Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/a/apophenia/apophenia_1.0+ds-8+b1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/apophenia-1.0+ds-8+b1_bpyaf_7/apophenia_1.0+ds-8+b1_amd64.buildinfo Get source package info: apophenia=1.0+ds-8 Source URL: http://snapshot.notset.fr/mr/package/apophenia/1.0+ds-8/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11.1 autoconf-archive=20190106-2.1 automake=1:1.16.2-1 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.47 bash=5.0-6 bc=1.07.1-2+b2 binutils=2.34-6 binutils-common=2.34-6 binutils-x86-64-linux-gnu=2.34-6 bsdmainutils=11.1.2+b1 bsdutils=1:2.35.1-2 build-essential=12.8 bzip2=1.0.8-2 coreutils=8.30-3+b1 cpp=4:9.2.1-3.1 cpp-9=9.3.0-11 dash=0.5.10.2-7 debconf=1.5.74 debhelper=13 debianutils=4.9.1 default-libmysqlclient-dev=1.0.5 dh-autoreconf=19 dh-strip-nondeterminism=1.8.0-1 diffutils=1:3.7-3 dpkg=1.19.7 dpkg-dev=1.19.7 dwz=0.13-5 file=1:5.38-4 findutils=4.7.0-1 g++=4:9.2.1-3.1 g++-9=9.3.0-11 gcc=4:9.2.1-3.1 gcc-10-base=10-20200502-1 gcc-9=9.3.0-11 gcc-9-base=9.3.0-11 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 gnulib=20200505~0747bf0-1 grep=3.4-1 groff-base=1.22.4-5 gzip=1.10-2 help2man=1.47.15 hostname=3.23 init-system-helpers=1.57 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libasan5=9.3.0-11 libatomic1=10-20200502-1 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3 libaudit1=1:2.8.5-3+b1 libbinutils=2.34-6 libblkid1=2.35.1-2 libbsd0=0.10.0-1 libbz2-1.0=1.0.8-2 libc-bin=2.30-7 libc-dev-bin=2.30-7 libc6=2.30-7 libc6-dev=2.30-7 libcap-ng0=0.7.9-2.1+b2 libcc1-0=10-20200502-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.16-1 libcrypt1=1:4.4.16-1 libctf-nobfd0=2.34-6 libctf0=2.34-6 libdb5.3=5.3.28+dfsg1-0.6 libdebconfclient0=0.251 libdebhelper-perl=13 libdpkg-perl=1.19.7 libelf1=0.176-1.1 libevent-2.1-7=2.1.11-stable-1 libffi7=3.3-4 libfile-stripnondeterminism-perl=1.8.0-1 libgcc-9-dev=9.3.0-11 libgcc-s1=10-20200502-1 libgcrypt20=1.8.5-5 libgdbm-compat4=1.18.1-5 libgdbm6=1.18.1-5 libglib2.0-0=2.64.2-1 libgmp-dev=2:6.2.0+dfsg-4 libgmp10=2:6.2.0+dfsg-4 libgmpxx4ldbl=2:6.2.0+dfsg-4 libgnutls-dane0=3.6.13-2 libgnutls-openssl27=3.6.13-2 libgnutls28-dev=3.6.13-2 libgnutls30=3.6.13-2 libgnutlsxx28=3.6.13-2 libgomp1=10-20200502-1 libgpg-error0=1.37-1 libgsl-dev=2.6+dfsg-2 libgsl25=2.6+dfsg-2 libgslcblas0=2.6+dfsg-2 libhogweed5=3.5.1+really3.5.1-2 libicu63=63.2-3 libidn2-0=2.3.0-1 libidn2-dev=2.3.0-1 libisl22=0.22.1-1 libitm1=10-20200502-1 liblocale-gettext-perl=1.07-4 liblsan0=10-20200502-1 liblz4-1=1.9.2-2 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.38-4 libmagic1=1:5.38-4 libmariadb-dev=1:10.3.22-1 libmariadb-dev-compat=1:10.3.22-1 libmariadb3=1:10.3.22-1 libmount1=2.35.1-2 libmpc3=1.1.0-1 libmpfr6=4.0.2-1 libncurses6=6.2-1 libnettle7=3.5.1+really3.5.1-2 libp11-kit-dev=0.23.20-1 libp11-kit0=0.23.20-1 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpcre2-8-0=10.34-7 libpcre3=2:8.39-12+b1 libperl5.30=5.30.0-10 libpipeline1=1.5.2-2 libquadmath0=10-20200502-1 libreadline8=8.0-4 libseccomp2=2.4.3-1+b1 libselinux1=3.0-1+b3 libsigsegv2=2.12-2 libsmartcols1=2.35.1-2 libsqlite3-0=3.31.1-5 libsqlite3-dev=3.31.1-5 libstdc++-9-dev=9.3.0-11 libstdc++6=10-20200502-1 libsub-override-perl=0.09-2 libsystemd0=245.5-2 libtasn1-6=4.16.0-2 libtasn1-6-dev=4.16.0-2 libtinfo6=6.2-1 libtool=2.4.6-14 libtsan0=10-20200502-1 libubsan1=10-20200502-1 libuchardet0=0.0.6-3 libudev1=245.5-2 libunbound8=1.10.0-1 libunistring2=0.9.10-2 libuuid1=2.35.1-2 libxml2=2.9.10+dfsg-5 linux-libc-dev=5.6.7-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 make=4.2.1-2 man-db=2.9.1-1 mariadb-common=1:10.3.22-1 mawk=1.3.4.20200120-2 mysql-common=5.8+1.0.5 ncurses-base=6.2-1 ncurses-bin=6.2-1 nettle-dev=3.5.1+really3.5.1-2 patch=2.7.6-6 perl=5.30.0-10 perl-base=5.30.0-10 perl-modules-5.30=5.30.0-10 pkg-config=0.29.2-1 po-debconf=1.0.21 readline-common=8.0-4 sed=4.7-1 sensible-utils=0.0.12+nmu1 sqlite3=3.31.1-5 sysvinit-utils=2.96-3 tar=1.30+dfsg-7 util-linux=2.35.1-2 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20200507T210258Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d apophenia=1.0+ds-8 && mkdir -p /build/apophenia-Y5h7wr && dpkg-source --no-check -x /*.dsc /build/apophenia-Y5h7wr/apophenia-1.0+ds && cd /build/apophenia-Y5h7wr/apophenia-1.0+ds && { printf '%s' 'apophenia (1.0+ds-8+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against libgsl25 -- all/amd64 / i386 Build Daemon (x86-conova-01) Thu, 07 May 2020 20:03:42 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/apophenia-Y5h7wr" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/apophenia-Y5h7wr/apophenia-1.0+ds && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1588881822" dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/apophenia-Y5h7wr /tmp/apophenia-1.0+ds-8+b1_bpyaf_7 bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20200507T210258Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.3nzRwZlmCg as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.3nzRwZlmCg Reading package lists... Building dependency tree... util-linux is already the newest version (2.35.1-2). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 132 kB of archives. After this operation, 393 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20200507T210258Z unstable/main amd64 libfakeroot amd64 1.24-1 [45.7 kB] Get:2 http://snapshot.notset.fr/archive/debian/20200507T210258Z unstable/main amd64 fakeroot amd64 1.24-1 [85.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 132 kB in 0s (1070 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4482 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.24-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.24-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.24-1_amd64.deb ... Unpacking fakeroot (1.24-1) ... Setting up libfakeroot:amd64 (1.24-1) ... Setting up fakeroot (1.24-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.30-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20200507T210258Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.3nzRwZlmCg Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20200507T210258Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 19s (1158 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.3nzRwZlmCg I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d apophenia=1.0+ds-8 && mkdir -p /build/apophenia-Y5h7wr && dpkg-source --no-check -x /*.dsc /build/apophenia-Y5h7wr/apophenia-1.0+ds && cd /build/apophenia-Y5h7wr/apophenia-1.0+ds && { printf '%s' 'apophenia (1.0+ds-8+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against libgsl25 -- all/amd64 / i386 Build Daemon (x86-conova-01) Thu, 07 May 2020 20:03:42 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/apophenia-Y5h7wr"' exec /tmp/mmdebstrap.3nzRwZlmCg Reading package lists... NOTICE: 'apophenia' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/apophenia.git Please use: git clone https://salsa.debian.org/science-team/apophenia.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 543 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main apophenia 1.0+ds-8 (dsc) [3115 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main apophenia 1.0+ds-8 (tar) [526 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main apophenia 1.0+ds-8 (diff) [13.2 kB] Fetched 543 kB in 1s (1025 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'apophenia_1.0+ds-8.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting apophenia in /build/apophenia-Y5h7wr/apophenia-1.0+ds dpkg-source: info: unpacking apophenia_1.0+ds.orig.tar.gz dpkg-source: info: unpacking apophenia_1.0+ds-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying upstream-fix-implicit-model-ols_log_likelihood.patch dpkg-source: info: applying upstream-mysql-8.0.patch dpkg-source: info: applying upstream-bug-793998-tests_distribution_tests-2.patch dpkg-source: info: applying upstream-fix-typo.patch dpkg-source: info: applying upstream-enhancement-eg_test_updating.patch dpkg-source: info: applying upstream-correction-spelling-error-in-source.patch dpkg-source: info: applying debianization.patch dpkg-source: info: applying debianization-help2man.patch dpkg-source: info: applying debianization-documentation.patch dpkg-source: info: applying debianization-bug-597187_757967_841636-mysql_config.patch dpkg-source: info: applying debianization-adhoc.patch dpkg-source: info: applying debianization-bug-gcc9-XXX.