Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/a/ants/ants_2.1.0-5+b1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/ants-2.1.0-5+b1pnwgq52b/ants_2.1.0-5_amd64.buildinfo Get source package info: ants=2.1.0-5 Source URL: http://snapshot.notset.fr/mr/package/ants/2.1.0-5/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11 automake=1:1.15.1-2.1 autopoint=0.19.8.1-4 autotools-dev=20161112.1 base-files=10 base-passwd=3.5.43 bash=4.4-5 binutils=2.29-9 binutils-common=2.29-9 binutils-x86-64-linux-gnu=2.29-9 bsdmainutils=9.0.12+nmu1 bsdutils=1:2.29.2-4 build-essential=12.3 bzip2=1.0.6-8.1 cmake=3.9.1-1 cmake-data=3.9.1-1 coreutils=8.26-3 cpp=4:7.1.0-2 cpp-7=7.2.0-4 dash=0.5.8-2.5 debconf=1.5.63 debhelper=10.8 debianutils=4.8.2 dh-autoreconf=14 dh-strip-nondeterminism=0.038-1 diffutils=1:3.6-1 dpkg=1.18.24 dpkg-dev=1.18.24 e2fslibs=1.43.6-1 e2fsprogs=1.43.6-1 fdisk=2.29.2-4 file=1:5.32-1 findutils=4.6.0+git+20170729-2 g++=4:7.1.0-2 g++-7=7.2.0-4 gcc=4:7.1.0-2 gcc-7=7.2.0-4 gcc-7-base=7.2.0-4 gettext=0.19.8.1-4 gettext-base=0.19.8.1-4 grep=3.1-2 groff-base=1.22.3-9 gzip=1.6-5+b1 hdf5-helpers=1.10.0-patch1+docs-4 help2man=1.47.4 hostname=3.18+b1 icu-devtools=57.1-6 init-system-helpers=1.49 intltool-debian=0.35.0+20060710.4 libacl1=2.2.52-3+b1 libaec-dev=0.3.2-2 libaec0=0.3.2-2 libarchive-zip-perl=1.59-1 libarchive13=3.2.2-2 libasan4=7.2.0-4 libatomic1=7.2.0-4 libattr1=1:2.4.47-2+b2 libaudit-common=1:2.7.7-1 libaudit1=1:2.7.7-1+b2 libbinutils=2.29-9 libblkid1=2.29.2-4 libboost-dev=1.62.0.1 libboost1.62-dev=1.62.0+dfsg-4+b1 libbsd0=0.8.6-2 libbz2-1.0=1.0.6-8.1 libc-bin=2.24-17 libc-dev-bin=2.24-17 libc6=2.24-17 libc6-dev=2.24-17 libcap-ng0=0.7.7-3+b1 libcc1-0=7.2.0-4 libcharls-dev=1.1.0+dfsg-2 libcharls1=1.1.0+dfsg-2 libcilkrts5=7.2.0-4 libcomerr2=1.43.6-1 libcroco3=0.6.12-1 libcurl3=7.55.1-1 libdb5.3=5.3.28-13.1 libdcmtk-dev=3.6.2-3 libdcmtk12=3.6.2-3 libdebconfclient0=0.229 libdouble-conversion-dev=2.0.1-4 libdouble-conversion1=2.0.1-4 libdpkg-perl=1.18.24 libexpat1=2.2.3-1 libexpat1-dev=2.2.3-1 libfdisk1=2.29.2-4 libffi6=3.2.1-6 libfftw3-bin=3.3.6p2-2 libfftw3-dev=3.3.6p2-2 libfftw3-double3=3.3.6p2-2 libfftw3-long3=3.3.6p2-2 libfftw3-quad3=3.3.6p2-2 libfftw3-single3=3.3.6p2-2 libfile-stripnondeterminism-perl=0.038-1 libgcc-7-dev=7.2.0-4 libgcc1=1:7.2.0-4 libgcrypt20=1.7.9-1 libgdbm3=1.8.3-14 libgdcm2-dev=2.8.2-3+b1 libgdcm2.8=2.8.2-3+b1 libgfortran4=7.2.0-4 libglib2.0-0=2.53.7-1 libgmp10=2:6.1.2+dfsg-1 libgnutls30=3.5.15-2 libgomp1=7.2.0-4 libgpg-error0=1.27-3 libgssapi-krb5-2=1.15.1-2 libhdf5-100=1.10.0-patch1+docs-4 libhdf5-cpp-100=1.10.0-patch1+docs-4 libhdf5-dev=1.10.0-patch1+docs-4 libhogweed4=3.3-1+b1 libicu-dev=57.1-6 libicu57=57.1-6 libidn2-0=2.0.2-3 libinsighttoolkit4-dev=4.12.1-dfsg1-1 libinsighttoolkit4.12=4.12.1-dfsg1-1 libisl15=0.18-1 libitm1=7.2.0-4 libjbig-dev=2.1-3.1+b2 libjbig0=2.1-3.1+b2 libjpeg-dev=1:1.5.2-2 libjpeg62-turbo=1:1.5.2-2 libjpeg62-turbo-dev=1:1.5.2-2 libjson-c3=0.12.1-1.1 libjsoncpp1=1.7.4-3 libk5crypto3=1.15.1-2 libkeyutils1=1.5.9-9 libkrb5-3=1.15.1-2 libkrb5support0=1.15.1-2 libldap-2.4-2=2.4.45+dfsg-1 libldap-common=2.4.45+dfsg-1 liblocale-gettext-perl=1.07-3+b3 liblsan0=7.2.0-4 liblz4-1=0.0~r131-2+b1 liblzma-dev=5.2.2-1.3 liblzma5=5.2.2-1.3 liblzo2-2=2.08-1.2+b2 libmagic-mgc=1:5.32-1 libmagic1=1:5.32-1 libmount1=2.29.2-4 libmpc3=1.0.3-1+b2 libmpfr4=3.1.6-1 libmpx2=7.2.0-4 libncurses5=6.0+20170902-1 libncursesw5=6.0+20170902-1 libnettle6=3.3-1+b1 libnghttp2-14=1.25.0-1 libnifti-dev=2.0.0-2+b2 libnifti2=2.0.0-2+b2 libopenjp2-7=2.1.2-1.3 libp11-kit0=0.23.7-3 libpam-modules=1.1.8-3.6 libpam-modules-bin=1.1.8-3.6 libpam-runtime=1.1.8-3.6 libpam0g=1.1.8-3.6 libpcre3=2:8.39-4 libperl5.26=5.26.0-7 libpipeline1=1.4.2-1 libpng-dev=1.6.32-1 libpng16-16=1.6.32-1 libprocps6=2:3.3.12-3 libpsl5=0.18.0-4 libquadmath0=7.2.0-4 librhash0=1.3.4-3 librtmp1=2.4+20151223.gitfa8646d.1-1+b1 libsasl2-2=2.1.27~101-g0780600+dfsg-3 libsasl2-modules-db=2.1.27~101-g0780600+dfsg-3 libselinux1=2.7-1 libsigsegv2=2.11-1 libsmartcols1=2.29.2-4 libsocket++1=1.12.13-8+b1 libss2=1.43.6-1 libssh2-1=1.8.0-1 libssl-dev=1.1.0f-5 libssl1.0.2=1.0.2l-2 libssl1.1=1.1.0f-5 libstdc++-7-dev=7.2.0-4 libstdc++6=7.2.0-4 libsystemd0=234-3 libsz2=0.3.2-2 libtasn1-6=4.12-2.1 libtiff5=4.0.8-5 libtiff5-dev=4.0.8-5 libtiffxx5=4.0.8-5 libtimedate-perl=2.3000-2 libtinfo5=6.0+20170902-1 libtool=2.4.6-2 libtsan0=7.2.0-4 libubsan0=7.2.0-4 libudev1=234-3 libunistring2=0.9.7-2 libuuid1=2.29.2-4 libuv1=1.9.1-3 libwrap0=7.6.q-26 libwrap0-dev=7.6.q-26 libxml2=2.9.4+dfsg1-4 libxml2-dev=2.9.4+dfsg1-4 linux-libc-dev=4.12.6-1 login=1:4.4-4.1 lsb-base=9.20170808 m4=1.4.18-1 make=4.1-9.1 man-db=2.7.6.1-2 mawk=1.3.3-17+b3 ncurses-base=6.0+20170902-1 ncurses-bin=6.0+20170902-1 patch=2.7.5-1+b2 perl=5.26.0-7 perl-base=5.26.0-7 perl-modules-5.26=5.26.0-7 po-debconf=1.0.20 procps=2:3.3.12-3 sed=4.4-1 sysvinit-utils=2.88dsf-59.9 tar=1.29b-2 util-linux=2.29.2-4 uuid-dev=2.29.2-4 xz-utils=5.2.2-1.3 zlib1g=1:1.2.8.dfsg-5 zlib1g-dev=1:1.2.8.dfsg-5 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20170618T072316Z/ buster main deb-src http://snapshot.notset.fr/archive/debian/20170618T072316Z/ buster main deb http://snapshot.notset.fr/archive/debian/20170911T174434Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d ants=2.1.0-5 && mkdir -p /build/ants-8vuM8K && dpkg-source --no-check -x /*.dsc /build/ants-8vuM8K/ants-2.1.0 && cd /build/ants-8vuM8K/ants-2.1.0 && { printf '%s' 'ants (2.1.0-5+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against libinsighttoolkit4.12. -- amd64 / i386 Build Daemon (x86-grnet-01) Mon, 11 Sep 2017 08:59:48 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/ants-8vuM8K" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/ants-8vuM8K/ants-2.1.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1505120388" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/ants-8vuM8K /tmp/ants-2.1.0-5+b1pnwgq52b buster /dev/null deb http://snapshot.notset.fr/archive/debian/20170911T174434Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.izO54HrHXh as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.izO54HrHXh Reading package lists... Building dependency tree... util-linux is already the newest version (2.29.2-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 131 kB of archives. After this operation, 373 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20170911T174434Z unstable/main amd64 libfakeroot amd64 1.22-1 [45.7 kB] Get:2 http://snapshot.notset.fr/archive/debian/20170911T174434Z unstable/main amd64 fakeroot amd64 1.22-1 [85.7 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 131 kB in 0s (426 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4405 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.22-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.22-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.22-1_amd64.deb ... Unpacking fakeroot (1.22-1) ... Processing triggers for libc-bin (2.24-17) ... Setting up libfakeroot:amd64 (1.22-1) ... Setting up fakeroot (1.22-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.24-17) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20170618T072316Z/ buster main deb-src http://snapshot.notset.fr/archive/debian/20170618T072316Z/ buster main deb http://snapshot.notset.fr/archive/debian/20170911T174434Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.izO54HrHXh Get:1 http://snapshot.notset.fr/archive/debian/20170618T072316Z buster InRelease [84.4 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20170911T174434Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20170618T072316Z buster/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20170618T072316Z buster/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20170618T072316Z buster/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20170618T072316Z buster/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20170618T072316Z buster/main Sources [8849 kB] Get:4 http://snapshot.notset.fr/archive/debian/20170618T072316Z buster/main amd64 Packages [9147 kB] Fetched 18.1 MB in 16s (1125 kB/s) Reading package lists... W: Problem unlinking the file auxfiles - pkgAcquire::Clean (21: Is a directory) I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.izO54HrHXh I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d ants=2.1.0-5 && mkdir -p /build/ants-8vuM8K && dpkg-source --no-check -x /*.dsc /build/ants-8vuM8K/ants-2.1.0 && cd /build/ants-8vuM8K/ants-2.1.0 && { printf '%s' 'ants (2.1.0-5+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against libinsighttoolkit4.12. -- amd64 / i386 Build Daemon (x86-grnet-01) Mon, 11 Sep 2017 08:59:48 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/ants-8vuM8K"' exec /tmp/mmdebstrap.izO54HrHXh Reading package lists... NOTICE: 'ants' packaging is maintained in the 'Git' version control system at: https://anonscm.debian.org/git/pkg-exppsy/ants.git Please use: git clone https://anonscm.debian.org/git/pkg-exppsy/ants.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2385 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20170618T072316Z buster/main ants 2.1.0-5 (dsc) [2063 B] Get:2 http://snapshot.notset.fr/archive/debian/20170618T072316Z buster/main ants 2.1.0-5 (tar) [2266 kB] Get:3 http://snapshot.notset.fr/archive/debian/20170618T072316Z buster/main ants 2.1.0-5 (diff) [116 kB] Fetched 2385 kB in 2s (1177 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'ants_2.1.0-5.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting ants in /build/ants-8vuM8K/ants-2.1.0 dpkg-source: info: unpacking ants_2.1.0.orig.tar.gz dpkg-source: info: unpacking ants_2.1.0-5.debian.tar.xz dpkg-source: info: applying up_lower_cc_3_test_i386_precision dpkg-source: info: applying deb_local-data.patch dpkg-source: info: applying 5608ed64ee9993882e99781172568238933170d6.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/ants-8vuM8K/ants-2.1.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1505120388" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.izO54HrHXh dpkg-buildpackage: info: source package ants dpkg-buildpackage: info: source version 2.1.0-5+b1 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by amd64 / i386 Build Daemon (x86-grnet-01) dpkg-source --before-build ants-2.1.0 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/build/ants-8vuM8K/ants-2.1.0' dh_auto_clean rm -rf debian/ants.environment-modules make[1]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0' dh_clean -O--parallel rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f debian/ants.debhelper.log rm -f -- debian/ants.substvars debian/files rm -fr -- debian/ants/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch --parallel dh_update_autotools_config -a -O--parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/build/ants-8vuM8K/ants-2.1.0' dh_auto_configure -- \ -DANTS_SUPERBUILD:BOOL=OFF \ -DANTS_USE_GIT_PROTOC:BOOL=OFF \ -DCOPY_SCRIPT_FILES_TO_BIN_DIR:BOOL=OFF \ -DCMAKE_SKIP_RPATH:BOOL=OFF \ -DUSE_SYSTEM_ITK:BOOL=ON \ -DUSE_VTK:BOOL=OFF \ -DBUILD_SHARED_LIBS:BOOL=ON \ -DRUN_SHORT_TESTS:BOOL=ON \ -DRUN_LONG_TESTS:BOOL=OFF \ -DEXECUTABLE_OUTPUT_PATH:PATH= \ -DCMAKE_INSTALL_RPATH:STRING="/usr/lib/ants/lib" \ --debug-output install -d obj-x86_64-linux-gnu cd obj-x86_64-linux-gnu cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DANTS_SUPERBUILD:BOOL=OFF -DANTS_USE_GIT_PROTOC:BOOL=OFF -DCOPY_SCRIPT_FILES_TO_BIN_DIR:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=OFF -DUSE_SYSTEM_ITK:BOOL=ON -DUSE_VTK:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=ON -DRUN_SHORT_TESTS:BOOL=ON -DRUN_LONG_TESTS:BOOL=OFF -DEXECUTABLE_OUTPUT_PATH:PATH= -DCMAKE_INSTALL_RPATH:STRING=/usr/lib/ants/lib --debug-output Running with debug output on. -- The C compiler identification is GNU 7.2.0 Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerId.cmake [2] /usr/share/cmake-3.9/Modules/CMakeDetermineCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The CXX compiler identification is GNU 7.2.0 Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerId.cmake [2] /usr/share/cmake-3.9/Modules/CMakeDetermineCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Check for working C compiler: /usr/bin/cc Called from: [3] /usr/share/cmake-3.9/Modules/CMakeTestCompilerCommon.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake:37 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake:37 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Check for working C compiler: /usr/bin/cc -- works Called from: [3] /usr/share/cmake-3.9/Modules/CMakeTestCompilerCommon.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Detecting C compiler ABI info Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake:26 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake:65 (CMAKE_DETERMINE_COMPILER_ABI) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake:26 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake:65 (CMAKE_DETERMINE_COMPILER_ABI) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Detecting C compiler ABI info - done Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Detecting C compile features Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:74 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:68 (_record_compiler_features_c) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:16 (cmake_record_c_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake:68 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:74 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:68 (_record_compiler_features_c) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:16 (cmake_record_c_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake:68 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:74 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:71 (_record_compiler_features_c) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:16 (cmake_record_c_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake:68 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:74 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:71 (_record_compiler_features_c) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:16 (cmake_record_c_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake:68 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:74 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:74 (_record_compiler_features_c) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:16 (cmake_record_c_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake:68 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:74 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:74 (_record_compiler_features_c) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:16 (cmake_record_c_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake:68 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Detecting C compile features - done Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Check for working CXX compiler: /usr/bin/c++ Called from: [3] /usr/share/cmake-3.9/Modules/CMakeTestCompilerCommon.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:30 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:30 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Check for working CXX compiler: /usr/bin/c++ -- works Called from: [3] /usr/share/cmake-3.9/Modules/CMakeTestCompilerCommon.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Detecting CXX compiler ABI info Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake:26 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:58 (CMAKE_DETERMINE_COMPILER_ABI) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake:26 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:58 (CMAKE_DETERMINE_COMPILER_ABI) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Detecting CXX compiler ABI info - done Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompilerABI.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Detecting CXX compile features Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:79 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:82 (_record_compiler_features_cxx) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:55 (cmake_record_cxx_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:61 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:79 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:82 (_record_compiler_features_cxx) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:55 (cmake_record_cxx_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:61 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:79 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:85 (_record_compiler_features_cxx) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:55 (cmake_record_cxx_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:61 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:79 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:85 (_record_compiler_features_cxx) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:55 (cmake_record_cxx_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:61 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:79 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:88 (_record_compiler_features_cxx) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:55 (cmake_record_cxx_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:61 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:79 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:88 (_record_compiler_features_cxx) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:55 (cmake_record_cxx_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:61 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:79 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:91 (_record_compiler_features_cxx) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:55 (cmake_record_cxx_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:61 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:33 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake:79 (_record_compiler_features) /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake:91 (_record_compiler_features_cxx) /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake:55 (cmake_record_cxx_compile_features) /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake:61 (CMAKE_DETERMINE_COMPILE_FEATURES) CMakeLists.txt:56 (project) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [5] /usr/share/cmake-3.9/Modules/Internal/FeatureTesting.cmake [4] /usr/share/cmake-3.9/Modules/Compiler/CMakeCommonCompilerMacros.cmake [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Detecting CXX compile features - done Called from: [3] /usr/share/cmake-3.9/Modules/CMakeDetermineCompileFeatures.cmake [2] /usr/share/cmake-3.9/Modules/CMakeTestCXXCompiler.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wno-uninitialized Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wno-uninitialized - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wno-unused-parameter Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wno-unused-parameter - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wall Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wall - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wcast-align Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wcast-align - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wdisabled-optimization Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wdisabled-optimization - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wextra Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wextra - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wformat=2 Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wformat=2 - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Winvalid-pch Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Winvalid-pch - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wno-format-nonliteral Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wno-format-nonliteral - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wpointer-arith Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wpointer-arith - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wshadow Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wshadow - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wunused Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wunused - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wwrite-strings Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wwrite-strings - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-funit-at-a-time Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-funit-at-a-time - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wno-strict-overflow Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake:63 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCCompilerFlag.cmake:28 (CHECK_C_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:29 (ITK_CHECK_C_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:125 (check_c_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test C_HAS_WARNING-Wno-strict-overflow - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wall Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wall - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wcast-align Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wcast-align - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wdisabled-optimization Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wdisabled-optimization - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wextra Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wextra - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wformat=2 Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wformat=2 - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Winvalid-pch Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Winvalid-pch - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wno-format-nonliteral Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wno-format-nonliteral - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wpointer-arith Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wpointer-arith - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wshadow Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wshadow - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wunused Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wunused - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wwrite-strings Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wwrite-strings - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-funit-at-a-time Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-funit-at-a-time - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wno-strict-overflow Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wno-strict-overflow - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wno-deprecated Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wno-deprecated - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wno-invalid-offsetof Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wno-invalid-offsetof - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Woverloaded-virtual Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Woverloaded-virtual - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wstrict-null-sentinel Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITK_CheckCXXCompilerFlag.cmake:28 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:42 (ITK_CHECK_CXX_COMPILER_FLAG) CMake/ITKSetStandardCompilerFlags.cmake:126 (check_cxx_compiler_warning_flags) CMake/ITKSetStandardCompilerFlags.cmake:287 (check_compiler_warning_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_WARNING-Wstrict-null-sentinel - Success Called from: [8] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [7] /build/ants-8vuM8K/ants-2.1.0/CMake/ITK_CheckCXXCompilerFlag.cmake [6] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_DISABLE_OPTIMIZATION_FLAG Called from: [6] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0066 is not set: Honor per-config flags in try_compile() source-file signature. Run "cmake --help-policy CMP0066" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller config-specific compiler flags (e.g. CMAKE_C_FLAGS_DEBUG) in the test project. Call Stack (most recent call first): CMake/ITKSetStandardCompilerFlags.cmake:281 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:297 (check_compiler_platform_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake:64 (try_compile): Policy CMP0056 is not set: Honor link flags in try_compile() source-file signature. Run "cmake --help-policy CMP0056" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, try_compile is not honoring caller link flags (e.g. CMAKE_EXE_LINKER_FLAGS) in the test project. Call Stack (most recent call first): CMake/ITKSetStandardCompilerFlags.cmake:281 (CHECK_CXX_SOURCE_COMPILES) CMake/ITKSetStandardCompilerFlags.cmake:297 (check_compiler_platform_flags) Common.cmake:138 (include) ANTS.cmake:2 (include) CMakeLists.txt:57 (include) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [6] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Performing Test CXX_HAS_DISABLE_OPTIMIZATION_FLAG - Failed Called from: [6] /usr/share/cmake-3.9/Modules/CheckCXXSourceCompiles.cmake [5] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ITKSetStandardCompilerFlags.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Common.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning at CMake/ProjectSourceVersion.cmake:56 (message): git tag: "GIT-NOTFOUND" does not match expected version format! Call Stack (most recent call first): Version.cmake:17 (include) ANTS.cmake:16 (include) CMakeLists.txt:57 (include) Called from: [4] /build/ants-8vuM8K/ants-2.1.0/CMake/ProjectSourceVersion.cmake [3] /build/ants-8vuM8K/ants-2.1.0/Version.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Building ANTS version "2.1.0-gGIT-N" Called from: [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "vtkgdcm" references the file "/usr/lib/x86_64-linux-gnu/libvtkgdcm.so.2.8.2" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "vtkgdcmsharpglue" references the file "/usr/lib/x86_64-linux-gnu/libvtkgdcmsharpglue.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "vtkgdcmJava" references the file "/usr/lib/x86_64-linux-gnu/jni/libvtkgdcmJava.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "vtkgdcmPython" references the file "/usr/lib/python/dist-packages/libvtkgdcmPython.