Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/b/biomaj3/biomaj3_3.1.22-1_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/biomaj3-3.1.22-1t9fwz395/biomaj3_3.1.22-1_all.buildinfo Get source package info: biomaj3=3.1.22-1 Source URL: http://snapshot.notset.fr/mr/package/biomaj3/3.1.22-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6.1 binutils=2.38.50.20220627-1 binutils-common=2.38.50.20220627-1 binutils-x86-64-linux-gnu=2.38.50.20220627-1 bsdextrautils=2.38-4 bsdutils=1:2.38-4 build-essential=12.9 bzip2=1.0.8-5 ca-certificates=20211016 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.3.0-3 dash=0.5.11+git20210903+057cd650a4ed-8 debconf=1.5.79 debhelper=13.7.1 debianutils=5.7-0.2 dh-autoreconf=20 dh-python=5.20220403 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.8 dpkg-dev=1.21.8 dwz=0.14-1 file=1:5.41-4 findutils=4.9.0-3 g++=4:11.2.0-2 g++-11=11.3.0-3 gcc=4:11.2.0-2 gcc-11=11.3.0-3 gcc-11-base=11.3.0-3 gcc-12-base=12.1.0-4 gettext=0.21-6 gettext-base=0.21-6 grep=3.7-1 groff-base=1.22.4-8 gzip=1.12-1 hostname=3.23 init-system-helpers=1.63 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libarchive-zip-perl=1.68-1 libasan6=11.3.0-3 libatomic1=12.1.0-4 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libbinutils=2.38.50.20220627-1 libblkid1=2.38-4 libbrotli1=1.0.9-2+b3 libbz2-1.0=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dev=2.33-7 libcap-ng0=0.8.3-1 libcap2=1:2.44-1 libcc1-0=12.1.0-4 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38.50.20220627-1 libctf0=2.38.50.20220627-1 libcurl3-gnutls=7.84.0-1 libdb5.3=5.3.28+dfsg1-0.9 libdebconfclient0=0.263 libdebhelper-perl=13.7.1 libdpkg-perl=1.21.8 libelf1=0.187-1 libexpat1=2.4.8-1 libffi8=3.4.2-4 libfile-stripnondeterminism-perl=1.13.0-1 libgcc-11-dev=11.3.0-3 libgcc-s1=12.1.0-4 libgcrypt20=1.10.1-2 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgmp10=2:6.2.1+dfsg1-1 libgnutls30=3.7.6-2 libgomp1=12.1.0-4 libgpg-error0=1.45-2 libgprofng0=2.38.50.20220627-1 libgssapi-krb5-2=1.19.2-2+b2 libhogweed6=3.7.3-1 libicu71=71.1-3 libidn2-0=2.3.2-2 libisl23=0.24-2 libitm1=12.1.0-4 libjs-jquery=3.6.0+dfsg+~3.5.13-1 libk5crypto3=1.19.2-2+b2 libkeyutils1=1.6.3-1 libkrb5-3=1.19.2-2+b2 libkrb5support0=1.19.2-2+b2 libldap-2.5-0=2.5.12+dfsg-2 liblsan0=12.1.0-4 liblz4-1=1.9.3-2 liblzma5=5.2.5-2.1 libmagic-mgc=1:5.41-4 libmagic1=1:5.41-4 libmount1=2.38-4 libmpc3=1.2.1-2 libmpdec3=2.5.1-2 libmpfr6=4.1.0-3 libncursesw6=6.3+20220423-2 libnettle8=3.7.3-1 libnghttp2-14=1.47.0-1+b1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libp11-kit0=0.24.1-1 libpam-modules=1.4.0-13 libpam-modules-bin=1.4.0-13 libpam-runtime=1.4.0-13 libpam0g=1.4.0-13 libpcre2-8-0=10.40-1 libpcre3=2:8.39-14 libperl5.34=5.34.0-4 libpipeline1=1.5.6-1 libprotobuf23=3.12.4-1+b3 libpsl5=0.21.0-1.2 libpython3-stdlib=3.10.4-1+b1 libpython3.10-minimal=3.10.5-1 libpython3.10-stdlib=3.10.5-1 libpython3.9-minimal=3.9.13-1 libpython3.9-stdlib=3.9.13-1 libquadmath0=12.1.0-4 libreadline8=8.1.2-1.2 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.28+dfsg-6 libsasl2-modules-db=2.1.28+dfsg-6 libseccomp2=2.5.4-1 libselinux1=3.4-1 libsigsegv2=2.14-1 libsmartcols1=2.38-4 libsqlite3-0=3.39.0-1 libssh2-1=1.10.0-3+b1 libssl3=3.0.4-2 libstdc++-11-dev=11.3.0-3 libstdc++6=12.1.0-4 libsub-override-perl=0.09-3 libsystemd0=251.2-7 libtasn1-6=4.18.0-4 libtinfo6=6.3+20220423-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.7-4 libtsan0=11.3.0-3 libubsan1=12.1.0-4 libuchardet0=0.0.7-1 libudev1=251.2-7 libunistring2=1.0-1 libuuid1=2.38-4 libxml2=2.9.14+dfsg-1 libyaml-0-2=0.2.2-1 libzstd1=1.5.2+dfsg-1 linux-libc-dev=5.18.5-1 login=1:4.11.1+dfsg1-2 lsb-base=11.2 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.2-1 mawk=1.3.4.20200120-3.1 media-types=8.0.0 ncurses-base=6.3+20220423-2 ncurses-bin=6.3+20220423-2 openssl=3.0.4-2 patch=2.7.6-7 perl=5.34.0-4 perl-base=5.34.0-4 perl-modules-5.34=5.34.0-4 po-debconf=1.0.21+nmu1 python-babel-localedata=2.8.0+dfsg.1-7 python3=3.10.4-1+b1 python3-all=3.10.4-1+b1 python3-babel=2.8.0+dfsg.1-7 python3-bcrypt=3.2.0-1+b1 python3-biomaj3-core=3.0.27-1 python3-biomaj3-download=3.2.7-1 python3-biomaj3-process=3.0.18-1 python3-biomaj3-user=3.0.12-1 python3-biomaj3-zipkin=0.2.2-3 python3-bson=3.11.0-1+b2 python3-certifi=2020.6.20-1 python3-cffi-backend=1.15.0-1+b1 python3-chardet=4.0.0-2 python3-charset-normalizer=2.0.6-2 python3-click=8.0.3-1 python3-colorama=0.4.5-1 python3-consul=0.7.1-2 python3-decorator=5.1.1-2 python3-distutils=3.10.5-1 python3-elasticsearch=7.16.2-2 python3-flask=2.0.1-2 python3-ftputil=5.0.4-1 python3-future=0.18.2-6 python3-humanfriendly=10.0-1 python3-idna=3.3-1 python3-irodsclient=0.8.1-3 python3-itsdangerous=2.1.2-1 