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/apophenia-Y5h7wr/apophenia-1.0+ds && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1588881822" dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.3nzRwZlmCg dpkg-buildpackage: info: source package apophenia dpkg-buildpackage: info: source version 1.0+ds-8+b1 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by all/amd64 / i386 Build Daemon (x86-conova-01) dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --builddirectory=_build dh_auto_clean -O--builddirectory=_build dh_autoreconf_clean -O--builddirectory=_build dh_clean -O--builddirectory=_build debian/rules build-arch dh build-arch --builddirectory=_build dh_update_autotools_config -a -O--builddirectory=_build dh_autoreconf -a -O--builddirectory=_build aclocal: warning: couldn't open directory 'm4': No such file or directory libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-aux'. libtoolize: copying file 'build-aux/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:19: installing 'build-aux/compile' configure.ac:19: installing 'build-aux/config.guess' configure.ac:19: installing 'build-aux/config.sub' configure.ac:12: installing 'build-aux/install-sh' configure.ac:12: installing 'build-aux/missing' Makefile.am: installing 'build-aux/depcomp' cmd/Makefile.am:27: warning: '%'-style pattern rules are a GNU make extension docs/Makefile.am:84: warning: '%'-style pattern rules are a GNU make extension automake: warning: source file '$(top_builddir)/eg/apop_map_row.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/apop_map_row' automake: warning: possible forward-incompatibility. automake: At least a source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, automake: this behaviour will change in future Automake versions: they will automake: unconditionally cause object files to be placed in the same subdirectory automake: of the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. automake: warning: source file '$(top_builddir)/eg/binning.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/binning' automake: warning: source file '$(top_builddir)/eg/boot_clt.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/boot_clt' automake: warning: source file '$(top_builddir)/eg/cross_models.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/cross_models' automake: warning: source file '$(top_builddir)/eg/data_fill.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/data_fill' automake: warning: source file '$(top_builddir)/eg/db_fns.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/db_fns' automake: warning: source file '$(top_builddir)/eg/dconstrain.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/dconstrain' automake: warning: source file '$(top_builddir)/eg/dot_products.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/dot_products' automake: warning: source file '$(top_builddir)/eg/draw_to_db.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/draw_to_db' automake: warning: source file '$(top_builddir)/eg/entropy_model.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/entropy_model' automake: warning: source file '$(top_builddir)/eg/entropy_vector.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/entropy_vector' automake: warning: source file '$(top_builddir)/eg/f_test.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/f_test' automake: warning: source file '$(top_builddir)/eg/fake_logit.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/fake_logit' automake: warning: source file '$(top_builddir)/eg/fix_params.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/fix_params' automake: warning: source file '$(top_builddir)/eg/hills2.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/hills2' automake: warning: source file '$(top_builddir)/eg/iv.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/iv' automake: warning: source file '$(top_builddir)/eg/jack.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/jack' automake: warning: source file '$(top_builddir)/eg/jacobian.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/jacobian' automake: warning: source file '$(top_builddir)/eg/ks_tests.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/ks_tests' automake: warning: source file '$(top_builddir)/eg/logit.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/logit' automake: warning: source file '$(top_builddir)/eg/ml_imputation.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/ml_imputation' automake: warning: source file '$(top_builddir)/eg/normalization_demo.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/normalization_demo' automake: warning: source file '$(top_builddir)/eg/ols.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/ols' automake: warning: source file '$(top_builddir)/eg/ols_oneliner.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/ols_oneliner' automake: warning: source file '$(top_builddir)/eg/parameterization.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/parameterization' automake: warning: source file '$(top_builddir)/eg/pmf_test.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/pmf_test' automake: warning: source file '$(top_builddir)/eg/simple_subsets.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/simple_subsets' automake: warning: source file '$(top_builddir)/eg/some_cdfs.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/some_cdfs' automake: warning: source file '$(top_builddir)/eg/t_test_by_rows.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/t_test_by_rows' automake: warning: source file '$(top_builddir)/eg/test_distances.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_distances' automake: warning: source file '$(top_builddir)/eg/test_fisher.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_fisher' automake: warning: source file '$(top_builddir)/eg/test_harmonic.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_harmonic' automake: warning: source file '$(top_builddir)/eg/test_kl_divergence.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/test_kl_divergence' automake: warning: source file '$(top_builddir)/eg/test_pruning.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_pruning' automake: warning: source file '$(top_builddir)/eg/test_ranks.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/test_ranks' automake: warning: source file '$(top_builddir)/eg/test_regex.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:27: while processing program '$(top_builddir)/eg/test_regex' automake: warning: source file '$(top_builddir)/eg/test_updating.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/test_updating' automake: warning: source file '$(top_builddir)/eg/transform.c' is in a subdirectory, automake: but option 'subdir-objects' is disabled tests/Makefile.am:3: while processing program '$(top_builddir)/eg/transform' parallel-tests: installing 'build-aux/test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds' dh_auto_configure -- --enable-maintainer-mode cd _build && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-maintainer-mode checking whether make supports nested variables... yes checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether to enable maintainer-specific portions of Makefiles... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking if LD -Wl,--version-script works... yes checking for help2man... /usr/bin/help2man checking whether gcc is Clang... no checking whether pthreads work with -pthread... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking whether more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking for gcc option to support OpenMP... -fopenmp checking for cos in -lm... yes checking for gsl-config... /usr/bin/gsl-config checking for GSL - version >= 1.12.0... yes checking for mysql_config... /usr/bin/mysql_config checking for SQLite3 library >= 3.0.0... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking for ANSI C header files... (cached) yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking wchar.h usability... yes checking wchar.h presence... yes checking for wchar.h... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for size_t... (cached) yes checking whether struct tm is in sys/time.h or time.h... time.h checking for ptrdiff_t... yes checking for __attribute__... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for working strtod... yes checking for floor... no checking for memset... yes checking for pow... no checking for regcomp... yes checking for sqrt... no checking for strcasecmp... yes checking for asprintf... yes checking for bc... /usr/bin/bc checking for sqlite3... /usr/bin/sqlite3 checking whether to run extended tests... no dpkg-parsechangelog: error: cannot open file debian/changelog: No such file or directory checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating apophenia.pc config.status: creating apop.h config.status: creating Makefile config.status: creating transform/Makefile config.status: creating model/Makefile config.status: creating cmd/Makefile config.status: creating tests/Makefile config.status: creating docs/doxygen.conf config.status: creating docs/Makefile config.status: creating eg/Makefile config.status: creating tests/utilities_test config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds' dh_auto_build -a -O--builddirectory=_build cd _build && make -j4 make[1]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' make all-recursive make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' Making all in transform make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/transform' /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_dconstrain.lo `test -f 'apop_dconstrain.c' || echo '../../transform/'`apop_dconstrain.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_fix_params.lo `test -f 'apop_fix_params.c' || echo '../../transform/'`apop_fix_params.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_coordinate_transform.lo `test -f 'apop_coordinate_transform.c' || echo '../../transform/'`apop_coordinate_transform.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_mixture.lo `test -f 'apop_mixture.c' || echo '../../transform/'`apop_mixture.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_dconstrain.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_dconstrain.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_fix_params.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_fix_params.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_coordinate_transform.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_coordinate_transform.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_mixture.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_mixture.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_coordinate_transform.c -o libapoptransform_la-apop_coordinate_transform.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_dconstrain.c -o libapoptransform_la-apop_dconstrain.o >/dev/null 2>&1 ../../transform/apop_fix_params.c: In function ‘apop_model_fix_params’: ../../transform/apop_fix_params.c:266:39: warning: ‘, with some params fixed’ directive output may be truncated writing 24 bytes into a region of size between 0 and 100 [-Wformat-truncation=] 266 | snprintf(model_out->name, 100, "%s, with some params fixed", model_in->name); | ^~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/gsl/gsl_errno.h:23, from /usr/include/gsl/gsl_rng.h:24, from ../apop.h:32, from ../../apop_internal.h:83, from ../../transform/apop_fix_params.c:8: /usr/include/x86_64-linux-gnu/bits/stdio2.h:67:10: note: ‘__builtin___snprintf_chk’ output between 25 and 125 bytes into a destination of size 100 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_mixture.c -o libapoptransform_la-apop_mixture.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapoptransform_la-apop_cross.lo `test -f 'apop_cross.c' || echo '../../transform/'`apop_cross.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_fix_params.c -o libapoptransform_la-apop_fix_params.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_cross.c -fPIC -DPIC -o .libs/libapoptransform_la-apop_cross.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../transform -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../transform/apop_cross.c -o libapoptransform_la-apop_cross.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o libapoptransform.la libapoptransform_la-apop_dconstrain.lo libapoptransform_la-apop_fix_params.lo libapoptransform_la-apop_coordinate_transform.lo libapoptransform_la-apop_mixture.lo libapoptransform_la-apop_cross.lo libtool: link: ar cr .libs/libapoptransform.a .libs/libapoptransform_la-apop_dconstrain.o .libs/libapoptransform_la-apop_fix_params.o .libs/libapoptransform_la-apop_coordinate_transform.o .libs/libapoptransform_la-apop_mixture.o .libs/libapoptransform_la-apop_cross.o libtool: link: ranlib .libs/libapoptransform.a libtool: link: ( cd ".libs" && rm -f "libapoptransform.la" && ln -s "../libapoptransform.la" "libapoptransform.la" ) make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/transform' Making all in model make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/model' /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_bernoulli.lo `test -f 'apop_bernoulli.c' || echo '../../model/'`apop_bernoulli.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_beta.lo `test -f 'apop_beta.c' || echo '../../model/'`apop_beta.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_dirichlet.lo `test -f 'apop_dirichlet.c' || echo '../../model/'`apop_dirichlet.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_exponential.lo `test -f 'apop_exponential.c' || echo '../../model/'`apop_exponential.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_bernoulli.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_bernoulli.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_beta.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_beta.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_dirichlet.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_dirichlet.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_exponential.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_exponential.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_dirichlet.c -o libapopmodel_la-apop_dirichlet.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_exponential.c -o libapopmodel_la-apop_exponential.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_bernoulli.c -o libapopmodel_la-apop_bernoulli.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_beta.c -o libapopmodel_la-apop_beta.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_gamma.lo `test -f 'apop_gamma.c' || echo '../../model/'`apop_gamma.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_kerneld.lo `test -f 'apop_kerneld.c' || echo '../../model/'`apop_kerneld.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_gamma.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_gamma.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_loess.lo `test -f 'apop_loess.c' || echo '../../model/'`apop_loess.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_kerneld.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_kerneld.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_loess.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_loess.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_multinomial.lo `test -f 'apop_multinomial.c' || echo '../../model/'`apop_multinomial.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_gamma.c -o libapopmodel_la-apop_gamma.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multinomial.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_multinomial.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_kerneld.c -o libapopmodel_la-apop_kerneld.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_multivariate_normal.lo `test -f 'apop_multivariate_normal.c' || echo '../../model/'`apop_multivariate_normal.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multivariate_normal.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_multivariate_normal.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multinomial.c -o libapopmodel_la-apop_multinomial.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_normal.lo `test -f 'apop_normal.c' || echo '../../model/'`apop_normal.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_multivariate_normal.c -o libapopmodel_la-apop_multivariate_normal.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_normal.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_normal.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_ols.lo `test -f 'apop_ols.c' || echo '../../model/'`apop_ols.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_ols.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_ols.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_pmf.lo `test -f 'apop_pmf.c' || echo '../../model/'`apop_pmf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_pmf.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_pmf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_normal.c -o libapopmodel_la-apop_normal.