantom cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_adni_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -o ../bin/mk_adni_phantom -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 91%] Linking CXX executable ../bin/avg_adm cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/avg_adm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/avg_adm.dir/avg_adm.cxx.o -o ../bin/avg_adm -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target avg_adm make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend [ 91%] Linking CXX executable ../bin/average_affine cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_affine.dir/average_affine.cxx.o -o ../bin/average_affine -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 91%] Linking CXX executable ../bin/groupwise_warp cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -o ../bin/groupwise_warp -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 91%] Linking CXX executable ../bin/groupwise_affine cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -o ../bin/groupwise_affine -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 91%] Linking CXX executable ../bin/sbai cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbai.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sbai.dir/sbai.cxx.o -o ../bin/sbai -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 91%] Built target groupwise_warp make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o -MF CMakeFiles/convert_warp.dir/convert_warp.cxx.o.d -o CMakeFiles/convert_warp.dir/convert_warp.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/convert_warp.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target sbai make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend [ 91%] Built target groupwise_affine make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 92%] Linking CXX executable ../bin/describe cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/describe.dir/link.txt --verbose=1 make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/describe.dir/describe.cxx.o -o ../bin/describe -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 92%] Building CXX object apps/CMakeFiles/destripe.dir/destripe.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/destripe.dir/destripe.cxx.o -MF CMakeFiles/destripe.dir/destripe.cxx.o.d -o CMakeFiles/destripe.dir/destripe.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/destripe.cxx [ 92%] Building CXX object apps/CMakeFiles/imagemath.dir/imagemath.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/imagemath.dir/imagemath.cxx.o -MF CMakeFiles/imagemath.dir/imagemath.cxx.o.d -o CMakeFiles/imagemath.dir/imagemath.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/imagemath.cxx [ 92%] Linking CXX executable ../bin/volume_injection cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_injection.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_injection.dir/volume_injection.cxx.o -o ../bin/volume_injection -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target volume_injection make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -MF CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o.d -o CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/make_initial_affine.cxx [ 92%] Building CXX object apps/CMakeFiles/similarity.dir/similarity.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/similarity.dir/similarity.cxx.o -MF CMakeFiles/similarity.dir/similarity.cxx.o.d -o CMakeFiles/similarity.dir/similarity.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/similarity.cxx [ 92%] Built target groupwise_init make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= [ 92%] Built target describe make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= [ 92%] Built target mk_adni_phantom make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o [ 92%] Building CXX object apps/CMakeFiles/gregxform.dir/gregxform.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o -MF CMakeFiles/dof2mat.dir/dof2mat.cxx.o.d -o CMakeFiles/dof2mat.dir/dof2mat.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/dof2mat.cxx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/gregxform.dir/gregxform.cxx.o -MF CMakeFiles/gregxform.dir/gregxform.cxx.o.d -o CMakeFiles/gregxform.dir/gregxform.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/gregxform.cxx [ 92%] Building CXX object apps/CMakeFiles/levelset.dir/levelset.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/levelset.dir/levelset.cxx.o -MF CMakeFiles/levelset.dir/levelset.cxx.o.d -o CMakeFiles/levelset.dir/levelset.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/levelset.cxx [ 92%] Built target average_affine make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -MF CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o.d -o CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/fit_spline_dfield.cxx [ 92%] Linking CXX executable ../bin/convert_warp cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convert_warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convert_warp.dir/convert_warp.cxx.o -o ../bin/convert_warp -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target convert_warp make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/lsba.dir/lsba.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/lsba.dir/lsba.cxx.o -MF CMakeFiles/lsba.dir/lsba.cxx.o.d -o CMakeFiles/lsba.dir/lsba.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/lsba.cxx /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/gregxform.cxx: In function ‘int doMain(int, const char**)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/gregxform.cxx:191:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 191 | fgets( line, 80, infile ); | ~~~~~^~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable ../bin/levelset cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/levelset.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/levelset.dir/levelset.cxx.o -o ../bin/levelset -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 93%] Linking CXX executable ../bin/glm cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/glm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/glm.dir/glm.cxx.o -o ../bin/glm -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target glm make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend [ 93%] Linking CXX executable ../bin/dof2mat cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dof2mat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dof2mat.dir/dof2mat.cxx.o -o ../bin/dof2mat -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -MF CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o.d -o CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/interleaved_bad_slices.cxx [ 94%] Built target levelset make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 94%] Linking CXX executable ../bin/destripe cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/destripe.dir/link.txt --verbose=1 [ 94%] Building CXX object apps/CMakeFiles/lmsba.dir/lmsba.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/lmsba.dir/lmsba.cxx.o -MF CMakeFiles/lmsba.dir/lmsba.cxx.o.d -o CMakeFiles/lmsba.dir/lmsba.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/lmsba.cxx /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/destripe.dir/destripe.cxx.o -o ../bin/destripe -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 94%] Built target dof2mat make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/statistics.dir/statistics.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/statistics.dir/statistics.cxx.o -MF CMakeFiles/statistics.dir/statistics.cxx.o.d -o CMakeFiles/statistics.dir/statistics.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/statistics.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target destripe make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -MF CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o.d -o CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/mk_phantom_3d.cxx [ 95%] Linking CXX executable ../bin/fit_spline_dfield cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -o ../bin/fit_spline_dfield -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target fit_spline_dfield make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/mrbias.dir/mrbias.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/mrbias.dir/mrbias.cxx.o -MF CMakeFiles/mrbias.dir/mrbias.cxx.o.d -o CMakeFiles/mrbias.dir/mrbias.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/mrbias.cxx [ 95%] Linking CXX executable ../bin/make_initial_affine cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_initial_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -o ../bin/make_initial_affine -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target make_initial_affine make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/convertx.dir/convertx.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/convertx.dir/convertx.cxx.o -MF CMakeFiles/convertx.dir/convertx.cxx.o.d -o CMakeFiles/convertx.dir/convertx.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/convertx.cxx [ 95%] Linking CXX executable ../bin/gregxform cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gregxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gregxform.dir/gregxform.cxx.o -o ../bin/gregxform -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 95%] Linking CXX executable ../bin/similarity cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/similarity.dir/similarity.cxx.o -o ../bin/similarity -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target gregxform make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target similarity [ 96%] Building CXX object apps/CMakeFiles/overlap.dir/overlap.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/overlap.dir/overlap.cxx.o -MF CMakeFiles/overlap.dir/overlap.cxx.o.d -o CMakeFiles/overlap.dir/overlap.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/overlap.cxx make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/filter.dir/filter.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/filter.dir/filter.cxx.o -MF CMakeFiles/filter.dir/filter.cxx.o.d -o CMakeFiles/filter.dir/filter.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/filter.cxx [ 96%] Linking CXX executable ../bin/imagemath cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/imagemath.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/imagemath.dir/imagemath.cxx.o -o ../bin/imagemath -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target imagemath make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/mk_phantom_3d.cxx: In function ‘int doMain(int, const char**)’: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/mk_phantom_3d.cxx:192:14: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 192 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/11/memory:76, from /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/mk_phantom_3d.cxx:46: /usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 96%] Building CXX object apps/CMakeFiles/probe.dir/probe.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/probe.dir/probe.cxx.o -MF CMakeFiles/probe.dir/probe.cxx.o.d -o CMakeFiles/probe.dir/probe.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/probe.cxx [ 96%] Linking CXX executable ../bin/lsba cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lsba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lsba.dir/lsba.cxx.o -o ../bin/lsba -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target lsba make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 97%] Building CXX object apps/CMakeFiles/reformatx.dir/reformatx.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/reformatx.dir/reformatx.cxx.o -MF CMakeFiles/reformatx.dir/reformatx.cxx.o.d -o CMakeFiles/reformatx.dir/reformatx.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/reformatx.cxx [ 97%] Linking CXX executable ../bin/lmsba cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmsba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lmsba.dir/lmsba.cxx.o -o ../bin/lmsba -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 97%] Linking CXX executable ../bin/interleaved_bad_slices cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/interleaved_bad_slices.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -o ../bin/interleaved_bad_slices -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target lmsba make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 97%] Building CXX object apps/CMakeFiles/registration.dir/registration.