python3-jinja2=3.0.3-1 python3-ldap3=2.8.1-1 python3-lib2to3=3.10.5-1 python3-markupsafe=2.0.1-2+b1 python3-minimal=3.10.4-1+b1 python3-mock=4.0.3-3 python3-nose=1.3.7-8 python3-pbr=5.8.1-2 python3-pika=1.2.0-1 python3-pkg-resources=59.6.0-1.2 python3-ply=3.11-5 python3-prettytable=2.5.0-2 python3-prometheus-client=0.9.0-1 python3-protobuf=3.12.4-1+b3 python3-py-zipkin=0.15.0-2 python3-pyasn1=0.4.8-2 python3-pycurl=7.44.1-5 python3-pymongo=3.11.0-1+b2 python3-redis=3.5.3-2 python3-requests=2.27.1+dfsg-1 python3-setuptools=59.6.0-1.2 python3-simpleeval=0.9.11-1 python3-six=1.16.0-3 python3-tabulate=0.8.9-1 python3-tenacity=8.0.1-1 python3-thriftpy=0.3.9+ds1-2 python3-tz=2022.1-1 python3-urllib3=1.26.9-1 python3-wcwidth=0.2.5+dfsg1-1 python3-werkzeug=2.0.2+dfsg1-1 python3-yaml=5.4.1-1+b1 python3-yapsy=1.12.0-1.3 python3.10=3.10.5-1 python3.10-minimal=3.10.5-1 python3.9=3.9.13-1 python3.9-minimal=3.9.13-1 readline-common=8.1.2-1.2 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sysvinit-utils=3.03-1 tar=1.34+dfsg-1 tzdata=2022a-1 util-linux=2.38-4 util-linux-extra=2.38-4 xz-utils=5.2.5-2.1 zlib1g=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220706T025631Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220706T025631Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220707T030959Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220629T212513Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d biomaj3=3.1.22-1 && mkdir -p /build/biomaj3-YwyC2I && dpkg-source --no-check -x /*.dsc /build/biomaj3-YwyC2I/biomaj3-3.1.22 && chown -R builduser:builduser /build/biomaj3-YwyC2I" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/biomaj3-YwyC2I/biomaj3-3.1.22 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1656600507" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/biomaj3-YwyC2I /tmp/biomaj3-3.1.22-1t9fwz395 bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220629T212513Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.Et_bqBOJi7 as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.Et_bqBOJi7 Reading package lists... Building dependency tree... util-linux is already the newest version (2.38-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 136 kB of archives. After this operation, 401 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220629T212513Z unstable/main amd64 libfakeroot amd64 1.29-1 [48.5 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220629T212513Z unstable/main amd64 fakeroot amd64 1.29-1 [87.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 136 kB in 0s (1055 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4627 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.29-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.29-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.29-1_amd64.deb ... Unpacking fakeroot (1.29-1) ... Setting up libfakeroot:amd64 (1.29-1) ... Setting up fakeroot (1.29-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220706T025631Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220706T025631Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220707T030959Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220629T212513Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.Et_bqBOJi7 Get:1 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm InRelease [130 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220707T030959Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220629T212513Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm/main Sources [12.1 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm/main amd64 Packages [11.6 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220707T030959Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220707T030959Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220707T030959Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220707T030959Z unstable/main amd64 Packages [12.5 MB] Fetched 36.4 MB in 30s (1214 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.Et_bqBOJi7 I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d biomaj3=3.1.22-1 && mkdir -p /build/biomaj3-YwyC2I && dpkg-source --no-check -x /*.dsc /build/biomaj3-YwyC2I/biomaj3-3.1.22 && chown -R builduser:builduser /build/biomaj3-YwyC2I"' exec /tmp/mmdebstrap.Et_bqBOJi7 Reading package lists... NOTICE: 'biomaj3' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/biomaj3.git Please use: git clone https://salsa.debian.org/med-team/biomaj3.