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_pmf.c -o libapopmodel_la-apop_pmf.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_ols.c -o libapopmodel_la-apop_ols.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_poisson.lo `test -f 'apop_poisson.c' || echo '../../model/'`apop_poisson.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_poisson.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_poisson.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_probit.lo `test -f 'apop_probit.c' || echo '../../model/'`apop_probit.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_poisson.c -o libapopmodel_la-apop_poisson.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_probit.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_probit.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_t.lo `test -f 'apop_t.c' || echo '../../model/'`apop_t.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_t.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_t.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_uniform.lo `test -f 'apop_uniform.c' || echo '../../model/'`apop_uniform.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_uniform.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_uniform.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_t.c -o libapopmodel_la-apop_t.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_probit.c -o libapopmodel_la-apop_probit.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_wishart.lo `test -f 'apop_wishart.c' || echo '../../model/'`apop_wishart.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_uniform.c -o libapopmodel_la-apop_uniform.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_wishart.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_wishart.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_wishart.c -o libapopmodel_la-apop_wishart.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_yule.lo `test -f 'apop_yule.c' || echo '../../model/'`apop_yule.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_yule.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_yule.o /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopmodel_la-apop_zipf.lo `test -f 'apop_zipf.c' || echo '../../model/'`apop_zipf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_zipf.c -fPIC -DPIC -o .libs/libapopmodel_la-apop_zipf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_yule.c -o libapopmodel_la-apop_yule.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_zipf.c -o libapopmodel_la-apop_zipf.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../model -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../../model/apop_loess.c -o libapopmodel_la-apop_loess.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -I ../.. -pthread -fopenmp -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o libapopmodel.la libapopmodel_la-apop_bernoulli.lo libapopmodel_la-apop_beta.lo libapopmodel_la-apop_dirichlet.lo libapopmodel_la-apop_exponential.lo libapopmodel_la-apop_gamma.lo libapopmodel_la-apop_kerneld.lo libapopmodel_la-apop_loess.lo libapopmodel_la-apop_multinomial.lo libapopmodel_la-apop_multivariate_normal.lo libapopmodel_la-apop_normal.lo libapopmodel_la-apop_ols.lo libapopmodel_la-apop_pmf.lo libapopmodel_la-apop_poisson.lo libapopmodel_la-apop_probit.lo libapopmodel_la-apop_t.lo libapopmodel_la-apop_uniform.lo libapopmodel_la-apop_wishart.lo libapopmodel_la-apop_yule.lo libapopmodel_la-apop_zipf.lo libtool: link: ar cr .libs/libapopmodel.a .libs/libapopmodel_la-apop_bernoulli.o .libs/libapopmodel_la-apop_beta.o .libs/libapopmodel_la-apop_dirichlet.o .libs/libapopmodel_la-apop_exponential.o .libs/libapopmodel_la-apop_gamma.o .libs/libapopmodel_la-apop_kerneld.o .libs/libapopmodel_la-apop_loess.o .libs/libapopmodel_la-apop_multinomial.o .libs/libapopmodel_la-apop_multivariate_normal.o .libs/libapopmodel_la-apop_normal.o .libs/libapopmodel_la-apop_ols.o .libs/libapopmodel_la-apop_pmf.o .libs/libapopmodel_la-apop_poisson.o .libs/libapopmodel_la-apop_probit.o .libs/libapopmodel_la-apop_t.o .libs/libapopmodel_la-apop_uniform.o .libs/libapopmodel_la-apop_wishart.o .libs/libapopmodel_la-apop_yule.o .libs/libapopmodel_la-apop_zipf.o libtool: link: ranlib .libs/libapopmodel.a libtool: link: ( cd ".libs" && rm -f "libapopmodel.la" && ln -s "../libapopmodel.la" "libapopmodel.la" ) make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/model' Making all in . make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o asprintf.lo ../asprintf.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_arms.lo `test -f 'apop_arms.c' || echo '../'`apop_arms.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_asst.lo `test -f 'apop_asst.c' || echo '../'`apop_asst.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_bootstrap.lo `test -f 'apop_bootstrap.c' || echo '../'`apop_bootstrap.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../asprintf.c -fPIC -DPIC -o .libs/asprintf.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_arms.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_arms.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_asst.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_asst.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_bootstrap.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_bootstrap.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../asprintf.c -o asprintf.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_conversions.lo `test -f 'apop_conversions.c' || echo '../'`apop_conversions.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_conversions.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_conversions.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_bootstrap.c -o libapopkernel_la-apop_bootstrap.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_asst.c -o libapopkernel_la-apop_asst.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_arms.c -o libapopkernel_la-apop_arms.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_data.lo `test -f 'apop_data.c' || echo '../'`apop_data.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_db.lo `test -f 'apop_db.c' || echo '../'`apop_db.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_data.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_data.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_db.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_db.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_fexact.lo `test -f 'apop_fexact.c' || echo '../'`apop_fexact.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_fexact.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_fexact.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_conversions.c -o libapopkernel_la-apop_conversions.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_data.c -o libapopkernel_la-apop_data.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_db.c -o libapopkernel_la-apop_db.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_hist.lo `test -f 'apop_hist.c' || echo '../'`apop_hist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_hist.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_hist.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_hist.c -o libapopkernel_la-apop_hist.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_fexact.c -o libapopkernel_la-apop_fexact.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_linear_algebra.lo `test -f 'apop_linear_algebra.c' || echo '../'`apop_linear_algebra.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_linear_constraint.lo `test -f 'apop_linear_constraint.c' || echo '../'`apop_linear_constraint.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_constraint.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_linear_constraint.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_algebra.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_linear_algebra.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_mapply.lo `test -f 'apop_mapply.c' || echo '../'`apop_mapply.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mapply.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mapply.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_constraint.c -o libapopkernel_la-apop_linear_constraint.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_linear_algebra.c -o libapopkernel_la-apop_linear_algebra.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_mcmc.lo `test -f 'apop_mcmc.c' || echo '../'`apop_mcmc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mcmc.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mcmc.