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/registration.dir/registration.cxx.o -MF CMakeFiles/registration.dir/registration.cxx.o.d -o CMakeFiles/registration.dir/registration.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/registration.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target interleaved_bad_slices make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 98%] Building CXX object apps/CMakeFiles/sba.dir/sba.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/sba.dir/sba.cxx.o -MF CMakeFiles/sba.dir/sba.cxx.o.d -o CMakeFiles/sba.dir/sba.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/sba.cxx [ 98%] Linking CXX executable ../bin/registration cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registration.dir/registration.cxx.o -o ../bin/registration -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target registration make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 98%] Building CXX object apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ 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../bin/statistics cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/statistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/statistics.dir/statistics.cxx.o -o ../bin/statistics -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 98%] Linking CXX executable ../bin/overlap cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/overlap.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/overlap.dir/overlap.cxx.o -o ../bin/overlap -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target statistics make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 98%] Building CXX object apps/CMakeFiles/sequence.dir/sequence.cxx.o cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/mxml -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/Utilities/NrrdIO -I/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/libs -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -MD -MT apps/CMakeFiles/sequence.dir/sequence.cxx.o -MF CMakeFiles/sequence.dir/sequence.cxx.o.d -o CMakeFiles/sequence.dir/sequence.cxx.o -c /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/apps/sequence.cxx make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target overlap [ 98%] Linking CXX executable ../bin/mk_phantom_3d cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_phantom_3d.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -o ../bin/mk_phantom_3d -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 98%] Linking CXX executable ../bin/sba cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sba.dir/sba.cxx.o -o ../bin/sba -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 98%] Linking CXX executable ../bin/convertx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convertx.dir/link.txt --verbose=1 [ 99%] Linking CXX executable ../bin/filter cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/filter.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/filter.dir/filter.cxx.o -o ../bin/filter -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convertx.dir/convertx.cxx.o -o ../bin/convertx -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 99%] Built target mk_phantom_3d make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [100%] Linking CXX executable ../bin/sequence [100%] Linking CXX executable ../bin/probe cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sequence.dir/link.txt --verbose=1 cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/probe.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [100%] Built target convertx /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/probe.dir/probe.cxx.o -o ../bin/probe -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sequence.dir/sequence.cxx.o -o ../bin/sequence -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [100%] Built target sba make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [100%] Built target probe [100%] Linking CXX executable ../bin/mrbias cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mrbias.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mrbias.dir/mrbias.cxx.o -o ../bin/mrbias -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [100%] Built target filter make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [100%] Linking CXX executable ../bin/reformatx cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reformatx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reformatx.dir/reformatx.cxx.o -o ../bin/reformatx -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [100%] Built target mrbias [100%] Built target sequence make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [100%] Built target reformatx [100%] Linking CXX executable ../bin/mcaffine cd /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcaffine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcaffine.dir/mcaffine.cxx.o -o ../bin/mcaffine -L/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu:/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' [100%] Built target mcaffine make[2]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep -a rm -f -- debian/cmtk.substvars rm -fr -- debian/.debhelper/generated/cmtk/ debian/cmtk/ debian/tmp/ dh_installdirs -a install -d debian/cmtk/etc/cmtk rm -f debian/cmtk.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg' dh_auto_install cd obj-x86_64-linux-gnu && make -j10 install DESTDIR=/build/cmtk-wFN1JA/cmtk-3.3.1p2\+dfsg/debian/cmtk AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg -B/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc/COPYING.txt -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc/README.txt -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.cmtk -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.sqlite3 -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.dcmtk -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.numdiff -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.NrrdIO -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.mxml -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.vtk -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.alglib -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.zlib -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/UseCMTK.cmake -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/CMTKConfig.cmake -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/cmtkconfig.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/CMTKLibraryDepends.cmake -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libNrrdIO.so -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/NrrdIO.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/cmtk_NrrdIO_mangle.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/privateAir.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/privateBiff.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/privateNrrd.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/teem32bit.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/teemDio.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/teemEndian.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/teemPng.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/teemQnanhibit.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkMxml.so -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/cmtk_mxml_mangle.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/mxml-private.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/mxml.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/config.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/film -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/film" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/split -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/split" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCannotBeCopied.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLine.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineTypeTraits.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCompressedStream.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkConsole.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCoverity.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkDebugOutput.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkException.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkExitException.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFFTW.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFileUtils.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkLockingPtr.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMemory.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMountPoints.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMutexLock.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgress.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgressConsole.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkRegressionTracker.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounter.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterGCD.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterMutex.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartConstPtr.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartPtr.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStackBacktrace.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStrUtility.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTestFunctionMap.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameters.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPool.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphore.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSystemTypes.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreads.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTimers.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/doxygen.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineConvert.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineItem.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineList.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineOption.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineVector.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreAppleIsRetarded.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreNone.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphorePOSIX.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreWindows.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ap.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/apvt.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bdsvd.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bidiagonal.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/blas.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/cholesky.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/det.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/gammaf.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hessenberg.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hsschur.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ibetaf.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/igammaf.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lbfgsb.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lq.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lu.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/normaldistr.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/nsevd.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/qr.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/randomc.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/reflections.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/rotations.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sblas.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sevd.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/spddet.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studenttdistr.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studentttests.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/svd.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tdevd.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tridiagonal.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveDeformationModel.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveShapeModel.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXform.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXformUniformVolume.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientation.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientationBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkBitVector.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCompatibilityMatrix4x4.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicInterpolator.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicSpline.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridLocalCorrelation.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridMorphologicalOperators.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataTypeTraits.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDeformationField.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDetectedPhantomMagphanEMR051.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDirectionSet.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDistanceMap.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterMask.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterVolume.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToLandmarks.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToWarpXform.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToXformList.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitPolynomialToLandmarks.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitRigidToLandmarks.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToDeformationField.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToLandmarks.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToXformList.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitToXformListBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedArray.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedVector.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGaussianKernel.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGeneralLinearModel.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHashMapSTL.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHypothesisTests.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperation.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationBoundaryMap.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConnectedComponents.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConvertType.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropRegion.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropThreshold.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDistanceMap.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDownsample.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilate.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilateDistance.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationFlip.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationGaussFilter.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationHistogramEqualization.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationLaplaceFilter.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationMapValues.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationOtsuThreshold.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationPruneHistogram.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRegionFilter.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationReplace.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationResampleIsotropic.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRevert.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationScaleToRange.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetDataClass.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetPadding.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationThreshold.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageTemplate.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkInterpolator.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogram.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogramBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmark.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkList.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPair.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPairList.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLeastSquares.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLinearInterpolator.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLogHistogram.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMacros.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMagphanEMR051.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathFunctionWrappers.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix3x3.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix4x4.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMetaInformationObject.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkNearestNeighborInterpolator.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkParametricPlane.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomial.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomialXform.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkProbeInfo.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionIndexIterator.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionSphereIterator.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImage.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImageGradientField.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSegmentationLabel.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSincInterpolator.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXform.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXformUniformVolume.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSurfaceNormal.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSymmetricMatrix.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeFromSpaceAffine.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeToSpaceAffine.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformedVolumeAxes.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArray.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunction.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramEqualization.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramMatching.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypes.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformDistanceMap.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeGaussianFilter.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeHoughTransformSphere.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorPartialVolume.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeLaplaceFilter.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeMorphologicalOperators.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumePainter.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnionFind.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnits.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector3D.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeClipping.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeGridToGridLookup.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkWarpXform.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXform.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformList.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformListEntry.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformUniformVolume.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/doxygen.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil_Statistics.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray_Statistics.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAffineXformITKIO.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAnalyze.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamAffineXform.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamInput.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamOutput.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamPolynomialXform.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamStudyList.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkDICOM.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileConstHeader.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileFormat.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileHeader.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkGroupwiseRegistrationFunctionalIO.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageFileDICOM.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationApplyMask.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationMatchIntensities.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageStackDICOM.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkIO.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkListIO.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkPhantomIO.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSQLite.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSegmentationLabelIO.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSiemensCSAHeader.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSplineWarpXformITKIO.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudy.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyImageSet.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyList.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStream.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamInput.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamOutput.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamStudylist.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromFile.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromSlices.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromStudy.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeIO.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformIO.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformListIO.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/doxygen.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1_io_math.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineCongealingFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistration.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistrationCommandLine.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestDirectionOptimizer.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestNeighbourOptimizer.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkCongealingFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkEchoPlanarUnwarpFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistration.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistrationCommandLine.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationOutput.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkHausdorffDistance.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistration.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationCommandLine.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistration.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistration.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityJointHistogram.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasure.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureCR.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMI.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMSD.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNCC.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNMI.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureRMS.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLine.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLineBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctionalBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageXformDB.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMakeInitialAffineTransformation.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctionalBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizer.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizerBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkProtocolCallback.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationCallback.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationJointHistogram.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkScaleHistogramValueTrait.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSearchTrace.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetricElasticFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetryPlaneFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTemplateMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarity.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarityMemory.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctionalTemplate.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCorrRatio.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCrossCorrelation.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingElasticFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMeanSquaredDifference.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric_Type.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMutInf.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingNormMutInf.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelRegistration.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/doxygen.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctionalMetricData.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctionalMetricData.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeJacobian.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumePlain.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeReformat.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctionalThreadFunctions.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkAtlasSegmentation.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkDetectPhantomMagphanEMR051.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalVoting.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalWeighting.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationSTAPLE.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveraging.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationVoting.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkMultiChannelEntropyMinimizationIntensityCorrectionFunctional.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkOverlapMeasures.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelset.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLine.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLineBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/doxygen.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so -- Set runtime path of "/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionBox.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionGaussian.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkVolumeInjectionReconstruction.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Recon/doxygen.h -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.txx -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking.sh -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking_procmail.sh -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- Installing: /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/bin/cmtk make[2]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/obj-x86_64-linux-gnu' : # Remove not needed headers, cmake files etc rm -fr /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/include /usr/bin/find /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk -iname *.cmake -delete /usr/bin/find: paths must precede expression: `cmtkConfigureCPack.cmake' /usr/bin/find: possible unquoted pattern after predicate `-iname'? make[1]: [debian/rules:72: override_dh_auto_install] Error 1 (ignored) : # Prune duplicate docs rm -fr /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/cmtk/doc : # Generate manpages xvfb-run --auto-servernum --server-num=20 \ scripts/gen_manpages \ || dpkg -l xvfb | awk '/xvfb/{print ;}' | grep -q ubuntu /usr/bin/which: this version of `which' is deprecated; use `command -v' in scripts instead. /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh: 37: .: cannot open /usr/lib/cmtk/bin/cmtk_locking.sh: No such file Manpage for /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- FAILED /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion: 34: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file Manpage for /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- FAILED /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion: 34: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file Manpage for /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- FAILED /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion: 36: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file Manpage for /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- FAILED /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat: 36: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file Manpage for /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- FAILED /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- FAILED : # Above condition just to ignore unclean exit from xvfb on elderly broken ubuntus : # Cleaner solution patches are welcome! make[1]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg' dh_install -a cp --reflink=auto -a ./debian/cmtk.sh debian/cmtk/etc/cmtk/ install -d debian/.debhelper/generated/cmtk dh_installdocs -a install -d debian/cmtk/usr/share/doc/cmtk cp --reflink=auto -a ./README.txt debian/cmtk/usr/share/doc/cmtk cd './debian/upstream/..' && find 'upstream' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg/debian/cmtk/usr/share/doc/cmtk chmod -R u\+rw,go=rX debian/cmtk/usr/share/doc install -p -m0644 debian/README.Debian debian/cmtk/usr/share/doc/cmtk/README.Debian install -p -m0644 debian/TODO debian/cmtk/usr/share/doc/cmtk/TODO.Debian install -p -m0644 debian/copyright debian/cmtk/usr/share/doc/cmtk/copyright dh_installchangelogs -a install -p -m0644 ./CHANGELOG debian/cmtk/usr/share/doc/cmtk/changelog rm -f debian/cmtk.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg' dh_installman debian/manpages/* install -d debian/cmtk/usr/share/man/man1/ install -p -m0644 debian/manpages/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment.1 install -p -m0644 debian/manpages/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 install -p -m0644 debian/manpages/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 install -p -m0644 debian/manpages/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 install -p -m0644 debian/manpages/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 install -p -m0644 debian/manpages/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 install -p -m0644 debian/manpages/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 install -p -m0644 debian/manpages/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 install -p -m0644 debian/manpages/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 install -p -m0644 debian/manpages/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 install -p -m0644 debian/manpages/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 install -p -m0644 debian/manpages/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 install -p -m0644 debian/manpages/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 install -p -m0644 debian/manpages/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 install -p -m0644 debian/manpages/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 install -p -m0644 debian/manpages/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 install -p -m0644 debian/manpages/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 install -p -m0644 debian/manpages/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 install -p -m0644 debian/manpages/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 install -p -m0644 debian/manpages/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 install -p -m0644 debian/manpages/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 install -p -m0644 debian/manpages/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 install -p -m0644 debian/manpages/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 install -p -m0644 debian/manpages/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 install -p -m0644 debian/manpages/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 install -p -m0644 debian/manpages/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 install -p -m0644 debian/manpages/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 install -p -m0644 debian/manpages/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 install -p -m0644 debian/manpages/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 install -p -m0644 debian/manpages/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 install -p -m0644 debian/manpages/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 install -p -m0644 debian/manpages/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 install -p -m0644 debian/manpages/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 install -p -m0644 debian/manpages/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 install -p -m0644 debian/manpages/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 install -p -m0644 debian/manpages/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 install -p -m0644 debian/manpages/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 install -p -m0644 debian/manpages/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 install -p -m0644 debian/manpages/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 install -p -m0644 debian/manpages/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 install -p -m0644 debian/manpages/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 install -p -m0644 debian/manpages/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 install -p -m0644 debian/manpages/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 install -p -m0644 debian/manpages/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 install -p -m0644 debian/manpages/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 install -p -m0644 debian/manpages/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 install -p -m0644 debian/manpages/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 install -p -m0644 debian/manpages/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 install -p -m0644 debian/manpages/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 install -p -m0644 debian/manpages/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 install -p -m0644 debian/manpages/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 install -p -m0644 debian/manpages/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 install -p -m0644 debian/manpages/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 install -p -m0644 debian/manpages/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 install -p -m0644 debian/manpages/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 install -p -m0644 debian/manpages/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 install -p -m0644 debian/manpages/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 install -p -m0644 debian/manpages/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 install -p -m0644 debian/manpages/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 install -p -m0644 debian/manpages/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 install -p -m0644 debian/manpages/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 install -p -m0644 debian/manpages/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 install -p -m0644 debian/manpages/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 install -p -m0644 debian/manpages/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 install -p -m0644 debian/manpages/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 install -p -m0644 debian/manpages/cmtk-split.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 install -p -m0644 debian/manpages/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-statistics.1 install -p -m0644 debian/manpages/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 install -p -m0644 debian/manpages/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 install -p -m0644 debian/manpages/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 install -p -m0644 debian/manpages/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 install -p -m0644 debian/manpages/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 install -p -m0644 debian/manpages/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 install -p -m0644 debian/manpages/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 install -p -m0644 debian/manpages/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 install -p -m0644 debian/manpages/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 install -p -m0644 debian/manpages/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 install -p -m0644 debian/manpages/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 install -p -m0644 debian/manpages/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 install -p -m0644 debian/manpages/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 install -p -m0644 debian/manpages/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 install -p -m0644 debian/manpages/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 install -p -m0644 debian/manpages/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 install -p -m0644 debian/manpages/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 install -p -m0644 debian/manpages/cmtk.1 debian/cmtk/usr/share/man/man1/cmtk.