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "vtkgdcmPythonD" references the file "/usr/lib/x86_64-linux-gnu/libvtkgdcmPythonD.so.2.8.2" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmdump" references the file "/usr/bin/gdcmdump" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmdiff" references the file "/usr/bin/gdcmdiff" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmraw" references the file "/usr/bin/gdcmraw" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmscanner" references the file "/usr/bin/gdcmscanner" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmanon" references the file "/usr/bin/gdcmanon" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmgendir" references the file "/usr/bin/gdcmgendir" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmimg" references the file "/usr/bin/gdcmimg" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmconv" references the file "/usr/bin/gdcmconv" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmtar" references the file "/usr/bin/gdcmtar" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcminfo" references the file "/usr/bin/gdcminfo" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmscu" references the file "/usr/bin/gdcmscu" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmxml" references the file "/usr/bin/gdcmxml" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmpap3" references the file "/usr/bin/gdcmpap3" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- The imported target "gdcmpdf" references the file "/usr/bin/gdcmpdf" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. Called from: [9] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake [8] /usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMConfig.cmake [7] /usr/lib/cmake/ITK-4.12/Modules/ITKGDCM.cmake [6] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [5] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [4] /usr/lib/cmake/ITK-4.12/ITKModuleAPI.cmake [3] /usr/lib/cmake/ITK-4.12/ITKConfig.cmake [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt Entering /build/ants-8vuM8K/ants-2.1.0/Examples Called from: [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- ANTS Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ANTSJacobian Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- PrintHeader Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ResetDirection Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ANTSUseLandmarkImagesToGetAffineTransform Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ANTSUseLandmarkImagesToGetBSplineDisplacementField Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ANTSUseDeformationFieldToGetAffineTransform Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- antsAffineInitializer Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ImageMath Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- SurfaceCurvature Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- SurfaceBasedSmoothing Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- LaplacianThickness Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- SetOrigin Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- SetSpacing Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- SetDirectionByMatrix Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ConvertScalarImageToRGB Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- CreateWarpedGridImage Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- CreateJacobianDeterminantImage Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- MeasureImageSimilarity Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ConvertToJpg Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ConvertImagePixelType Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ConvertInputImagePixelTypeToFloat Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- FitBSplineCurveToPoints Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- AverageImages Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- AverageTensorImages Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ImageSetStatistics Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ThresholdImage Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- MultiplyImages Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- SmoothImage Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ClusterImageStatistics Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- LabelClustersUniquely Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- LabelOverlapMeasures Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- LesionFilling Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- MeasureMinMaxMean Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- WarpImageMultiTransform Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ComposeMultiTransform Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- StackSlices Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- MemoryTest Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- PermuteFlipImageOrientationAxes Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ImageCompare Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ResampleImageBySpacing Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- CopyImageHeaderInformation Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- WarpTimeSeriesImageMultiTransform Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ResampleImage Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ExtractSliceFromImage Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ExtractRegionFromImage Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ExtractRegionFromImageByMask Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- LabelGeometryMeasures Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- PasteImageIntoImage Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- TileImages Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- CreateTiledMosaic Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- CreateImage Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- WarpTensorImageMultiTransform Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ReorientTensorImage Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- RebaseTensorImage Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- N3BiasFieldCorrection Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- N4BiasFieldCorrection Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- KellySlater Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- KellyKapowski Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- CreateDTICohort Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- AverageAffineTransform Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- AverageAffineTransformNoRigid Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- antsAlignOrigin Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- antsRegistration Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- simpleSynRegistration Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- antsApplyTransforms Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- antsApplyTransformsToPoints Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- CompositeTransformUtil Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- antsMotionCorr Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- antsMotionCorrStats Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- antsMotionCorrDiffusionDirection Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- antsSliceRegularizedRegistration Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- sccan Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- CreateDisplacementField Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ANTSIntegrateVectorField Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ANTSIntegrateVelocityField Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- Atropos Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ConvertTransformFile Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- compareTwoTransforms Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- TimeSCCAN Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- TextureCooccurrenceFeatures Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- TextureRunLengthFeatures Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- ImageIntensityStatistics Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- GetConnectedComponentsFeatureImages Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- DeNrrd Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- antsTransformInfo Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- antsUtilitiesTesting Called from: [2] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt Entering /build/ants-8vuM8K/ants-2.1.0/Examples/TestSuite Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt Returning to /build/ants-8vuM8K/ants-2.1.0/Examples Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt Returning to /build/ants-8vuM8K/ants-2.1.0 Called from: [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt Entering /build/ants-8vuM8K/ants-2.1.0/ExternalApplications Called from: [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt Entering /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF Called from: [1] /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/CMakeLists.txt Returning to /build/ants-8vuM8K/ants-2.1.0/ExternalApplications Called from: [1] /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/CMakeLists.txt Returning to /build/ants-8vuM8K/ants-2.1.0 Called from: [2] /build/ants-8vuM8K/ants-2.1.0/ANTS.cmake [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt -- Configuring done -- Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu Called from: [1] /build/ants-8vuM8K/ants-2.1.0/CMakeLists.txt CMake Warning (dev) at Examples/CMakeLists.txt:42 (add_executable): Policy CMP0060 is not set: Link libraries by full path even in implicit directories. Run "cmake --help-policy CMP0060" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Some library files are in directories implicitly searched by the linker when invoked for CXX: /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libdl.so /usr/lib/x86_64-linux-gnu/libdouble-conversion.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libfftw3_threads.so /usr/lib/x86_64-linux-gnu/libfftw3f.so /usr/lib/x86_64-linux-gnu/libfftw3f_threads.so /usr/lib/x86_64-linux-gnu/libicudata.so /usr/lib/x86_64-linux-gnu/libicuuc.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libm.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libssl.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libtiff.so /usr/lib/x86_64-linux-gnu/libwrap.so /usr/lib/x86_64-linux-gnu/libxml2.so /usr/lib/x86_64-linux-gnu/libz.so For compatibility with older versions of CMake, the generated link line will ask the linker to search for these by library name. Call Stack (most recent call first): Examples/CMakeLists.txt:158 (STANDARD_ANTS_BUILD) This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt -- Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/CMakeLists.txt CMake Warning (dev) in Examples/TestSuite/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/TestSuite/CMakeLists.txt CMake Warning (dev) in Examples/TestSuite/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/TestSuite/CMakeLists.txt CMake Warning (dev) in Examples/TestSuite/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/TestSuite/CMakeLists.txt CMake Warning (dev) in Examples/TestSuite/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/TestSuite/CMakeLists.txt CMake Warning (dev) in Examples/TestSuite/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/TestSuite/CMakeLists.txt CMake Warning (dev) in Examples/TestSuite/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/TestSuite/CMakeLists.txt CMake Warning (dev) in Examples/TestSuite/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/TestSuite/CMakeLists.txt -- Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite Called from: [1] /build/ants-8vuM8K/ants-2.1.0/Examples/TestSuite/CMakeLists.txt -- Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications Called from: [1] /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/CMakeLists.txt CMake Warning (dev) in ExternalApplications/MALF/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/CMakeLists.txt CMake Warning (dev) in ExternalApplications/MALF/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/CMakeLists.txt CMake Warning (dev) in ExternalApplications/MALF/CMakeLists.txt: Policy CMP0065 is not set: Do not add flags to export symbols from executables without the ENABLE_EXPORTS target property. Run "cmake --help-policy CMP0065" for policy details. Use the cmake_policy command to set the policy and suppress this warning. For compatibility with older versions of CMake, additional flags may be added to export symbols on all executables regardless of their ENABLE_EXPORTS property. This warning is for project developers. Use -Wno-dev to suppress it. Called from: [1] /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/CMakeLists.txt -- Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF Called from: [1] /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/CMakeLists.txt -- Generating done CMake Warning: Manually-specified variables were not used by the project: ANTS_USE_GIT_PROTOC CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_SYSCONFDIR USE_SYSTEM_ITK -- Build files have been written to: /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu cd /build/ants-8vuM8K/ants-2.1.0 make[1]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0' debian/rules override_dh_auto_build make[1]: Entering directory '/build/ants-8vuM8K/ants-2.1.0' sed -e 's,$UVERSION,2.1.0,g' debian/ants.environment-modules.in >| debian/ants.environment-modules dh_auto_build cd obj-x86_64-linux-gnu make -j10 make[2]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' /usr/bin/cmake -H/build/ants-8vuM8K/ants-2.1.0 -B/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/CMakeFiles /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/antsUtilities.dir/build.make Examples/CMakeFiles/antsUtilities.dir/depend make -f Examples/TestSuite/CMakeFiles/ANTSFetchData.dir/build.make Examples/TestSuite/CMakeFiles/ANTSFetchData.dir/depend make -f ExternalApplications/MALF/CMakeFiles/sa.dir/build.make ExternalApplications/MALF/CMakeFiles/sa.dir/depend make -f ExternalApplications/MALF/CMakeFiles/jointfusion.dir/build.make ExternalApplications/MALF/CMakeFiles/jointfusion.dir/depend make -f ExternalApplications/MALF/CMakeFiles/bl.dir/build.make ExternalApplications/MALF/CMakeFiles/bl.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/antsUtilities.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples/TestSuite /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite/CMakeFiles/ANTSFetchData.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF/CMakeFiles/sa.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF/CMakeFiles/jointfusion.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF/CMakeFiles/bl.dir/DependInfo.cmake --color= Scanning dependencies of target ANTSFetchData make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/TestSuite/CMakeFiles/ANTSFetchData.dir/build.make Examples/TestSuite/CMakeFiles/ANTSFetchData.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 0%] Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/r64slice.nii.gz [ 0%] Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Frown.nii [ 0%] Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/r16slice.nii.gz [ 1%] Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Smile.nii cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite && /usr/bin/cmake -Drelative_top=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu -Dfile=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/r64slice.nii.gz -Dname=/build/ants-8vuM8K/ants-2.1.0/TestData/Data/r64slice.nii.gz -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite/ANTSFetchData_config.cmake -P /build/ants-8vuM8K/ants-2.1.0/CMake/ExternalData.cmake [ 1%] Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Frown.txt cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite && /usr/bin/cmake -Drelative_top=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu -Dfile=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Frown.nii -Dname=/build/ants-8vuM8K/ants-2.1.0/TestData/Data/Frown.nii -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite/ANTSFetchData_config.cmake -P /build/ants-8vuM8K/ants-2.1.0/CMake/ExternalData.cmake cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite && /usr/bin/cmake -Drelative_top=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu -Dfile=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/r16slice.nii.gz -Dname=/build/ants-8vuM8K/ants-2.1.0/TestData/Data/r16slice.nii.gz -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite/ANTSFetchData_config.cmake -P /build/ants-8vuM8K/ants-2.1.0/CMake/ExternalData.cmake [ 1%] Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Smile.txt cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite && /usr/bin/cmake -Drelative_top=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu -Dfile=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Smile.nii -Dname=/build/ants-8vuM8K/ants-2.1.0/TestData/Data/Smile.nii -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite/ANTSFetchData_config.cmake -P /build/ants-8vuM8K/ants-2.1.0/CMake/ExternalData.cmake cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite && /usr/bin/cmake -Drelative_top=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu -Dfile=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Frown.txt -Dname=/build/ants-8vuM8K/ants-2.1.0/TestData/Data/Frown.txt -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite/ANTSFetchData_config.cmake -P /build/ants-8vuM8K/ants-2.1.0/CMake/ExternalData.cmake cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite && /usr/bin/cmake -Drelative_top=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu -Dfile=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Smile.txt -Dname=/build/ants-8vuM8K/ants-2.1.0/TestData/Data/Smile.txt -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite/ANTSFetchData_config.cmake -P /build/ants-8vuM8K/ants-2.1.0/CMake/ExternalData.cmake -- Fetching 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"/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/Objects/MD5/8a629ee7ea32013c76af5b05f880b5c6" -- Downloaded object: "/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/Objects/MD5/84cf0e06646142e0aa4c3d3324a62701" -- Downloaded object: "/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/Objects/MD5/67a066125ba4132655c1ad91c34e06a4" -- Downloaded object: "/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/Objects/MD5/11ea9f4d17e24ab90d8bc0b4b087d235" [ 1%] Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Smile.vtk [ 1%] Generating /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Frown.vtk cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite && /usr/bin/cmake -Drelative_top=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu -Dfile=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Smile.vtk -Dname=/build/ants-8vuM8K/ants-2.1.0/TestData/Data/Smile.vtk -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite/ANTSFetchData_config.cmake -P /build/ants-8vuM8K/ants-2.1.0/CMake/ExternalData.cmake cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite && /usr/bin/cmake -Drelative_top=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu -Dfile=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalData/TestData/Data/Frown.vtk -Dname=/build/ants-8vuM8K/ants-2.1.0/TestData/Data/Frown.vtk -Dext=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/TestSuite/ANTSFetchData_config.cmake -P /build/ants-8vuM8K/ants-2.1.0/CMake/ExternalData.cmake -- Fetching "file:////build/ants-8vuM8K/ants-2.1.0/debian/testdata/MD5/f41df9ed883e63bdd31b440fcb82be6a" -- Fetching 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'/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 1%] Building CXX object ExternalApplications/MALF/CMakeFiles/jointfusion.dir/JointFusion/LabelFusion.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/jointfusion.dir/JointFusion/LabelFusion.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/LabelFusion.cxx Scanning dependencies of target bl Scanning dependencies of target sa make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f ExternalApplications/MALF/CMakeFiles/sa.dir/build.make ExternalApplications/MALF/CMakeFiles/sa.dir/build make -f ExternalApplications/MALF/CMakeFiles/bl.dir/build.make ExternalApplications/MALF/CMakeFiles/bl.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 1%] Building CXX object ExternalApplications/MALF/CMakeFiles/sa.dir/CorrectiveLearning/segAdapter.cxx.o [ 1%] Building CXX object ExternalApplications/MALF/CMakeFiles/bl.dir/CorrectiveLearning/BiasLearn.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/sa.dir/CorrectiveLearning/segAdapter.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/CorrectiveLearning/segAdapter.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/bl.dir/CorrectiveLearning/BiasLearn.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/CorrectiveLearning/BiasLearn.cxx Scanning dependencies of target antsUtilities make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/antsUtilities.dir/build.make Examples/CMakeFiles/antsUtilities.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 1%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/antsUtilities.cxx.o [ 1%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/__/Utilities/ReadWriteData.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/antsUtilities.dir/antsUtilities.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/antsUtilities.dir/__/Utilities/ReadWriteData.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/ReadWriteData.cxx [ 1%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/antsRegistrationTemplateHeader.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/antsUtilities.dir/antsRegistrationTemplateHeader.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsRegistrationTemplateHeader.cxx [ 1%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/antsRegistration2DDouble.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/antsUtilities.dir/antsRegistration2DDouble.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsRegistration2DDouble.cxx [ 2%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/antsRegistration2DFloat.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/antsUtilities.dir/antsRegistration2DFloat.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsRegistration2DFloat.cxx [ 2%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/antsRegistration3DDouble.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/antsUtilities.dir/antsRegistration3DDouble.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsRegistration3DDouble.cxx [ 2%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/antsRegistration3DFloat.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/antsUtilities.dir/antsRegistration3DFloat.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsRegistration3DFloat.cxx In file included from /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/LabelFusion.cxx:6:0: /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/WeightedVotingLabelFusionImageFilter.txx: In instantiation of 'void WeightedVotingLabelFusionImageFilter::GenerateData() [with TInputImage = itk::Image; TOutputImage = itk::Image]': /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/LabelFusion.cxx:513:3: required from 'int lfapp(int, char**) [with unsigned int VDim = 2]' /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/LabelFusion.cxx:621:31: required from here /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/WeightedVotingLabelFusionImageFilter.txx:305:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(int j = 0; j < InputImageDimension; j++) ~~^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/WeightedVotingLabelFusionImageFilter.txx: In instantiation of 'void WeightedVotingLabelFusionImageFilter::GenerateData() [with TInputImage = itk::Image; TOutputImage = itk::Image]': /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/LabelFusion.cxx:513:3: required from 'int lfapp(int, char**) [with unsigned int VDim = 3]' /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/LabelFusion.cxx:623:31: required from here /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/WeightedVotingLabelFusionImageFilter.txx:305:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/WeightedVotingLabelFusionImageFilter.txx: In instantiation of 'void WeightedVotingLabelFusionImageFilter::ComputeOffsetTable(const InputImageType*, const SizeType&, int**, size_t&, int**) [with TInputImage = itk::Image; TOutputImage = itk::Image; WeightedVotingLabelFusionImageFilter::InputImageType = itk::Image; WeightedVotingLabelFusionImageFilter::SizeType = itk::Size<2>; size_t = long unsigned int]': /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/WeightedVotingLabelFusionImageFilter.txx:176:21: required from 'void WeightedVotingLabelFusionImageFilter::GenerateData() [with TInputImage = itk::Image; TOutputImage = itk::Image]' /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/LabelFusion.cxx:513:3: required from 'int lfapp(int, char**) [with unsigned int VDim = 2]' /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/LabelFusion.cxx:621:31: required from here /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/WeightedVotingLabelFusionImageFilter.txx:133:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for(int d = 0; d < InputImageDimension; d++) ~~^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/WeightedVotingLabelFusionImageFilter.txx: In instantiation of 'void WeightedVotingLabelFusionImageFilter::ComputeOffsetTable(const InputImageType*, const SizeType&, int**, size_t&, int**) [with TInputImage = itk::Image; TOutputImage = itk::Image; WeightedVotingLabelFusionImageFilter::InputImageType = itk::Image; WeightedVotingLabelFusionImageFilter::SizeType = itk::Size<3>; size_t = long unsigned int]': /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/WeightedVotingLabelFusionImageFilter.txx:176:21: required from 'void WeightedVotingLabelFusionImageFilter::GenerateData() [with TInputImage = itk::Image; TOutputImage = itk::Image]' /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/LabelFusion.cxx:513:3: required from 'int lfapp(int, char**) [with unsigned int VDim = 3]' /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/LabelFusion.cxx:623:31: required from here /build/ants-8vuM8K/ants-2.1.0/ExternalApplications/MALF/JointFusion/WeightedVotingLabelFusionImageFilter.txx:133:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] [ 2%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/antsRegistration4DDouble.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/antsUtilities.dir/antsRegistration4DDouble.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsRegistration4DDouble.cxx [ 2%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/antsRegistration4DFloat.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/antsUtilities.dir/antsRegistration4DFloat.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsRegistration4DFloat.cxx [ 3%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/ANTsVersion.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER 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-lm -lpthread -ldl -lm [ 3%] Linking CXX executable ../../bin/sa cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF && /usr/bin/cmake -E cmake_link_script CMakeFiles/sa.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/sa.dir/CorrectiveLearning/segAdapter.cxx.o -o ../../bin/sa -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 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/usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 3%] Built target bl make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 3%] Built target sa [ 4%] Linking CXX executable ../../bin/jointfusion cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ExternalApplications/MALF && /usr/bin/cmake -E cmake_link_script CMakeFiles/jointfusion.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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/usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 4%] Built target jointfusion [ 4%] Linking CXX static library ../lib/libantsUtilities.a cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -P CMakeFiles/antsUtilities.dir/cmake_clean_target.cmake cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/antsUtilities.dir/link.txt --verbose=1 /usr/bin/ar qc ../lib/libantsUtilities.a CMakeFiles/antsUtilities.dir/antsUtilities.cxx.o CMakeFiles/antsUtilities.dir/__/Utilities/ReadWriteData.cxx.o CMakeFiles/antsUtilities.dir/antsRegistrationTemplateHeader.cxx.o CMakeFiles/antsUtilities.dir/antsRegistration2DDouble.cxx.o CMakeFiles/antsUtilities.dir/antsRegistration2DFloat.cxx.o CMakeFiles/antsUtilities.dir/antsRegistration3DDouble.cxx.o CMakeFiles/antsUtilities.dir/antsRegistration3DFloat.cxx.o CMakeFiles/antsUtilities.dir/antsRegistration4DDouble.cxx.o CMakeFiles/antsUtilities.dir/antsRegistration4DFloat.cxx.o CMakeFiles/antsUtilities.dir/ANTsVersion.cxx.o /usr/bin/ranlib ../lib/libantsUtilities.a make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 4%] Built target antsUtilities make -f Examples/CMakeFiles/l_antsUtilitiesTesting.dir/build.make Examples/CMakeFiles/l_antsUtilitiesTesting.dir/depend make -f Examples/CMakeFiles/l_antsTransformInfo.dir/build.make Examples/CMakeFiles/l_antsTransformInfo.dir/depend make -f Examples/CMakeFiles/l_DeNrrd.dir/build.make Examples/CMakeFiles/l_DeNrrd.dir/depend make -f Examples/CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/build.make Examples/CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/depend make -f Examples/CMakeFiles/l_sccan.dir/build.make Examples/CMakeFiles/l_sccan.dir/depend make -f Examples/CMakeFiles/l_MemoryTest.dir/build.make Examples/CMakeFiles/l_MemoryTest.dir/depend make -f Examples/CMakeFiles/l_LabelOverlapMeasures.dir/build.make Examples/CMakeFiles/l_LabelOverlapMeasures.dir/depend make -f Examples/CMakeFiles/l_LabelGeometryMeasures.dir/build.make Examples/CMakeFiles/l_LabelGeometryMeasures.dir/depend make -f Examples/CMakeFiles/l_RebaseTensorImage.dir/build.make Examples/CMakeFiles/l_RebaseTensorImage.dir/depend make -f Examples/CMakeFiles/l_SurfaceBasedSmoothing.dir/build.make Examples/CMakeFiles/l_SurfaceBasedSmoothing.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_MemoryTest.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_sccan.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_antsUtilitiesTesting.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_DeNrrd.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_SurfaceBasedSmoothing.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_LabelGeometryMeasures.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_antsTransformInfo.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_RebaseTensorImage.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_LabelOverlapMeasures.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/DependInfo.cmake --color= Scanning dependencies of target l_antsTransformInfo make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_antsTransformInfo.dir/build.make Examples/CMakeFiles/l_antsTransformInfo.dir/build Scanning dependencies of target l_LabelGeometryMeasures Scanning dependencies of target l_RebaseTensorImage make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_LabelGeometryMeasures.dir/build.make Examples/CMakeFiles/l_LabelGeometryMeasures.dir/build make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_RebaseTensorImage.dir/build.make Examples/CMakeFiles/l_RebaseTensorImage.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' Scanning dependencies of target l_SurfaceBasedSmoothing Scanning dependencies of target l_GetConnectedComponentsFeatureImages make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_SurfaceBasedSmoothing.dir/build.make Examples/CMakeFiles/l_SurfaceBasedSmoothing.dir/build make -f Examples/CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/build.make Examples/CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/build Scanning dependencies of target l_LabelOverlapMeasures make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_LabelOverlapMeasures.dir/build.make Examples/CMakeFiles/l_LabelOverlapMeasures.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' Scanning dependencies of target l_MemoryTest make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_MemoryTest.dir/build.make Examples/CMakeFiles/l_MemoryTest.dir/build [ 5%] Building CXX object Examples/CMakeFiles/l_antsTransformInfo.dir/antsTransformInfo.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsTransformInfo_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsTransformInfo.dir/antsTransformInfo.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsTransformInfo.cxx make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 5%] Building CXX object Examples/CMakeFiles/l_LabelOverlapMeasures.dir/LabelOverlapMeasures.cxx.o [ 5%] Building CXX object Examples/CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/GetConnectedComponentsFeatureImages.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LabelOverlapMeasures_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LabelOverlapMeasures.dir/LabelOverlapMeasures.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/LabelOverlapMeasures.cxx make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 5%] Building CXX object Examples/CMakeFiles/l_LabelGeometryMeasures.dir/LabelGeometryMeasures.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_GetConnectedComponentsFeatureImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/GetConnectedComponentsFeatureImages.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/GetConnectedComponentsFeatureImages.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LabelGeometryMeasures_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LabelGeometryMeasures.dir/LabelGeometryMeasures.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/LabelGeometryMeasures.cxx [ 5%] Building CXX object Examples/CMakeFiles/l_SurfaceBasedSmoothing.dir/SurfaceBasedSmoothing.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SurfaceBasedSmoothing_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SurfaceBasedSmoothing.dir/SurfaceBasedSmoothing.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/SurfaceBasedSmoothing.cxx [ 5%] Building CXX object Examples/CMakeFiles/l_MemoryTest.dir/MemoryTest.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MemoryTest_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MemoryTest.dir/MemoryTest.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx [ 5%] Building CXX object Examples/CMakeFiles/l_RebaseTensorImage.dir/RebaseTensorImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_RebaseTensorImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_RebaseTensorImage.dir/RebaseTensorImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/RebaseTensorImage.cxx Scanning dependencies of target l_sccan make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_sccan.dir/build.make Examples/CMakeFiles/l_sccan.dir/build Scanning dependencies of target l_antsUtilitiesTesting make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_antsUtilitiesTesting.dir/build.make Examples/CMakeFiles/l_antsUtilitiesTesting.