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 88.2 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm/main biomaj3 3.1.22-1 (dsc) [2238 B] Get:2 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm/main biomaj3 3.1.22-1 (tar) [69.1 kB] Get:3 http://snapshot.notset.fr/archive/debian/20220706T025631Z bookworm/main biomaj3 3.1.22-1 (diff) [16.8 kB] Fetched 88.2 kB in 0s (1151 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'biomaj3_3.1.22-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting biomaj3 in /build/biomaj3-YwyC2I/biomaj3-3.1.22 dpkg-source: info: unpacking biomaj3_3.1.22.orig.tar.xz dpkg-source: info: unpacking biomaj3_3.1.22-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_remove_drmaa.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/biomaj3-YwyC2I/biomaj3-3.1.22 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1656600507" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.Et_bqBOJi7 dpkg-buildpackage: info: source package biomaj3 dpkg-buildpackage: info: source version 3.1.22-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:239: python3.9 setup.py clean running clean removing '/build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it I: pybuild base:239: python3.10 setup.py clean running clean removing '/build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.10' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-indep dh binary-indep --with python3 --buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_autoreconf -i -O--buildsystem=pybuild dh_auto_configure -i -O--buildsystem=pybuild I: pybuild base:239: python3.9 setup.py config running config I: pybuild base:239: python3.10 setup.py config running config dh_auto_build -i -O--buildsystem=pybuild I: pybuild base:239: /usr/bin/python3.9 setup.py build running build running build_py creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj copying biomaj/__init__.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj copying biomaj/bank.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj copying biomaj/mongo_connector.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj copying biomaj/notify.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj copying biomaj/options.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj copying biomaj/schema_version.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj copying biomaj/session.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj copying biomaj/workflow.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/process copying biomaj/process/__init__.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/process copying biomaj/process/metaprocess.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/process copying biomaj/process/processfactory.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/process running egg_info creating biomaj.egg-info writing biomaj.egg-info/PKG-INFO writing dependency_links to biomaj.egg-info/dependency_links.txt writing requirements to biomaj.egg-info/requires.txt writing top-level names to biomaj.egg-info/top_level.txt writing manifest file 'biomaj.egg-info/SOURCES.txt' reading manifest file 'biomaj.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' under directory 'biomaj' adding license file 'LICENSE' writing manifest file 'biomaj.egg-info/SOURCES.txt' running build_scripts creating build creating build/scripts-3.9 copying scripts/biomaj_migrate_database.py -> build/scripts-3.9 changing mode of build/scripts-3.9/biomaj_migrate_database.py from 644 to 755 I: pybuild base:239: /usr/bin/python3 setup.py build running build running build_py creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj copying biomaj/__init__.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj copying biomaj/bank.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj copying biomaj/mongo_connector.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj copying biomaj/notify.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj copying biomaj/options.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj copying biomaj/schema_version.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj copying biomaj/session.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj copying biomaj/workflow.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/process copying biomaj/process/__init__.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/process copying biomaj/process/metaprocess.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/process copying biomaj/process/processfactory.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/process running egg_info writing biomaj.egg-info/PKG-INFO writing dependency_links to biomaj.egg-info/dependency_links.txt writing requirements to biomaj.egg-info/requires.txt writing top-level names to biomaj.egg-info/top_level.txt reading manifest file 'biomaj.