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 mv debian/cmtk/usr/share/man/man1/cmtk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1 mv debian/cmtk/usr/share/man/man1/cmtk-probe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 mv debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 mv debian/cmtk/usr/share/man/man1/cmtk-reformatx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 mv debian/cmtk/usr/share/man/man1/cmtk-registration.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registration.1 mv debian/cmtk/usr/share/man/man1/cmtk-registrationx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 mv debian/cmtk/usr/share/man/man1/cmtk-regress.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-regress.1 mv debian/cmtk/usr/share/man/man1/cmtk-reorient.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 mv debian/cmtk/usr/share/man/man1/cmtk-sba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sba.1 mv debian/cmtk/usr/share/man/man1/cmtk-sbai.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sbai.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 mv debian/cmtk/usr/share/man/man1/cmtk-asegment.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 mv debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_images.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_images.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_labels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 mv debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 mv debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-convertx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convertx.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 mv debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 mv debian/cmtk/usr/share/man/man1/cmtk-mrbias.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 mv debian/cmtk/usr/share/man/man1/cmtk-overlap.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-overlap.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 mv debian/cmtk/usr/share/man/man1/cmtk-imagemath.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 mv debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 mv debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 mv debian/cmtk/usr/share/man/man1/cmtk-jidb.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-jidb.1 mv debian/cmtk/usr/share/man/man1/cmtk-levelset.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-levelset.1 mv debian/cmtk/usr/share/man/man1/cmtk-lmsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 mv debian/cmtk/usr/share/man/man1/cmtk-lsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1 mv debian/cmtk/usr/share/man/man1/cmtk-lvote.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lvote.1 mv debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-fib2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 mv debian/cmtk/usr/share/man/man1/cmtk-fibxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-film.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-film.1 mv debian/cmtk/usr/share/man/man1/cmtk-filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-filter.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-unsplit.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 mv debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 mv debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 mv debian/cmtk/usr/share/man/man1/cmtk-warpx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warpx.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 mv debian/cmtk/usr/share/man/man1/cmtk-dbtool.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 mv debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 mv debian/cmtk/usr/share/man/man1/cmtk-describe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-describe.1 mv debian/cmtk/usr/share/man/man1/cmtk-destripe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-destripe.1 mv debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 mv debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 mv debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 mv debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 mv debian/cmtk/usr/share/man/man1/cmtk-sequence.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1 mv debian/cmtk/usr/share/man/man1/cmtk-similarity.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-similarity.1 mv debian/cmtk/usr/share/man/man1/cmtk-split.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-split.1 mv debian/cmtk/usr/share/man/man1/cmtk-statistics.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 mv debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 mv debian/cmtk/usr/share/man/man1/cmtk-streamxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-sympl.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sympl.1 mv debian/cmtk/usr/share/man/man1/cmtk-symplx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-symplx.1 mv debian/cmtk/usr/share/man/man1/cmtk-ttest.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-ttest.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 mv debian/cmtk/usr/share/man/man1/cmtk-geomatch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 mv debian/cmtk/usr/share/man/man1/cmtk-glm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-glm.1 mv debian/cmtk/usr/share/man/man1/cmtk-gmm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gmm.1 mv debian/cmtk/usr/share/man/man1/cmtk-gregxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 mv debian/cmtk/usr/share/man/man1/cmtk-histogram.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-histogram.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 make[1]: Leaving directory '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/cmtk chmod a-x usr/share/doc/cmtk/changelog usr/share/doc/cmtk/changelog.Debian usr/share/doc/cmtk/changelog.Debian.amd64 usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1 gzip -9nf usr/share/doc/cmtk/changelog usr/share/doc/cmtk/changelog.Debian usr/share/doc/cmtk/changelog.Debian.amd64 usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1 cd '/build/cmtk-wFN1JA/cmtk-3.3.1p2+dfsg' dh_fixperms -a find debian/cmtk ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/cmtk/usr/share/doc -type f -a -true -a ! -regex 'debian/cmtk/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/cmtk/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/cmtk/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a dh_dwz -a install -d debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu dwz -mdebian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug -- debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so dwz: debian/cmtk/usr/lib/cmtk/libNrrdIO.so: DWARF compression not beneficial - old size 197266 new size 199190 objcopy --compress-debug-sections debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug dh_strip -a install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/90 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/90/8590482790b16a2090e23a805b7937b0e39bfe.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/90/8590482790b16a2090e23a805b7937b0e39bfe.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libNrrdIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/90/8590482790b16a2090e23a805b7937b0e39bfe.debug debian/cmtk/usr/lib/cmtk/libNrrdIO.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/54 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/54/b68bd411aab483caa2359f5674fc976c7324c5.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/54/b68bd411aab483caa2359f5674fc976c7324c5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkMxml.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/54/b68bd411aab483caa2359f5674fc976c7324c5.debug debian/cmtk/usr/lib/cmtk/libcmtkMxml.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/332893e809fd24ddde16d1ddd450594171c861.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/332893e809fd24ddde16d1ddd450594171c861.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSystem.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/332893e809fd24ddde16d1ddd450594171c861.debug debian/cmtk/usr/lib/cmtk/libcmtkSystem.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/4236fbe6dceaac43fc6ee8f62f4a509de89823.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/4236fbe6dceaac43fc6ee8f62f4a509de89823.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/4236fbe6dceaac43fc6ee8f62f4a509de89823.debug debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/42e4d35d0a9e39c7169f4b550f47386f40661f.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/42e4d35d0a9e39c7169f4b550f47386f40661f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkBase.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f9/42e4d35d0a9e39c7169f4b550f47386f40661f.debug debian/cmtk/usr/lib/cmtk/libcmtkBase.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40/2e6281a61f91a8af7ee5c69e0e8f53bb75cd61.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40/2e6281a61f91a8af7ee5c69e0e8f53bb75cd61.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40/2e6281a61f91a8af7ee5c69e0e8f53bb75cd61.debug debian/cmtk/usr/lib/cmtk/libcmtkIO.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/19eec9016eaa5a1ea731ffd22e1680317fc095.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/19eec9016eaa5a1ea731ffd22e1680317fc095.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/19eec9016eaa5a1ea731ffd22e1680317fc095.debug debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/57aedc1d2c74eafc650f4d48ea59f2634c174c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/57aedc1d2c74eafc650f4d48ea59f2634c174c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/57aedc1d2c74eafc650f4d48ea59f2634c174c.debug debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/6f4611bfb1d6b5fb5998a601f219db82899d9b.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/6f4611bfb1d6b5fb5998a601f219db82899d9b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRecon.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/6f4611bfb1d6b5fb5998a601f219db82899d9b.debug debian/cmtk/usr/lib/cmtk/libcmtkRecon.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/d6d52451f4ac48ff8556b80697e88e65ca78ae.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/d6d52451f4ac48ff8556b80697e88e65ca78ae.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/avg_adm objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/d6d52451f4ac48ff8556b80697e88e65ca78ae.debug debian/cmtk/usr/lib/cmtk/bin/avg_adm install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1c objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/describe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1c/c29dabf1afbdae00b96e3feb77f760d6e69c61.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1c/c29dabf1afbdae00b96e3feb77f760d6e69c61.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/describe objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1c/c29dabf1afbdae00b96e3feb77f760d6e69c61.debug debian/cmtk/usr/lib/cmtk/bin/describe install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f4 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f4/0c472c3b4c61867c684f7597fd99fb2bc39bb9.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f4/0c472c3b4c61867c684f7597fd99fb2bc39bb9.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_init objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f4/0c472c3b4c61867c684f7597fd99fb2bc39bb9.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_init install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3e objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3e/135d798603bca5cd2f82ef75ad8a2ad3a18b95.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3e/135d798603bca5cd2f82ef75ad8a2ad3a18b95.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_affine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3e/135d798603bca5cd2f82ef75ad8a2ad3a18b95.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_affine install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7/7ca91d439402a8a8b22a69ffd9988acec437db.