Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/a/atropos/atropos_1.1.29+dfsg-1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/atropos-1.1.29+dfsg-1feat8ndv/atropos_1.1.29+dfsg-1_amd64.buildinfo Get source package info: atropos=1.1.29+dfsg-1 Source URL: http://snapshot.notset.fr/mr/package/atropos/1.1.29+dfsg-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11.1 automake=1:1.16.3-1 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.48 bash=5.1-1 binutils=2.35.1-4 binutils-common=2.35.1-4 binutils-x86-64-linux-gnu=2.35.1-4 bsdextrautils=2.36.1-2 bsdutils=1:2.36.1-2 build-essential=12.8 bzip2=1.0.8-4 coreutils=8.32-4+b1 cpp=4:10.2.0-1 cpp-10=10.2.1-1 cython3=0.29.21-3+b1 dash=0.5.11+git20200708+dd9ef66-2 debconf=1.5.74 debhelper=13.3 debianutils=4.11.2 dh-autoreconf=19 dh-python=4.20201102 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13+20201015-2 file=1:5.39-3 findutils=4.7.0+git20201010-2 g++=4:10.2.0-1 g++-10=10.2.1-1 gcc=4:10.2.0-1 gcc-10=10.2.1-1 gcc-10-base=10.2.1-1 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 grep=3.6-1 groff-base=1.22.4-5 gzip=1.10-2 hostname=3.23 init-system-helpers=1.59 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libasan6=10.2.1-1 libatomic1=10.2.1-1 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3.1 libaudit1=1:2.8.5-3.1+b1 libbinutils=2.35.1-4 libblkid1=2.36.1-2 libbrotli1=1.0.9-2+b2 libbz2-1.0=1.0.8-4 libc-bin=2.31-5 libc-dev-bin=2.31-5 libc6=2.31-5 libc6-dev=2.31-5 libcap-ng0=0.7.9-2.2+b1 libcc1-0=10.2.1-1 libcom-err2=1.45.6-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.1-4 libctf0=2.35.1-4 libcurl3-gnutls=7.72.0-1 libdb5.3=5.3.28+dfsg1-0.6 libdebconfclient0=0.255 libdebhelper-perl=13.3 libdeflate0=1.6-1 libdpkg-perl=1.20.5 libelf1=0.182-1 libexpat1=2.2.10-1 libexpat1-dev=2.2.10-1 libffi7=3.3-5 libfile-stripnondeterminism-perl=1.9.0-1 libgcc-10-dev=10.2.1-1 libgcc-s1=10.2.1-1 libgcrypt20=1.8.7-2 libgdbm-compat4=1.18.1-5.1 libgdbm6=1.18.1-5.1 libglib2.0-0=2.66.3-2 libgmp10=2:6.2.1+dfsg-1 libgnutls30=3.7.0-3 libgomp1=10.2.1-1 libgpg-error0=1.38-2 libgssapi-krb5-2=1.18.3-4 libhogweed6=3.6-2 libhts3=1.11-2 libicu67=67.1-5 libidn2-0=2.3.0-4 libisl23=0.23-1 libitm1=10.2.1-1 libk5crypto3=1.18.3-4 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-4 libkrb5support0=1.18.3-4 libldap-2.4-2=2.4.56+dfsg-1 liblsan0=10.2.1-1 liblz4-1=1.9.2-2 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.39-3 libmagic1=1:5.39-3 libmount1=2.36.1-2 libmpc3=1.2.0-1 libmpfr6=4.1.0-3 libncursesw6=6.2+20201114-1 libnettle8=3.6-2 libnghttp2-14=1.42.0-1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libp11-kit0=0.23.21-2 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpcre2-8-0=10.35-2 libpcre3=2:8.39-13 libperl5.32=5.32.0-5 libpipeline1=1.5.3-1 libpsl5=0.21.0-1.1 libpython3-dev=3.9.0-4 libpython3-stdlib=3.9.0-4 libpython3.9=3.9.1-1 libpython3.9-dev=3.9.1-1 libpython3.9-minimal=3.9.1-1 libpython3.9-stdlib=3.9.1-1 libquadmath0=10.2.1-1 libreadline8=8.1-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.27+dfsg-2 libsasl2-modules-db=2.1.27+dfsg-2 libseccomp2=2.5.0-3+b1 libselinux1=3.1-2+b2 libsigsegv2=2.12-2 libsmartcols1=2.36.1-2 libsqlite3-0=3.34.0-1 libssh2-1=1.9.0-1 libssl1.1=1.1.1i-1 libstdc++-10-dev=10.2.1-1 libstdc++6=10.2.1-1 libsub-override-perl=0.09-2 libsystemd0=247.1-3 libtasn1-6=4.16.0-2 libtinfo6=6.2+20201114-1 libtirpc-common=1.2.6-3 libtirpc-dev=1.2.6-3 libtirpc3=1.2.6-3 libtool=2.4.6-14 libtsan0=10.2.1-1 libubsan1=10.2.1-1 libuchardet0=0.0.7-1 libudev1=247.1-3 libunistring2=0.9.10-4 libuuid1=2.36.1-2 libxml2=2.9.10+dfsg-6.3+b1 libzstd1=1.4.5+dfsg-4 linux-libc-dev=5.9.11-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 mailcap=3.67 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 media-types=1.0.1 mime-support=3.66 ncurses-base=6.2+20201114-1 ncurses-bin=6.2+20201114-1 patch=2.7.6-6 perl=5.32.0-5 perl-base=5.32.0-5 perl-modules-5.32=5.32.0-5 po-debconf=1.0.21 python3=3.9.0-4 python3-atomicwrites=1.4.0-1 python3-attr=20.3.0-1 python3-dev=3.9.0-4 python3-distutils=3.8.6-1 python3-importlib-metadata=1.6.0-2 python3-jinja2=2.11.2-1 python3-lib2to3=3.8.6-1 python3-markupsafe=1.1.1-1+b3 python3-minimal=3.9.0-4 python3-more-itertools=4.2.0-3 python3-packaging=20.4-1 python3-pkg-resources=50.3.0-1 python3-pluggy=0.13.0-5 python3-py=1.9.0-2 python3-pyparsing=2.4.7-1 python3-pysam=0.15.4+ds-3+b2 python3-pytest=4.6.11-1 python3-setuptools=50.3.0-1 python3-six=1.15.0-2 python3-wcwidth=0.1.9+dfsg1-2 python3-zipp=1.0.0-3 python3.9=3.9.1-1 python3.9-dev=3.9.1-1 python3.9-minimal=3.9.1-1 readline-common=8.1-1 sed=4.7-1 sensible-utils=0.0.12+nmu1 sysvinit-utils=2.96-5 tar=1.32+dfsg-1 tzdata=2020d-1 util-linux=2.36.1-2 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201210T083846Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d atropos=1.1.29+dfsg-1 && mkdir -p /build/atropos-HWtehS && dpkg-source --no-check -x /*.dsc /build/atropos-HWtehS/atropos-1.1.29+dfsg && chown -R builduser:builduser /build/atropos-HWtehS" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/atropos-HWtehS/atropos-1.1.29+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1607549395" dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/atropos-HWtehS /tmp/atropos-1.1.29+dfsg-1feat8ndv bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20201210T083846Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.qlH3NNw1aZ as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.qlH3NNw1aZ Reading package lists... Building dependency tree... util-linux is already the newest version (2.36.1-2). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20201210T083846Z unstable/main amd64 libfakeroot amd64 1.25.3-1.1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20201210T083846Z unstable/main amd64 fakeroot amd64 1.25.3-1.1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (1123 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4616 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1.1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1.1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1.1_amd64.deb ... Unpacking fakeroot (1.25.3-1.1) ... Setting up libfakeroot:amd64 (1.25.3-1.1) ... Setting up fakeroot (1.25.3-1.1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-5) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201210T083846Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.qlH3NNw1aZ Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20201210T083846Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 22s (1010 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.qlH3NNw1aZ I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d atropos=1.1.29+dfsg-1 && mkdir -p /build/atropos-HWtehS && dpkg-source --no-check -x /*.dsc /build/atropos-HWtehS/atropos-1.1.29+dfsg && chown -R builduser:builduser /build/atropos-HWtehS"' exec /tmp/mmdebstrap.qlH3NNw1aZ Reading package lists... NOTICE: 'atropos' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/atropos.git Please use: git clone https://salsa.debian.org/med-team/atropos.