Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/a/augur/augur_15.0.2-1_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/augur-15.0.2-1tzxclw8b/augur_15.0.2-1_all.buildinfo Get source package info: augur=15.0.2-1 Source URL: http://snapshot.notset.fr/mr/package/augur/15.0.2-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6+b1 binutils=2.38-4 binutils-common=2.38-4 binutils-x86-64-linux-gnu=2.38-4 blt=2.5.3+dfsg-4.1 bsdextrautils=2.38-4 bsdutils=1:2.38-4 build-essential=12.9 bzip2=1.0.8-5 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.3.0-1 dash=0.5.11+git20210903+057cd650a4ed-8 debconf=1.5.79 debhelper=13.7.1 debianutils=5.7-0.2 dh-autoreconf=20 dh-python=5.20220403 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.7 dpkg-dev=1.21.7 dwz=0.14-1 file=1:5.41-4 findutils=4.9.0-3 fontconfig-config=2.13.1-4.4 fonts-dejavu-core=2.37-2 fonts-lyx=2.3.6-1 fonts-urw-base35=20200910-1 g++=4:11.2.0-2 g++-11=11.3.0-1 gcc=4:11.2.0-2 gcc-11=11.3.0-1 gcc-11-base=11.3.0-1 gcc-12-base=12.1.0-2 gettext=0.21-6 gettext-base=0.21-6 grep=3.7-1 groff-base=1.22.4-8 gzip=1.12-1 hostname=3.23 init-system-helpers=1.62 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libarchive-zip-perl=1.68-1 libasan6=11.3.0-1 libatomic1=12.1.0-2 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libbinutils=2.38-4 libblas3=3.10.1-1 libblkid1=2.38-4 libbrotli1=1.0.9-2+b3 libbsd0=0.11.6-1 libbz2-1.0=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dev=2.33-7 libcap-ng0=0.7.9-2.2+b2 libcap2=1:2.44-1 libcc1-0=12.1.0-2 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38-4 libctf0=2.38-4 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.262 libdebhelper-perl=13.7.1 libdeflate0=1.10-2 libdpkg-perl=1.21.7 libelf1=0.187-1 libexpat1=2.4.8-1 libffi8=3.4.2-4 libfile-stripnondeterminism-perl=1.13.0-1 libfontconfig1=2.13.1-4.4 libfreetype6=2.12.1+dfsg-1 libfribidi0=1.0.8-2.1 libgcc-11-dev=11.3.0-1 libgcc-s1=12.1.0-2 libgcrypt20=1.10.1-2 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgfortran5=12.1.0-2 libglib2.0-0=2.72.1-1 libgmp10=2:6.2.1+dfsg-3 libgomp1=12.1.0-2 libgpg-error0=1.45-2 libgraphite2-3=1.3.14-1 libgssapi-krb5-2=1.19.2-2+b1 libharfbuzz0b=2.7.4-1+b1 libicu71=71.1-3 libimagequant0=2.17.0-1 libisl23=0.24-2 libitm1=12.1.0-2 libjbig0=2.1-3.1+b2 libjpeg62-turbo=1:2.1.2-1 libjs-jquery=3.6.0+dfsg+~3.5.13-1 libjs-jquery-ui=1.13.1+dfsg-1 libk5crypto3=1.19.2-2+b1 libkeyutils1=1.6.1-3 libkrb5-3=1.19.2-2+b1 libkrb5support0=1.19.2-2+b1 liblapack3=3.10.1-1 liblbfgsb0=3.0+dfsg.3-10 liblcms2-2=2.12~rc1-2 liblsan0=12.1.0-2 liblz4-1=1.9.3-2 liblzma5=5.2.5-2.1 libmagic-mgc=1:5.41-4 libmagic1=1:5.41-4 libmd0=1.0.4-1 libmount1=2.38-4 libmpc3=1.2.1-2 libmpdec3=2.5.1-2 libmpfr6=4.1.0-3 libncursesw6=6.3+20220423-2 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libopenjp2-7=2.4.0-6 libpam-modules=1.4.0-13 libpam-modules-bin=1.4.0-13 libpam-runtime=1.4.0-13 libpam0g=1.4.0-13 libpcre2-8-0=10.40-1 libpcre3=2:8.39-14 libperl5.34=5.34.0-4 libpipeline1=1.5.6-1 libpng16-16=1.6.37-5 libpython3-stdlib=3.10.4-1+b1 libpython3.10-minimal=3.10.4-4+b1 libpython3.10-stdlib=3.10.4-4+b1 libpython3.9-minimal=3.9.12-1+b1 libpython3.9-stdlib=3.9.12-1+b1 libqhull-r8.0=2020.2-4 libquadmath0=12.1.0-2 libraqm0=0.7.0-4 libreadline8=8.1.2-1.2 libseccomp2=2.5.4-1 libselinux1=3.3-1+b2 libsigsegv2=2.14-1 libsmartcols1=2.38-4 libsqlite3-0=3.38.5-1 libssl1.1=1.1.1o-1 libssl3=3.0.3-3 libstdc++-11-dev=11.3.0-1 libstdc++6=12.1.0-2 libsub-override-perl=0.09-2 libsystemd0=250.4-1 libtcl8.6=8.6.12+dfsg-1 libtiff5=4.3.0-7 libtinfo6=6.3+20220423-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtk8.6=8.6.12-1 libtool=2.4.7-4 libtsan0=11.3.0-1 libubsan1=12.1.0-2 libuchardet0=0.0.7-1 libudev1=250.4-1 libunistring2=1.0-1 libuuid1=2.38-4 libwebp7=1.2.2-2+b1 libwebpdemux2=1.2.2-2+b1 libwebpmux3=1.2.2-2+b1 libx11-6=2:1.7.5-1 libx11-data=2:1.7.5-1 libxau6=1:1.0.9-1 libxcb1=1.14-3 libxdmcp6=1:1.1.2-3 libxext6=2:1.3.4-1 libxft2=2.3.4-1 libxml2=2.9.14+dfsg-1 libxrender1=1:0.9.10-1 libxslt1.1=1.1.34-4 libxss1=1:1.2.3-1 libzstd1=1.5.2+dfsg-1 linux-libc-dev=5.17.3-1 login=1:4.11.1+dfsg1-2 lsb-base=11.1.0 m4=1.4.18-5 mafft=7.490-1 mailcap=3.70+nmu1 make=4.3-4.1 man-db=2.10.2-1 mawk=1.3.4.20200120-3+b1 media-types=8.0.0 mime-support=3.66 ncurses-base=6.3+20220423-2 ncurses-bin=6.3+20220423-2 patch=2.7.6-7 perl=5.34.0-4 perl-base=5.34.0-4 perl-modules-5.34=5.34.0-4 pigz=2.6-1 po-debconf=1.0.21+nmu1 python-matplotlib-data=3.5.1-2 python3=3.10.4-1+b1 python3-all=3.10.4-1+b1 python3-appdirs=1.4.4-2 python3-attr=21.2.0-1 python3-biopython=1.79+dfsg-3 python3-brotli=1.0.9-2+b3 python3-cycler=0.11.0-1 python3-dateutil=2.8.1-6 python3-decorator=4.4.2-2 python3-distutils=3.9.12-1 python3-fonttools=4.32.0-1 python3-freezegun=1.1.0-1 python3-fs=2.4.12-1 python3-iniconfig=1.1.1-2 python3-isodate=0.6.1-1 python3-jsonschema=3.2.0-5 python3-kiwisolver=1.3.2-1+b1 python3-lib2to3=3.9.12-1 python3-lxml=4.8.0-1 python3-lz4=4.0.0+dfsg-1 python3-matplotlib=3.5.1-2+b1 python3-minimal=3.10.4-1+b1 python3-more-itertools=8.10.0-2 python3-mpmath=1.2.1-2 python3-networkx=2.5+ds-2 python3-numpy=1:1.21.5-1 python3-packaging=21.3-1 python3-pandas=1.3.5+dfsg-4 python3-pandas-lib=1.3.5+dfsg-4 python3-pil=9.1.0-1 python3-pil.imagetk=9.1.0-1 python3-pkg-resources=59.6.0-1.2 python3-pluggy=1.0.0-1 python3-py=1.10.0-1 python3-pyparsing=3.0.7-2 python3-pyrsistent=0.18.1-1 python3-pytest=6.2.5-2 python3-pytest-mock=3.6.1-1 python3-renderpm=3.6.8-1 python3-reportlab=3.6.8-1 python3-reportlab-accel=3.6.8-1 python3-scipy=1.7.3-2 python3-setuptools=59.6.0-1.2 python3-six=1.16.0-3 python3-sympy=1.10.1-3 python3-tk=3.9.12-1 python3-toml=0.10.2-1 python3-treetime=0.8.6-1 python3-tz=2022.1-1 python3-ufolib2=0.13.1+dfsg1-1 python3-unicodedata2=14.0.0+ds-8 python3-xopen=1.2.1-4 python3.10=3.10.4-4+b1 python3.10-minimal=3.10.4-4+b1 python3.9=3.9.12-1+b1 python3.9-minimal=3.9.12-1+b1 readline-common=8.1.2-1.2 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sgml-base=1.30 sysvinit-utils=3.03-1 tar=1.34+dfsg-1 tk8.6-blt2.5=2.5.3+dfsg-4.1 tzdata=2022a-1 ucf=3.0043 unicode-data=14.0.0-1.1 util-linux=2.38-4 util-linux-extra=2.38-4 vcftools=0.1.16-3 w3c-sgml-lib=1.3-3 x11-common=1:7.7+23 xml-core=0.18+nmu1 xz-utils=5.2.5-2.1 zlib1g=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220521T151904Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220521T151904Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220516T154358Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220511T204932Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d