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' under directory 'biomaj' adding license file 'LICENSE' writing manifest file 'biomaj.egg-info/SOURCES.txt' running build_scripts creating build/scripts-3.10 copying scripts/biomaj_migrate_database.py -> build/scripts-3.10 changing mode of build/scripts-3.10/biomaj_migrate_database.py from 644 to 755 dh: command-omitted: The call to "dh_auto_test -i -O--buildsystem=pybuild" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -i -O--buildsystem=pybuild dh_prep -i -O--buildsystem=pybuild dh_installdirs -i -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-biomaj3/ -i -O--buildsystem=pybuild I: pybuild base:239: /usr/bin/python3.9 setup.py install --root /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3 running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running egg_info writing biomaj.egg-info/PKG-INFO writing dependency_links to biomaj.egg-info/dependency_links.txt writing requirements to biomaj.egg-info/requires.txt writing top-level names to biomaj.egg-info/top_level.txt reading manifest file 'biomaj.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' under directory 'biomaj' adding license file 'LICENSE' writing manifest file 'biomaj.egg-info/SOURCES.txt' running build_scripts running install_lib creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9 creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/__init__.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/bank.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/mongo_connector.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/notify.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/options.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/schema_version.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/session.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/workflow.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/process copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/process/__init__.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/process copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/process/metaprocess.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/process copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.9_biomaj/build/biomaj/process/processfactory.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/process byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/__init__.py to __init__.cpython-39.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/bank.py to bank.cpython-39.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/mongo_connector.py to mongo_connector.cpython-39.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/notify.py to notify.cpython-39.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/options.py to options.cpython-39.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/schema_version.py to schema_version.cpython-39.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/session.py to session.cpython-39.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/workflow.py to workflow.cpython-39.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/process/__init__.py to __init__.cpython-39.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/process/metaprocess.py to metaprocess.cpython-39.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj/process/processfactory.py to processfactory.cpython-39.pyc running install_egg_info Copying biomaj.egg-info to /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.9/dist-packages/biomaj-3.1.22.egg-info Skipping SOURCES.txt running install_scripts creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/bin copying build/scripts-3.9/biomaj_migrate_database.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/bin changing mode of /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/bin/biomaj_migrate_database.py to 755 I: pybuild base:239: /usr/bin/python3 setup.py install --root /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3 running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running egg_info writing biomaj.egg-info/PKG-INFO writing dependency_links to biomaj.egg-info/dependency_links.txt writing requirements to biomaj.egg-info/requires.txt writing top-level names to biomaj.egg-info/top_level.txt reading manifest file 'biomaj.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' under directory 'biomaj' adding license file 'LICENSE' writing manifest file 'biomaj.egg-info/SOURCES.txt' running build_scripts running install_lib creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10 creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/__init__.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/bank.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/mongo_connector.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/notify.