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mapply.c -o libapopkernel_la-apop_mapply.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_missing_data.lo `test -f 'apop_missing_data.c' || echo '../'`apop_missing_data.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mcmc.c -o libapopkernel_la-apop_mcmc.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_missing_data.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_missing_data.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_missing_data.c -o libapopkernel_la-apop_missing_data.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_mle.lo `test -f 'apop_mle.c' || echo '../'`apop_mle.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_model.lo `test -f 'apop_model.c' || echo '../'`apop_model.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mle.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_mle.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_model.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_model.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_name.lo `test -f 'apop_name.c' || echo '../'`apop_name.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_name.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_name.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_output.lo `test -f 'apop_output.c' || echo '../'`apop_output.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_output.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_output.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_name.c -o libapopkernel_la-apop_name.o >/dev/null 2>&1 ../apop_output.c: In function ‘apop_data_print_core’: ../apop_output.c:260:18: warning: argument 1 null where non-null expected [-Wnonnull] 260 | !strcmp(apop_opts.db_name_column, "row_names")) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ./apop.h:31, from ../apop_internal.h:83, from ../apop_output.c:7: /usr/include/string.h:137:12: note: in a call to function ‘strcmp’ declared here 137 | extern int strcmp (const char *__s1, const char *__s2) | ^~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_model.c -o libapopkernel_la-apop_model.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_output.c -o libapopkernel_la-apop_output.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_rake.lo `test -f 'apop_rake.c' || echo '../'`apop_rake.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_mle.c -o libapopkernel_la-apop_mle.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_rake.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_rake.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_regression.lo `test -f 'apop_regression.c' || echo '../'`apop_regression.c /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_settings.lo `test -f 'apop_settings.c' || echo '../'`apop_settings.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_settings.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_settings.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_regression.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_regression.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_settings.c -o libapopkernel_la-apop_settings.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_sort.lo `test -f 'apop_sort.c' || echo '../'`apop_sort.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_rake.c -o libapopkernel_la-apop_rake.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_sort.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_sort.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_stats.lo `test -f 'apop_stats.c' || echo '../'`apop_stats.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_stats.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_stats.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_regression.c -o libapopkernel_la-apop_regression.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_sort.c -o libapopkernel_la-apop_sort.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_tests.lo `test -f 'apop_tests.c' || echo '../'`apop_tests.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_tests.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_tests.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_update.lo `test -f 'apop_update.c' || echo '../'`apop_update.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_update.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_update.o /bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o libapopkernel_la-apop_vtables.lo `test -f 'apop_vtables.c' || echo '../'`apop_vtables.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_vtables.c -fPIC -DPIC -o .libs/libapopkernel_la-apop_vtables.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_update.c -o libapopkernel_la-apop_update.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_stats.c -o libapopkernel_la-apop_stats.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_vtables.c -o libapopkernel_la-apop_vtables.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c ../apop_tests.c -o libapopkernel_la-apop_tests.o >/dev/null 2>&1 /bin/bash ./libtool --tag=CC --mode=link gcc -pthread -fopenmp -I/usr/include/mariadb -I/usr/include/mariadb/mysql -I/usr/include -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o libapopkernel.la libapopkernel_la-apop_arms.lo libapopkernel_la-apop_asst.lo libapopkernel_la-apop_bootstrap.lo libapopkernel_la-apop_conversions.lo libapopkernel_la-apop_data.lo libapopkernel_la-apop_db.lo libapopkernel_la-apop_fexact.lo libapopkernel_la-apop_hist.lo libapopkernel_la-apop_linear_algebra.lo libapopkernel_la-apop_linear_constraint.lo libapopkernel_la-apop_mapply.lo libapopkernel_la-apop_mcmc.lo libapopkernel_la-apop_missing_data.lo libapopkernel_la-apop_mle.lo libapopkernel_la-apop_model.lo libapopkernel_la-apop_name.lo libapopkernel_la-apop_output.lo libapopkernel_la-apop_rake.lo libapopkernel_la-apop_regression.lo libapopkernel_la-apop_settings.lo libapopkernel_la-apop_sort.lo libapopkernel_la-apop_stats.lo libapopkernel_la-apop_tests.lo libapopkernel_la-apop_update.lo libapopkernel_la-apop_vtables.lo libtool: link: ar cr .libs/libapopkernel.a .libs/libapopkernel_la-apop_arms.o .libs/libapopkernel_la-apop_asst.o .libs/libapopkernel_la-apop_bootstrap.o .libs/libapopkernel_la-apop_conversions.o .libs/libapopkernel_la-apop_data.o .libs/libapopkernel_la-apop_db.o .libs/libapopkernel_la-apop_fexact.o .libs/libapopkernel_la-apop_hist.o .libs/libapopkernel_la-apop_linear_algebra.o .libs/libapopkernel_la-apop_linear_constraint.o .libs/libapopkernel_la-apop_mapply.o .libs/libapopkernel_la-apop_mcmc.o .libs/libapopkernel_la-apop_missing_data.o .libs/libapopkernel_la-apop_mle.o .libs/libapopkernel_la-apop_model.o .libs/libapopkernel_la-apop_name.o .libs/libapopkernel_la-apop_output.o .libs/libapopkernel_la-apop_rake.o .libs/libapopkernel_la-apop_regression.o .libs/libapopkernel_la-apop_settings.o .libs/libapopkernel_la-apop_sort.o .libs/libapopkernel_la-apop_stats.o .libs/libapopkernel_la-apop_tests.o .libs/libapopkernel_la-apop_update.o .libs/libapopkernel_la-apop_vtables.o libtool: link: ranlib .libs/libapopkernel.a libtool: link: ( cd ".libs" && rm -f "libapopkernel.la" && ln -s "../libapopkernel.la" "libapopkernel.la" ) /bin/bash ./libtool --tag=CC --mode=link gcc -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -version-info 2:0:0 -Wl,--version-script=../apophenia.map -Wl,-z,relro -Wl,-z,now -o libapophenia.la -rpath /usr/lib/x86_64-linux-gnu asprintf.lo libapopkernel.la transform/libapoptransform.la model/libapopmodel.la -L/usr/lib/x86_64-linux-gnu/ -lmariadb -L/usr/lib -lsqlite3 -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -lm libtool: link: gcc -shared -fPIC -DPIC .libs/asprintf.o -Wl,--whole-archive ./.libs/libapopkernel.a transform/.libs/libapoptransform.a model/.libs/libapopmodel.a -Wl,--no-whole-archive -L/usr/lib/x86_64-linux-gnu/ -lmariadb -L/usr/lib /usr/lib/x86_64-linux-gnu/libsqlite3.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -g -O3 -fstack-protector-strong -fopenmp -Wl,--version-script=../apophenia.map -Wl,-z -Wl,relro -Wl,-z -Wl,now -fopenmp -pthread -Wl,-soname -Wl,libapophenia.so.2 -o .libs/libapophenia.