augur=15.0.2-1 && mkdir -p /build/augur-nKkw7I && dpkg-source --no-check -x /*.dsc /build/augur-nKkw7I/augur-15.0.2 && chown -R builduser:builduser /build/augur-nKkw7I" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/augur-nKkw7I/augur-15.0.2 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1652620575" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/augur-nKkw7I /tmp/augur-15.0.2-1tzxclw8b bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.dVRYrSk5Uy as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.dVRYrSk5Uy Reading package lists... Building dependency tree... util-linux is already the newest version (2.38-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 135 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable/main amd64 libfakeroot amd64 1.28-1 [48.2 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable/main amd64 fakeroot amd64 1.28-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 135 kB in 0s (1000 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4628 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.28-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.28-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.28-1_amd64.deb ... Unpacking fakeroot (1.28-1) ... Setting up libfakeroot:amd64 (1.28-1) ... Setting up fakeroot (1.28-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220521T151904Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220521T151904Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220516T154358Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220511T204932Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.dVRYrSk5Uy Get:1 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm InRelease [130 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220516T154358Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm/main Sources [11.9 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm/main amd64 Packages [11.5 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220516T154358Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220516T154358Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220516T154358Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220516T154358Z unstable/main amd64 Packages [12.4 MB] Fetched 36.1 MB in 30s (1203 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.dVRYrSk5Uy I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d augur=15.0.2-1 && mkdir -p /build/augur-nKkw7I && dpkg-source --no-check -x /*.dsc /build/augur-nKkw7I/augur-15.0.2 && chown -R builduser:builduser /build/augur-nKkw7I"' exec /tmp/mmdebstrap.dVRYrSk5Uy Reading package lists... NOTICE: 'augur' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/augur.git Please use: git clone https://salsa.debian.org/med-team/augur.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 11.7 MB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm/main augur 15.0.2-1 (dsc) [2561 B] Get:2 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm/main augur 15.0.2-1 (tar) [11.7 MB] Get:3 http://snapshot.notset.fr/archive/debian/20220521T151904Z bookworm/main augur 15.0.2-1 (diff) [14.3 kB] Fetched 11.7 MB in 27s (431 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'augur_15.0.2-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting augur in /build/augur-nKkw7I/augur-15.0.2 dpkg-source: info: unpacking augur_15.0.2.orig.tar.gz dpkg-source: info: unpacking augur_15.0.2-1.debian.tar.xz I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/augur-nKkw7I/augur-15.0.2 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1652620575" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.dVRYrSk5Uy dpkg-buildpackage: info: source package augur dpkg-buildpackage: info: source version 15.0.2-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/augur-nKkw7I/augur-15.0.2' dh_auto_clean I: pybuild base:239: python3.9 setup.py clean running clean removing '/build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it I: pybuild base:239: python3.10 setup.py clean running clean removing '/build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.10' does not exist -- can't clean it rm -rf .pytest_cache nextstrain_augur.egg-info make[1]: Leaving directory '/build/augur-nKkw7I/augur-15.0.2' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-indep dh binary-indep --with python3 --buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_autoreconf -i -O--buildsystem=pybuild dh_auto_configure -i -O--buildsystem=pybuild I: pybuild base:239: python3.9 setup.py config running config I: pybuild base:239: python3.10 setup.py config running config dh_auto_build -i -O--buildsystem=pybuild I: pybuild base:239: /usr/bin/python3.9 setup.py build running build running build_py creating /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/__init__.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/__main__.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/__version__.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/align.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/ancestral.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/clades.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/dates.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/distance.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/export.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/export_v1.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/export_v2.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/filenames.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/filter.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/frequencies.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/frequency_estimators.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/import.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/import_beast.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/index.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/io.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/lbi.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/mask.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/parse.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/reconstruct_sequences.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/refine.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/sequence_traits.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/titer_model.