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 5%] Building CXX object Examples/CMakeFiles/l_sccan.dir/sccan.cxx.o make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_sccan_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_sccan.dir/sccan.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx [ 5%] Building CXX object Examples/CMakeFiles/l_antsUtilitiesTesting.dir/antsUtilitiesTesting.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsUtilitiesTesting_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsUtilitiesTesting.dir/antsUtilitiesTesting.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilitiesTesting.cxx Scanning dependencies of target l_DeNrrd make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_DeNrrd.dir/build.make Examples/CMakeFiles/l_DeNrrd.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 5%] Building CXX object Examples/CMakeFiles/l_DeNrrd.dir/DeNrrd.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_DeNrrd_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_DeNrrd.dir/DeNrrd.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/DeNrrd.cxx In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:413:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:27: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'void itk::CrossCorrelationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:111:5: required from 'int ants::MemoryTest(unsigned int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:186:31: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:171:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:797:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:25: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx: In instantiation of 'void itk::AvantsMutualInformationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:115:5: required from 'int ants::MemoryTest(unsigned int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:186:31: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx:312:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:413:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:27: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'void itk::CrossCorrelationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:111:5: required from 'int ants::MemoryTest(unsigned int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:191:31: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:171:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:797:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:25: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx: In instantiation of 'void itk::AvantsMutualInformationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:115:5: required from 'int ants::MemoryTest(unsigned int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:191:31: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx:312:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ [ 5%] Building CXX object Examples/CMakeFiles/l_antsTransformInfo.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsTransformInfo_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsTransformInfo.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.h:1318:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:28: /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.hxx: In instantiation of 'TRealType itk::ants::antsSCCANObject::NetworkDecomposition(unsigned int) [with TInputImage = itk::Image; TRealType = double]': /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:1278:14: required from 'int ants::SVD_One_View(itk::ants::CommandLineParser*, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, PixelType, PixelType, PixelType, unsigned int) [with unsigned int ImageDimension = 3; PixelType = double]' /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:2332:81: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.hxx:4452:18: warning: variable 'minerr1' set but not used [-Wunused-but-set-variable] RealType minerr1; ^~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.hxx: In instantiation of 'TRealType itk::ants::antsSCCANObject::NetworkDecomposition(unsigned int) [with TInputImage = itk::Image; TRealType = double]': /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:1278:14: required from 'int ants::SVD_One_View(itk::ants::CommandLineParser*, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, PixelType, PixelType, PixelType, unsigned int) [with unsigned int ImageDimension = 4; PixelType = double]' /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:2362:81: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.hxx:4452:18: warning: variable 'minerr1' set but not used [-Wunused-but-set-variable] /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.hxx: In instantiation of 'TRealType itk::ants::antsSCCANObject::SparsePartialArnoldiCCA(unsigned int) [with TInputImage = itk::Image; TRealType = double]': /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:1528:3: required from 'int ants::SCCA_vnl(itk::ants::CommandLineParser*, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, PixelType, PixelType, PixelType, PixelType, unsigned int, PixelType) [with unsigned int ImageDimension = 3; PixelType = double]' /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:2395:125: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.hxx:5494:22: warning: variable 'lastenergy' set but not used [-Wunused-but-set-variable] RealType lastenergy = 0; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.hxx: In instantiation of 'TRealType itk::ants::antsSCCANObject::SparsePartialArnoldiCCA(unsigned int) [with TInputImage = itk::Image; TRealType = double]': /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:1528:3: required from 'int ants::SCCA_vnl(itk::ants::CommandLineParser*, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, PixelType, PixelType, PixelType, PixelType, unsigned int, PixelType) [with unsigned int ImageDimension = 4; PixelType = double]' /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:2418:112: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.hxx:5494:22: warning: variable 'lastenergy' set but not used [-Wunused-but-set-variable] In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:25:0: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:200:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:623:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:200:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:533:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:200:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:623:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:200:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:533:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:28:0: /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.h: In instantiation of 'void itk::ants::antsSCCANObject::Sparsify(itk::ants::antsSCCANObject::VectorType&, itk::ants::antsSCCANObject::RealType, bool, unsigned int, itk::ants::antsSCCANObject::ImagePointer) [with TInputImage = itk::Image; TRealType = double; itk::ants::antsSCCANObject::VectorType = vnl_vector; itk::ants::antsSCCANObject::RealType = double; itk::ants::antsSCCANObject::ImagePointer = itk::SmartPointer >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.h:828:11: required from 'void itk::ants::antsSCCANObject::SparsifyP(itk::ants::antsSCCANObject::VectorType&) [with TInputImage = itk::Image; TRealType = double; itk::ants::antsSCCANObject::VectorType = vnl_vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.hxx:4581:5: required from 'TRealType itk::ants::antsSCCANObject::NetworkDecomposition(unsigned int) [with TInputImage = itk::Image; TRealType = double]' /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:1278:14: required from 'int ants::SVD_One_View(itk::ants::CommandLineParser*, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, PixelType, PixelType, PixelType, unsigned int) [with unsigned int ImageDimension = 3; PixelType = double]' /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:2332:81: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.h:883:18: warning: variable 'lastfnm' set but not used [-Wunused-but-set-variable] RealType lastfnm = 1; ^~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.h: In instantiation of 'void itk::ants::antsSCCANObject::Sparsify(itk::ants::antsSCCANObject::VectorType&, itk::ants::antsSCCANObject::RealType, bool, unsigned int, itk::ants::antsSCCANObject::ImagePointer) [with TInputImage = itk::Image; TRealType = double; itk::ants::antsSCCANObject::VectorType = vnl_vector; itk::ants::antsSCCANObject::RealType = double; itk::ants::antsSCCANObject::ImagePointer = itk::SmartPointer >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.h:828:11: required from 'void itk::ants::antsSCCANObject::SparsifyP(itk::ants::antsSCCANObject::VectorType&) [with TInputImage = itk::Image; TRealType = double; itk::ants::antsSCCANObject::VectorType = vnl_vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.hxx:4581:5: required from 'TRealType itk::ants::antsSCCANObject::NetworkDecomposition(unsigned int) [with TInputImage = itk::Image; TRealType = double]' /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:1278:14: required from 'int ants::SVD_One_View(itk::ants::CommandLineParser*, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, unsigned int, PixelType, PixelType, PixelType, unsigned int) [with unsigned int ImageDimension = 4; PixelType = double]' /build/ants-8vuM8K/ants-2.1.0/Examples/sccan.cxx:2362:81: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/antsSCCANObject.h:883:18: warning: variable 'lastfnm' set but not used [-Wunused-but-set-variable] In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:413:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:27: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairB(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:296:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:200:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:429:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairC(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:314:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:200:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:492:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairB(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:296:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:200:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:429:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairC(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:314:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/MemoryTest.cxx:200:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:492:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ [ 5%] Building CXX object Examples/CMakeFiles/l_antsTransformInfo.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsTransformInfo_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsTransformInfo.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 5%] Building CXX object Examples/CMakeFiles/l_DeNrrd.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_DeNrrd_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_DeNrrd.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 5%] Linking CXX shared library ../lib/libl_antsTransformInfo.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_antsTransformInfo.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_antsTransformInfo.so.2 -o ../lib/libl_antsTransformInfo.so.2.1.0 CMakeFiles/l_antsTransformInfo.dir/antsTransformInfo.cxx.o CMakeFiles/l_antsTransformInfo.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_antsTransformInfo.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 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/usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 5%] Building CXX object Examples/CMakeFiles/l_LabelOverlapMeasures.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LabelOverlapMeasures_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory 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/usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_RebaseTensorImage.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 5%] Building CXX object Examples/CMakeFiles/l_DeNrrd.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_DeNrrd_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary 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-I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LabelOverlapMeasures.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 6%] Building CXX object Examples/CMakeFiles/l_RebaseTensorImage.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_RebaseTensorImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof 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/usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 6%] Building CXX object Examples/CMakeFiles/l_SurfaceBasedSmoothing.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SurfaceBasedSmoothing_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SurfaceBasedSmoothing.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 6%] Linking CXX shared library ../lib/libl_LabelOverlapMeasures.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_LabelOverlapMeasures.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_LabelOverlapMeasures.so.2 -o ../lib/libl_LabelOverlapMeasures.so.2.1.0 CMakeFiles/l_LabelOverlapMeasures.dir/LabelOverlapMeasures.cxx.o CMakeFiles/l_LabelOverlapMeasures.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_LabelOverlapMeasures.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 6%] Linking CXX shared library ../lib/libl_RebaseTensorImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_RebaseTensorImage.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_RebaseTensorImage.so.2 -o ../lib/libl_RebaseTensorImage.so.2.1.0 CMakeFiles/l_RebaseTensorImage.dir/RebaseTensorImage.cxx.o CMakeFiles/l_RebaseTensorImage.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_RebaseTensorImage.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_antsTransformInfo.so.2.1.0 ../lib/libl_antsTransformInfo.so.2 ../lib/libl_antsTransformInfo.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_DeNrrd.so.2.1.0 ../lib/libl_DeNrrd.so.2 ../lib/libl_DeNrrd.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 6%] Built target l_antsTransformInfo make -f Examples/CMakeFiles/l_ThresholdImage.dir/build.make Examples/CMakeFiles/l_ThresholdImage.dir/depend make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 6%] Built target l_DeNrrd make -f Examples/CMakeFiles/l_CreateImage.dir/build.make Examples/CMakeFiles/l_CreateImage.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ThresholdImage.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_CreateImage.dir/DependInfo.cmake --color= cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_RebaseTensorImage.so.2.1.0 ../lib/libl_RebaseTensorImage.so.2 ../lib/libl_RebaseTensorImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_LabelOverlapMeasures.so.2.1.0 ../lib/libl_LabelOverlapMeasures.so.2 ../lib/libl_LabelOverlapMeasures.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 6%] Built target l_RebaseTensorImage make -f Examples/CMakeFiles/l_LabelClustersUniquely.dir/build.make Examples/CMakeFiles/l_LabelClustersUniquely.dir/depend [ 6%] Built target l_LabelOverlapMeasures make -f Examples/CMakeFiles/l_antsApplyTransformsToPoints.dir/build.make Examples/CMakeFiles/l_antsApplyTransformsToPoints.dir/depend Scanning dependencies of target l_CreateImage make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_CreateImage.dir/build.make Examples/CMakeFiles/l_CreateImage.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 6%] Building CXX object Examples/CMakeFiles/l_CreateImage.dir/CreateImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateImage.dir/CreateImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/CreateImage.cxx make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_LabelClustersUniquely.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_antsApplyTransformsToPoints.dir/DependInfo.cmake --color= Scanning dependencies of target l_LabelClustersUniquely make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_LabelClustersUniquely.dir/build.make Examples/CMakeFiles/l_LabelClustersUniquely.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 6%] Building CXX object Examples/CMakeFiles/l_LabelClustersUniquely.dir/LabelClustersUniquely.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LabelClustersUniquely_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LabelClustersUniquely.dir/LabelClustersUniquely.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/LabelClustersUniquely.cxx Scanning dependencies of target l_ThresholdImage make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ThresholdImage.dir/build.make Examples/CMakeFiles/l_ThresholdImage.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 6%] Building CXX object Examples/CMakeFiles/l_ThresholdImage.dir/ThresholdImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ThresholdImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ThresholdImage.dir/ThresholdImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ThresholdImage.cxx [ 7%] Building CXX object Examples/CMakeFiles/l_SurfaceBasedSmoothing.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SurfaceBasedSmoothing_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SurfaceBasedSmoothing.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx Scanning dependencies of target l_antsApplyTransformsToPoints make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_antsApplyTransformsToPoints.dir/build.make Examples/CMakeFiles/l_antsApplyTransformsToPoints.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 7%] Building CXX object Examples/CMakeFiles/l_antsApplyTransformsToPoints.dir/antsApplyTransformsToPoints.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsApplyTransformsToPoints_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsApplyTransformsToPoints.dir/antsApplyTransformsToPoints.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsApplyTransformsToPoints.cxx [ 7%] Linking CXX shared library ../lib/libl_SurfaceBasedSmoothing.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_SurfaceBasedSmoothing.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_SurfaceBasedSmoothing.so.2 -o ../lib/libl_SurfaceBasedSmoothing.so.2.1.0 CMakeFiles/l_SurfaceBasedSmoothing.dir/SurfaceBasedSmoothing.cxx.o CMakeFiles/l_SurfaceBasedSmoothing.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_SurfaceBasedSmoothing.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_SurfaceBasedSmoothing.so.2.1.0 ../lib/libl_SurfaceBasedSmoothing.so.2 ../lib/libl_SurfaceBasedSmoothing.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 7%] Built target l_SurfaceBasedSmoothing make -f Examples/CMakeFiles/l_ResampleImageBySpacing.dir/build.make Examples/CMakeFiles/l_ResampleImageBySpacing.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ResampleImageBySpacing.dir/DependInfo.cmake --color= Scanning dependencies of target l_ResampleImageBySpacing make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ResampleImageBySpacing.dir/build.make Examples/CMakeFiles/l_ResampleImageBySpacing.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 7%] Building CXX object Examples/CMakeFiles/l_ResampleImageBySpacing.dir/ResampleImageBySpacing.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ResampleImageBySpacing_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ResampleImageBySpacing.dir/ResampleImageBySpacing.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ResampleImageBySpacing.cxx [ 7%] Building CXX object Examples/CMakeFiles/l_ThresholdImage.dir/__/Utilities/antsCommandLineParser.cxx.o [ 7%] Building CXX object Examples/CMakeFiles/l_LabelClustersUniquely.dir/__/Utilities/antsCommandLineParser.cxx.o [ 8%] Building CXX object Examples/CMakeFiles/l_ResampleImageBySpacing.dir/__/Utilities/antsCommandLineParser.cxx.o [ 7%] Building CXX object Examples/CMakeFiles/l_CreateImage.dir/__/Utilities/antsCommandLineParser.cxx.o [ 8%] Building CXX object Examples/CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/__/Utilities/antsCommandLineParser.cxx.o [ 8%] Building CXX object Examples/CMakeFiles/l_antsUtilitiesTesting.dir/__/Utilities/antsCommandLineParser.cxx.o [ 8%] Building CXX object Examples/CMakeFiles/l_LabelGeometryMeasures.dir/__/Utilities/antsCommandLineParser.cxx.o [ 8%] Building CXX object Examples/CMakeFiles/l_MemoryTest.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ThresholdImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ThresholdImage.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LabelClustersUniquely_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LabelClustersUniquely.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateImage.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_GetConnectedComponentsFeatureImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsUtilitiesTesting_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsUtilitiesTesting.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ResampleImageBySpacing_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ResampleImageBySpacing.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LabelGeometryMeasures_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LabelGeometryMeasures.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MemoryTest_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MemoryTest.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 8%] Building CXX object Examples/CMakeFiles/l_sccan.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_sccan_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_sccan.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 8%] Building CXX object Examples/CMakeFiles/l_ThresholdImage.dir/__/Utilities/antsCommandLineOption.cxx.o [ 8%] Building CXX object Examples/CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/__/Utilities/antsCommandLineOption.cxx.o [ 9%] Building CXX object Examples/CMakeFiles/l_LabelClustersUniquely.dir/__/Utilities/antsCommandLineOption.cxx.o [ 9%] Building CXX object Examples/CMakeFiles/l_CreateImage.dir/__/Utilities/antsCommandLineOption.cxx.o [ 10%] Building CXX object Examples/CMakeFiles/l_ResampleImageBySpacing.dir/__/Utilities/antsCommandLineOption.cxx.o [ 11%] Building CXX object Examples/CMakeFiles/l_antsUtilitiesTesting.dir/__/Utilities/antsCommandLineOption.cxx.o [ 11%] Building CXX object Examples/CMakeFiles/l_LabelGeometryMeasures.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LabelClustersUniquely_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LabelClustersUniquely.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ThresholdImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ThresholdImage.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsUtilitiesTesting_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsUtilitiesTesting.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LabelGeometryMeasures_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LabelGeometryMeasures.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateImage.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ResampleImageBySpacing_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ResampleImageBySpacing.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_GetConnectedComponentsFeatureImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 11%] Building CXX object Examples/CMakeFiles/l_sccan.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_sccan_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_sccan.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 12%] Building CXX object Examples/CMakeFiles/l_MemoryTest.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MemoryTest_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MemoryTest.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 13%] Linking CXX shared library ../lib/libl_LabelGeometryMeasures.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_LabelGeometryMeasures.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_LabelGeometryMeasures.so.2 -o ../lib/libl_LabelGeometryMeasures.so.2.1.0 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/usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 14%] Linking CXX shared library ../lib/libl_ThresholdImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ThresholdImage.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ThresholdImage.so.2 -o ../lib/libl_ThresholdImage.so.2.1.0 CMakeFiles/l_ThresholdImage.dir/ThresholdImage.cxx.o CMakeFiles/l_ThresholdImage.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ThresholdImage.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 14%] Linking CXX shared library ../lib/libl_LabelClustersUniquely.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_LabelClustersUniquely.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_LabelClustersUniquely.so.2 -o ../lib/libl_LabelClustersUniquely.so.2.1.0 CMakeFiles/l_LabelClustersUniquely.dir/LabelClustersUniquely.cxx.o CMakeFiles/l_LabelClustersUniquely.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_LabelClustersUniquely.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 14%] Linking CXX shared library ../lib/libl_MemoryTest.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_MemoryTest.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_MemoryTest.so.2 -o ../lib/libl_MemoryTest.so.2.1.0 CMakeFiles/l_MemoryTest.dir/MemoryTest.cxx.o CMakeFiles/l_MemoryTest.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_MemoryTest.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 15%] Linking CXX shared library ../lib/libl_CreateImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_CreateImage.dir/link.txt --verbose=1 [ 15%] Linking CXX shared library ../lib/libl_ResampleImageBySpacing.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ResampleImageBySpacing.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_CreateImage.so.2 -o ../lib/libl_CreateImage.so.2.1.0 CMakeFiles/l_CreateImage.dir/CreateImage.cxx.o CMakeFiles/l_CreateImage.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_CreateImage.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ResampleImageBySpacing.so.2 -o ../lib/libl_ResampleImageBySpacing.so.2.1.0 CMakeFiles/l_ResampleImageBySpacing.dir/ResampleImageBySpacing.cxx.o CMakeFiles/l_ResampleImageBySpacing.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ResampleImageBySpacing.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 15%] Linking CXX shared library ../lib/libl_sccan.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_sccan.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_sccan.so.2 -o ../lib/libl_sccan.so.2.1.0 CMakeFiles/l_sccan.dir/sccan.cxx.o CMakeFiles/l_sccan.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_sccan.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 15%] Linking CXX shared library ../lib/libl_GetConnectedComponentsFeatureImages.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_GetConnectedComponentsFeatureImages.so.2 -o ../lib/libl_GetConnectedComponentsFeatureImages.so.2.1.0 CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/GetConnectedComponentsFeatureImages.cxx.o CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_GetConnectedComponentsFeatureImages.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 15%] Linking CXX shared library ../lib/libl_antsUtilitiesTesting.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_antsUtilitiesTesting.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_antsUtilitiesTesting.so.2 -o ../lib/libl_antsUtilitiesTesting.so.2.1.0 CMakeFiles/l_antsUtilitiesTesting.dir/antsUtilitiesTesting.cxx.o CMakeFiles/l_antsUtilitiesTesting.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_antsUtilitiesTesting.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_CreateImage.so.2.1.0 ../lib/libl_CreateImage.so.2 ../lib/libl_CreateImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ThresholdImage.so.2.1.0 ../lib/libl_ThresholdImage.so.2 ../lib/libl_ThresholdImage.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_LabelClustersUniquely.so.2.1.0 ../lib/libl_LabelClustersUniquely.so.2 ../lib/libl_LabelClustersUniquely.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ResampleImageBySpacing.so.2.1.0 ../lib/libl_ResampleImageBySpacing.so.2 ../lib/libl_ResampleImageBySpacing.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_MemoryTest.so.2.1.0 ../lib/libl_MemoryTest.so.2 ../lib/libl_MemoryTest.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_antsUtilitiesTesting.so.2.1.0 ../lib/libl_antsUtilitiesTesting.so.2 ../lib/libl_antsUtilitiesTesting.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_LabelGeometryMeasures.so.2.1.0 ../lib/libl_LabelGeometryMeasures.so.2 ../lib/libl_LabelGeometryMeasures.so [ 15%] Built target l_CreateImage make -f Examples/CMakeFiles/l_ClusterImageStatistics.dir/build.make Examples/CMakeFiles/l_ClusterImageStatistics.dir/depend make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 15%] Built target l_ThresholdImage make -f Examples/CMakeFiles/l_SmoothImage.dir/build.make Examples/CMakeFiles/l_SmoothImage.dir/depend cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_GetConnectedComponentsFeatureImages.so.2.1.0 ../lib/libl_GetConnectedComponentsFeatureImages.so.2 ../lib/libl_GetConnectedComponentsFeatureImages.so [ 15%] Built target l_LabelClustersUniquely make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_TextureCooccurrenceFeatures.dir/build.make Examples/CMakeFiles/l_TextureCooccurrenceFeatures.dir/depend [ 15%] Built target l_MemoryTest make -f Examples/CMakeFiles/l_MultiplyImages.dir/build.make Examples/CMakeFiles/l_MultiplyImages.dir/depend [ 15%] Built target l_ResampleImageBySpacing make -f Examples/CMakeFiles/l_WarpTensorImageMultiTransform.dir/build.make Examples/CMakeFiles/l_WarpTensorImageMultiTransform.dir/depend [ 15%] Built target l_antsUtilitiesTesting make -f Examples/CMakeFiles/l_ImageSetStatistics.dir/build.make Examples/CMakeFiles/l_ImageSetStatistics.dir/depend cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_sccan.so.2.1.0 ../lib/libl_sccan.so.2 ../lib/libl_sccan.so make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_TextureCooccurrenceFeatures.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_WarpTensorImageMultiTransform.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_MultiplyImages.