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7/7ca91d439402a8a8b22a69ffd9988acec437db.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_warp objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7/7ca91d439402a8a8b22a69ffd9988acec437db.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_warp install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e/8ac2c2e0f150664d2a1c6172df5051e98fd9cf.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e/8ac2c2e0f150664d2a1c6172df5051e98fd9cf.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e/8ac2c2e0f150664d2a1c6172df5051e98fd9cf.debug debian/cmtk/usr/lib/cmtk/bin/asegment install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0c objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0c/f6ace814c416a27ace10fc78746828e3da4014.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0c/f6ace814c416a27ace10fc78746828e3da4014.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_affine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0c/f6ace814c416a27ace10fc78746828e3da4014.debug debian/cmtk/usr/lib/cmtk/bin/average_affine install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_images debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44/abb43bddd7cf114e503f2099b1222f68430491.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44/abb43bddd7cf114e503f2099b1222f68430491.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_images objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/44/abb43bddd7cf114e503f2099b1222f68430491.debug debian/cmtk/usr/lib/cmtk/bin/average_images install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cd objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_labels debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cd/0e4362a2c6169c028000232fb7e58a05ed3015.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cd/0e4362a2c6169c028000232fb7e58a05ed3015.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_labels objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cd/0e4362a2c6169c028000232fb7e58a05ed3015.debug debian/cmtk/usr/lib/cmtk/bin/average_labels install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e5 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e5/9f073604b5c69eb0d706adf45b691609914e34.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e5/9f073604b5c69eb0d706adf45b691609914e34.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/concat_affine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e5/9f073604b5c69eb0d706adf45b691609914e34.debug debian/cmtk/usr/lib/cmtk/bin/concat_affine objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convertx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/54/67c9092db0a74d98b16073fba2b3984c7cee61.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/54/67c9092db0a74d98b16073fba2b3984c7cee61.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convertx objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/54/67c9092db0a74d98b16073fba2b3984c7cee61.debug debian/cmtk/usr/lib/cmtk/bin/convertx objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/25845c3df7795a2c2d4369cc2a8b40fef25ded.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/25845c3df7795a2c2d4369cc2a8b40fef25ded.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convert_warp objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/25845c3df7795a2c2d4369cc2a8b40fef25ded.debug debian/cmtk/usr/lib/cmtk/bin/convert_warp install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/destripe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48/8c2af53de978f69eb3e469c14876aaa1bb5e24.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48/8c2af53de978f69eb3e469c14876aaa1bb5e24.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/destripe objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/48/8c2af53de978f69eb3e469c14876aaa1bb5e24.debug debian/cmtk/usr/lib/cmtk/bin/destripe install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/f853ac39970ae1f828c83ffdfd0ebb9695337f.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/f853ac39970ae1f828c83ffdfd0ebb9695337f.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dof2mat objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/f853ac39970ae1f828c83ffdfd0ebb9695337f.debug debian/cmtk/usr/lib/cmtk/bin/dof2mat install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d1 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d1/135aefd7536ef880c675107604cef3ed53cac4.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d1/135aefd7536ef880c675107604cef3ed53cac4.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d1/135aefd7536ef880c675107604cef3ed53cac4.debug debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/5d8b35df0ac857ca19d14e7297bc3be91db54c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/5d8b35df0ac857ca19d14e7297bc3be91db54c.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/epiunwarp objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/5d8b35df0ac857ca19d14e7297bc3be91db54c.debug debian/cmtk/usr/lib/cmtk/bin/epiunwarp install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fibxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/dac49f608df84876de0f4eb4a197bcc08c5e28.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/dac49f608df84876de0f4eb4a197bcc08c5e28.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fibxform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/dac49f608df84876de0f4eb4a197bcc08c5e28.debug debian/cmtk/usr/lib/cmtk/bin/fibxform install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fib2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/30a4ac3658886e0b68af115f40a3b0450bab53.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/30a4ac3658886e0b68af115f40a3b0450bab53.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fib2image objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/30a4ac3658886e0b68af115f40a3b0450bab53.debug debian/cmtk/usr/lib/cmtk/bin/fib2image install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/film debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/16e654e3a1a2f5f4db2bc90a98e66f8aacee24.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/16e654e3a1a2f5f4db2bc90a98e66f8aacee24.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/film objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/16e654e3a1a2f5f4db2bc90a98e66f8aacee24.debug debian/cmtk/usr/lib/cmtk/bin/film install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3f objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/filter debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3f/af07b887fb3f0c3e08614b77de299e4113455a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3f/af07b887fb3f0c3e08614b77de299e4113455a.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/filter objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3f/af07b887fb3f0c3e08614b77de299e4113455a.debug debian/cmtk/usr/lib/cmtk/bin/filter install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2/43fce250865cfed1b76addc6cf2026633e6571.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2/43fce250865cfed1b76addc6cf2026633e6571.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2/43fce250865cfed1b76addc6cf2026633e6571.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/15 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/15/03ffe44e7c5f842083bffa1700fc1af6be3026.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/15/03ffe44e7c5f842083bffa1700fc1af6be3026.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/15/03ffe44e7c5f842083bffa1700fc1af6be3026.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6e objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6e/c0b956f2acbcbe52af121e7cce49a030d6eab9.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6e/c0b956f2acbcbe52af121e7cce49a030d6eab9.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6e/c0b956f2acbcbe52af121e7cce49a030d6eab9.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b1 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b1/7a19e8041e8b137b2e06f0d37675da9f981a32.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b1/7a19e8041e8b137b2e06f0d37675da9f981a32.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b1/7a19e8041e8b137b2e06f0d37675da9f981a32.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c/e29d49f87ba1e1382ffbbba6d17b0bdd3593b9.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c/e29d49f87ba1e1382ffbbba6d17b0bdd3593b9.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c/e29d49f87ba1e1382ffbbba6d17b0bdd3593b9.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/geomatch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99/2b75b60015372102d8983ff05c4f55cbd7c00b.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99/2b75b60015372102d8983ff05c4f55cbd7c00b.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/geomatch objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99/2b75b60015372102d8983ff05c4f55cbd7c00b.debug debian/cmtk/usr/lib/cmtk/bin/geomatch install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c9 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/glm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c9/7e0b7aa7eb455734a7b50b6a35d0405210fcd5.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c9/7e0b7aa7eb455734a7b50b6a35d0405210fcd5.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/glm objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c9/7e0b7aa7eb455734a7b50b6a35d0405210fcd5.debug debian/cmtk/usr/lib/cmtk/bin/glm install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gmm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c7/4013e2b9d9c92d13d6875413b9dfa4040be4b5.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c7/4013e2b9d9c92d13d6875413b9dfa4040be4b5.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gmm objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c7/4013e2b9d9c92d13d6875413b9dfa4040be4b5.debug debian/cmtk/usr/lib/cmtk/bin/gmm objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gregxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/bfa1bf81f52455ca1b6bfb934328a8ed2b1b82.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/bfa1bf81f52455ca1b6bfb934328a8ed2b1b82.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gregxform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/bfa1bf81f52455ca1b6bfb934328a8ed2b1b82.debug debian/cmtk/usr/lib/cmtk/bin/gregxform install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/62 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/62/01b84d5188c56a7f643134c608d30503034f27.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/62/01b84d5188c56a7f643134c608d30503034f27.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/hausdorff objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/62/01b84d5188c56a7f643134c608d30503034f27.debug debian/cmtk/usr/lib/cmtk/bin/hausdorff install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7e objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/histogram debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7e/e2d5c8cf3fd63ce1f9cf74aadde5517337b413.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7e/e2d5c8cf3fd63ce1f9cf74aadde5517337b413.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/histogram objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7e/e2d5c8cf3fd63ce1f9cf74aadde5517337b413.debug debian/cmtk/usr/lib/cmtk/bin/histogram install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b3 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/imagemath debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b3/8843559356ae83f1ef07d16e75c87e3de32f42.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b3/8843559356ae83f1ef07d16e75c87e3de32f42.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/imagemath objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b3/8843559356ae83f1ef07d16e75c87e3de32f42.debug debian/cmtk/usr/lib/cmtk/bin/imagemath install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/51 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/51/8ee40f51b9d0358a388088f28851bd8acd7dc0.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/51/8ee40f51b9d0358a388088f28851bd8acd7dc0.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/51/8ee40f51b9d0358a388088f28851bd8acd7dc0.debug debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/jidb debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cd/aebd6a8edc637a29395a935fc586c4214435ef.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cd/aebd6a8edc637a29395a935fc586c4214435ef.