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 3125 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main atropos 1.1.29+dfsg-1 (dsc) [2107 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main atropos 1.1.29+dfsg-1 (tar) [3117 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main atropos 1.1.29+dfsg-1 (diff) [5172 B] Fetched 3125 kB in 3s (1198 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'atropos_1.1.29+dfsg-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting atropos in /build/atropos-HWtehS/atropos-1.1.29+dfsg dpkg-source: info: unpacking atropos_1.1.29+dfsg.orig.tar.xz dpkg-source: info: unpacking atropos_1.1.29+dfsg-1.debian.tar.xz I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/atropos-HWtehS/atropos-1.1.29+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1607549395" dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.qlH3NNw1aZ dpkg-buildpackage: info: source package atropos dpkg-buildpackage: info: source version 1.1.29+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steffen Moeller dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/atropos-HWtehS/atropos-1.1.29+dfsg' dh_auto_clean I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it rm -rf .pytest_cache rm -rf atropos.egg-info rm -f atropos/align/_align.c atropos/commands/trim/_qualtrim.c atropos/io/_seqio.c make[1]: Leaving directory '/build/atropos-HWtehS/atropos-1.1.29+dfsg' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules build-arch dh build-arch --with python3 --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py config running config dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos copying atropos/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos copying atropos/_version.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_atropos.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_filters.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_multicore.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_commands.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_paired.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_seqio.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_adapters.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_qualtrim.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_colorspace.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_trim.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/utils.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_xopen.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_modifiers.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests copying tests/test_align.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io copying atropos/io/seqio.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io copying atropos/io/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io copying atropos/io/progress.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io copying atropos/io/compression.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/adapters copying atropos/adapters/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/adapters creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/align copying atropos/align/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/align creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/util copying atropos/util/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/util copying atropos/util/colorspace.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/util creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands copying atropos/commands/multicore.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands copying atropos/commands/cli.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands copying atropos/commands/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands copying atropos/commands/stats.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands copying atropos/commands/legacy_report.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands copying atropos/commands/base.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands copying atropos/commands/reports.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim copying atropos/commands/trim/multicore.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim copying atropos/commands/trim/cli.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim copying atropos/commands/trim/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim copying atropos/commands/trim/modifiers.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim copying atropos/commands/trim/writers.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim copying atropos/commands/trim/qualtrim.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim copying atropos/commands/trim/filters.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim copying atropos/commands/trim/reports.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/detect copying atropos/commands/detect/cli.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/detect copying atropos/commands/detect/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/detect copying atropos/commands/detect/reports.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/detect creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/qc copying atropos/commands/qc/cli.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/qc copying atropos/commands/qc/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/qc copying atropos/commands/qc/reports.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/qc creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/error copying atropos/commands/error/cli.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/error copying atropos/commands/error/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/error copying atropos/commands/error/reports.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/error copying atropos/adapters/sequencing_adapters.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/adapters UPDATING /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/_version.py set /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/_version.py to '1.1.29' running build_ext /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/atropos-HWtehS/atropos-1.1.29+dfsg/atropos/align/_align.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/atropos-HWtehS/atropos-1.1.29+dfsg/atropos/commands/trim/_qualtrim.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/atropos-HWtehS/atropos-1.1.29+dfsg/atropos/io/_seqio.