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ClusterImageStatistics.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_SmoothImage.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 15%] Built target l_GetConnectedComponentsFeatureImages make -f Examples/CMakeFiles/l_WarpImageMultiTransform.dir/build.make Examples/CMakeFiles/l_WarpImageMultiTransform.dir/depend [ 15%] Built target l_sccan make -f Examples/CMakeFiles/l_ImageMath.dir/build.make Examples/CMakeFiles/l_ImageMath.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ImageSetStatistics.dir/DependInfo.cmake --color= [ 15%] Built target l_LabelGeometryMeasures make -f Examples/CMakeFiles/l_LaplacianThickness.dir/build.make Examples/CMakeFiles/l_LaplacianThickness.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ImageMath.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_LaplacianThickness.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_WarpImageMultiTransform.dir/DependInfo.cmake --color= Scanning dependencies of target l_WarpImageMultiTransform Scanning dependencies of target l_ImageSetStatistics Scanning dependencies of target l_ClusterImageStatistics Scanning dependencies of target l_MultiplyImages Scanning dependencies of target l_TextureCooccurrenceFeatures Scanning dependencies of target l_SmoothImage Scanning dependencies of target l_WarpTensorImageMultiTransform Scanning dependencies of target l_LaplacianThickness make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_MultiplyImages.dir/build.make Examples/CMakeFiles/l_MultiplyImages.dir/build make -f Examples/CMakeFiles/l_SmoothImage.dir/build.make Examples/CMakeFiles/l_SmoothImage.dir/build make -f Examples/CMakeFiles/l_TextureCooccurrenceFeatures.dir/build.make Examples/CMakeFiles/l_TextureCooccurrenceFeatures.dir/build make -f Examples/CMakeFiles/l_ImageSetStatistics.dir/build.make Examples/CMakeFiles/l_ImageSetStatistics.dir/build make -f Examples/CMakeFiles/l_WarpImageMultiTransform.dir/build.make Examples/CMakeFiles/l_WarpImageMultiTransform.dir/build make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ClusterImageStatistics.dir/build.make Examples/CMakeFiles/l_ClusterImageStatistics.dir/build make -f Examples/CMakeFiles/l_WarpTensorImageMultiTransform.dir/build.make Examples/CMakeFiles/l_WarpTensorImageMultiTransform.dir/build make -f Examples/CMakeFiles/l_LaplacianThickness.dir/build.make Examples/CMakeFiles/l_LaplacianThickness.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 15%] Building CXX object Examples/CMakeFiles/l_SmoothImage.dir/SmoothImage.cxx.o [ 15%] Building CXX object Examples/CMakeFiles/l_ImageSetStatistics.dir/ImageSetStatistics.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageSetStatistics_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageSetStatistics.dir/ImageSetStatistics.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ImageSetStatistics.cxx [ 15%] Building CXX object Examples/CMakeFiles/l_MultiplyImages.dir/MultiplyImages.cxx.o [ 15%] Building CXX object Examples/CMakeFiles/l_WarpImageMultiTransform.dir/WarpImageMultiTransform.cxx.o [ 15%] Building CXX object Examples/CMakeFiles/l_ClusterImageStatistics.dir/ClusterImageStatistics.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ClusterImageStatistics_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ClusterImageStatistics.dir/ClusterImageStatistics.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ClusterImageStatistics.cxx [ 15%] Building CXX object Examples/CMakeFiles/l_WarpTensorImageMultiTransform.dir/WarpTensorImageMultiTransform.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_WarpTensorImageMultiTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_WarpTensorImageMultiTransform.dir/WarpTensorImageMultiTransform.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTensorImageMultiTransform.cxx [ 16%] Building CXX object Examples/CMakeFiles/l_LaplacianThickness.dir/LaplacianThickness.cxx.o [ 16%] Building CXX object Examples/CMakeFiles/l_TextureCooccurrenceFeatures.dir/TextureCooccurrenceFeatures.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_TextureCooccurrenceFeatures_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_TextureCooccurrenceFeatures.dir/TextureCooccurrenceFeatures.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/TextureCooccurrenceFeatures.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SmoothImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SmoothImage.dir/SmoothImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/SmoothImage.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LaplacianThickness_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LaplacianThickness.dir/LaplacianThickness.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/LaplacianThickness.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MultiplyImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MultiplyImages.dir/MultiplyImages.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/MultiplyImages.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_WarpImageMultiTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_WarpImageMultiTransform.dir/WarpImageMultiTransform.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.h:335:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:7: /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image, 2>; TOutputImage = itk::Image, 2>; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:529:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiInverseAffineOnlySinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image, 2>; TOutputImage = itk::Image, 2>; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.h:489:73: required from 'void ants::GetLargestSizeAfterWarp(typename WarperType::Pointer&, typename ImageType::Pointer&, typename ImageType::SizeType&, typename ImageType::PointType&) [with WarperType = itk::WarpImageMultiTransformFilter, 2>, itk::Image, 2>, itk::Image, 2>, itk::MatrixOffsetTransformBase >; ImageType = itk::Image, 2>; typename WarperType::Pointer = itk::SmartPointer, 2>, itk::Image, 2>, itk::Image, 2>, itk::MatrixOffsetTransformBase > >; typename ImageType::Pointer = itk::SmartPointer, 2> >; typename ImageType::SizeType = itk::Size<2>; typename ImageType::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:572:53: required from 'void ants::WarpImageMultiTransform(char*, char*, TRAN_OPT_QUEUE&, MISC_OPT&) [with int ImageDimension = 2; unsigned int NVectorComponents = 2; TRAN_OPT_QUEUE = std::vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:838:110: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image, 2>; TOutputImage = itk::Image, 2>; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:529:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiInverseAffineOnlySinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image, 2>; TOutputImage = itk::Image, 2>; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.h:489:73: required from 'void ants::GetLargestSizeAfterWarp(typename WarperType::Pointer&, typename ImageType::Pointer&, typename ImageType::SizeType&, typename ImageType::PointType&) [with WarperType = itk::WarpImageMultiTransformFilter, 2>, itk::Image, 2>, itk::Image, 2>, itk::MatrixOffsetTransformBase >; ImageType = itk::Image, 2>; typename WarperType::Pointer = itk::SmartPointer, 2>, itk::Image, 2>, itk::Image, 2>, itk::MatrixOffsetTransformBase > >; typename ImageType::Pointer = itk::SmartPointer, 2> >; typename ImageType::SizeType = itk::Size<2>; typename ImageType::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:572:53: required from 'void ants::WarpImageMultiTransform(char*, char*, TRAN_OPT_QUEUE&, MISC_OPT&) [with int ImageDimension = 2; unsigned int NVectorComponents = 1; TRAN_OPT_QUEUE = std::vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:841:110: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:529:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiInverseAffineOnlySinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.h:489:73: required from 'void ants::GetLargestSizeAfterWarp(typename WarperType::Pointer&, typename ImageType::Pointer&, typename ImageType::SizeType&, typename ImageType::PointType&) [with WarperType = itk::WarpImageMultiTransformFilter, 3>, itk::Image, 3>, itk::Image, 3>, itk::MatrixOffsetTransformBase >; ImageType = itk::Image, 3>; typename WarperType::Pointer = itk::SmartPointer, 3>, itk::Image, 3>, itk::Image, 3>, itk::MatrixOffsetTransformBase > >; typename ImageType::Pointer = itk::SmartPointer, 3> >; typename ImageType::SizeType = itk::Size<3>; typename ImageType::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:572:53: required from 'void ants::WarpImageMultiTransform(char*, char*, TRAN_OPT_QUEUE&, MISC_OPT&) [with int ImageDimension = 3; unsigned int NVectorComponents = 3; TRAN_OPT_QUEUE = std::vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:850:110: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:529:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiInverseAffineOnlySinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.h:489:73: required from 'void ants::GetLargestSizeAfterWarp(typename WarperType::Pointer&, typename ImageType::Pointer&, typename ImageType::SizeType&, typename ImageType::PointType&) [with WarperType = itk::WarpImageMultiTransformFilter, 3>, itk::Image, 3>, itk::Image, 3>, itk::MatrixOffsetTransformBase >; ImageType = itk::Image, 3>; typename WarperType::Pointer = itk::SmartPointer, 3>, itk::Image, 3>, itk::Image, 3>, itk::MatrixOffsetTransformBase > >; typename ImageType::Pointer = itk::SmartPointer, 3> >; typename ImageType::SizeType = itk::Size<3>; typename ImageType::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:572:53: required from 'void ants::WarpImageMultiTransform(char*, char*, TRAN_OPT_QUEUE&, MISC_OPT&) [with int ImageDimension = 3; unsigned int NVectorComponents = 6; TRAN_OPT_QUEUE = std::vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:853:110: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:529:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiInverseAffineOnlySinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image, 3>; TOutputImage = itk::Image, 3>; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.h:489:73: required from 'void ants::GetLargestSizeAfterWarp(typename WarperType::Pointer&, typename ImageType::Pointer&, typename ImageType::SizeType&, typename ImageType::PointType&) [with WarperType = itk::WarpImageMultiTransformFilter, 3>, itk::Image, 3>, itk::Image, 3>, itk::MatrixOffsetTransformBase >; ImageType = itk::Image, 3>; typename WarperType::Pointer = itk::SmartPointer, 3>, itk::Image, 3>, itk::Image, 3>, itk::MatrixOffsetTransformBase > >; typename ImageType::Pointer = itk::SmartPointer, 3> >; typename ImageType::SizeType = itk::Size<3>; typename ImageType::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:572:53: required from 'void ants::WarpImageMultiTransform(char*, char*, TRAN_OPT_QUEUE&, MISC_OPT&) [with int ImageDimension = 3; unsigned int NVectorComponents = 1; TRAN_OPT_QUEUE = std::vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:856:110: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image, 4>; TOutputImage = itk::Image, 4>; TDisplacementField = itk::Image, 4>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:529:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiInverseAffineOnlySinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image, 4>; TOutputImage = itk::Image, 4>; TDisplacementField = itk::Image, 4>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.h:489:73: required from 'void ants::GetLargestSizeAfterWarp(typename WarperType::Pointer&, typename ImageType::Pointer&, typename ImageType::SizeType&, typename ImageType::PointType&) [with WarperType = itk::WarpImageMultiTransformFilter, 4>, itk::Image, 4>, itk::Image, 4>, itk::MatrixOffsetTransformBase >; ImageType = itk::Image, 4>; typename WarperType::Pointer = itk::SmartPointer, 4>, itk::Image, 4>, itk::Image, 4>, itk::MatrixOffsetTransformBase > >; typename ImageType::Pointer = itk::SmartPointer, 4> >; typename ImageType::SizeType = itk::Size<4>; typename ImageType::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:572:53: required from 'void ants::WarpImageMultiTransform(char*, char*, TRAN_OPT_QUEUE&, MISC_OPT&) [with int ImageDimension = 4; unsigned int NVectorComponents = 4; TRAN_OPT_QUEUE = std::vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:865:110: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image, 4>; TOutputImage = itk::Image, 4>; TDisplacementField = itk::Image, 4>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:529:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiInverseAffineOnlySinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image, 4>; TOutputImage = itk::Image, 4>; TDisplacementField = itk::Image, 4>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.h:489:73: required from 'void ants::GetLargestSizeAfterWarp(typename WarperType::Pointer&, typename ImageType::Pointer&, typename ImageType::SizeType&, typename ImageType::PointType&) [with WarperType = itk::WarpImageMultiTransformFilter, 4>, itk::Image, 4>, itk::Image, 4>, itk::MatrixOffsetTransformBase >; ImageType = itk::Image, 4>; typename WarperType::Pointer = itk::SmartPointer, 4>, itk::Image, 4>, itk::Image, 4>, itk::MatrixOffsetTransformBase > >; typename ImageType::Pointer = itk::SmartPointer, 4> >; typename ImageType::SizeType = itk::Size<4>; typename ImageType::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:572:53: required from 'void ants::WarpImageMultiTransform(char*, char*, TRAN_OPT_QUEUE&, MISC_OPT&) [with int ImageDimension = 4; unsigned int NVectorComponents = 1; TRAN_OPT_QUEUE = std::vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpImageMultiTransform.cxx:868:110: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.h:335:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTensorImageMultiTransform.cxx:14: /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:529:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiInverseAffineOnlySinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.h:489:73: required from 'void ants::GetLargestSizeAfterWarp(typename WarperType::Pointer&, typename ImageType::Pointer&, typename ImageType::SizeType&, typename ImageType::PointType&) [with WarperType = itk::WarpImageMultiTransformFilter, itk::Image, itk::Image, 2>, itk::MatrixOffsetTransformBase >; ImageType = itk::Image, 2>; typename WarperType::Pointer = itk::SmartPointer, itk::Image, itk::Image, 2>, itk::MatrixOffsetTransformBase > >; typename ImageType::Pointer = itk::SmartPointer, 2> >; typename ImageType::SizeType = itk::Size<2>; typename ImageType::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTensorImageMultiTransform.cxx:446:61: required from 'void ants::WarpImageMultiTransform(char*, char*, TRAN_OPT_QUEUE&, MISC_OPT&) [with int ImageDimension = 2; TRAN_OPT_QUEUE = std::vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTensorImageMultiTransform.cxx:615:101: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:529:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiInverseAffineOnlySinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.h:489:73: required from 'void ants::GetLargestSizeAfterWarp(typename WarperType::Pointer&, typename ImageType::Pointer&, typename ImageType::SizeType&, typename ImageType::PointType&) [with WarperType = itk::WarpImageMultiTransformFilter, itk::Image, itk::Image, 3>, itk::MatrixOffsetTransformBase >; ImageType = itk::Image, 3>; typename WarperType::Pointer = itk::SmartPointer, itk::Image, itk::Image, 3>, itk::MatrixOffsetTransformBase > >; typename ImageType::Pointer = itk::SmartPointer, 3> >; typename ImageType::SizeType = itk::Size<3>; typename ImageType::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTensorImageMultiTransform.cxx:446:61: required from 'void ants::WarpImageMultiTransform(char*, char*, TRAN_OPT_QUEUE&, MISC_OPT&) [with int ImageDimension = 3; TRAN_OPT_QUEUE = std::vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTensorImageMultiTransform.cxx:620:101: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] /build/ants-8vuM8K/ants-2.1.0/Examples/ImageSetStatistics.cxx: In function 'void ants::LocalMean(typename TImage::Pointer, unsigned int, typename TImage::Pointer) [with TImage = itk::Image]': /build/ants-8vuM8K/ants-2.1.0/Examples/ImageSetStatistics.cxx:181:5: warning: iteration 2 invokes undefined behavior [-Waggressive-loop-optimizations] rad[j] = nhood; ^~~ /build/ants-8vuM8K/ants-2.1.0/Examples/ImageSetStatistics.cxx:179:30: note: within this loop for( unsigned int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/ImageSetStatistics.cxx:211:25: warning: iteration 2 invokes undefined behavior [-Waggressive-loop-optimizations] if( index[dd] < 0 || index[dd] > static_cast(imagesize[dd] - 1) ) ~~~~~~~~~~^~~ /build/ants-8vuM8K/ants-2.1.0/Examples/ImageSetStatistics.cxx:209:38: note: within this loop for( unsigned int dd = 0; dd < ImageDimension; dd++ ) ~~~^~~~~~~~~~~~~~~~ [ 17%] Building CXX object Examples/CMakeFiles/l_antsApplyTransformsToPoints.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsApplyTransformsToPoints_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsApplyTransformsToPoints.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx Scanning dependencies of target l_ImageMath make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ImageMath.dir/build.make Examples/CMakeFiles/l_ImageMath.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 17%] Building CXX object Examples/CMakeFiles/l_ImageMath.dir/ImageMath.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageMath_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageMath.dir/ImageMath.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ImageMath.cxx [ 17%] Building CXX object Examples/CMakeFiles/l_antsApplyTransformsToPoints.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsApplyTransformsToPoints_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsApplyTransformsToPoints.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx /build/ants-8vuM8K/ants-2.1.0/Examples/ImageMath.cxx: In function 'void ants::MakeAffineTransform(int, char**)': /build/ants-8vuM8K/ants-2.1.0/Examples/ImageMath.cxx:372:56: warning: typedef 'PixelType' locally defined but not used [-Wunused-local-typedefs] typedef float PixelType; ^~~~~~~~~ [ 17%] Building CXX object Examples/CMakeFiles/l_ImageSetStatistics.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageSetStatistics_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageSetStatistics.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 17%] Linking CXX shared library ../lib/libl_antsApplyTransformsToPoints.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_antsApplyTransformsToPoints.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_antsApplyTransformsToPoints.so.2 -o ../lib/libl_antsApplyTransformsToPoints.so.2.1.0 CMakeFiles/l_antsApplyTransformsToPoints.dir/antsApplyTransformsToPoints.cxx.o CMakeFiles/l_antsApplyTransformsToPoints.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_antsApplyTransformsToPoints.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_antsApplyTransformsToPoints.so.2.1.0 ../lib/libl_antsApplyTransformsToPoints.so.2 ../lib/libl_antsApplyTransformsToPoints.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 17%] Built target l_antsApplyTransformsToPoints [ 17%] Building CXX object Examples/CMakeFiles/l_ClusterImageStatistics.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ClusterImageStatistics_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ClusterImageStatistics.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 18%] Building CXX object Examples/CMakeFiles/l_ImageSetStatistics.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageSetStatistics_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageSetStatistics.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 18%] Building CXX object Examples/CMakeFiles/l_TextureCooccurrenceFeatures.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_TextureCooccurrenceFeatures_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_TextureCooccurrenceFeatures.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 18%] Linking CXX shared library ../lib/libl_ImageSetStatistics.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ImageSetStatistics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ImageSetStatistics.so.2 -o ../lib/libl_ImageSetStatistics.so.2.1.0 CMakeFiles/l_ImageSetStatistics.dir/ImageSetStatistics.cxx.o CMakeFiles/l_ImageSetStatistics.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ImageSetStatistics.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so 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/usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ImageSetStatistics.so.2.1.0 ../lib/libl_ImageSetStatistics.so.2 ../lib/libl_ImageSetStatistics.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 18%] Building CXX object Examples/CMakeFiles/l_WarpTensorImageMultiTransform.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_WarpTensorImageMultiTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_WarpTensorImageMultiTransform.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 18%] Built target l_ImageSetStatistics [ 19%] Building CXX object Examples/CMakeFiles/l_LaplacianThickness.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LaplacianThickness_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LaplacianThickness.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 19%] Building CXX object Examples/CMakeFiles/l_TextureCooccurrenceFeatures.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_TextureCooccurrenceFeatures_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_TextureCooccurrenceFeatures.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 19%] Building CXX object Examples/CMakeFiles/l_SmoothImage.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SmoothImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SmoothImage.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 19%] Building CXX object Examples/CMakeFiles/l_MultiplyImages.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MultiplyImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MultiplyImages.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 19%] Linking CXX shared library ../lib/libl_TextureCooccurrenceFeatures.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_TextureCooccurrenceFeatures.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_TextureCooccurrenceFeatures.so.2 -o ../lib/libl_TextureCooccurrenceFeatures.so.2.1.0 CMakeFiles/l_TextureCooccurrenceFeatures.dir/TextureCooccurrenceFeatures.cxx.o CMakeFiles/l_TextureCooccurrenceFeatures.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_TextureCooccurrenceFeatures.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so 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/usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_TextureCooccurrenceFeatures.so.2.1.0 ../lib/libl_TextureCooccurrenceFeatures.so.2 ../lib/libl_TextureCooccurrenceFeatures.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 19%] Built target l_TextureCooccurrenceFeatures [ 19%] Building CXX object Examples/CMakeFiles/l_WarpImageMultiTransform.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_WarpImageMultiTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_WarpImageMultiTransform.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 19%] Building CXX object Examples/CMakeFiles/l_MultiplyImages.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MultiplyImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MultiplyImages.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 19%] Building CXX object Examples/CMakeFiles/l_SmoothImage.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SmoothImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SmoothImage.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 19%] Building CXX object Examples/CMakeFiles/l_WarpTensorImageMultiTransform.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_WarpTensorImageMultiTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_WarpTensorImageMultiTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 19%] Building CXX object Examples/CMakeFiles/l_LaplacianThickness.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LaplacianThickness_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LaplacianThickness.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 19%] Linking CXX shared library ../lib/libl_SmoothImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_SmoothImage.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_SmoothImage.so.2 -o ../lib/libl_SmoothImage.so.2.1.0 CMakeFiles/l_SmoothImage.dir/SmoothImage.cxx.o CMakeFiles/l_SmoothImage.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_SmoothImage.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 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/usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 20%] Building CXX object Examples/CMakeFiles/l_ClusterImageStatistics.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ClusterImageStatistics_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ClusterImageStatistics.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 20%] Building CXX object Examples/CMakeFiles/l_WarpImageMultiTransform.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_WarpImageMultiTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_WarpImageMultiTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_SmoothImage.so.2.1.0 ../lib/libl_SmoothImage.so.2 ../lib/libl_SmoothImage.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 20%] Built target l_SmoothImage [ 21%] Building CXX object Examples/CMakeFiles/l_ImageMath.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageMath_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageMath.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx make -f Examples/CMakeFiles/l_CopyImageHeaderInformation.dir/build.make Examples/CMakeFiles/l_CopyImageHeaderInformation.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_CopyImageHeaderInformation.dir/DependInfo.cmake --color= Scanning dependencies of target l_CopyImageHeaderInformation make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_CopyImageHeaderInformation.dir/build.make Examples/CMakeFiles/l_CopyImageHeaderInformation.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 21%] Building CXX object Examples/CMakeFiles/l_CopyImageHeaderInformation.dir/CopyImageHeaderInformation.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CopyImageHeaderInformation_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CopyImageHeaderInformation.dir/CopyImageHeaderInformation.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/CopyImageHeaderInformation.cxx [ 21%] Building CXX object Examples/CMakeFiles/l_ImageMath.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageMath_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageMath.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 21%] Linking CXX shared library ../lib/libl_ClusterImageStatistics.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ClusterImageStatistics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ClusterImageStatistics.so.2 -o ../lib/libl_ClusterImageStatistics.so.2.1.0 CMakeFiles/l_ClusterImageStatistics.dir/ClusterImageStatistics.cxx.o CMakeFiles/l_ClusterImageStatistics.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ClusterImageStatistics.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make -f Examples/CMakeFiles/l_AverageImages.dir/build.make Examples/CMakeFiles/l_AverageImages.dir/depend cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ClusterImageStatistics.so.2.1.0 ../lib/libl_ClusterImageStatistics.so.2 ../lib/libl_ClusterImageStatistics.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_AverageImages.dir/DependInfo.cmake --color= Scanning dependencies of target l_AverageImages make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_AverageImages.dir/build.make Examples/CMakeFiles/l_AverageImages.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 21%] Building CXX object Examples/CMakeFiles/l_AverageImages.dir/AverageImages.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageImages.dir/AverageImages.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/AverageImages.cxx [ 21%] Built target l_ClusterImageStatistics [ 21%] Building CXX object Examples/CMakeFiles/l_CopyImageHeaderInformation.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CopyImageHeaderInformation_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CopyImageHeaderInformation.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 21%] Linking CXX shared library ../lib/libl_WarpTensorImageMultiTransform.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_WarpTensorImageMultiTransform.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_WarpTensorImageMultiTransform.so.2 -o ../lib/libl_WarpTensorImageMultiTransform.so.2.1.0 CMakeFiles/l_WarpTensorImageMultiTransform.dir/WarpTensorImageMultiTransform.cxx.o CMakeFiles/l_WarpTensorImageMultiTransform.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_WarpTensorImageMultiTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 21%] Building CXX object Examples/CMakeFiles/l_AverageImages.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageImages.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx make -f Examples/CMakeFiles/l_ImageCompare.dir/build.make Examples/CMakeFiles/l_ImageCompare.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ImageCompare.dir/DependInfo.cmake --color= cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_WarpTensorImageMultiTransform.so.2.1.0 ../lib/libl_WarpTensorImageMultiTransform.so.2 ../lib/libl_WarpTensorImageMultiTransform.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 21%] Built target l_WarpTensorImageMultiTransform make -f Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/build.make Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/DependInfo.cmake --color= Scanning dependencies of target l_ImageCompare make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ImageCompare.dir/build.make Examples/CMakeFiles/l_ImageCompare.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 21%] Building CXX object Examples/CMakeFiles/l_ImageCompare.dir/ImageCompare.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageCompare_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageCompare.dir/ImageCompare.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ImageCompare.cxx Scanning dependencies of target l_ANTSUseLandmarkImagesToGetBSplineDisplacementField make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/build.make Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 21%] Building CXX object Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSUseLandmarkImagesToGetBSplineDisplacementField_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx [ 21%] Building CXX object Examples/CMakeFiles/l_AverageImages.