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/jidb objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cd/aebd6a8edc637a29395a935fc586c4214435ef.debug debian/cmtk/usr/lib/cmtk/bin/jidb install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/levelset debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96/7d4e0e81c978c0e7af831645866adb29ec986d.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96/7d4e0e81c978c0e7af831645866adb29ec986d.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/levelset objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/96/7d4e0e81c978c0e7af831645866adb29ec986d.debug debian/cmtk/usr/lib/cmtk/bin/levelset install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fe objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fe/54d477eba419ad3c540f332660f9cc7d6703b4.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fe/54d477eba419ad3c540f332660f9cc7d6703b4.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lsba objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fe/54d477eba419ad3c540f332660f9cc7d6703b4.debug debian/cmtk/usr/lib/cmtk/bin/lsba install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/be objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lmsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/be/d09906c263120524080f19862d1cd6d9a3a64c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/be/d09906c263120524080f19862d1cd6d9a3a64c.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lmsba objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/be/d09906c263120524080f19862d1cd6d9a3a64c.debug debian/cmtk/usr/lib/cmtk/bin/lmsba install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lvote debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/e6a49c12b544b7945329ba9560d405450de895.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/e6a49c12b544b7945329ba9560d405450de895.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lvote objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/e6a49c12b544b7945329ba9560d405450de895.debug debian/cmtk/usr/lib/cmtk/bin/lvote install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/0b65fe16ffef9f2d9e132588276afe91e13123.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/0b65fe16ffef9f2d9e132588276afe91e13123.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/make_initial_affine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/0b65fe16ffef9f2d9e132588276afe91e13123.debug debian/cmtk/usr/lib/cmtk/bin/make_initial_affine install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f6 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f6/b763c836e62e174a689f94fb0ce9df15547063.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f6/b763c836e62e174a689f94fb0ce9df15547063.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mat2dof objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f6/b763c836e62e174a689f94fb0ce9df15547063.debug debian/cmtk/usr/lib/cmtk/bin/mat2dof install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/25 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/25/8f9b5f988319ecdf6df5a895c7cbaad2a71365.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/25/8f9b5f988319ecdf6df5a895c7cbaad2a71365.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/25/8f9b5f988319ecdf6df5a895c7cbaad2a71365.debug debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/19753cc638ea794a59e9cbb839053b12d0b1f8.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/19753cc638ea794a59e9cbb839053b12d0b1f8.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/19753cc638ea794a59e9cbb839053b12d0b1f8.debug debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68/ebf3c97f779a1e6b6e9b8eb9fe31ba27a5f3cc.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68/ebf3c97f779a1e6b6e9b8eb9fe31ba27a5f3cc.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68/ebf3c97f779a1e6b6e9b8eb9fe31ba27a5f3cc.debug debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55/4b830df22fcc8f9e364697778039305b5abd32.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55/4b830df22fcc8f9e364697778039305b5abd32.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/55/4b830df22fcc8f9e364697778039305b5abd32.debug debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mrbias debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e/258581e048a0dc88a408d3b354f6975a20cd84.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e/258581e048a0dc88a408d3b354f6975a20cd84.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mrbias objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e/258581e048a0dc88a408d3b354f6975a20cd84.debug debian/cmtk/usr/lib/cmtk/bin/mrbias objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/overlap debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99/f043cb30c9da2a175564b964338056aee5aa3a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99/f043cb30c9da2a175564b964338056aee5aa3a.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/overlap objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99/f043cb30c9da2a175564b964338056aee5aa3a.debug debian/cmtk/usr/lib/cmtk/bin/overlap install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/00 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/probe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/00/7b5f8f82ae7ff7aecf0bb7b35b6c9d7e4ab351.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/00/7b5f8f82ae7ff7aecf0bb7b35b6c9d7e4ab351.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/probe objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/00/7b5f8f82ae7ff7aecf0bb7b35b6c9d7e4ab351.debug debian/cmtk/usr/lib/cmtk/bin/probe install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/01d6a004258f04ca456b3aade028391297df8c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/01d6a004258f04ca456b3aade028391297df8c.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/pxsearch objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/01d6a004258f04ca456b3aade028391297df8c.debug debian/cmtk/usr/lib/cmtk/bin/pxsearch install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e0 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reformatx 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--add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/3b22b57d09dfcf49cb4ac33536963e60b09d5e.debug debian/cmtk/usr/lib/cmtk/bin/registration install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registrationx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29/01b17548a9c2e63e9350a13e749011230eaa4f.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29/01b17548a9c2e63e9350a13e749011230eaa4f.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registrationx objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29/01b17548a9c2e63e9350a13e749011230eaa4f.debug debian/cmtk/usr/lib/cmtk/bin/registrationx install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/71 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/regress debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/71/701033e32993df93bea97685a9fb7834928122.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/71/701033e32993df93bea97685a9fb7834928122.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/regress objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/71/701033e32993df93bea97685a9fb7834928122.debug debian/cmtk/usr/lib/cmtk/bin/regress install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reorient debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/976b4296955a39996475d233df13959bed1809.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/976b4296955a39996475d233df13959bed1809.debug strip --remove-section=.comment --remove-section=.note 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debian/cmtk/usr/lib/cmtk/bin/sbai debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/26/c39999d9724423303e4fb9ea41f04555752bfa.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/26/c39999d9724423303e4fb9ea41f04555752bfa.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sbai objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/26/c39999d9724423303e4fb9ea41f04555752bfa.debug debian/cmtk/usr/lib/cmtk/bin/sbai install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sequence debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35/40a4342730c6f6053e93d3b313e2e833e8dcce.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35/40a4342730c6f6053e93d3b313e2e833e8dcce.debug strip --remove-section=.comment --remove-section=.note 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debian/cmtk/usr/lib/cmtk/bin/split debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5f/b87ae466bada038a983ec2d5a6ba710404d207.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5f/b87ae466bada038a983ec2d5a6ba710404d207.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/split objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5f/b87ae466bada038a983ec2d5a6ba710404d207.debug debian/cmtk/usr/lib/cmtk/bin/split objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/statistics debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/71/977edd345199b6056fe59a4c180f308062cf72.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/71/977edd345199b6056fe59a4c180f308062cf72.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/statistics objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/71/977edd345199b6056fe59a4c180f308062cf72.debug debian/cmtk/usr/lib/cmtk/bin/statistics install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6/2a77cdc01d3230717bf087a8ffb4516e5d4dee.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6/2a77cdc01d3230717bf087a8ffb4516e5d4dee.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/stream_pixels objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a6/2a77cdc01d3230717bf087a8ffb4516e5d4dee.debug debian/cmtk/usr/lib/cmtk/bin/stream_pixels objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/streamxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1c/1fdaadf0f80b2cb845b9144369e4aeb00ae6ba.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1c/1fdaadf0f80b2cb845b9144369e4aeb00ae6ba.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/streamxform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1c/1fdaadf0f80b2cb845b9144369e4aeb00ae6ba.debug debian/cmtk/usr/lib/cmtk/bin/streamxform install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sympl debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/9f79f0de53eec4b8747ca2e9f3c2c3b057a6e3.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/9f79f0de53eec4b8747ca2e9f3c2c3b057a6e3.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sympl objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/9f79f0de53eec4b8747ca2e9f3c2c3b057a6e3.debug debian/cmtk/usr/lib/cmtk/bin/sympl install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/symplx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/d047cf9223ff99173086a2adae7c7dfa3368d2.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/d047cf9223ff99173086a2adae7c7dfa3368d2.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/symplx objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/d047cf9223ff99173086a2adae7c7dfa3368d2.debug debian/cmtk/usr/lib/cmtk/bin/symplx install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5d objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/ttest debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5d/a53b96f7c56a1b89cf40668701ae1612512fb1.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5d/a53b96f7c56a1b89cf40668701ae1612512fb1.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/ttest objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5d/a53b96f7c56a1b89cf40668701ae1612512fb1.debug debian/cmtk/usr/lib/cmtk/bin/ttest install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ce objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unsplit debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ce/1fcda9c5c7c5891284ead67be303362c4c9c24.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ce/1fcda9c5c7c5891284ead67be303362c4c9c24.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/unsplit objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ce/1fcda9c5c7c5891284ead67be303362c4c9c24.debug debian/cmtk/usr/lib/cmtk/bin/unsplit objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/aa229025b304569c0eee42fa7e9f2e930008e5.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/aa229025b304569c0eee42fa7e9f2e930008e5.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/aa229025b304569c0eee42fa7e9f2e930008e5.debug debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/42 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vol2csv 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--add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b7/fde9dcf8dc3d149e024d84009062822140598c.debug debian/cmtk/usr/lib/cmtk/bin/volume_injection install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34/78ce3c052c4859c0a1e288df6dc0acae192e70.