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libapophenia.so.2" && ln -s "libapophenia.so.2.0.0" "libapophenia.so.2") libtool: link: (cd ".libs" && rm -f "libapophenia.so" && ln -s "libapophenia.so.2.0.0" "libapophenia.so") libtool: link: (cd .libs/libapophenia.lax/libapopkernel.a && ar x "/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/./.libs/libapopkernel.a") libtool: link: (cd .libs/libapophenia.lax/libapoptransform.a && ar x "/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/transform/.libs/libapoptransform.a") libtool: link: (cd .libs/libapophenia.lax/libapopmodel.a && ar x "/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/model/.libs/libapopmodel.a") libtool: link: ar cr .libs/libapophenia.a asprintf.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_arms.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_asst.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_bootstrap.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_conversions.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_data.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_db.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_fexact.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_hist.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_linear_algebra.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_linear_constraint.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_mapply.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_mcmc.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_missing_data.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_mle.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_model.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_name.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_output.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_rake.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_regression.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_settings.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_sort.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_stats.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_tests.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_update.o .libs/libapophenia.lax/libapopkernel.a/libapopkernel_la-apop_vtables.o .libs/libapophenia.lax/libapoptransform.a/libapoptransform_la-apop_coordinate_transform.o .libs/libapophenia.lax/libapoptransform.a/libapoptransform_la-apop_cross.o .libs/libapophenia.lax/libapoptransform.a/libapoptransform_la-apop_dconstrain.o .libs/libapophenia.lax/libapoptransform.a/libapoptransform_la-apop_fix_params.o .libs/libapophenia.lax/libapoptransform.a/libapoptransform_la-apop_mixture.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_bernoulli.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_beta.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_dirichlet.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_exponential.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_gamma.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_kerneld.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_loess.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_multinomial.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_multivariate_normal.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_normal.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_ols.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_pmf.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_poisson.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_probit.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_t.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_uniform.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_wishart.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_yule.o .libs/libapophenia.lax/libapopmodel.a/libapopmodel_la-apop_zipf.o libtool: link: ranlib .libs/libapophenia.a libtool: link: rm -fr .libs/libapophenia.lax libtool: link: ( cd ".libs" && rm -f "libapophenia.la" && ln -s "../libapophenia.la" "libapophenia.la" ) make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' Making all in cmd make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/cmd' gcc -DHAVE_CONFIG_H -I. -I../../cmd -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_text_to_db.o ../../cmd/apop_text_to_db.c gcc -DHAVE_CONFIG_H -I. -I../../cmd -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_db_to_crosstab.o ../../cmd/apop_db_to_crosstab.c gcc -DHAVE_CONFIG_H -I. -I../../cmd -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_plot_query.o ../../cmd/apop_plot_query.c /bin/bash ../libtool --tag=CC --mode=link gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o apop_db_to_crosstab apop_db_to_crosstab.o ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm /bin/bash ../libtool --tag=CC --mode=link gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o apop_text_to_db apop_text_to_db.o ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm /bin/bash ../libtool --tag=CC --mode=link gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o apop_plot_query apop_plot_query.o ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm libtool: link: gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/apop_text_to_db apop_text_to_db.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/apop_db_to_crosstab apop_db_to_crosstab.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -I ../.. -I/usr/include -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/apop_plot_query apop_plot_query.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="1.0" --source="Apophenia (Debian )" --libtool --no-info \ -I ../../debian/man/apop_text_to_db.h2m \ -n "command line utility to convert a text file into a database table" \ -o apop_text_to_db.1 \ ../cmd/apop_text_to_db /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="1.0" --source="Apophenia (Debian )" --libtool --no-info \ -I ../../debian/man/apop_db_to_crosstab.h2m \ -n "command line utility to convert a three-column table to a crosstab" \ -o apop_db_to_crosstab.1 \ ../cmd/apop_db_to_crosstab /usr/bin/help2man \ -s 1 \ --manual="Apophenia" --version-string="1.0" --source="Apophenia (Debian )" --libtool --no-info \ -I ../../debian/man/apop_plot_query.h2m \ -n "command line utility to take in a query and put out a Gnuplot table file" \ -o apop_plot_query.1 \ ../cmd/apop_plot_query make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/cmd' Making all in eg make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/eg' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/eg' Making all in tests make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' Making all in docs make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/docs' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/docs' make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' make[1]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' dh_auto_test -a -O--builddirectory=_build cd _build && make -j4 check VERBOSE=1 make[1]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' Making check in transform make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/transform' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/transform' Making check in model make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/model' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/model' Making check in . make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' Making check in cmd make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/cmd' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/cmd' Making check in eg make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/eg' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/eg' Making check in tests make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' make db_tests error_test factors nist_tests sort_example test_apop ../eg/apop_map_row ../eg/binning ../eg/boot_clt ../eg/data_fill ../eg/draw_to_db ../eg/db_fns ../eg/dot_products ../eg/entropy_vector ../eg/iv ../eg/ks_tests ../eg/logit ../eg/fake_logit ../eg/normalization_demo ../eg/ols ../eg/ols_oneliner ../eg/parameterization ../eg/simple_subsets ../eg/t_test_by_rows ../eg/test_distances ../eg/test_fisher ../eg/test_harmonic ../eg/test_pruning ../eg/test_regex make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o db_tests.o ../../tests/db_tests.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o error_test.o ../../tests/error_test.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o factors.o ../../tests/factors.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o nist_tests.o ../../tests/nist_tests.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o sort_example.o ../../tests/sort_example.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_apop.o ../../tests/test_apop.