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageImages.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 21%] Building CXX object Examples/CMakeFiles/l_ImageCompare.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageCompare_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageCompare.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx make -f Examples/CMakeFiles/l_antsMotionCorr.dir/build.make Examples/CMakeFiles/l_antsMotionCorr.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_antsMotionCorr.dir/DependInfo.cmake --color= Scanning dependencies of target l_antsMotionCorr make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_antsMotionCorr.dir/build.make Examples/CMakeFiles/l_antsMotionCorr.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 21%] Building CXX object Examples/CMakeFiles/l_antsMotionCorr.dir/antsMotionCorr.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsMotionCorr_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsMotionCorr.dir/antsMotionCorr.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx [ 21%] Building CXX object Examples/CMakeFiles/l_ImageCompare.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageCompare_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageCompare.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 21%] Linking CXX shared library ../lib/libl_LaplacianThickness.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_LaplacianThickness.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_LaplacianThickness.so.2 -o ../lib/libl_LaplacianThickness.so.2.1.0 CMakeFiles/l_LaplacianThickness.dir/LaplacianThickness.cxx.o CMakeFiles/l_LaplacianThickness.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_LaplacianThickness.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_LaplacianThickness.so.2.1.0 ../lib/libl_LaplacianThickness.so.2 ../lib/libl_LaplacianThickness.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 21%] Built target l_LaplacianThickness make -f Examples/CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/build.make Examples/CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/DependInfo.cmake --color= Scanning dependencies of target l_ConvertInputImagePixelTypeToFloat make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/build.make Examples/CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 21%] Building CXX object Examples/CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/ConvertInputImagePixelTypeToFloat.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertInputImagePixelTypeToFloat_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/ConvertInputImagePixelTypeToFloat.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ConvertInputImagePixelTypeToFloat.cxx [ 21%] Building CXX object Examples/CMakeFiles/l_antsMotionCorr.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsMotionCorr_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsMotionCorr.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx: In function 'int ants::ants_motion(itk::ants::CommandLineParser*)': /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1119:56: warning: declaration of 'VectorType' shadows a previous local [-Wshadow] typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:445:53: note: shadowed declaration is here typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1121:57: warning: declaration of 'DisplacementFieldType' shadows a previous local [-Wshadow] typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:446:53: note: shadowed declaration is here typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1206:56: warning: declaration of 'VectorType' shadows a previous local [-Wshadow] typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:445:53: note: shadowed declaration is here typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1208:57: warning: declaration of 'DisplacementFieldType' shadows a previous local [-Wshadow] typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:446:53: note: shadowed declaration is here typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx: In instantiation of 'int ants::ants_motion(itk::ants::CommandLineParser*) [with unsigned int ImageDimension = 2]': /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1788:30: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1119:56: warning: declaration of 'VectorType' shadows a previous local [-Wshadow] typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:445:53: note: shadowed declaration is here typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1121:57: warning: declaration of 'DisplacementFieldType' shadows a previous local [-Wshadow] typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:446:53: note: shadowed declaration is here typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1206:56: warning: declaration of 'VectorType' shadows a previous local [-Wshadow] typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:445:53: note: shadowed declaration is here typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1208:57: warning: declaration of 'DisplacementFieldType' shadows a previous local [-Wshadow] typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:446:53: note: shadowed declaration is here typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ [ 22%] Linking CXX shared library ../lib/libl_ImageCompare.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ImageCompare.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ImageCompare.so.2 -o ../lib/libl_ImageCompare.so.2.1.0 CMakeFiles/l_ImageCompare.dir/ImageCompare.cxx.o CMakeFiles/l_ImageCompare.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ImageCompare.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx: In instantiation of 'int ants::ants_motion(itk::ants::CommandLineParser*) [with unsigned int ImageDimension = 3]': /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1793:30: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1119:56: warning: declaration of 'VectorType' shadows a previous local [-Wshadow] typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:445:53: note: shadowed declaration is here typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1121:57: warning: declaration of 'DisplacementFieldType' shadows a previous local [-Wshadow] typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:446:53: note: shadowed declaration is here typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1206:56: warning: declaration of 'VectorType' shadows a previous local [-Wshadow] typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:445:53: note: shadowed declaration is here typedef itk::Vector VectorType; ^~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:1208:57: warning: declaration of 'DisplacementFieldType' shadows a previous local [-Wshadow] typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorr.cxx:446:53: note: shadowed declaration is here typedef itk::Image DisplacementFieldType; ^~~~~~~~~~~~~~~~~~~~~ cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ImageCompare.so.2.1.0 ../lib/libl_ImageCompare.so.2 ../lib/libl_ImageCompare.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 22%] Built target l_ImageCompare [ 22%] Building CXX object Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSUseLandmarkImagesToGetBSplineDisplacementField_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 23%] Linking CXX shared library ../lib/libl_WarpImageMultiTransform.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_WarpImageMultiTransform.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_WarpImageMultiTransform.so.2 -o ../lib/libl_WarpImageMultiTransform.so.2.1.0 CMakeFiles/l_WarpImageMultiTransform.dir/WarpImageMultiTransform.cxx.o CMakeFiles/l_WarpImageMultiTransform.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_WarpImageMultiTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_WarpImageMultiTransform.so.2.1.0 ../lib/libl_WarpImageMultiTransform.so.2 ../lib/libl_WarpImageMultiTransform.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 23%] Built target l_WarpImageMultiTransform make -f Examples/CMakeFiles/l_ConvertImagePixelType.dir/build.make Examples/CMakeFiles/l_ConvertImagePixelType.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ConvertImagePixelType.dir/DependInfo.cmake --color= Scanning dependencies of target l_ConvertImagePixelType make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ConvertImagePixelType.dir/build.make Examples/CMakeFiles/l_ConvertImagePixelType.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary/antsFastMarchingImageFilter.h:456:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/ImageMath.cxx:143: /build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary/antsFastMarchingImageFilter.hxx: In member function 'void itk::FMarchingImageFilter::PrintSelf(std::ostream&, itk::Indent) const [with TLevelSet = itk::Image; TSpeedImage = itk::Image]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary/antsFastMarchingImageFilter.hxx:94:7: warning: this statement may fall through [-Wimplicit-fallthrough=] os << "None" << std::endl; ^~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary/antsFastMarchingImageFilter.hxx:96:5: note: here case NoHandles: ^~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary/antsFastMarchingImageFilter.hxx:98:7: warning: this statement may fall through [-Wimplicit-fallthrough=] os << "No handles" << std::endl; ^~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary/antsFastMarchingImageFilter.hxx:100:5: note: here case Strict: ^~~~ [ 23%] Building CXX object Examples/CMakeFiles/l_ConvertImagePixelType.dir/ConvertImagePixelType.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertImagePixelType_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertImagePixelType.dir/ConvertImagePixelType.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ConvertImagePixelType.cxx [ 23%] Building CXX object Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSUseLandmarkImagesToGetBSplineDisplacementField_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 23%] Building CXX object Examples/CMakeFiles/l_antsMotionCorr.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsMotionCorr_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsMotionCorr.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx /build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary/antsFastMarchingImageFilter.hxx: In member function 'void itk::FMarchingImageFilter::PrintSelf(std::ostream&, itk::Indent) const [with TLevelSet = itk::Image; TSpeedImage = itk::Image]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary/antsFastMarchingImageFilter.hxx:94:7: warning: this statement may fall through [-Wimplicit-fallthrough=] os << "None" << std::endl; ^~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary/antsFastMarchingImageFilter.hxx:96:5: note: here case NoHandles: ^~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary/antsFastMarchingImageFilter.hxx:98:7: warning: this statement may fall through [-Wimplicit-fallthrough=] os << "No handles" << std::endl; ^~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary/antsFastMarchingImageFilter.hxx:100:5: note: here case Strict: ^~~~ make -f Examples/CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/build.make Examples/CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/DependInfo.cmake --color= [ 24%] Building CXX object Examples/CMakeFiles/l_ConvertImagePixelType.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertImagePixelType_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertImagePixelType.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx Scanning dependencies of target l_antsMotionCorrDiffusionDirection make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/build.make Examples/CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 24%] Building CXX object Examples/CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/antsMotionCorrDiffusionDirection.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsMotionCorrDiffusionDirection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/antsMotionCorrDiffusionDirection.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsMotionCorrDiffusionDirection.cxx [ 24%] Linking CXX shared library ../lib/libl_MultiplyImages.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_MultiplyImages.dir/link.txt --verbose=1 [ 24%] Building CXX object Examples/CMakeFiles/l_CopyImageHeaderInformation.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CopyImageHeaderInformation_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CopyImageHeaderInformation.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_MultiplyImages.so.2 -o ../lib/libl_MultiplyImages.so.2.1.0 CMakeFiles/l_MultiplyImages.dir/MultiplyImages.cxx.o CMakeFiles/l_MultiplyImages.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_MultiplyImages.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_MultiplyImages.so.2.1.0 ../lib/libl_MultiplyImages.so.2 ../lib/libl_MultiplyImages.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 24%] Built target l_MultiplyImages make -f Examples/CMakeFiles/l_ConvertToJpg.dir/build.make Examples/CMakeFiles/l_ConvertToJpg.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ConvertToJpg.dir/DependInfo.cmake --color= Scanning dependencies of target l_ConvertToJpg make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ConvertToJpg.dir/build.make Examples/CMakeFiles/l_ConvertToJpg.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 25%] Building CXX object Examples/CMakeFiles/l_ConvertToJpg.dir/ConvertToJpg.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertToJpg_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertToJpg.dir/ConvertToJpg.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ConvertToJpg.cxx [ 25%] Linking CXX shared library ../lib/libl_CopyImageHeaderInformation.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_CopyImageHeaderInformation.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_CopyImageHeaderInformation.so.2 -o ../lib/libl_CopyImageHeaderInformation.so.2.1.0 CMakeFiles/l_CopyImageHeaderInformation.dir/CopyImageHeaderInformation.cxx.o CMakeFiles/l_CopyImageHeaderInformation.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_CopyImageHeaderInformation.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_CopyImageHeaderInformation.so.2.1.0 ../lib/libl_CopyImageHeaderInformation.so.2 ../lib/libl_CopyImageHeaderInformation.so [ 25%] Building CXX object Examples/CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsMotionCorrDiffusionDirection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 25%] Built target l_CopyImageHeaderInformation make -f Examples/CMakeFiles/l_AverageAffineTransform.dir/build.make Examples/CMakeFiles/l_AverageAffineTransform.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_AverageAffineTransform.dir/DependInfo.cmake --color= Scanning dependencies of target l_AverageAffineTransform make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_AverageAffineTransform.dir/build.make Examples/CMakeFiles/l_AverageAffineTransform.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 25%] Building CXX object Examples/CMakeFiles/l_AverageAffineTransform.dir/AverageAffineTransform.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageAffineTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageAffineTransform.dir/AverageAffineTransform.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/AverageAffineTransform.cxx [ 26%] Linking CXX shared library ../lib/libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so.2 -o ../lib/libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so.2.1.0 CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx.o CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so.2.1.0 ../lib/libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so.2 ../lib/libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 26%] Built target l_ANTSUseLandmarkImagesToGetBSplineDisplacementField [ 26%] Building CXX object Examples/CMakeFiles/l_ConvertToJpg.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertToJpg_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertToJpg.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 26%] Building CXX object Examples/CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsMotionCorrDiffusionDirection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 26%] Building CXX object Examples/CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertInputImagePixelTypeToFloat_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 27%] Building CXX object Examples/CMakeFiles/l_AverageAffineTransform.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageAffineTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageAffineTransform.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 27%] Linking CXX shared library ../lib/libl_antsMotionCorrDiffusionDirection.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_antsMotionCorrDiffusionDirection.so.2 -o ../lib/libl_antsMotionCorrDiffusionDirection.so.2.1.0 CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/antsMotionCorrDiffusionDirection.cxx.o CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_antsMotionCorrDiffusionDirection.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 27%] Building CXX object Examples/CMakeFiles/l_ConvertToJpg.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertToJpg_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertToJpg.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_antsMotionCorrDiffusionDirection.so.2.1.0 ../lib/libl_antsMotionCorrDiffusionDirection.so.2 ../lib/libl_antsMotionCorrDiffusionDirection.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 27%] Built target l_antsMotionCorrDiffusionDirection make -f Examples/CMakeFiles/l_AverageTensorImages.dir/build.make Examples/CMakeFiles/l_AverageTensorImages.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_AverageTensorImages.dir/DependInfo.cmake --color= Scanning dependencies of target l_AverageTensorImages make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_AverageTensorImages.dir/build.make Examples/CMakeFiles/l_AverageTensorImages.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 28%] Building CXX object Examples/CMakeFiles/l_AverageTensorImages.dir/AverageTensorImages.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageTensorImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageTensorImages.dir/AverageTensorImages.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/AverageTensorImages.cxx [ 28%] Building CXX object Examples/CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertInputImagePixelTypeToFloat_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 28%] Building CXX object Examples/CMakeFiles/l_AverageAffineTransform.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageAffineTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageAffineTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 28%] Building CXX object Examples/CMakeFiles/l_ConvertImagePixelType.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertImagePixelType_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertImagePixelType.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make -f Examples/CMakeFiles/l_antsAffineInitializer.dir/build.make Examples/CMakeFiles/l_antsAffineInitializer.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_antsAffineInitializer.dir/DependInfo.cmake --color= [ 28%] Building CXX object Examples/CMakeFiles/l_AverageTensorImages.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageTensorImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageTensorImages.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 28%] Linking CXX shared library ../lib/libl_AverageAffineTransform.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_AverageAffineTransform.dir/link.txt --verbose=1 Scanning dependencies of target l_antsAffineInitializer make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_antsAffineInitializer.dir/build.make Examples/CMakeFiles/l_antsAffineInitializer.dir/build /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_AverageAffineTransform.so.2 -o ../lib/libl_AverageAffineTransform.so.2.1.0 CMakeFiles/l_AverageAffineTransform.dir/AverageAffineTransform.cxx.o CMakeFiles/l_AverageAffineTransform.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_AverageAffineTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 28%] Building CXX object Examples/CMakeFiles/l_antsAffineInitializer.dir/antsAffineInitializer.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsAffineInitializer_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsAffineInitializer.dir/antsAffineInitializer.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_AverageAffineTransform.so.2.1.0 ../lib/libl_AverageAffineTransform.so.2 ../lib/libl_AverageAffineTransform.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 28%] Built target l_AverageAffineTransform [ 28%] Building CXX object Examples/CMakeFiles/l_AverageTensorImages.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageTensorImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageTensorImages.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 28%] Linking CXX shared library ../lib/libl_ConvertToJpg.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ConvertToJpg.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ConvertToJpg.so.2 -o ../lib/libl_ConvertToJpg.so.2.1.0 CMakeFiles/l_ConvertToJpg.dir/ConvertToJpg.cxx.o CMakeFiles/l_ConvertToJpg.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ConvertToJpg.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ConvertToJpg.so.2.1.0 ../lib/libl_ConvertToJpg.so.2 ../lib/libl_ConvertToJpg.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 28%] Built target l_ConvertToJpg make -f Examples/CMakeFiles/l_MeasureMinMaxMean.dir/build.make Examples/CMakeFiles/l_MeasureMinMaxMean.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_MeasureMinMaxMean.dir/DependInfo.cmake --color= Scanning dependencies of target l_MeasureMinMaxMean make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_MeasureMinMaxMean.dir/build.make Examples/CMakeFiles/l_MeasureMinMaxMean.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 29%] Building CXX object Examples/CMakeFiles/l_MeasureMinMaxMean.dir/MeasureMinMaxMean.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MeasureMinMaxMean_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MeasureMinMaxMean.dir/MeasureMinMaxMean.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureMinMaxMean.cxx [ 29%] Building CXX object Examples/CMakeFiles/l_antsAffineInitializer.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsAffineInitializer_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsAffineInitializer.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx make -f Examples/CMakeFiles/l_MeasureImageSimilarity.dir/build.make Examples/CMakeFiles/l_MeasureImageSimilarity.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_MeasureImageSimilarity.dir/DependInfo.cmake --color= Scanning dependencies of target l_MeasureImageSimilarity make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_MeasureImageSimilarity.dir/build.make Examples/CMakeFiles/l_MeasureImageSimilarity.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 29%] Building CXX object Examples/CMakeFiles/l_MeasureImageSimilarity.dir/MeasureImageSimilarity.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MeasureImageSimilarity_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MeasureImageSimilarity.dir/MeasureImageSimilarity.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx: In function 'int ants::antsAffineInitializerImp(int, char**)': /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx:192:36: warning: typedef 'AffineTypeS' locally defined but not used [-Wunused-local-typedefs] ImageDimension>::TransformType AffineTypeS; ^~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx: In instantiation of 'int ants::antsAffineInitializerImp(int, char**) [with unsigned int ImageDimension = 2]': /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx:597:52: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx:176:16: warning: variable 'localoptimizeriterations' set but not used [-Wunused-but-set-variable] unsigned int localoptimizeriterations = 20; // for local search via conjgrad ^~~~~~~~~~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx: In instantiation of 'int ants::antsAffineInitializerImp(int, char**) [with unsigned int ImageDimension = 3]': /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx:601:52: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx:176:16: warning: variable 'localoptimizeriterations' set but not used [-Wunused-but-set-variable] /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx: In instantiation of 'int ants::antsAffineInitializerImp(int, char**) [with unsigned int ImageDimension = 4]': /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx:604:52: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/antsAffineInitializer.cxx:176:16: warning: variable 'localoptimizeriterations' set but not used [-Wunused-but-set-variable] In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:797:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:25: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx: In instantiation of 'void itk::AvantsMutualInformationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:218:5: required from 'int ants::MeasureImageSimilarity(unsigned int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:370:61: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx:312:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:804:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:26: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.cxx: In instantiation of 'void itk::SpatialMutualInformationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:225:5: required from 'int ants::MeasureImageSimilarity(unsigned int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:370:61: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.cxx:339:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:797:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:25: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx: In instantiation of 'void itk::AvantsMutualInformationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:218:5: required from 'int ants::MeasureImageSimilarity(unsigned int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:375:61: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx:312:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:804:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:26: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.cxx: In instantiation of 'void itk::SpatialMutualInformationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:225:5: required from 'int ants::MeasureImageSimilarity(unsigned int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:375:61: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.cxx:339:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ [ 29%] Linking CXX shared library ../lib/libl_AverageTensorImages.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_AverageTensorImages.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_AverageTensorImages.so.2 -o ../lib/libl_AverageTensorImages.so.2.1.0 CMakeFiles/l_AverageTensorImages.dir/AverageTensorImages.cxx.o CMakeFiles/l_AverageTensorImages.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_AverageTensorImages.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:413:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:28: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'void itk::CrossCorrelationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:171:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:26:0: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h: In instantiation of 'itk::SpatialMutualInformationRegistrationFunction::VectorType itk::SpatialMutualInformationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::SpatialMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::SpatialMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::SpatialMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:599:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h: In instantiation of 'itk::SpatialMutualInformationRegistrationFunction::VectorType itk::SpatialMutualInformationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::SpatialMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::SpatialMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::SpatialMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:500:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:25:0: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:623:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:533:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:413:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:28: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'void itk::CrossCorrelationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:171:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:26:0: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h: In instantiation of 'itk::SpatialMutualInformationRegistrationFunction::VectorType itk::SpatialMutualInformationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::SpatialMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::SpatialMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::SpatialMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:599:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h: In instantiation of 'itk::SpatialMutualInformationRegistrationFunction::VectorType itk::SpatialMutualInformationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::SpatialMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::SpatialMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::SpatialMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:500:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:25:0: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:623:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:533:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_AverageTensorImages.so.2.1.0 ../lib/libl_AverageTensorImages.so.2 ../lib/libl_AverageTensorImages.