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling atropos/align/_align.pyx because it changed. Compiling atropos/commands/trim/_qualtrim.pyx because it changed. Compiling atropos/io/_seqio.pyx because it changed. [1/3] Cythonizing atropos/align/_align.pyx [2/3] Cythonizing atropos/commands/trim/_qualtrim.pyx [3/3] Cythonizing atropos/io/_seqio.pyx building 'atropos.align._align' extension creating build creating build/temp.linux-x86_64-3.9 creating build/temp.linux-x86_64-3.9/atropos creating build/temp.linux-x86_64-3.9/atropos/align x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/atropos-HWtehS/atropos-1.1.29+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c atropos/align/_align.c -o build/temp.linux-x86_64-3.9/atropos/align/_align.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/atropos-HWtehS/atropos-1.1.29+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/atropos/align/_align.o -o /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/align/_align.cpython-39-x86_64-linux-gnu.so building 'atropos.commands.trim._qualtrim' extension creating build/temp.linux-x86_64-3.9/atropos/commands creating build/temp.linux-x86_64-3.9/atropos/commands/trim x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/atropos-HWtehS/atropos-1.1.29+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c atropos/commands/trim/_qualtrim.c -o build/temp.linux-x86_64-3.9/atropos/commands/trim/_qualtrim.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/atropos-HWtehS/atropos-1.1.29+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/atropos/commands/trim/_qualtrim.o -o /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/_qualtrim.cpython-39-x86_64-linux-gnu.so building 'atropos.io._seqio' extension creating build/temp.linux-x86_64-3.9/atropos/io x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/atropos-HWtehS/atropos-1.1.29+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c atropos/io/_seqio.c -o build/temp.linux-x86_64-3.9/atropos/io/_seqio.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/atropos-HWtehS/atropos-1.1.29+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/atropos/io/_seqio.o -o /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io/_seqio.cpython-39-x86_64-linux-gnu.so running build_scripts creating build/scripts-3.9 copying and adjusting bin/atropos -> build/scripts-3.9 changing mode of build/scripts-3.9/atropos from 644 to 755 debian/rules override_dh_auto_test make[1]: Entering directory '/build/atropos-HWtehS/atropos-1.1.29+dfsg' \ dh_auto_test -- --before-test="ln -s /build/atropos-HWtehS/atropos-1.1.29+dfsg/tests/cut {build_dir}/tests && ln -s /build/atropos-HWtehS/atropos-1.1.29+dfsg/tests/data {build_dir}/tests" I: pybuild pybuild:284: ln -s /build/atropos-HWtehS/atropos-1.1.29+dfsg/tests/cut /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests && ln -s /build/atropos-HWtehS/atropos-1.1.29+dfsg/tests/data /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests I: pybuild base:232: cd /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build; python3.9 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.9.1, pytest-4.6.11, py-1.9.0, pluggy-0.13.0 rootdir: /build/atropos-HWtehS/atropos-1.1.29+dfsg, inifile: pytest.ini collected 224 items tests/test_adapters.py ........ [ 3%] tests/test_align.py ................ [ 10%] tests/test_atropos.py .................................................. [ 33%] ............................s [ 45%] tests/test_colorspace.py ................. [ 53%] tests/test_commands.py . [ 54%] tests/test_filters.py .. [ 54%] tests/test_modifiers.py .................... [ 63%] tests/test_multicore.py ..... [ 66%] tests/test_paired.py .................................. [ 81%] tests/test_qualtrim.py . [ 81%] tests/test_seqio.py ................................... [ 97%] tests/test_trim.py .. [ 98%] tests/test_xopen.py .... [100%] =============================== warnings summary =============================== atropos/util/__init__.py:3 atropos/util/__init__.py:3 /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/util/__init__.py:3: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated since Python 3.3, and in 3.10 it will stop working from collections import OrderedDict, Iterable, Sequence /usr/lib/python3/dist-packages/_pytest/mark/structures.py:331 /usr/lib/python3/dist-packages/_pytest/mark/structures.py:331: PytestUnknownMarkWarning: Unknown pytest.mark.timeout - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/latest/mark.html warnings.warn( -- Docs: https://docs.pytest.org/en/latest/warnings.html ============== 223 passed, 1 skipped, 3 warnings in 40.62 seconds ============== make[1]: Leaving directory '/build/atropos-HWtehS/atropos-1.1.29+dfsg' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with python3 --buildsystem=pybuild dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install -a -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos running install running build running build_py UPDATING /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/_version.py set /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/_version.py to '1.1.29' running build_ext running build_scripts running install_lib creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9 creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io/_seqio.cpython-39-x86_64-linux-gnu.so -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io/seqio.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io/progress.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io/compression.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io/__pycache__/__init__.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io/__pycache__/compression.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/io/__pycache__/seqio.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/_version.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/adapters copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/adapters/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/adapters copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/adapters/sequencing_adapters.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/adapters creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/adapters/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/adapters/__pycache__/__init__.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/adapters/__pycache__ creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/align copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/align/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/align copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/align/_align.cpython-39-x86_64-linux-gnu.so -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/align creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/align/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/align/__pycache__/__init__.