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o apop_map_row.o `test -f '../eg/apop_map_row.c' || echo '../../tests/'`../eg/apop_map_row.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o binning.o `test -f '../eg/binning.c' || echo '../../tests/'`../eg/binning.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o boot_clt.o `test -f '../eg/boot_clt.c' || echo '../../tests/'`../eg/boot_clt.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o data_fill.o `test -f '../eg/data_fill.c' || echo '../../tests/'`../eg/data_fill.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o draw_to_db.o `test -f '../eg/draw_to_db.c' || echo '../../tests/'`../eg/draw_to_db.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o db_fns.o `test -f '../eg/db_fns.c' || echo '../../tests/'`../eg/db_fns.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o dot_products.o `test -f '../eg/dot_products.c' || echo '../../tests/'`../eg/dot_products.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o entropy_vector.o `test -f '../eg/entropy_vector.c' || echo '../../tests/'`../eg/entropy_vector.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o iv.o `test -f '../eg/iv.c' || echo '../../tests/'`../eg/iv.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ks_tests.o `test -f '../eg/ks_tests.c' || echo '../../tests/'`../eg/ks_tests.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o logit.o `test -f '../eg/logit.c' || echo '../../tests/'`../eg/logit.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fake_logit.o `test -f '../eg/fake_logit.c' || echo '../../tests/'`../eg/fake_logit.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o normalization_demo.o `test -f '../eg/normalization_demo.c' || echo '../../tests/'`../eg/normalization_demo.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ols.o `test -f '../eg/ols.c' || echo '../../tests/'`../eg/ols.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ols_oneliner.o `test -f '../eg/ols_oneliner.c' || echo '../../tests/'`../eg/ols_oneliner.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o parameterization.o `test -f '../eg/parameterization.c' || echo '../../tests/'`../eg/parameterization.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o simple_subsets.o `test -f '../eg/simple_subsets.c' || echo '../../tests/'`../eg/simple_subsets.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o t_test_by_rows.o `test -f '../eg/t_test_by_rows.c' || echo '../../tests/'`../eg/t_test_by_rows.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_distances.o `test -f '../eg/test_distances.c' || echo '../../tests/'`../eg/test_distances.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_fisher.o `test -f '../eg/test_fisher.c' || echo '../../tests/'`../eg/test_fisher.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_harmonic.o `test -f '../eg/test_harmonic.c' || echo '../../tests/'`../eg/test_harmonic.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_pruning.o `test -f '../eg/test_pruning.c' || echo '../../tests/'`../eg/test_pruning.c gcc -DHAVE_CONFIG_H -I. -I../../tests -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_regex.o `test -f '../eg/test_regex.c' || echo '../../tests/'`../eg/test_regex.c /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o db_tests db_tests.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o error_test error_test.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o factors factors.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/db_tests db_tests.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/error_test error_test.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o nist_tests nist_tests.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/factors factors.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o sort_example sort_example.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/apop_map_row apop_map_row.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/nist_tests nist_tests.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/sort_example sort_example.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/binning binning.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/apop_map_row apop_map_row.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/boot_clt boot_clt.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/data_fill data_fill.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/binning binning.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/draw_to_db draw_to_db.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/boot_clt boot_clt.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/data_fill data_fill.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/db_fns db_fns.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/draw_to_db draw_to_db.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/dot_products dot_products.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/entropy_vector entropy_vector.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/db_fns db_fns.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/iv iv.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/dot_products dot_products.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/entropy_vector entropy_vector.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/ks_tests ks_tests.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/logit logit.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/fake_logit fake_logit.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/iv iv.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/ks_tests ks_tests.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/logit logit.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/fake_logit fake_logit.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/normalization_demo normalization_demo.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/ols ols.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/ols_oneliner ols_oneliner.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/parameterization parameterization.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/normalization_demo normalization_demo.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/ols_oneliner ols_oneliner.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/parameterization parameterization.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/ols ols.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/simple_subsets simple_subsets.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/t_test_by_rows t_test_by_rows.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/test_distances test_distances.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/test_fisher test_fisher.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_fisher test_fisher.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_distances test_distances.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/simple_subsets simple_subsets.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/t_test_by_rows t_test_by_rows.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/test_harmonic test_harmonic.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/test_pruning test_pruning.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o ../eg/test_regex test_regex.o /bin/bash ../libtool --tag=CC --mode=link gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp ../libapophenia.la -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -Wl,-z,relro -Wl,-z,now -o test_apop test_apop.o libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_pruning test_pruning.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_harmonic test_harmonic.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o ../eg/.libs/test_regex test_regex.