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/titers.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/traits.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/translate.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/tree.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/utils.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/validate.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/validate_export.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur copying augur/version.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur creating /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support copying augur/util_support/__init__.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support copying augur/util_support/color_parser.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support copying augur/util_support/color_parser_line.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support copying augur/util_support/date_disambiguator.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support copying augur/util_support/metadata_file.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support copying augur/util_support/node_data.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support copying augur/util_support/node_data_file.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support copying augur/util_support/node_data_reader.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support copying augur/util_support/shell_command_runner.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support creating /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data copying augur/data/colors.tsv -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data copying augur/data/lat_longs.tsv -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data copying augur/data/schema-annotations.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data copying augur/data/schema-auspice-config-v2.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data copying augur/data/schema-export-root-sequence.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data copying augur/data/schema-export-v1-meta.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data copying augur/data/schema-export-v1-tree.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data copying augur/data/schema-export-v2.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data copying augur/data/schema-frequencies.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data copying augur/data/schema-measurements.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data copying augur/data/schema-tip-frequencies.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data I: pybuild base:239: /usr/bin/python3 setup.py build running build running build_py creating /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/__init__.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/__main__.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/__version__.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/align.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/ancestral.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/clades.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/dates.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/distance.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/export.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/export_v1.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/export_v2.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/filenames.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/filter.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/frequencies.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/frequency_estimators.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/import.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/import_beast.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/index.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/io.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/lbi.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/mask.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/parse.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/reconstruct_sequences.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/refine.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/sequence_traits.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/titer_model.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/titers.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/traits.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/translate.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/tree.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/utils.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/validate.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/validate_export.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur copying augur/version.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur creating /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support copying augur/util_support/__init__.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support copying augur/util_support/color_parser.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support copying augur/util_support/color_parser_line.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support copying augur/util_support/date_disambiguator.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support copying augur/util_support/metadata_file.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support copying augur/util_support/node_data.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support copying augur/util_support/node_data_file.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support copying augur/util_support/node_data_reader.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support copying augur/util_support/shell_command_runner.py -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support creating /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data copying augur/data/colors.tsv -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data copying augur/data/lat_longs.tsv -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data copying augur/data/schema-annotations.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data copying augur/data/schema-auspice-config-v2.