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/align/__pycache__ creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/util copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/util/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/util copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/util/colorspace.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/util creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/util/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/util/__pycache__/__init__.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/util/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/util/__pycache__/colorspace.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/util/__pycache__ creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/__pycache__/_version.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/__pycache__/__init__.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/__pycache__ creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/multicore.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/cli.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/multicore.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/cli.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/modifiers.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/_qualtrim.cpython-39-x86_64-linux-gnu.so -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/writers.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/qualtrim.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/__pycache__/modifiers.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/__pycache__/reports.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/__pycache__/multicore.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/__pycache__/__init__.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/__pycache__/qualtrim.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/__pycache__/cli.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/__pycache__/writers.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/__pycache__/filters.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/filters.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/trim/reports.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/detect copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/detect/cli.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/detect copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/detect/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/detect creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/detect/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/detect/__pycache__/__init__.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/detect/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/detect/__pycache__/cli.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/detect/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/detect/reports.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/detect copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/stats.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/qc copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/qc/cli.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/qc copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/qc/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/qc creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/qc/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/qc/__pycache__/__init__.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/qc/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/qc/__pycache__/cli.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/qc/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/qc/reports.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/qc copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/legacy_report.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/base.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/error copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/error/cli.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/error copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/error/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/error creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/error/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/error/__pycache__/__init__.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/error/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/error/__pycache__/cli.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/error/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/error/reports.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/error creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/__pycache__/stats.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/__pycache__/legacy_report.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/__pycache__/reports.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/__pycache__/multicore.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/__pycache__/base.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/__pycache__/__init__.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/__pycache__/cli.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/atropos/commands/reports.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/.adapters -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_atropos.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_filters.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_multicore.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_commands.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__init__.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_paired.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_seqio.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_adapters.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/testtmp copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/testtmp/tmp2-out.2.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/testtmp copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/testtmp/tmp2-out.2.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/testtmp copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/testtmp/tmp1-out.1.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/testtmp copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/testtmp/tmp1-out.1.0.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/testtmp copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/testtmp/truncated.gz -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/testtmp copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/testtmp/tmp2-out.2.0.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/testtmp copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/testtmp/tmp1-out.1.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/testtmp copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_qualtrim.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_colorspace.