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp libtool: link: gcc -DTesting -DDatadir=\"../../tests/\" -I../../tests -I../.. -I/usr/include -Wno-unused-result -g -O3 -fdebug-prefix-map=/build/apophenia-Y5h7wr/apophenia-1.0+ds=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/test_apop test_apop.o ../.libs/libapophenia.so -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -pthread -fopenmp make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' make check-TESTS make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' make[4]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' PASS: factors PASS: error_test PASS: db_tests PASS: nist_tests PASS: sort_example PASS: ../eg/binning PASS: ../eg/apop_map_row PASS: ../eg/data_fill PASS: utilities_test PASS: ../eg/draw_to_db PASS: ../eg/dot_products PASS: ../eg/entropy_vector PASS: ../eg/iv PASS: ../eg/ks_tests PASS: ../eg/db_fns PASS: ../eg/fake_logit PASS: ../eg/normalization_demo PASS: ../eg/ols PASS: ../eg/ols_oneliner PASS: ../eg/parameterization PASS: ../eg/simple_subsets PASS: ../eg/t_test_by_rows PASS: ../eg/test_distances PASS: ../eg/test_fisher PASS: ../eg/test_harmonic PASS: ../eg/test_pruning PASS: ../eg/test_regex PASS: ../eg/boot_clt PASS: ../eg/logit PASS: test_apop ============================================================================ Testsuite summary for apophenia 1.0 ============================================================================ # TOTAL: 30 # PASS: 30 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[4]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' Making check in docs make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/docs' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/docs' make[1]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --builddirectory=_build dh_testroot -a -O--builddirectory=_build dh_prep -a -O--builddirectory=_build dh_auto_install -a -O--builddirectory=_build cd _build && make -j1 install DESTDIR=/build/apophenia-Y5h7wr/apophenia-1.0\+ds/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' Making install in transform make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/transform' make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/transform' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/transform' make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/transform' Making install in model make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/model' make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/model' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/model' make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/model' Making install in . make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' /bin/mkdir -p '/build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ./libtool --mode=install /usr/bin/install -c libapophenia.la '/build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libapophenia.so.2.0.0 /build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/lib/x86_64-linux-gnu/libapophenia.so.2.0.0 libtool: install: (cd /build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libapophenia.so.2.0.0 libapophenia.so.2 || { rm -f libapophenia.so.2 && ln -s libapophenia.so.2.0.0 libapophenia.so.2; }; }) libtool: install: (cd /build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libapophenia.so.2.0.0 libapophenia.so || { rm -f libapophenia.so && ln -s libapophenia.so.2.0.0 libapophenia.so; }; }) libtool: install: /usr/bin/install -c .libs/libapophenia.lai /build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/lib/x86_64-linux-gnu/libapophenia.la libtool: install: /usr/bin/install -c .libs/libapophenia.a /build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/lib/x86_64-linux-gnu/libapophenia.a libtool: install: chmod 644 /build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/lib/x86_64-linux-gnu/libapophenia.a libtool: install: ranlib /build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/lib/x86_64-linux-gnu/libapophenia.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' /bin/mkdir -p '/build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/include' /usr/bin/install -c -m 644 apop.h '/build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/include' /bin/mkdir -p '/build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 apophenia.pc '/build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' Making install in cmd make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/cmd' make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/cmd' /bin/mkdir -p '/build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c apop_text_to_db apop_db_to_crosstab apop_plot_query '/build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/bin' libtool: warning: '../libapophenia.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/apop_text_to_db /build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/bin/apop_text_to_db libtool: warning: '../libapophenia.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/apop_db_to_crosstab /build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/bin/apop_db_to_crosstab libtool: warning: '../libapophenia.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/apop_plot_query /build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/bin/apop_plot_query /bin/mkdir -p '/build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 apop_text_to_db.1 apop_db_to_crosstab.1 apop_plot_query.1 '/build/apophenia-Y5h7wr/apophenia-1.0+ds/debian/tmp/usr/share/man/man1' make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/cmd' make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/cmd' Making install in eg make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/eg' make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/eg' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/eg' make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/eg' Making install in tests make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/tests' Making install in docs make[2]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/docs' make[3]: Entering directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/docs' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/docs' make[2]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build/docs' make[1]: Leaving directory '/build/apophenia-Y5h7wr/apophenia-1.0+ds/_build' dh_install -a -O--builddirectory=_build dh_installdocs -a -O--builddirectory=_build dh_installchangelogs -a -O--builddirectory=_build dh_installexamples -a -O--builddirectory=_build dh_installman -a -O--builddirectory=_build dh_installinit -a -O--builddirectory=_build dh_installsystemduser -a -O--builddirectory=_build dh_perl -a -O--builddirectory=_build dh_link -a -O--builddirectory=_build dh_strip_nondeterminism -a -O--builddirectory=_build dh_compress -a -O--builddirectory=_build dh_fixperms -a -O--builddirectory=_build dh_missing -a -O--builddirectory=_build dh_missing: warning: usr/lib/x86_64-linux-gnu/libapophenia.la exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: apophenia-bin (3), apophenia-doc (0), libapophenia2 (2), libapophenia2-dev (4) * dh_installdocs: apophenia-bin (0), apophenia-doc (0), libapophenia2 (0), libapophenia2-dev (0) * dh_installexamples: apophenia-bin (0), apophenia-doc (49), libapophenia2 (0), libapophenia2-dev (0) * dh_installman: apophenia-bin (3), apophenia-doc (0), libapophenia2 (0), libapophenia2-dev (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed dh_dwz -a -O--builddirectory=_build dh_strip -a -O--builddirectory=_build dh_makeshlibs -a -O--builddirectory=_build dh_shlibdeps -a -O--builddirectory=_build dh_installdeb -a -O--builddirectory=_build dh_gencontrol -a -O--builddirectory=_build dh_md5sums -a -O--builddirectory=_build dh_builddeb -a -O--builddirectory=_build dpkg-deb: building package 'libapophenia2' in '../libapophenia2_1.0+ds-8+b1_amd64.deb'. dpkg-deb: building package 'libapophenia2-dev' in '../libapophenia2-dev_1.0+ds-8+b1_amd64.deb'. dpkg-deb: building package 'apophenia-bin-dbgsym' in '../apophenia-bin-dbgsym_1.0+ds-8+b1_amd64.deb'. dpkg-deb: building package 'libapophenia2-dbgsym' in '../libapophenia2-dbgsym_1.0+ds-8+b1_amd64.deb'. dpkg-deb: building package 'apophenia-bin' in '../apophenia-bin_1.0+ds-8+b1_amd64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../apophenia_1.0+ds-8+b1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/apophenia-Y5h7wr /tmp/apophenia-1.0+ds-8+b1_bpyaf_7 I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.3nzRwZlmCg... I: success in 3234.4797 seconds md5: apophenia-bin-dbgsym_1.0+ds-8+b1_amd64.deb: OK md5: apophenia-bin_1.0+ds-8+b1_amd64.deb: OK md5: libapophenia2-dbgsym_1.0+ds-8+b1_amd64.deb: OK md5: libapophenia2-dev_1.0+ds-8+b1_amd64.deb: OK md5: libapophenia2_1.0+ds-8+b1_amd64.deb: OK sha1: apophenia-bin-dbgsym_1.0+ds-8+b1_amd64.deb: OK sha1: apophenia-bin_1.0+ds-8+b1_amd64.deb: OK sha1: libapophenia2-dbgsym_1.0+ds-8+b1_amd64.deb: OK sha1: libapophenia2-dev_1.0+ds-8+b1_amd64.deb: OK sha1: libapophenia2_1.0+ds-8+b1_amd64.deb: OK sha256: apophenia-bin-dbgsym_1.0+ds-8+b1_amd64.deb: OK sha256: apophenia-bin_1.0+ds-8+b1_amd64.deb: OK sha256: libapophenia2-dbgsym_1.0+ds-8+b1_amd64.deb: OK sha256: libapophenia2-dev_1.0+ds-8+b1_amd64.deb: OK sha256: libapophenia2_1.0+ds-8+b1_amd64.deb: OK Checksums: OK