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data copying augur/data/schema-export-root-sequence.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data copying augur/data/schema-export-v1-meta.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data copying augur/data/schema-export-v1-tree.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data copying augur/data/schema-export-v2.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data copying augur/data/schema-frequencies.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data copying augur/data/schema-measurements.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data copying augur/data/schema-tip-frequencies.json -> /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data dh: command-omitted: The call to "dh_auto_test -i -O--buildsystem=pybuild" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -i -O--buildsystem=pybuild dh_prep -i -O--buildsystem=pybuild dh_auto_install --destdir=debian/augur/ -i -O--buildsystem=pybuild I: pybuild base:239: /usr/bin/python3.9 setup.py install --root /build/augur-nKkw7I/augur-15.0.2/debian/augur running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running install_lib creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9 creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/__init__.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/__main__.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/__version__.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/align.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/ancestral.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/clades.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/dates.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/distance.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/export.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/export_v1.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/export_v2.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/filenames.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/filter.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/frequencies.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/frequency_estimators.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/import.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/import_beast.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/index.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/io.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/lbi.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/mask.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/parse.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/reconstruct_sequences.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/refine.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/sequence_traits.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/titer_model.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/titers.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/traits.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/translate.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/tree.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/utils.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/validate.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/validate_export.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/version.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support/__init__.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support/color_parser.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support/color_parser_line.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support/date_disambiguator.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support/metadata_file.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support/node_data.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support/node_data_file.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support/node_data_reader.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/util_support/shell_command_runner.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data/colors.tsv -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data/lat_longs.tsv -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data/schema-annotations.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data/schema-auspice-config-v2.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data/schema-export-root-sequence.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data/schema-export-v1-meta.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data/schema-export-v1-tree.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data/schema-export-v2.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data/schema-frequencies.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data/schema-measurements.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.9/build/augur/data/schema-tip-frequencies.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/data byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/__init__.py to __init__.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/__main__.py to __main__.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/__version__.py to __version__.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/align.py to align.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/ancestral.py to ancestral.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/clades.py to clades.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/dates.py to dates.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/distance.py to distance.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/export.py to export.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/export_v1.py to export_v1.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/export_v2.py to export_v2.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/filenames.py to filenames.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/filter.py to filter.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/frequencies.py to frequencies.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/frequency_estimators.py to frequency_estimators.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/import.py to import.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/import_beast.py to import_beast.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/index.py to index.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/io.py to io.