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 29%] Built target l_AverageTensorImages make -f Examples/CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/build.make Examples/CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/DependInfo.cmake --color= In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:413:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:28: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairB(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:296:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:429:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairC(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:314:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:492:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairB(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:296:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:429:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairC(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:314:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/MeasureImageSimilarity.cxx:402:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:492:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ [ 30%] Building CXX object Examples/CMakeFiles/l_antsAffineInitializer.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsAffineInitializer_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsAffineInitializer.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx Scanning dependencies of target l_ANTSUseDeformationFieldToGetAffineTransform make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/build.make Examples/CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 31%] Building CXX object Examples/CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/ANTSUseDeformationFieldToGetAffineTransform.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSUseDeformationFieldToGetAffineTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/ANTSUseDeformationFieldToGetAffineTransform.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ANTSUseDeformationFieldToGetAffineTransform.cxx [ 31%] Building CXX object Examples/CMakeFiles/l_MeasureMinMaxMean.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MeasureMinMaxMean_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MeasureMinMaxMean.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 31%] Building CXX object Examples/CMakeFiles/l_MeasureImageSimilarity.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MeasureImageSimilarity_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MeasureImageSimilarity.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 31%] Linking CXX shared library ../lib/libl_ConvertImagePixelType.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ConvertImagePixelType.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ConvertImagePixelType.so.2 -o ../lib/libl_ConvertImagePixelType.so.2.1.0 CMakeFiles/l_ConvertImagePixelType.dir/ConvertImagePixelType.cxx.o CMakeFiles/l_ConvertImagePixelType.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ConvertImagePixelType.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ConvertImagePixelType.so.2.1.0 ../lib/libl_ConvertImagePixelType.so.2 ../lib/libl_ConvertImagePixelType.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 31%] Built target l_ConvertImagePixelType [ 31%] Building CXX object Examples/CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSUseDeformationFieldToGetAffineTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 31%] Building CXX object Examples/CMakeFiles/l_MeasureImageSimilarity.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MeasureImageSimilarity_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MeasureImageSimilarity.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make -f Examples/CMakeFiles/l_PrintHeader.dir/build.make Examples/CMakeFiles/l_PrintHeader.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_PrintHeader.dir/DependInfo.cmake --color= Scanning dependencies of target l_PrintHeader make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_PrintHeader.dir/build.make Examples/CMakeFiles/l_PrintHeader.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 31%] Building CXX object Examples/CMakeFiles/l_PrintHeader.dir/PrintHeader.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_PrintHeader_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_PrintHeader.dir/PrintHeader.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/PrintHeader.cxx [ 31%] Building CXX object Examples/CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSUseDeformationFieldToGetAffineTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 31%] Building CXX object Examples/CMakeFiles/l_MeasureMinMaxMean.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_MeasureMinMaxMean_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_MeasureMinMaxMean.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 31%] Linking CXX shared library ../lib/libl_ANTSUseDeformationFieldToGetAffineTransform.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ANTSUseDeformationFieldToGetAffineTransform.so.2 -o ../lib/libl_ANTSUseDeformationFieldToGetAffineTransform.so.2.1.0 CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/ANTSUseDeformationFieldToGetAffineTransform.cxx.o CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ANTSUseDeformationFieldToGetAffineTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ANTSUseDeformationFieldToGetAffineTransform.so.2.1.0 ../lib/libl_ANTSUseDeformationFieldToGetAffineTransform.so.2 ../lib/libl_ANTSUseDeformationFieldToGetAffineTransform.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 31%] Built target l_ANTSUseDeformationFieldToGetAffineTransform make -f Examples/CMakeFiles/l_TextureRunLengthFeatures.dir/build.make Examples/CMakeFiles/l_TextureRunLengthFeatures.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_TextureRunLengthFeatures.dir/DependInfo.cmake --color= Scanning dependencies of target l_TextureRunLengthFeatures make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_TextureRunLengthFeatures.dir/build.make Examples/CMakeFiles/l_TextureRunLengthFeatures.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 31%] Building CXX object Examples/CMakeFiles/l_TextureRunLengthFeatures.dir/TextureRunLengthFeatures.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_TextureRunLengthFeatures_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_TextureRunLengthFeatures.dir/TextureRunLengthFeatures.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/TextureRunLengthFeatures.cxx [ 31%] Linking CXX shared library ../lib/libl_AverageImages.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_AverageImages.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_AverageImages.so.2 -o ../lib/libl_AverageImages.so.2.1.0 CMakeFiles/l_AverageImages.dir/AverageImages.cxx.o CMakeFiles/l_AverageImages.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_AverageImages.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_AverageImages.so.2.1.0 ../lib/libl_AverageImages.so.2 ../lib/libl_AverageImages.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 31%] Built target l_AverageImages [ 32%] Building CXX object Examples/CMakeFiles/l_PrintHeader.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_PrintHeader_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_PrintHeader.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 32%] Building CXX object Examples/CMakeFiles/l_TextureRunLengthFeatures.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_TextureRunLengthFeatures_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_TextureRunLengthFeatures.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx make -f Examples/CMakeFiles/l_ExtractRegionFromImage.dir/build.make Examples/CMakeFiles/l_ExtractRegionFromImage.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ExtractRegionFromImage.dir/DependInfo.cmake --color= Scanning dependencies of target l_ExtractRegionFromImage make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ExtractRegionFromImage.dir/build.make Examples/CMakeFiles/l_ExtractRegionFromImage.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 33%] Building CXX object Examples/CMakeFiles/l_ExtractRegionFromImage.dir/ExtractRegionFromImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ExtractRegionFromImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ExtractRegionFromImage.dir/ExtractRegionFromImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ExtractRegionFromImage.cxx [ 33%] Building CXX object Examples/CMakeFiles/l_PrintHeader.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_PrintHeader_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_PrintHeader.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 34%] Linking CXX shared library ../lib/libl_ConvertInputImagePixelTypeToFloat.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ConvertInputImagePixelTypeToFloat.so.2 -o ../lib/libl_ConvertInputImagePixelTypeToFloat.so.2.1.0 CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/ConvertInputImagePixelTypeToFloat.cxx.o CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ConvertInputImagePixelTypeToFloat.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ConvertInputImagePixelTypeToFloat.so.2.1.0 ../lib/libl_ConvertInputImagePixelTypeToFloat.so.2 ../lib/libl_ConvertInputImagePixelTypeToFloat.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 34%] Built target l_ConvertInputImagePixelTypeToFloat make -f Examples/CMakeFiles/ConvertImagePixelType.dir/build.make Examples/CMakeFiles/ConvertImagePixelType.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/ConvertImagePixelType.dir/DependInfo.cmake --color= [ 35%] Building CXX object Examples/CMakeFiles/l_TextureRunLengthFeatures.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_TextureRunLengthFeatures_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_TextureRunLengthFeatures.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 35%] Linking CXX shared library ../lib/libl_PrintHeader.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_PrintHeader.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_PrintHeader.so.2 -o ../lib/libl_PrintHeader.so.2.1.0 CMakeFiles/l_PrintHeader.dir/PrintHeader.cxx.o CMakeFiles/l_PrintHeader.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_PrintHeader.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm Scanning dependencies of target ConvertImagePixelType make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/ConvertImagePixelType.dir/build.make Examples/CMakeFiles/ConvertImagePixelType.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 35%] Building CXX object Examples/CMakeFiles/ConvertImagePixelType.dir/cli_ConvertImagePixelType.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/ConvertImagePixelType.dir/cli_ConvertImagePixelType.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_ConvertImagePixelType.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_PrintHeader.so.2.1.0 ../lib/libl_PrintHeader.so.2 ../lib/libl_PrintHeader.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 35%] Built target l_PrintHeader make -f Examples/CMakeFiles/WarpTensorImageMultiTransform.dir/build.make Examples/CMakeFiles/WarpTensorImageMultiTransform.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/WarpTensorImageMultiTransform.dir/DependInfo.cmake --color= [ 36%] Linking CXX executable ../bin/ConvertImagePixelType cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConvertImagePixelType.dir/link.txt --verbose=1 Scanning dependencies of target WarpTensorImageMultiTransform make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/WarpTensorImageMultiTransform.dir/build.make Examples/CMakeFiles/WarpTensorImageMultiTransform.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 37%] Building CXX object Examples/CMakeFiles/WarpTensorImageMultiTransform.dir/cli_WarpTensorImageMultiTransform.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/WarpTensorImageMultiTransform.dir/cli_WarpTensorImageMultiTransform.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_WarpTensorImageMultiTransform.cxx /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ConvertImagePixelType.dir/cli_ConvertImagePixelType.cxx.o -o ../bin/ConvertImagePixelType -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_ConvertImagePixelType.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 37%] Building CXX object Examples/CMakeFiles/l_ExtractRegionFromImage.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ExtractRegionFromImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ExtractRegionFromImage.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 37%] Linking CXX executable ../bin/WarpTensorImageMultiTransform cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/WarpTensorImageMultiTransform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/WarpTensorImageMultiTransform.dir/cli_WarpTensorImageMultiTransform.cxx.o -o ../bin/WarpTensorImageMultiTransform -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_WarpTensorImageMultiTransform.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 37%] Built target ConvertImagePixelType [ 37%] Built target WarpTensorImageMultiTransform [ 37%] Building CXX object Examples/CMakeFiles/l_ExtractRegionFromImage.dir/__/Utilities/antsCommandLineOption.cxx.o make -f Examples/CMakeFiles/l_ImageIntensityStatistics.dir/build.make Examples/CMakeFiles/l_ImageIntensityStatistics.dir/depend cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ExtractRegionFromImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ExtractRegionFromImage.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ImageIntensityStatistics.dir/DependInfo.cmake --color= Scanning dependencies of target l_ImageIntensityStatistics make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ImageIntensityStatistics.dir/build.make Examples/CMakeFiles/l_ImageIntensityStatistics.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 37%] Building CXX object Examples/CMakeFiles/l_ImageIntensityStatistics.dir/ImageIntensityStatistics.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageIntensityStatistics_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageIntensityStatistics.dir/ImageIntensityStatistics.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ImageIntensityStatistics.cxx [ 37%] Linking CXX shared library ../lib/libl_MeasureImageSimilarity.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_MeasureImageSimilarity.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_MeasureImageSimilarity.so.2 -o ../lib/libl_MeasureImageSimilarity.so.2.1.0 CMakeFiles/l_MeasureImageSimilarity.dir/MeasureImageSimilarity.cxx.o CMakeFiles/l_MeasureImageSimilarity.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_MeasureImageSimilarity.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_MeasureImageSimilarity.so.2.1.0 ../lib/libl_MeasureImageSimilarity.so.2 ../lib/libl_MeasureImageSimilarity.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 37%] Built target l_MeasureImageSimilarity make -f Examples/CMakeFiles/l_ResetDirection.dir/build.make Examples/CMakeFiles/l_ResetDirection.dir/depend make -f Examples/CMakeFiles/l_CompositeTransformUtil.dir/build.make Examples/CMakeFiles/l_CompositeTransformUtil.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ResetDirection.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_CompositeTransformUtil.dir/DependInfo.cmake --color= Scanning dependencies of target l_ResetDirection make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ResetDirection.dir/build.make Examples/CMakeFiles/l_ResetDirection.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 37%] Building CXX object Examples/CMakeFiles/l_ResetDirection.dir/ResetDirection.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ResetDirection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ResetDirection.dir/ResetDirection.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ResetDirection.cxx Scanning dependencies of target l_CompositeTransformUtil make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_CompositeTransformUtil.dir/build.make Examples/CMakeFiles/l_CompositeTransformUtil.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 37%] Building CXX object Examples/CMakeFiles/l_CompositeTransformUtil.dir/CompositeTransformUtil.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CompositeTransformUtil_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CompositeTransformUtil.dir/CompositeTransformUtil.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/CompositeTransformUtil.cxx [ 37%] Linking CXX shared library ../lib/libl_TextureRunLengthFeatures.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_TextureRunLengthFeatures.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_TextureRunLengthFeatures.so.2 -o ../lib/libl_TextureRunLengthFeatures.so.2.1.0 CMakeFiles/l_TextureRunLengthFeatures.dir/TextureRunLengthFeatures.cxx.o CMakeFiles/l_TextureRunLengthFeatures.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_TextureRunLengthFeatures.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_TextureRunLengthFeatures.so.2.1.0 ../lib/libl_TextureRunLengthFeatures.so.2 ../lib/libl_TextureRunLengthFeatures.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 37%] Built target l_TextureRunLengthFeatures make -f Examples/CMakeFiles/l_SetOrigin.dir/build.make Examples/CMakeFiles/l_SetOrigin.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_SetOrigin.dir/DependInfo.cmake --color= Scanning dependencies of target l_SetOrigin make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_SetOrigin.dir/build.make Examples/CMakeFiles/l_SetOrigin.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 37%] Building CXX object Examples/CMakeFiles/l_SetOrigin.dir/SetOrigin.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SetOrigin_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SetOrigin.dir/SetOrigin.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/SetOrigin.cxx [ 37%] Building CXX object Examples/CMakeFiles/l_ResetDirection.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ResetDirection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ResetDirection.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 37%] Linking CXX shared library ../lib/libl_ExtractRegionFromImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ExtractRegionFromImage.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ExtractRegionFromImage.so.2 -o ../lib/libl_ExtractRegionFromImage.so.2.1.0 CMakeFiles/l_ExtractRegionFromImage.dir/ExtractRegionFromImage.cxx.o CMakeFiles/l_ExtractRegionFromImage.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ExtractRegionFromImage.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ExtractRegionFromImage.so.2.1.0 ../lib/libl_ExtractRegionFromImage.so.2 ../lib/libl_ExtractRegionFromImage.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 37%] Built target l_ExtractRegionFromImage make -f Examples/CMakeFiles/AverageTensorImages.dir/build.make Examples/CMakeFiles/AverageTensorImages.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/AverageTensorImages.dir/DependInfo.cmake --color= Scanning dependencies of target AverageTensorImages make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/AverageTensorImages.dir/build.make Examples/CMakeFiles/AverageTensorImages.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 37%] Building CXX object Examples/CMakeFiles/AverageTensorImages.dir/cli_AverageTensorImages.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/AverageTensorImages.dir/cli_AverageTensorImages.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_AverageTensorImages.cxx [ 38%] Linking CXX executable ../bin/AverageTensorImages cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/AverageTensorImages.dir/link.txt --verbose=1 [ 38%] Building CXX object Examples/CMakeFiles/l_ImageIntensityStatistics.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageIntensityStatistics_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageIntensityStatistics.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/AverageTensorImages.dir/cli_AverageTensorImages.cxx.o -o ../bin/AverageTensorImages -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_AverageTensorImages.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 38%] Built target AverageTensorImages make -f Examples/CMakeFiles/l_antsApplyTransforms.dir/build.make Examples/CMakeFiles/l_antsApplyTransforms.dir/depend [ 38%] Linking CXX shared library ../lib/libl_MeasureMinMaxMean.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_MeasureMinMaxMean.dir/link.txt --verbose=1 make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_antsApplyTransforms.dir/DependInfo.cmake --color= /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_MeasureMinMaxMean.so.2 -o ../lib/libl_MeasureMinMaxMean.so.2.1.0 CMakeFiles/l_MeasureMinMaxMean.dir/MeasureMinMaxMean.cxx.o CMakeFiles/l_MeasureMinMaxMean.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_MeasureMinMaxMean.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_MeasureMinMaxMean.so.2.1.0 ../lib/libl_MeasureMinMaxMean.so.2 ../lib/libl_MeasureMinMaxMean.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 38%] Built target l_MeasureMinMaxMean make -f Examples/CMakeFiles/l_ResampleImage.dir/build.make Examples/CMakeFiles/l_ResampleImage.dir/depend Scanning dependencies of target l_antsApplyTransforms make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_antsApplyTransforms.dir/build.make Examples/CMakeFiles/l_antsApplyTransforms.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ResampleImage.dir/DependInfo.cmake --color= [ 39%] Building CXX object Examples/CMakeFiles/l_antsApplyTransforms.dir/antsApplyTransforms.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsApplyTransforms_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsApplyTransforms.dir/antsApplyTransforms.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsApplyTransforms.cxx Scanning dependencies of target l_ResampleImage make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ResampleImage.dir/build.make Examples/CMakeFiles/l_ResampleImage.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 40%] Building CXX object Examples/CMakeFiles/l_ResampleImage.dir/ResampleImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ResampleImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ResampleImage.dir/ResampleImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ResampleImage.cxx [ 41%] Building CXX object Examples/CMakeFiles/l_SetOrigin.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SetOrigin_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SetOrigin.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 41%] Building CXX object Examples/CMakeFiles/l_ImageIntensityStatistics.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ImageIntensityStatistics_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ImageIntensityStatistics.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 41%] Building CXX object Examples/CMakeFiles/l_ResetDirection.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ResetDirection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ResetDirection.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 41%] Building CXX object Examples/CMakeFiles/l_CompositeTransformUtil.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CompositeTransformUtil_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CompositeTransformUtil.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 41%] Building CXX object Examples/CMakeFiles/l_SetOrigin.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SetOrigin_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SetOrigin.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 41%] Linking CXX shared library ../lib/libl_ResetDirection.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ResetDirection.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ResetDirection.so.2 -o ../lib/libl_ResetDirection.so.2.1.0 CMakeFiles/l_ResetDirection.dir/ResetDirection.cxx.o CMakeFiles/l_ResetDirection.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ResetDirection.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ResetDirection.so.2.1.0 ../lib/libl_ResetDirection.so.2 ../lib/libl_ResetDirection.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 41%] Built target l_ResetDirection make -f Examples/CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/build.make Examples/CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/DependInfo.cmake --color= Scanning dependencies of target l_WarpTimeSeriesImageMultiTransform make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/build.make Examples/CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 42%] Building CXX object Examples/CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/WarpTimeSeriesImageMultiTransform.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_WarpTimeSeriesImageMultiTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/WarpTimeSeriesImageMultiTransform.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTimeSeriesImageMultiTransform.cxx [ 42%] Linking CXX shared library ../lib/libl_SetOrigin.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_SetOrigin.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_SetOrigin.so.2 -o ../lib/libl_SetOrigin.so.2.1.0 CMakeFiles/l_SetOrigin.dir/SetOrigin.cxx.o CMakeFiles/l_SetOrigin.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_SetOrigin.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_SetOrigin.so.2.1.0 ../lib/libl_SetOrigin.so.2 ../lib/libl_SetOrigin.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 42%] Built target l_SetOrigin make -f Examples/CMakeFiles/l_PasteImageIntoImage.dir/build.make Examples/CMakeFiles/l_PasteImageIntoImage.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_PasteImageIntoImage.dir/DependInfo.cmake --color= Scanning dependencies of target l_PasteImageIntoImage make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_PasteImageIntoImage.dir/build.make Examples/CMakeFiles/l_PasteImageIntoImage.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 42%] Building CXX object Examples/CMakeFiles/l_PasteImageIntoImage.dir/PasteImageIntoImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_PasteImageIntoImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_PasteImageIntoImage.dir/PasteImageIntoImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/PasteImageIntoImage.cxx [ 42%] Building CXX object Examples/CMakeFiles/l_CompositeTransformUtil.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CompositeTransformUtil_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CompositeTransformUtil.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.h:335:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTimeSeriesImageMultiTransform.cxx:11: /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:529:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiInverseAffineOnlySinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.h:489:73: required from 'void ants::GetLargestSizeAfterWarp(typename WarperType::Pointer&, typename ImageType::Pointer&, typename ImageType::SizeType&, typename ImageType::PointType&) [with WarperType = itk::WarpImageMultiTransformFilter, itk::Image, itk::Image, 2>, itk::MatrixOffsetTransformBase >; ImageType = itk::VectorImage; typename WarperType::Pointer = itk::SmartPointer, itk::Image, itk::Image, 2>, itk::MatrixOffsetTransformBase > >; typename ImageType::Pointer = itk::SmartPointer >; typename ImageType::SizeType = itk::Size<2>; typename ImageType::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTimeSeriesImageMultiTransform.cxx:614:61: required from 'void ants::WarpImageMultiTransform(char*, char*, TRAN_OPT_QUEUE&, MISC_OPT&) [with int ImageDimension = 2; TRAN_OPT_QUEUE = std::vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTimeSeriesImageMultiTransform.cxx:774:101: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:529:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiInverseAffineOnlySinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/antsUtilities.h:489:73: required from 'void ants::GetLargestSizeAfterWarp(typename WarperType::Pointer&, typename ImageType::Pointer&, typename ImageType::SizeType&, typename ImageType::PointType&) [with WarperType = itk::WarpImageMultiTransformFilter, itk::Image, itk::Image, 3>, itk::MatrixOffsetTransformBase >; ImageType = itk::VectorImage; typename WarperType::Pointer = itk::SmartPointer, itk::Image, itk::Image, 3>, itk::MatrixOffsetTransformBase > >; typename ImageType::Pointer = itk::SmartPointer >; typename ImageType::SizeType = itk::Size<3>; typename ImageType::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTimeSeriesImageMultiTransform.cxx:614:61: required from 'void ants::WarpImageMultiTransform(char*, char*, TRAN_OPT_QUEUE&, MISC_OPT&) [with int ImageDimension = 3; TRAN_OPT_QUEUE = std::vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/WarpTimeSeriesImageMultiTransform.cxx:779:101: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] [ 42%] Building CXX object Examples/CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_WarpTimeSeriesImageMultiTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 42%] Linking CXX shared library ../lib/libl_ImageIntensityStatistics.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ImageIntensityStatistics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ImageIntensityStatistics.so.2 -o ../lib/libl_ImageIntensityStatistics.so.2.1.0 CMakeFiles/l_ImageIntensityStatistics.dir/ImageIntensityStatistics.cxx.o CMakeFiles/l_ImageIntensityStatistics.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ImageIntensityStatistics.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 42%] Linking CXX shared library ../lib/libl_CompositeTransformUtil.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_CompositeTransformUtil.dir/link.txt --verbose=1 cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ImageIntensityStatistics.so.2.1.0 ../lib/libl_ImageIntensityStatistics.so.2 ../lib/libl_ImageIntensityStatistics.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 42%] Built target l_ImageIntensityStatistics make -f Examples/CMakeFiles/l_ANTS.dir/build.make Examples/CMakeFiles/l_ANTS.dir/depend /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_CompositeTransformUtil.so.2 -o ../lib/libl_CompositeTransformUtil.so.2.1.0 CMakeFiles/l_CompositeTransformUtil.dir/CompositeTransformUtil.cxx.o CMakeFiles/l_CompositeTransformUtil.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_CompositeTransformUtil.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ANTS.dir/DependInfo.cmake --color= cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_CompositeTransformUtil.so.2.1.0 ../lib/libl_CompositeTransformUtil.so.2 ../lib/libl_CompositeTransformUtil.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 42%] Built target l_CompositeTransformUtil make -f Examples/CMakeFiles/l_simpleSynRegistration.dir/build.make Examples/CMakeFiles/l_simpleSynRegistration.