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/stripped.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/empty.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-too-short.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_bis1_insert.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/maxlen.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solid.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/discard.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/restfront.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/overlapb.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/illumina5.info.txt -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/illumina5.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solid5p-anchored.notrim.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/unconditional-both.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/small.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-separate.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_insert.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/interleaved.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/lowqual.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/insert.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-m27.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/pairedq.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/s_1_sequence.txt -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/examplefront.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/minlen.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/issue68.1.fq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-m27.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solid-no-zerocap.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/back_repeat.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/twoadapters.unknown.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/nextseq.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-trimmed.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/small.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/twoadapters.first.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/small.trimmed.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/rest.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/overlapa.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/highq.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/no-trim.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_bis1_insert.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/pairedu.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/illumina.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired.m14.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/anywhere_repeat.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-filterboth_adapter.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/wildcard_adapter_anywhere.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solid5p.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/illumina.info.txt -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-untrimmed.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_insert.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/issue46.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/wildcard.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-onlyA.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/linked.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/pairedu.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-filterboth.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-too-short.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/maxn2.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/small.untrimmed.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/SRR2040662_trimmed.fq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/discard-untrimmed.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/insert.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-filterboth.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/illumina64.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solid5p-anchored.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/maxn0.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_bis2_insert.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_bis1_adapter.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/suffix.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/pairedq.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_adapter.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/no_indels.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/wildcard_adapter.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/454.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/sra.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_adapter.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_bis1_adapter.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solidqual.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solidmaq.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-filterboth_insert.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/maxn1.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/unconditional-front.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solid.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-onlyA.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/polya.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/lowercase.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-separate.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/small_mincut2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/small_mincut3.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/lowq.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-filterboth_adapter.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/dos.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solid5p.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/example.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_bis2_adapter.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solid5p-anchored.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/twoadapters.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_bis2_adapter.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/back_repeat.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/wildcardN.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired.m14.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-filterboth_insert.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/anchored_no_indels_wildcard.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/anchored-back.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/maxn0.4.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-trimmed.