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/lbi.py to lbi.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/mask.py to mask.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/parse.py to parse.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/reconstruct_sequences.py to reconstruct_sequences.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/refine.py to refine.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/sequence_traits.py to sequence_traits.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/titer_model.py to titer_model.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/titers.py to titers.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/traits.py to traits.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/translate.py to translate.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/tree.py to tree.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/utils.py to utils.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/validate.py to validate.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/validate_export.py to validate_export.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/version.py to version.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support/__init__.py to __init__.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support/color_parser.py to color_parser.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support/color_parser_line.py to color_parser_line.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support/date_disambiguator.py to date_disambiguator.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support/metadata_file.py to metadata_file.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support/node_data.py to node_data.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support/node_data_file.py to node_data_file.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support/node_data_reader.py to node_data_reader.cpython-39.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/augur/util_support/shell_command_runner.py to shell_command_runner.cpython-39.pyc running install_egg_info running egg_info creating nextstrain_augur.egg-info writing nextstrain_augur.egg-info/PKG-INFO writing dependency_links to nextstrain_augur.egg-info/dependency_links.txt writing entry points to nextstrain_augur.egg-info/entry_points.txt writing requirements to nextstrain_augur.egg-info/requires.txt writing top-level names to nextstrain_augur.egg-info/top_level.txt writing manifest file 'nextstrain_augur.egg-info/SOURCES.txt' reading manifest file 'nextstrain_augur.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.txt' writing manifest file 'nextstrain_augur.egg-info/SOURCES.txt' Copying nextstrain_augur.egg-info to /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.9/dist-packages/nextstrain_augur-15.0.2.egg-info Skipping SOURCES.txt running install_scripts Installing augur script to /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/bin I: pybuild base:239: /usr/bin/python3 setup.py install --root /build/augur-nKkw7I/augur-15.0.2/debian/augur running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running install_lib creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10 creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/__init__.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/__main__.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/__version__.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/align.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/ancestral.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/clades.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/dates.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/distance.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/export.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/export_v1.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/export_v2.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/filenames.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/filter.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/frequencies.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/frequency_estimators.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/import.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/import_beast.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/index.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/io.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/lbi.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/mask.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/parse.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/reconstruct_sequences.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/refine.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/sequence_traits.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/titer_model.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/titers.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/traits.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/translate.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/tree.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/utils.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/validate.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/validate_export.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/version.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support/__init__.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support/color_parser.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support/color_parser_line.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support/date_disambiguator.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support/metadata_file.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support/node_data.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support/node_data_file.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support/node_data_reader.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/util_support/shell_command_runner.py -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support creating /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data/colors.tsv -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data/lat_longs.tsv -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data/schema-annotations.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data/schema-auspice-config-v2.