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_simpleSynRegistration.dir/DependInfo.cmake --color= Scanning dependencies of target l_simpleSynRegistration make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_simpleSynRegistration.dir/build.make Examples/CMakeFiles/l_simpleSynRegistration.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 42%] Building CXX object Examples/CMakeFiles/l_simpleSynRegistration.dir/simpleSynRegistration.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_simpleSynRegistration_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_simpleSynRegistration.dir/simpleSynRegistration.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/simpleSynRegistration.cxx [ 42%] Building CXX object Examples/CMakeFiles/l_antsApplyTransforms.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsApplyTransforms_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsApplyTransforms.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx Scanning dependencies of target l_ANTS make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ANTS.dir/build.make Examples/CMakeFiles/l_ANTS.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 42%] Building CXX object Examples/CMakeFiles/l_ANTS.dir/ANTS.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTS_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTS.dir/ANTS.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx [ 42%] Building CXX object Examples/CMakeFiles/l_antsApplyTransforms.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsApplyTransforms_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsApplyTransforms.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h: In instantiation of 'itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer itk::ANTSImageRegistrationOptimizer::ExpandField(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, typename itk::ANTSImageRegistrationOptimizer::ImageType::SpacingType) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 3> >; typename itk::ANTSImageRegistrationOptimizer::ImageType::SpacingType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1365:34: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:390:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int idim = 0; idim < ImageDimension; idim++ ) ~~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:2191:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx: In instantiation of 'void itk::ANTSImageRegistrationOptimizer::DiReCTUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1374:21: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:2103:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int jj = 0; jj < ImageDimension; jj++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx: In instantiation of 'void itk::ANTSImageRegistrationOptimizer::UpdateTimeVaryingVelocityFieldWithSyNFandSyNM() [with unsigned int TDimension = 3; TReal = float]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1393:19: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:1857:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int jj = 0; jj < ImageDimension; jj++ ) ~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:2191:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx: In instantiation of 'void itk::ANTSImageRegistrationOptimizer::ComposeDiffs(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, TReal) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 3> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1637:15: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:497:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int jj = 0; jj < ImageDimension; jj++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:510:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int jj = 0; jj < ImageDimension; jj++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:516:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int jj = 0; jj < ImageDimension; jj++ ) ~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h: In instantiation of 'itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer itk::ANTSImageRegistrationOptimizer::ExpandField(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, typename itk::ANTSImageRegistrationOptimizer::ImageType::SpacingType) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 2> >; typename itk::ANTSImageRegistrationOptimizer::ImageType::SpacingType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1365:34: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:330:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:390:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int idim = 0; idim < ImageDimension; idim++ ) ~~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:2191:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx: In instantiation of 'void itk::ANTSImageRegistrationOptimizer::DiReCTUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1374:21: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:330:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:2103:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int jj = 0; jj < ImageDimension; jj++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx: In instantiation of 'void itk::ANTSImageRegistrationOptimizer::UpdateTimeVaryingVelocityFieldWithSyNFandSyNM() [with unsigned int TDimension = 2; TReal = float]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1393:19: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:330:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:1857:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int jj = 0; jj < ImageDimension; jj++ ) ~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:2191:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx: In instantiation of 'void itk::ANTSImageRegistrationOptimizer::ComposeDiffs(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, TReal) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 2> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1637:15: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:330:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:497:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int jj = 0; jj < ImageDimension; jj++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:510:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int jj = 0; jj < ImageDimension; jj++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:516:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int jj = 0; jj < ImageDimension; jj++ ) ~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageTransformation.cxx:26:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageTransformation.h:196, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:24, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/ANTS_affine_registration2.h: In instantiation of 'void ComputeSingleAffineTransform2D3D(typename ImageType::Pointer&, typename ImageType::Pointer&, OptAffineType&, typename TransformType::Pointer&) [with ImageType = itk::Image; TransformType = itk::ANTSCenteredAffine2DTransform; OptAffineType = OptAffine, itk::Image >; typename ImageType::Pointer = itk::SmartPointer >; typename TransformType::Pointer = itk::SmartPointer >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/ANTS_affine_registration2.h:600:7: required from 'void ComputeSingleAffineTransform(typename ImageType::Pointer&, typename ImageType::Pointer&, OptAffineType&, typename TransformType::Pointer&) [with ImageType = itk::Image; TransformType = itk::MatrixOffsetTransformBase; OptAffineType = OptAffine, itk::Image >; typename ImageType::Pointer = itk::SmartPointer >; typename TransformType::Pointer = itk::SmartPointer >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:1656:72: required from 'itk::ANTSImageRegistrationOptimizer::AffineTransformPointer itk::ANTSImageRegistrationOptimizer::AffineOptimization(itk::ANTSImageRegistrationOptimizer::OptAffineType&) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::AffineTransformPointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::OptAffineType = OptAffine, itk::Image >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:284:9: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/ANTS_affine_registration2.h:543:74: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = TransformType::ParametersDimension - ImageDimension; i < TransformType::ParametersDimension; i++ ) ~~^~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/ANTS_affine_registration2.h: In instantiation of 'void ComputeSingleAffineTransform2D3D(typename ImageType::Pointer&, typename ImageType::Pointer&, OptAffineType&, typename TransformType::Pointer&) [with ImageType = itk::Image; TransformType = itk::ANTSAffine3DTransform; OptAffineType = OptAffine, itk::Image >; typename ImageType::Pointer = itk::SmartPointer >; typename TransformType::Pointer = itk::SmartPointer >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/ANTS_affine_registration2.h:621:7: required from 'void ComputeSingleAffineTransform(typename ImageType::Pointer&, typename ImageType::Pointer&, OptAffineType&, typename TransformType::Pointer&) [with ImageType = itk::Image; TransformType = itk::MatrixOffsetTransformBase; OptAffineType = OptAffine, itk::Image >; typename ImageType::Pointer = itk::SmartPointer >; typename TransformType::Pointer = itk::SmartPointer >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:1656:72: required from 'itk::ANTSImageRegistrationOptimizer::AffineTransformPointer itk::ANTSImageRegistrationOptimizer::AffineOptimization(itk::ANTSImageRegistrationOptimizer::OptAffineType&) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::AffineTransformPointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::OptAffineType = OptAffine, itk::Image >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:284:9: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/ANTS_affine_registration2.h:543:74: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h: In instantiation of 'itk::ANTSImageRegistrationOptimizer::TimeVaryingVelocityFieldPointer itk::ANTSImageRegistrationOptimizer::ExpandVelocity() [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::TimeVaryingVelocityFieldPointer = itk::SmartPointer, 4> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1131:15: required from 'void itk::ANTSImageRegistrationOptimizer::ComputeMultiResolutionParameters(itk::ANTSImageRegistrationOptimizer::ImagePointer) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1311:13: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:361:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int idim = 0; idim < ImageDimension; idim++ ) ~~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:2191:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx: In instantiation of 'void itk::ANTSImageRegistrationOptimizer::SmoothVelocityGauss(itk::ANTSImageRegistrationOptimizer::TimeVaryingVelocityFieldPointer, TReal, unsigned int) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::TimeVaryingVelocityFieldPointer = itk::SmartPointer, 4> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:2304:9: required from 'void itk::ANTSImageRegistrationOptimizer::DiReCTUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1374:21: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:331:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h: In instantiation of 'TReal itk::ANTSImageRegistrationOptimizer::InvertField(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, TReal, TReal, int, bool) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 3> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:1738:9: required from 'void itk::ANTSImageRegistrationOptimizer::SyNRegistrationUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1386:21: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1837:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) // only use in-plane spacing ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1901:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h: In instantiation of 'TReal itk::ANTSImageRegistrationOptimizer::MeasureDeformation(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, int) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 3> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:1554:24: required from 'void itk::ANTSImageRegistrationOptimizer::DiffeomorphicExpRegistrationUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1401:19: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:2043:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:2058:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int tt = 0; tt < ImageDimension; tt++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h: In instantiation of 'itk::ANTSImageRegistrationOptimizer::TimeVaryingVelocityFieldPointer itk::ANTSImageRegistrationOptimizer::ExpandVelocity() [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::TimeVaryingVelocityFieldPointer = itk::SmartPointer, 3> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1131:15: required from 'void itk::ANTSImageRegistrationOptimizer::ComputeMultiResolutionParameters(itk::ANTSImageRegistrationOptimizer::ImagePointer) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1311:13: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:330:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:361:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int idim = 0; idim < ImageDimension; idim++ ) ~~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:2191:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx: In instantiation of 'void itk::ANTSImageRegistrationOptimizer::SmoothVelocityGauss(itk::ANTSImageRegistrationOptimizer::TimeVaryingVelocityFieldPointer, TReal, unsigned int) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::TimeVaryingVelocityFieldPointer = itk::SmartPointer, 3> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:2304:9: required from 'void itk::ANTSImageRegistrationOptimizer::DiReCTUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1374:21: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:330:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:331:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h: In instantiation of 'TReal itk::ANTSImageRegistrationOptimizer::InvertField(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, TReal, TReal, int, bool) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 2> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:1738:9: required from 'void itk::ANTSImageRegistrationOptimizer::SyNRegistrationUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1386:21: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:330:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1837:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) // only use in-plane spacing ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1901:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h: In instantiation of 'TReal itk::ANTSImageRegistrationOptimizer::MeasureDeformation(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, int) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 2> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:1554:24: required from 'void itk::ANTSImageRegistrationOptimizer::DiffeomorphicExpRegistrationUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1401:19: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:330:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:2043:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:2058:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int tt = 0; tt < ImageDimension; tt++ ) ~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:2191:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx: In instantiation of 'void itk::ANTSImageRegistrationOptimizer::SmoothDisplacementFieldGauss(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, TReal, bool, unsigned int) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 3> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:332:13: required from 'void itk::ANTSImageRegistrationOptimizer::SmoothDisplacementField(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, bool) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 3> >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1762:11: required from 'void itk::ANTSImageRegistrationOptimizer::ElasticRegistrationUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1358:19: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:230:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ [ 42%] Building CXX object Examples/CMakeFiles/l_PasteImageIntoImage.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_PasteImageIntoImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_PasteImageIntoImage.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx: In instantiation of 'void itk::ANTSImageRegistrationOptimizer::SmoothDisplacementFieldGauss(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, TReal, bool, unsigned int) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 2> >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:332:13: required from 'void itk::ANTSImageRegistrationOptimizer::SmoothDisplacementField(itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, bool) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 2> >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1762:11: required from 'void itk::ANTSImageRegistrationOptimizer::ElasticRegistrationUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1358:19: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:330:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:230:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.h:335:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:45, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:25, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:605:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiTransformPoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&, bool, const IndexType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point; itk::WarpImageMultiTransformFilter::IndexType = itk::Index<3>]' /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:431:38: required from 'bool itk::WarpImageMultiTransformFilter::MultiTransformSinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:586:24: required from 'itk::ANTSImageRegistrationOptimizer::PointSetPointer itk::ANTSImageRegistrationOptimizer::WarpMultiTransform(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::AffineTransformPointer, itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, bool, itk::ANTSImageRegistrationOptimizer::AffineTransformPointer) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::AffineTransformPointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 3> >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:2276:16: required from 'void itk::ANTSImageRegistrationOptimizer::DiReCTUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer) [with unsigned int TDimension = 3; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1374:21: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 3; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 3]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:326:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:605:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiTransformPoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&, bool, const IndexType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point; itk::WarpImageMultiTransformFilter::IndexType = itk::Index<2>]' /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:431:38: required from 'bool itk::WarpImageMultiTransformFilter::MultiTransformSinglePoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:586:24: required from 'itk::ANTSImageRegistrationOptimizer::PointSetPointer itk::ANTSImageRegistrationOptimizer::WarpMultiTransform(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::AffineTransformPointer, itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer, bool, itk::ANTSImageRegistrationOptimizer::AffineTransformPointer) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::AffineTransformPointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::DisplacementFieldPointer = itk::SmartPointer, 2> >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.cxx:2276:16: required from 'void itk::ANTSImageRegistrationOptimizer::DiReCTUpdate(itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::ImagePointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer, itk::ANTSImageRegistrationOptimizer::PointSetPointer) [with unsigned int TDimension = 2; TReal = float; itk::ANTSImageRegistrationOptimizer::ImagePointer = itk::SmartPointer >; itk::ANTSImageRegistrationOptimizer::PointSetPointer = itk::SmartPointer > >]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkANTSImageRegistrationOptimizer.h:1374:21: required from 'void itk::ANTSImageRegistrationOptimizer::DeformableOptimization() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:310:3: required from 'void itk::PICSLAdvancedNormalizationToolKit::RunRegistration() [with unsigned int TDimension = 2; TReal = float]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:94:5: required from 'int ants::ANTSex(int, char**) [with unsigned int ImageDimension = 2]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:330:44: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] [ 43%] Building CXX object Examples/CMakeFiles/l_simpleSynRegistration.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_simpleSynRegistration_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_simpleSynRegistration.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.h:410:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:40, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx: In instantiation of 'void itk::ProbabilisticRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx:168:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:413:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:41, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'void itk::CrossCorrelationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:171:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:804:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:28, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.cxx: In instantiation of 'void itk::SpatialMutualInformationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.cxx:339:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:28:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h: In instantiation of 'itk::SpatialMutualInformationRegistrationFunction::VectorType itk::SpatialMutualInformationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::SpatialMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::SpatialMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::SpatialMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:599:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h: In instantiation of 'itk::SpatialMutualInformationRegistrationFunction::VectorType itk::SpatialMutualInformationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::SpatialMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::SpatialMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::SpatialMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:500:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:797:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:38, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx: In instantiation of 'void itk::AvantsMutualInformationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx:312:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:38:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:623:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:533:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.h:410:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:40, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx: In instantiation of 'void itk::ProbabilisticRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx:168:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:413:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:41, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'void itk::CrossCorrelationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:171:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:804:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:28, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.cxx: In instantiation of 'void itk::SpatialMutualInformationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.cxx:339:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:28:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h: In instantiation of 'itk::SpatialMutualInformationRegistrationFunction::VectorType itk::SpatialMutualInformationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::SpatialMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::SpatialMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::SpatialMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:599:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h: In instantiation of 'itk::SpatialMutualInformationRegistrationFunction::VectorType itk::SpatialMutualInformationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::SpatialMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::SpatialMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::SpatialMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkSpatialMutualInformationRegistrationFunction.h:500:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:797:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:38, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx: In instantiation of 'void itk::AvantsMutualInformationRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.cxx:312:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:38:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:623:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h: In instantiation of 'itk::AvantsMutualInformationRegistrationFunction::VectorType itk::AvantsMutualInformationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::AvantsMutualInformationRegistrationFunction::VectorType = itk::Vector; itk::AvantsMutualInformationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::AvantsMutualInformationRegistrationFunction::FloatOffsetType = itk::Vector]': /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkAvantsMutualInformationRegistrationFunction.h:533:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int imd = 0; imd < ImageDimension; imd++ ) ~~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.h:410:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:40, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::ProbabilisticRegistrationFunction::ComputeMetricAtPairB(itk::ProbabilisticRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; typename TDisplacementField::PixelType = itk::Vector; itk::ProbabilisticRegistrationFunction::IndexType = itk::Index<2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.h:291:20: required from 'itk::ProbabilisticRegistrationFunction::VectorType itk::ProbabilisticRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::ProbabilisticRegistrationFunction::VectorType = itk::Vector; itk::ProbabilisticRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::ProbabilisticRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx:848:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::ProbabilisticRegistrationFunction::ComputeMetricAtPairC(itk::ProbabilisticRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; typename TDisplacementField::PixelType = itk::Vector; itk::ProbabilisticRegistrationFunction::IndexType = itk::Index<2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.h:309:20: required from 'itk::ProbabilisticRegistrationFunction::VectorType itk::ProbabilisticRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::ProbabilisticRegistrationFunction::VectorType = itk::Vector; itk::ProbabilisticRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::ProbabilisticRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx:923:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:413:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:41, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairB(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:296:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:429:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairC(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<2>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:314:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 2>, itk::ZeroFluxNeumannBoundaryCondition, 2>, itk::Image, 2> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:492:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.h:338:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:42, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.hxx: In instantiation of 'void itk::ExpectationBasedPointSetRegistrationFunction::FastExpectationLandmarkField(float, bool, long int, bool) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; TPointSet = itk::PointSet >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.hxx:471:11: required from 'void itk::ExpectationBasedPointSetRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 2>; TPointSet = itk::PointSet >]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.hxx:686:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.hxx:732:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.hxx:746:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.h:410:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:40, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::ProbabilisticRegistrationFunction::ComputeMetricAtPairB(itk::ProbabilisticRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; typename TDisplacementField::PixelType = itk::Vector; itk::ProbabilisticRegistrationFunction::IndexType = itk::Index<3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.h:291:20: required from 'itk::ProbabilisticRegistrationFunction::VectorType itk::ProbabilisticRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::ProbabilisticRegistrationFunction::VectorType = itk::Vector; itk::ProbabilisticRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::ProbabilisticRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx:848:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::ProbabilisticRegistrationFunction::ComputeMetricAtPairC(itk::ProbabilisticRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; typename TDisplacementField::PixelType = itk::Vector; itk::ProbabilisticRegistrationFunction::IndexType = itk::Index<3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.h:309:20: required from 'itk::ProbabilisticRegistrationFunction::VectorType itk::ProbabilisticRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::ProbabilisticRegistrationFunction::VectorType = itk::Vector; itk::ProbabilisticRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::ProbabilisticRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkProbabilisticRegistrationFunction.cxx:923:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:413:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:41, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairB(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:296:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:429:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx: In instantiation of 'typename TDisplacementField::PixelType itk::CrossCorrelationRegistrationFunction::ComputeMetricAtPairC(itk::CrossCorrelationRegistrationFunction::IndexType, typename TDisplacementField::PixelType) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; typename TDisplacementField::PixelType = itk::Vector; itk::CrossCorrelationRegistrationFunction::IndexType = itk::Index<3>]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.h:314:20: required from 'itk::CrossCorrelationRegistrationFunction::VectorType itk::CrossCorrelationRegistrationFunction::ComputeUpdateInv(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; itk::CrossCorrelationRegistrationFunction::VectorType = itk::Vector; itk::CrossCorrelationRegistrationFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::CrossCorrelationRegistrationFunction::FloatOffsetType = itk::Vector]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkCrossCorrelationRegistrationFunction.cxx:492:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int qq = 0; qq < ImageDimension; qq++ ) ~~~^~~~~~~~~~~~~~~~ [ 43%] Building CXX object Examples/CMakeFiles/l_PasteImageIntoImage.