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/options.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/schema_version.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/session.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/workflow.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj creating /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/process copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/process/__init__.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/process copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/process/metaprocess.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/process copying /build/biomaj3-YwyC2I/biomaj3-3.1.22/.pybuild/cpython3_3.10_biomaj/build/biomaj/process/processfactory.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/process byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/__init__.py to __init__.cpython-310.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/bank.py to bank.cpython-310.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/mongo_connector.py to mongo_connector.cpython-310.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/notify.py to notify.cpython-310.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/options.py to options.cpython-310.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/schema_version.py to schema_version.cpython-310.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/session.py to session.cpython-310.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/workflow.py to workflow.cpython-310.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/process/__init__.py to __init__.cpython-310.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/process/metaprocess.py to metaprocess.cpython-310.pyc byte-compiling /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj/process/processfactory.py to processfactory.cpython-310.pyc running install_egg_info Copying biomaj.egg-info to /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/lib/python3.10/dist-packages/biomaj-3.1.22.egg-info Skipping SOURCES.txt running install_scripts copying build/scripts-3.10/biomaj_migrate_database.py -> /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/bin changing mode of /build/biomaj3-YwyC2I/biomaj3-3.1.22/debian/python3-biomaj3/usr/bin/biomaj_migrate_database.py to 755 debian/rules override_dh_install make[1]: Entering directory '/build/biomaj3-YwyC2I/biomaj3-3.1.22' dh_install sed -i '1s;^;#!/usr/bin/python3\n;' debian/python3-biomaj3/usr/bin/biomaj_migrate_database.py make[1]: Leaving directory '/build/biomaj3-YwyC2I/biomaj3-3.1.22' dh_installdocs -i -O--buildsystem=pybuild dh_installchangelogs -i -O--buildsystem=pybuild debian/rules override_dh_installexamples make[1]: Entering directory '/build/biomaj3-YwyC2I/biomaj3-3.1.22' dh_installexamples sed -i '1s;^;#!/bin/bash\n;' debian/python3-biomaj3/usr/share/doc/python3-biomaj3/examples/tools/process/concat.sh chmod -x debian/python3-biomaj3/usr/share/doc/python3-biomaj3/examples/global.properties.example make[1]: Leaving directory '/build/biomaj3-YwyC2I/biomaj3-3.1.22' dh_python3 -i -O--buildsystem=pybuild I: dh_python3 pydist:292: Cannot find package that provides py_bcrypt. Please add package that provides it to Build-Depends or add "py_bcrypt python3-py-bcrypt" line to debian/py3dist-overrides or add proper dependency to Depends by hand and ignore this info. dh_installsystemduser -i -O--buildsystem=pybuild dh_lintian -i -O--buildsystem=pybuild dh_perl -i -O--buildsystem=pybuild dh_link -i -O--buildsystem=pybuild dh_strip_nondeterminism -i -O--buildsystem=pybuild dh_compress -i -O--buildsystem=pybuild dh_fixperms -i -O--buildsystem=pybuild dh_missing -i -O--buildsystem=pybuild dh_installdeb -i -O--buildsystem=pybuild dh_gencontrol -i -O--buildsystem=pybuild dpkg-gencontrol: warning: Recommends field of package python3-biomaj3: substitution variable ${python3:Recommends} used, but is not defined dpkg-gencontrol: warning: Suggests field of package python3-biomaj3: substitution variable ${python3:Suggests} used, but is not defined dh_md5sums -i -O--buildsystem=pybuild dh_builddeb -i -O--buildsystem=pybuild dpkg-deb: building package 'python3-biomaj3' in '../python3-biomaj3_3.1.22-1_all.deb'. dpkg-genbuildinfo --build=all -O../biomaj3_3.1.22-1_all.buildinfo dpkg-genchanges --build=all -O../biomaj3_3.1.22-1_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/biomaj3-YwyC2I /tmp/biomaj3-3.1.22-1t9fwz395 I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.Et_bqBOJi7... I: success in 451.9428 seconds md5: python3-biomaj3_3.1.22-1_all.deb: OK sha1: python3-biomaj3_3.1.22-1_all.deb: OK sha256: python3-biomaj3_3.1.22-1_all.deb: OK Checksums: OK