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data/schema-export-root-sequence.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data/schema-export-v1-meta.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data/schema-export-v1-tree.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data/schema-export-v2.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data/schema-frequencies.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data/schema-measurements.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data copying /build/augur-nKkw7I/augur-15.0.2/.pybuild/cpython3_3.10/build/augur/data/schema-tip-frequencies.json -> /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/data byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/__init__.py to __init__.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/__main__.py to __main__.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/__version__.py to __version__.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/align.py to align.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/ancestral.py to ancestral.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/clades.py to clades.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/dates.py to dates.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/distance.py to distance.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/export.py to export.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/export_v1.py to export_v1.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/export_v2.py to export_v2.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/filenames.py to filenames.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/filter.py to filter.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/frequencies.py to frequencies.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/frequency_estimators.py to frequency_estimators.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/import.py to import.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/import_beast.py to import_beast.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/index.py to index.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/io.py to io.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/lbi.py to lbi.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/mask.py to mask.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/parse.py to parse.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/reconstruct_sequences.py to reconstruct_sequences.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/refine.py to refine.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/sequence_traits.py to sequence_traits.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/titer_model.py to titer_model.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/titers.py to titers.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/traits.py to traits.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/translate.py to translate.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/tree.py to tree.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/utils.py to utils.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/validate.py to validate.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/validate_export.py to validate_export.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/version.py to version.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support/__init__.py to __init__.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support/color_parser.py to color_parser.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support/color_parser_line.py to color_parser_line.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support/date_disambiguator.py to date_disambiguator.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support/metadata_file.py to metadata_file.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support/node_data.py to node_data.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support/node_data_file.py to node_data_file.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support/node_data_reader.py to node_data_reader.cpython-310.pyc byte-compiling /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/augur/util_support/shell_command_runner.py to shell_command_runner.cpython-310.pyc running install_egg_info running egg_info writing nextstrain_augur.egg-info/PKG-INFO writing dependency_links to nextstrain_augur.egg-info/dependency_links.txt writing entry points to nextstrain_augur.egg-info/entry_points.txt writing requirements to nextstrain_augur.egg-info/requires.txt writing top-level names to nextstrain_augur.egg-info/top_level.txt reading manifest file 'nextstrain_augur.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.txt' writing manifest file 'nextstrain_augur.egg-info/SOURCES.txt' Copying nextstrain_augur.egg-info to /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/lib/python3.10/dist-packages/nextstrain_augur-15.0.2.egg-info Skipping SOURCES.txt running install_scripts Installing augur script to /build/augur-nKkw7I/augur-15.0.2/debian/augur/usr/bin debian/rules override_dh_install make[1]: Entering directory '/build/augur-nKkw7I/augur-15.0.2' dh_install find debian -name LICENSE.txt -delete find debian -name '*.fasta' -delete make[1]: Leaving directory '/build/augur-nKkw7I/augur-15.0.2' dh_installdocs -i -O--buildsystem=pybuild dh_installchangelogs -i -O--buildsystem=pybuild dh_installman -i -O--buildsystem=pybuild dh_python3 -i -O--buildsystem=pybuild dh_installsystemduser -i -O--buildsystem=pybuild dh_perl -i -O--buildsystem=pybuild dh_link -i -O--buildsystem=pybuild dh_strip_nondeterminism -i -O--buildsystem=pybuild dh_compress -i -O--buildsystem=pybuild dh_fixperms -i -O--buildsystem=pybuild dh_missing -i -O--buildsystem=pybuild dh_installdeb -i -O--buildsystem=pybuild dh_gencontrol -i -O--buildsystem=pybuild dh_md5sums -i -O--buildsystem=pybuild dh_builddeb -i -O--buildsystem=pybuild dpkg-deb: building package 'augur' in '../augur_15.0.2-1_all.deb'. dpkg-genbuildinfo --build=all -O../augur_15.0.2-1_all.buildinfo dpkg-genchanges --build=all -O../augur_15.0.2-1_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/augur-nKkw7I /tmp/augur-15.0.2-1tzxclw8b I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.dVRYrSk5Uy... I: success in 598.7993 seconds md5: augur_15.0.2-1_all.deb: OK sha1: augur_15.0.2-1_all.deb: OK sha256: augur_15.0.2-1_all.deb: OK Checksums: OK