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/issue68.2.fq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/anchored_no_indels.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/minlen.noprimer.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solidbfast.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/plus.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/trimN3.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired-untrimmed.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/small_mincut1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/solid5p-anchored.notrim.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/twoadapters.second.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/unconditional-back.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/anchored.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/trimN5.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/maxn0.2.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/cut/paired_bis2_insert.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/cut copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_trim.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/empty.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/solid.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/paired.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/tooshort.noprimer.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/overlapb.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/illumina5.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/solid.qual -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/rest.txt -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/small.fastq.gz -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/interleaved.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/E3M.qual -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/lowqual.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/insert.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/solid.csfasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/issue68.1.fq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/adapter.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/back_repeat.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/nextseq.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/small.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/rest.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/overlapa.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/highq.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/bad_bases.fq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/illumina.fastq.gz -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/paired.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/paired_bis_insert.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/anywhere_repeat.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/solid5p.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/big.2.fq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/tooshort.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/small.fastq.xz -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/issue46.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/wildcard.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/linked.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/multiblock.fastq.gz -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/insert.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/illumina64.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/no_indels.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/wildcard_adapter.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/paired_bis_insert.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/454.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/simple.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/sra.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/suffix-adapter.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/restfront.txt -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/solid.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/polya.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/withplus.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/lowq.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/dos.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/small.fastq.bz2 -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/solid5p.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/prefix-adapter.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/example.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/big.1.fq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/paired_bis_adapter.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/twoadapters.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/toolong.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/back_repeat.1.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/paired_bis_adapter.2.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/wildcardN.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/anchored-back.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/simple.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/lengths.fa -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/maxn.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/issue68.2.fq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/anchored_no_indels.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/small.myownextension -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/plus.fastq -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/s_1_sequence.txt.gz -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/trimN3.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/E3M.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/anchored.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/data/trimN5.fasta -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/data copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/utils.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_xopen.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/utils.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_adapters.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_modifiers.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_atropos.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_commands.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_xopen.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_qualtrim.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_multicore.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_filters.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_paired.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_trim.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_align.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/__init__.cpython-39.