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34/78ce3c052c4859c0a1e288df6dc0acae192e70.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/34/78ce3c052c4859c0a1e288df6dc0acae192e70.debug debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c6 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c6/70967d84ea68ec6e10577a5d89a0f2b09fa966.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c6/70967d84ea68ec6e10577a5d89a0f2b09fa966.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/vtkxform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c6/70967d84ea68ec6e10577a5d89a0f2b09fa966.debug debian/cmtk/usr/lib/cmtk/bin/vtkxform objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/0f9c6bd2a0eb49f73c543d0ca5ef535e18de6c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/0f9c6bd2a0eb49f73c543d0ca5ef535e18de6c.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/0f9c6bd2a0eb49f73c543d0ca5ef535e18de6c.debug debian/cmtk/usr/lib/cmtk/bin/warp objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warpx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/42/837000ed40b5c213fc4f7066dc6f36a7278333.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/42/837000ed40b5c213fc4f7066dc6f36a7278333.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warpx objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/42/837000ed40b5c213fc4f7066dc6f36a7278333.debug debian/cmtk/usr/lib/cmtk/bin/warpx install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/eb objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/eb/347aa99a9a478b594cee4a9b98954eb6535a39.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/eb/347aa99a9a478b594cee4a9b98954eb6535a39.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp2ps objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/eb/347aa99a9a478b594cee4a9b98954eb6535a39.debug debian/cmtk/usr/lib/cmtk/bin/warp2ps install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/df objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/df/896c317fddb9597ccee98b4f5e28fd5d469b3a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/df/896c317fddb9597ccee98b4f5e28fd5d469b3a.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2dfield objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/df/896c317fddb9597ccee98b4f5e28fd5d469b3a.debug debian/cmtk/usr/lib/cmtk/bin/xform2dfield install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/41 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/41/05f805fbd3934366d0a9b32379158ae37f6fe8.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/41/05f805fbd3934366d0a9b32379158ae37f6fe8.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2itk objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/41/05f805fbd3934366d0a9b32379158ae37f6fe8.debug debian/cmtk/usr/lib/cmtk/bin/xform2itk install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/11acabfc3e62318b11a8a40ced6dbc4a8cd1d8.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/11acabfc3e62318b11a8a40ced6dbc4a8cd1d8.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2scalar objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/11acabfc3e62318b11a8a40ced6dbc4a8cd1d8.debug debian/cmtk/usr/lib/cmtk/bin/xform2scalar install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ed objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dbtool debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ed/b2133db03b10737bb51bbb1308abd1d64cf301.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ed/b2133db03b10737bb51bbb1308abd1d64cf301.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dbtool objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ed/b2133db03b10737bb51bbb1308abd1d64cf301.debug debian/cmtk/usr/lib/cmtk/bin/dbtool install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/bf4e7c82527b3ff8718a6e17b716acd8bff7d5.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/bf4e7c82527b3ff8718a6e17b716acd8bff7d5.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/bf4e7c82527b3ff8718a6e17b716acd8bff7d5.debug debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/18 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/18/6a8240bab7fb187ab3a5e4ff4611483e5f00c4.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/18/6a8240bab7fb187ab3a5e4ff4611483e5f00c4.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcaffine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/18/6a8240bab7fb187ab3a5e4ff4611483e5f00c4.debug debian/cmtk/usr/lib/cmtk/bin/mcaffine objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/eb7d6abee4ecbc140a57a2c06f9a8060657cb3.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/eb7d6abee4ecbc140a57a2c06f9a8060657cb3.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcwarp objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/eb7d6abee4ecbc140a57a2c06f9a8060657cb3.debug debian/cmtk/usr/lib/cmtk/bin/mcwarp install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c/860aa6efee5572580336d13f5f85ad1dda7906.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c/860aa6efee5572580336d13f5f85ad1dda7906.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dcm2image objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4c/860aa6efee5572580336d13f5f85ad1dda7906.debug debian/cmtk/usr/lib/cmtk/bin/dcm2image install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/1e05b7f44ca7e6898af0ea13a328ffe4ab751e.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/1e05b7f44ca7e6898af0ea13a328ffe4ab751e.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/1e05b7f44ca7e6898af0ea13a328ffe4ab751e.debug debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40/92280429cc9c648b4e8c500f4fd619741d9726.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40/92280429cc9c648b4e8c500f4fd619741d9726.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40/92280429cc9c648b4e8c500f4fd619741d9726.debug debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/cmtk/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/cmtk/usr/lib/debug install -d debian/.debhelper/cmtk/dbgsym-root/usr/share/doc ln -s cmtk debian/.debhelper/cmtk/dbgsym-root/usr/share/doc/cmtk-dbgsym dh_makeshlibs -a rm -f debian/cmtk/DEBIAN/shlibs dh_shlibdeps -a install -d debian/cmtk/DEBIAN dpkg-shlibdeps -Tdebian/cmtk.substvars debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkMxml.so contains an unresolvable reference to symbol pthread_key_delete: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libNrrdIO.so contains an unresolvable reference to symbol sqrt: it's probably a plugin dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) dh_installdeb -a find debian/cmtk/etc -type f -printf '/etc/%P ' | LC_ALL=C sort >> debian/cmtk/DEBIAN/conffiles chmod 0644 -- debian/cmtk/DEBIAN/conffiles dh_gencontrol -a echo misc:Depends= >> debian/cmtk.substvars echo misc:Pre-Depends= >> debian/cmtk.substvars install -d debian/.debhelper/cmtk/dbgsym-root/DEBIAN dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/.debhelper/cmtk/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=cmtk-dbgsym "-DDepends=cmtk (= \${binary:Version})" "-DDescription=debug symbols for cmtk" "-DBuild-Ids=007b5f8f82ae7ff7aecf0bb7b35b6c9d7e4ab351 03c7df495cafdc10369ba169fff3261220eb1334 0cf6ace814c416a27ace10fc78746828e3da4014 1316e654e3a1a2f5f4db2bc90a98e66f8aacee24 1503ffe44e7c5f842083bffa1700fc1af6be3026 186a8240bab7fb187ab3a5e4ff4611483e5f00c4 1abf4e7c82527b3ff8718a6e17b716acd8bff7d5 1c1fdaadf0f80b2cb845b9144369e4aeb00ae6ba 1cc29dabf1afbdae00b96e3feb77f760d6e69c61 1d30a4ac3658886e0b68af115f40a3b0450bab53 1dbfa1bf81f52455ca1b6bfb934328a8ed2b1b82 22332893e809fd24ddde16d1ddd450594171c861 22aa229025b304569c0eee42fa7e9f2e930008e5 258f9b5f988319ecdf6df5a895c7cbaad2a71365 26c39999d9724423303e4fb9ea41f04555752bfa 2901b17548a9c2e63e9350a13e749011230eaa4f 2e8ac2c2e0f150664d2a1c6172df5051e98fd9cf 3478ce3c052c4859c0a1e288df6dc0acae192e70 3540a4342730c6f6053e93d3b313e2e833e8dcce 3619eec9016eaa5a1ea731ffd22e1680317fc095 3625845c3df7795a2c2d4369cc2a8b40fef25ded 3e135d798603bca5cd2f82ef75ad8a2ad3a18b95 3faf07b887fb3f0c3e08614b77de299e4113455a 402e6281a61f91a8af7ee5c69e0e8f53bb75cd61 4092280429cc9c648b4e8c500f4fd619741d9726 4105f805fbd3934366d0a9b32379158ae37f6fe8 4214a0d2e75b9dfdc180329f6b264ef77e0d6de8 42837000ed40b5c213fc4f7066dc6f36a7278333 44abb43bddd7cf114e503f2099b1222f68430491 47d047cf9223ff99173086a2adae7c7dfa3368d2 488c2af53de978f69eb3e469c14876aaa1bb5e24 4c860aa6efee5572580336d13f5f85ad1dda7906 4dea5a1c2c05dfa86dea1d41095d55102c906811 4fdac49f608df84876de0f4eb4a197bcc08c5e28 518ee40f51b9d0358a388088f28851bd8acd7dc0 5467c9092db0a74d98b16073fba2b3984c7cee61 54b68bd411aab483caa2359f5674fc976c7324c5 554b830df22fcc8f9e364697778039305b5abd32 5a0b65fe16ffef9f2d9e132588276afe91e13123 5a0f9c6bd2a0eb49f73c543d0ca5ef535e18de6c 5c01d6a004258f04ca456b3aade028391297df8c 5da53b96f7c56a1b89cf40668701ae1612512fb1 5fb87ae466bada038a983ec2d5a6ba710404d207 6201b84d5188c56a7f643134c608d30503034f27 651e05b7f44ca7e6898af0ea13a328ffe4ab751e 68ebf3c97f779a1e6b6e9b8eb9fe31ba27a5f3cc 6ec0b956f2acbcbe52af121e7cce49a030d6eab9 71701033e32993df93bea97685a9fb7834928122 71977edd345199b6056fe59a4c180f308062cf72 79976b4296955a39996475d233df13959bed1809 7ee2d5c8cf3fd63ce1f9cf74aadde5517337b413 804236fbe6dceaac43fc6ee8f62f4a509de89823 8a11acabfc3e62318b11a8a40ced6dbc4a8cd1d8 8e258581e048a0dc88a408d3b354f6975a20cd84 908590482790b16a2090e23a805b7937b0e39bfe 967d4e0e81c978c0e7af831645866adb29ec986d 992b75b60015372102d8983ff05c4f55cbd7c00b 99f043cb30c9da2a175564b964338056aee5aa3a 9ce29d49f87ba1e1382ffbbba6d17b0bdd3593b9 a3e6a49c12b544b7945329ba9560d405450de895 a59f79f0de53eec4b8747ca2e9f3c2c3b057a6e3 a62a77cdc01d3230717bf087a8ffb4516e5d4dee a75d8b35df0ac857ca19d14e7297bc3be91db54c b17a19e8041e8b137b2e06f0d37675da9f981a32 b38843559356ae83f1ef07d16e75c87e3de32f42 b7fde9dcf8dc3d149e024d84009062822140598c bed09906c263120524080f19862d1cd6d9a3a64c c13b22b57d09dfcf49cb4ac33536963e60b09d5e c26f4611bfb1d6b5fb5998a601f219db82899d9b c670967d84ea68ec6e10577a5d89a0f2b09fa966 c74013e2b9d9c92d13d6875413b9dfa4040be4b5 c97e0b7aa7eb455734a7b50b6a35d0405210fcd5 cd0e4362a2c6169c028000232fb7e58a05ed3015 cdaebd6a8edc637a29395a935fc586c4214435ef ce1fcda9c5c7c5891284ead67be303362c4c9c24 d1135aefd7536ef880c675107604cef3ed53cac4 d6d6d52451f4ac48ff8556b80697e88e65ca78ae df896c317fddb9597ccee98b4f5e28fd5d469b3a e0c5369a5c138e3ad9d93680f3baddea14c831a8 e59f073604b5c69eb0d706adf45b691609914e34 e77ca91d439402a8a8b22a69ffd9988acec437db eb347aa99a9a478b594cee4a9b98954eb6535a39 edb2133db03b10737bb51bbb1308abd1d64cf301 f019753cc638ea794a59e9cbb839053b12d0b1f8 f0eb7d6abee4ecbc140a57a2c06f9a8060657cb3 f243fce250865cfed1b76addc6cf2026633e6571 f3f853ac39970ae1f828c83ffdfd0ebb9695337f f40c472c3b4c61867c684f7597fd99fb2bc39bb9 f557aedc1d2c74eafc650f4d48ea59f2634c174c f6b763c836e62e174a689f94fb0ce9df15547063 f942e4d35d0a9e39c7169f4b550f47386f40661f fe54d477eba419ad3c540f332660f9cc7d6703b4" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/cmtk chmod 0644 -- debian/cmtk/DEBIAN/control dh_md5sums -a cd debian/cmtk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/cmtk/DEBIAN/md5sums cd debian/.debhelper/cmtk/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/cmtk .. dpkg-deb --root-owner-group --build debian/.debhelper/cmtk/dbgsym-root .. dpkg-deb: building package 'cmtk' in '../cmtk_3.3.1p2+dfsg-1+b1_amd64.deb'. dpkg-deb: building package 'cmtk-dbgsym' in '../cmtk-dbgsym_3.3.1p2+dfsg-1+b1_amd64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../cmtk_3.3.1p2+dfsg-1+b1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/cmtk-wFN1JA /tmp/cmtk-3.3.1p2+dfsg-1+b1em4pcdub I: cleaning package lists and apt cache... W: deleting files in /tmp: .X11-unix I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.7k8bh9j78O... I: success in 4398.6299 seconds md5: cmtk-dbgsym_3.3.1p2+dfsg-1+b1_amd64.deb: OK md5: Value of 'md5' differs for cmtk_3.3.1p2+dfsg-1+b1_amd64.deb md5: Size differs for cmtk_3.3.1p2+dfsg-1+b1_amd64.deb sha1: cmtk-dbgsym_3.3.1p2+dfsg-1+b1_amd64.deb: OK sha1: Value of 'sha1' differs for cmtk_3.3.1p2+dfsg-1+b1_amd64.deb sha1: Size differs for cmtk_3.3.1p2+dfsg-1+b1_amd64.deb sha256: cmtk-dbgsym_3.3.1p2+dfsg-1+b1_amd64.deb: OK sha256: Value of 'sha256' differs for cmtk_3.3.1p2+dfsg-1+b1_amd64.deb sha256: Size differs for cmtk_3.3.1p2+dfsg-1+b1_amd64.deb Checksums: FAIL diffoscope run passed