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_seqio.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/__pycache__/test_colorspace.cpython-39-PYTEST.pyc -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__pycache__ copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_modifiers.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests copying /build/atropos-HWtehS/atropos-1.1.29+dfsg/.pybuild/cpython3_3.9/build/tests/test_align.py -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/__init__.py to __init__.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io/seqio.py to seqio.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io/__init__.py to __init__.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io/progress.py to progress.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/io/compression.py to compression.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/_version.py to _version.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/adapters/__init__.py to __init__.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/align/__init__.py to __init__.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/util/__init__.py to __init__.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/util/colorspace.py to colorspace.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/multicore.py to multicore.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/cli.py to cli.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/__init__.py to __init__.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/multicore.py to multicore.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/cli.py to cli.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/__init__.py to __init__.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/modifiers.py to modifiers.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/writers.py to writers.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/qualtrim.py to qualtrim.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/filters.py to filters.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/trim/reports.py to reports.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/detect/cli.py to cli.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/detect/__init__.py to __init__.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/detect/reports.py to reports.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/stats.py to stats.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/qc/cli.py to cli.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/qc/__init__.py to __init__.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/qc/reports.py to reports.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/legacy_report.py to legacy_report.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/base.py to base.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/error/cli.py to cli.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/error/__init__.py to __init__.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/error/reports.py to reports.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos/commands/reports.py to reports.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_atropos.py to test_atropos.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_filters.py to test_filters.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_multicore.py to test_multicore.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_commands.py to test_commands.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/__init__.py to __init__.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_paired.py to test_paired.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_seqio.py to test_seqio.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_adapters.py to test_adapters.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_qualtrim.py to test_qualtrim.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_colorspace.py to test_colorspace.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_trim.py to test_trim.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/utils.py to utils.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_xopen.py to test_xopen.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_modifiers.py to test_modifiers.cpython-39.pyc byte-compiling /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/tests/test_align.py to test_align.cpython-39.pyc running install_egg_info running egg_info creating atropos.egg-info writing atropos.egg-info/PKG-INFO writing dependency_links to atropos.egg-info/dependency_links.txt writing requirements to atropos.egg-info/requires.txt writing top-level names to atropos.egg-info/top_level.txt writing manifest file 'atropos.egg-info/SOURCES.txt' reading manifest file 'atropos.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'README.rst' warning: no files found matching 'LICENSE.txt' warning: no files found matching 'atropos/report/templates/*' writing manifest file 'atropos.egg-info/SOURCES.txt' Copying atropos.egg-info to /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/lib/python3.9/dist-packages/atropos-1.1.29.egg-info Skipping SOURCES.txt running install_scripts creating /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/bin copying build/scripts-3.9/atropos -> /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/bin changing mode of /build/atropos-HWtehS/atropos-1.1.29+dfsg/debian/atropos/usr/bin/atropos to 755 debian/rules override_dh_install make[1]: Entering directory '/build/atropos-HWtehS/atropos-1.1.29+dfsg' dh_install find debian -type d -name __pycache__ | xargs rm -rf find debian -type d -name tests | xargs rm -rf find debian -type f -name .adapters -delete make[1]: Leaving directory '/build/atropos-HWtehS/atropos-1.1.29+dfsg' dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_installman -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild dh_installinit -a -O--buildsystem=pybuild dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: package atropos: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package atropos: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'atropos-dbgsym' in '../atropos-dbgsym_1.1.29+dfsg-1_amd64.deb'. dpkg-deb: building package 'atropos' in '../atropos_1.1.29+dfsg-1_amd64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../atropos_1.1.29+dfsg-1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/atropos-HWtehS /tmp/atropos-1.1.29+dfsg-1feat8ndv I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.qlH3NNw1aZ... I: success in 458.6870 seconds md5: atropos-dbgsym_1.1.29+dfsg-1_amd64.deb: OK md5: atropos_1.1.29+dfsg-1_amd64.deb: OK sha1: atropos-dbgsym_1.1.29+dfsg-1_amd64.deb: OK sha1: atropos_1.1.29+dfsg-1_amd64.deb: OK sha256: atropos-dbgsym_1.1.29+dfsg-1_amd64.deb: OK sha256: atropos_1.1.29+dfsg-1_amd64.deb: OK Checksums: OK