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_PasteImageIntoImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_PasteImageIntoImage.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.h:338:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.hxx:42, from /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkPICSLAdvancedNormalizationToolKit.h:136, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:22: /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.hxx: In instantiation of 'void itk::ExpectationBasedPointSetRegistrationFunction::FastExpectationLandmarkField(float, bool, long int, bool) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; TPointSet = itk::PointSet >]': /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.hxx:471:11: required from 'void itk::ExpectationBasedPointSetRegistrationFunction::InitializeIteration() [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDisplacementField = itk::Image, 3>; TPointSet = itk::PointSet >]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTS.cxx:350:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.hxx:686:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.hxx:732:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration/itkExpectationBasedPointSetRegistrationFunction.hxx:746:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int j = 0; j < ImageDimension; j++ ) ~~^~~~~~~~~~~~~~~~ [ 43%] Building CXX object Examples/CMakeFiles/l_simpleSynRegistration.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_simpleSynRegistration_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_simpleSynRegistration.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 43%] Linking CXX shared library ../lib/libl_antsAffineInitializer.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_antsAffineInitializer.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_antsAffineInitializer.so.2 -o ../lib/libl_antsAffineInitializer.so.2.1.0 CMakeFiles/l_antsAffineInitializer.dir/antsAffineInitializer.cxx.o CMakeFiles/l_antsAffineInitializer.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_antsAffineInitializer.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_antsAffineInitializer.so.2.1.0 ../lib/libl_antsAffineInitializer.so.2 ../lib/libl_antsAffineInitializer.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 43%] Built target l_antsAffineInitializer make -f Examples/CMakeFiles/ResampleImageBySpacing.dir/build.make Examples/CMakeFiles/ResampleImageBySpacing.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/ResampleImageBySpacing.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleImageBySpacing make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/ResampleImageBySpacing.dir/build.make Examples/CMakeFiles/ResampleImageBySpacing.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 43%] Building CXX object Examples/CMakeFiles/ResampleImageBySpacing.dir/cli_ResampleImageBySpacing.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/ResampleImageBySpacing.dir/cli_ResampleImageBySpacing.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_ResampleImageBySpacing.cxx [ 44%] Linking CXX shared library ../lib/libl_PasteImageIntoImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_PasteImageIntoImage.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_PasteImageIntoImage.so.2 -o ../lib/libl_PasteImageIntoImage.so.2.1.0 CMakeFiles/l_PasteImageIntoImage.dir/PasteImageIntoImage.cxx.o CMakeFiles/l_PasteImageIntoImage.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_PasteImageIntoImage.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 44%] Linking CXX executable ../bin/ResampleImageBySpacing cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleImageBySpacing.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleImageBySpacing.dir/cli_ResampleImageBySpacing.cxx.o -o ../bin/ResampleImageBySpacing -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_ResampleImageBySpacing.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_PasteImageIntoImage.so.2.1.0 ../lib/libl_PasteImageIntoImage.so.2 ../lib/libl_PasteImageIntoImage.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 44%] Building CXX object Examples/CMakeFiles/l_ResampleImage.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ResampleImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ResampleImage.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 44%] Built target ResampleImageBySpacing [ 44%] Building CXX object Examples/CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_WarpTimeSeriesImageMultiTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 44%] Built target l_PasteImageIntoImage [ 44%] Building CXX object Examples/CMakeFiles/l_ANTS.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTS_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTS.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 44%] Building CXX object Examples/CMakeFiles/l_ResampleImage.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ResampleImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ResampleImage.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make -f Examples/CMakeFiles/l_StackSlices.dir/build.make Examples/CMakeFiles/l_StackSlices.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_StackSlices.dir/DependInfo.cmake --color= [ 44%] Building CXX object Examples/CMakeFiles/l_ANTS.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTS_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTS.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make -f Examples/CMakeFiles/ImageCompare.dir/build.make Examples/CMakeFiles/ImageCompare.dir/depend Scanning dependencies of target l_StackSlices make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_StackSlices.dir/build.make Examples/CMakeFiles/l_StackSlices.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/ImageCompare.dir/DependInfo.cmake --color= [ 44%] Building CXX object Examples/CMakeFiles/l_StackSlices.dir/StackSlices.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_StackSlices_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_StackSlices.dir/StackSlices.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/StackSlices.cxx Scanning dependencies of target ImageCompare make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/ImageCompare.dir/build.make Examples/CMakeFiles/ImageCompare.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 44%] Building CXX object Examples/CMakeFiles/ImageCompare.dir/cli_ImageCompare.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/ImageCompare.dir/cli_ImageCompare.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_ImageCompare.cxx [ 44%] Linking CXX executable ../bin/ImageCompare cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageCompare.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageCompare.dir/cli_ImageCompare.cxx.o -o ../bin/ImageCompare -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_ImageCompare.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 44%] Linking CXX shared library ../lib/libl_ResampleImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ResampleImage.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ResampleImage.so.2 -o ../lib/libl_ResampleImage.so.2.1.0 CMakeFiles/l_ResampleImage.dir/ResampleImage.cxx.o CMakeFiles/l_ResampleImage.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ResampleImage.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 44%] Built target ImageCompare [ 45%] Building CXX object Examples/CMakeFiles/l_StackSlices.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_StackSlices_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_StackSlices.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ResampleImage.so.2.1.0 ../lib/libl_ResampleImage.so.2 ../lib/libl_ResampleImage.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 45%] Built target l_ResampleImage make -f Examples/CMakeFiles/l_N4BiasFieldCorrection.dir/build.make Examples/CMakeFiles/l_N4BiasFieldCorrection.dir/depend make -f Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/build.make Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_N4BiasFieldCorrection.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/DependInfo.cmake --color= Scanning dependencies of target l_ANTSUseLandmarkImagesToGetAffineTransform make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/build.make Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 45%] Building CXX object Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/ANTSUseLandmarkImagesToGetAffineTransform.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSUseLandmarkImagesToGetAffineTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/ANTSUseLandmarkImagesToGetAffineTransform.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ANTSUseLandmarkImagesToGetAffineTransform.cxx Scanning dependencies of target l_N4BiasFieldCorrection make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_N4BiasFieldCorrection.dir/build.make Examples/CMakeFiles/l_N4BiasFieldCorrection.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 45%] Building CXX object Examples/CMakeFiles/l_N4BiasFieldCorrection.dir/N4BiasFieldCorrection.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_N4BiasFieldCorrection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_N4BiasFieldCorrection.dir/N4BiasFieldCorrection.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/N4BiasFieldCorrection.cxx [ 46%] Building CXX object Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSUseLandmarkImagesToGetAffineTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx make -f Examples/CMakeFiles/l_ANTSJacobian.dir/build.make Examples/CMakeFiles/l_ANTSJacobian.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ANTSJacobian.dir/DependInfo.cmake --color= Scanning dependencies of target l_ANTSJacobian make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ANTSJacobian.dir/build.make Examples/CMakeFiles/l_ANTSJacobian.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 46%] Building CXX object Examples/CMakeFiles/l_ANTSJacobian.dir/ANTSJacobian.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSJacobian_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSJacobian.dir/ANTSJacobian.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ANTSJacobian.cxx [ 46%] Linking CXX shared library ../lib/libl_WarpTimeSeriesImageMultiTransform.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_WarpTimeSeriesImageMultiTransform.so.2 -o ../lib/libl_WarpTimeSeriesImageMultiTransform.so.2.1.0 CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/WarpTimeSeriesImageMultiTransform.cxx.o CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_WarpTimeSeriesImageMultiTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.h:335:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/ANTSJacobian.cxx:23: /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:605:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiTransformPoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&, bool, const IndexType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point; itk::WarpImageMultiTransformFilter::IndexType = itk::Index<3>]' /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:351:40: required from 'void itk::WarpImageMultiTransformFilter::ThreadedGenerateData(const OutputImageRegionType&, itk::ThreadIdType) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::OutputImageRegionType = itk::ImageRegion<3>; itk::ThreadIdType = unsigned int]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTSJacobian.cxx:634:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:605:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiTransformPoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&, bool, const IndexType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point; itk::WarpImageMultiTransformFilter::IndexType = itk::Index<2>]' /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:351:40: required from 'void itk::WarpImageMultiTransformFilter::ThreadedGenerateData(const OutputImageRegionType&, itk::ThreadIdType) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::OutputImageRegionType = itk::ImageRegion<2>; itk::ThreadIdType = unsigned int]' /build/ants-8vuM8K/ants-2.1.0/Examples/ANTSJacobian.cxx:634:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_WarpTimeSeriesImageMultiTransform.so.2.1.0 ../lib/libl_WarpTimeSeriesImageMultiTransform.so.2 ../lib/libl_WarpTimeSeriesImageMultiTransform.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 46%] Built target l_WarpTimeSeriesImageMultiTransform [ 47%] Building CXX object Examples/CMakeFiles/l_N4BiasFieldCorrection.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_N4BiasFieldCorrection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_N4BiasFieldCorrection.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 47%] Building CXX object Examples/CMakeFiles/l_ANTSJacobian.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSJacobian_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSJacobian.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 47%] Building CXX object Examples/CMakeFiles/l_StackSlices.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_StackSlices_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_StackSlices.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 47%] Building CXX object Examples/CMakeFiles/l_ANTSJacobian.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSJacobian_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSJacobian.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 47%] Building CXX object Examples/CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSUseLandmarkImagesToGetAffineTransform_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make -f Examples/CMakeFiles/SmoothImage.dir/build.make Examples/CMakeFiles/SmoothImage.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/SmoothImage.dir/DependInfo.cmake --color= [ 47%] Linking CXX shared library ../lib/libl_StackSlices.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_StackSlices.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_StackSlices.so.2 -o ../lib/libl_StackSlices.so.2.1.0 CMakeFiles/l_StackSlices.dir/StackSlices.cxx.o CMakeFiles/l_StackSlices.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_StackSlices.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm Scanning dependencies of target SmoothImage make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/SmoothImage.dir/build.make Examples/CMakeFiles/SmoothImage.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 48%] Building CXX object Examples/CMakeFiles/SmoothImage.dir/cli_SmoothImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/SmoothImage.dir/cli_SmoothImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_SmoothImage.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_StackSlices.so.2.1.0 ../lib/libl_StackSlices.so.2 ../lib/libl_StackSlices.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 48%] Linking CXX executable ../bin/SmoothImage cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmoothImage.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SmoothImage.dir/cli_SmoothImage.cxx.o -o ../bin/SmoothImage -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_SmoothImage.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 48%] Built target l_StackSlices [ 48%] Building CXX object Examples/CMakeFiles/l_N4BiasFieldCorrection.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_N4BiasFieldCorrection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_N4BiasFieldCorrection.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 48%] Linking CXX shared library ../lib/libl_ANTSJacobian.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ANTSJacobian.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ANTSJacobian.so.2 -o ../lib/libl_ANTSJacobian.so.2.1.0 CMakeFiles/l_ANTSJacobian.dir/ANTSJacobian.cxx.o CMakeFiles/l_ANTSJacobian.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ANTSJacobian.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ANTSJacobian.so.2.1.0 ../lib/libl_ANTSJacobian.so.2 ../lib/libl_ANTSJacobian.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 48%] Built target l_ANTSJacobian make -f Examples/CMakeFiles/LaplacianThickness.dir/build.make Examples/CMakeFiles/LaplacianThickness.dir/depend [ 48%] Built target SmoothImage make -f Examples/CMakeFiles/ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/build.make Examples/CMakeFiles/ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/LaplacianThickness.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/DependInfo.cmake --color= Scanning dependencies of target LaplacianThickness make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/LaplacianThickness.dir/build.make Examples/CMakeFiles/LaplacianThickness.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 48%] Building CXX object Examples/CMakeFiles/LaplacianThickness.dir/cli_LaplacianThickness.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/LaplacianThickness.dir/cli_LaplacianThickness.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_LaplacianThickness.cxx Scanning dependencies of target ANTSUseLandmarkImagesToGetBSplineDisplacementField make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/build.make Examples/CMakeFiles/ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 48%] Building CXX object Examples/CMakeFiles/ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/cli_ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/cli_ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx [ 48%] Linking CXX executable ../bin/ANTSUseLandmarkImagesToGetBSplineDisplacementField cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/link.txt --verbose=1 [ 48%] Linking CXX executable ../bin/LaplacianThickness cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/LaplacianThickness.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ANTSUseLandmarkImagesToGetBSplineDisplacementField.dir/cli_ANTSUseLandmarkImagesToGetBSplineDisplacementField.cxx.o -o ../bin/ANTSUseLandmarkImagesToGetBSplineDisplacementField -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_ANTSUseLandmarkImagesToGetBSplineDisplacementField.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/LaplacianThickness.dir/cli_LaplacianThickness.cxx.o -o ../bin/LaplacianThickness -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_LaplacianThickness.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 48%] Built target LaplacianThickness make -f Examples/CMakeFiles/l_ConvertScalarImageToRGB.dir/build.make Examples/CMakeFiles/l_ConvertScalarImageToRGB.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ConvertScalarImageToRGB.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 48%] Built target ANTSUseLandmarkImagesToGetBSplineDisplacementField make -f Examples/CMakeFiles/TextureRunLengthFeatures.dir/build.make Examples/CMakeFiles/TextureRunLengthFeatures.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/TextureRunLengthFeatures.dir/DependInfo.cmake --color= Scanning dependencies of target TextureRunLengthFeatures make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/TextureRunLengthFeatures.dir/build.make Examples/CMakeFiles/TextureRunLengthFeatures.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 48%] Building CXX object Examples/CMakeFiles/TextureRunLengthFeatures.dir/cli_TextureRunLengthFeatures.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/TextureRunLengthFeatures.dir/cli_TextureRunLengthFeatures.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_TextureRunLengthFeatures.cxx make -f Examples/CMakeFiles/l_N3BiasFieldCorrection.dir/build.make Examples/CMakeFiles/l_N3BiasFieldCorrection.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_N3BiasFieldCorrection.dir/DependInfo.cmake --color= [ 48%] Linking CXX shared library ../lib/libl_ANTSUseLandmarkImagesToGetAffineTransform.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ANTSUseLandmarkImagesToGetAffineTransform.so.2 -o ../lib/libl_ANTSUseLandmarkImagesToGetAffineTransform.so.2.1.0 CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/ANTSUseLandmarkImagesToGetAffineTransform.cxx.o CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ANTSUseLandmarkImagesToGetAffineTransform.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm Scanning dependencies of target l_N3BiasFieldCorrection make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_N3BiasFieldCorrection.dir/build.make Examples/CMakeFiles/l_N3BiasFieldCorrection.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 49%] Building CXX object Examples/CMakeFiles/l_N3BiasFieldCorrection.dir/N3BiasFieldCorrection.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_N3BiasFieldCorrection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_N3BiasFieldCorrection.dir/N3BiasFieldCorrection.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/N3BiasFieldCorrection.cxx [ 50%] Linking CXX executable ../bin/TextureRunLengthFeatures cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/TextureRunLengthFeatures.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/TextureRunLengthFeatures.dir/cli_TextureRunLengthFeatures.cxx.o -o ../bin/TextureRunLengthFeatures -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_TextureRunLengthFeatures.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ANTSUseLandmarkImagesToGetAffineTransform.so.2.1.0 ../lib/libl_ANTSUseLandmarkImagesToGetAffineTransform.so.2 ../lib/libl_ANTSUseLandmarkImagesToGetAffineTransform.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 50%] Built target l_ANTSUseLandmarkImagesToGetAffineTransform make -f Examples/CMakeFiles/antsAffineInitializer.dir/build.make Examples/CMakeFiles/antsAffineInitializer.dir/depend [ 50%] Built target TextureRunLengthFeatures [ 50%] Building CXX object Examples/CMakeFiles/l_N3BiasFieldCorrection.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_N3BiasFieldCorrection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_N3BiasFieldCorrection.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/antsAffineInitializer.dir/DependInfo.cmake --color= Scanning dependencies of target l_ConvertScalarImageToRGB make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ConvertScalarImageToRGB.dir/build.make Examples/CMakeFiles/l_ConvertScalarImageToRGB.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 50%] Building CXX object Examples/CMakeFiles/l_ConvertScalarImageToRGB.dir/ConvertScalarImageToRGB.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertScalarImageToRGB_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertScalarImageToRGB.dir/ConvertScalarImageToRGB.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ConvertScalarImageToRGB.cxx Scanning dependencies of target antsAffineInitializer make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/antsAffineInitializer.dir/build.make Examples/CMakeFiles/antsAffineInitializer.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 50%] Building CXX object Examples/CMakeFiles/antsAffineInitializer.dir/cli_antsAffineInitializer.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/antsAffineInitializer.dir/cli_antsAffineInitializer.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_antsAffineInitializer.cxx [ 51%] Linking CXX executable ../bin/antsAffineInitializer cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/antsAffineInitializer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/antsAffineInitializer.dir/cli_antsAffineInitializer.cxx.o -o ../bin/antsAffineInitializer -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_antsAffineInitializer.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 51%] Built target antsAffineInitializer make -f Examples/CMakeFiles/ResampleImage.dir/build.make Examples/CMakeFiles/ResampleImage.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/ResampleImage.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleImage make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/ResampleImage.dir/build.make Examples/CMakeFiles/ResampleImage.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 52%] Building CXX object Examples/CMakeFiles/ResampleImage.dir/cli_ResampleImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/ResampleImage.dir/cli_ResampleImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_ResampleImage.cxx [ 52%] Linking CXX executable ../bin/ResampleImage cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleImage.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleImage.dir/cli_ResampleImage.cxx.o -o ../bin/ResampleImage -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_ResampleImage.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 52%] Built target ResampleImage make -f Examples/CMakeFiles/l_ExtractRegionFromImageByMask.dir/build.make Examples/CMakeFiles/l_ExtractRegionFromImageByMask.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ExtractRegionFromImageByMask.dir/DependInfo.cmake --color= Scanning dependencies of target l_ExtractRegionFromImageByMask make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ExtractRegionFromImageByMask.dir/build.make Examples/CMakeFiles/l_ExtractRegionFromImageByMask.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 52%] Building CXX object Examples/CMakeFiles/l_ExtractRegionFromImageByMask.dir/ExtractRegionFromImageByMask.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ExtractRegionFromImageByMask_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ExtractRegionFromImageByMask.dir/ExtractRegionFromImageByMask.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ExtractRegionFromImageByMask.cxx [ 52%] Building CXX object Examples/CMakeFiles/l_N3BiasFieldCorrection.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_N3BiasFieldCorrection_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_N3BiasFieldCorrection.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make -f Examples/CMakeFiles/l_CreateJacobianDeterminantImage.dir/build.make Examples/CMakeFiles/l_CreateJacobianDeterminantImage.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_CreateJacobianDeterminantImage.dir/DependInfo.cmake --color= Scanning dependencies of target l_CreateJacobianDeterminantImage make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_CreateJacobianDeterminantImage.dir/build.make Examples/CMakeFiles/l_CreateJacobianDeterminantImage.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 52%] Building CXX object Examples/CMakeFiles/l_CreateJacobianDeterminantImage.dir/CreateJacobianDeterminantImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateJacobianDeterminantImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateJacobianDeterminantImage.dir/CreateJacobianDeterminantImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/CreateJacobianDeterminantImage.cxx [ 52%] Building CXX object Examples/CMakeFiles/l_ConvertScalarImageToRGB.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertScalarImageToRGB_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertScalarImageToRGB.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 53%] Linking CXX shared library ../lib/libl_antsMotionCorr.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_antsMotionCorr.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_antsMotionCorr.so.2 -o ../lib/libl_antsMotionCorr.so.2.1.0 CMakeFiles/l_antsMotionCorr.dir/antsMotionCorr.cxx.o CMakeFiles/l_antsMotionCorr.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_antsMotionCorr.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_antsMotionCorr.so.2.1.0 ../lib/libl_antsMotionCorr.so.2 ../lib/libl_antsMotionCorr.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 53%] Built target l_antsMotionCorr make -f Examples/CMakeFiles/l_SurfaceCurvature.dir/build.make Examples/CMakeFiles/l_SurfaceCurvature.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_SurfaceCurvature.dir/DependInfo.cmake --color= Scanning dependencies of target l_SurfaceCurvature make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_SurfaceCurvature.dir/build.make Examples/CMakeFiles/l_SurfaceCurvature.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 53%] Building CXX object Examples/CMakeFiles/l_SurfaceCurvature.dir/SurfaceCurvature.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SurfaceCurvature_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SurfaceCurvature.dir/SurfaceCurvature.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/SurfaceCurvature.cxx [ 53%] Building CXX object Examples/CMakeFiles/l_ConvertScalarImageToRGB.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ConvertScalarImageToRGB_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ConvertScalarImageToRGB.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 53%] Building CXX object Examples/CMakeFiles/l_ExtractRegionFromImageByMask.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ExtractRegionFromImageByMask_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ExtractRegionFromImageByMask.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 53%] Linking CXX shared library ../lib/libl_ConvertScalarImageToRGB.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ConvertScalarImageToRGB.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ConvertScalarImageToRGB.so.2 -o ../lib/libl_ConvertScalarImageToRGB.so.2.1.0 CMakeFiles/l_ConvertScalarImageToRGB.dir/ConvertScalarImageToRGB.cxx.o CMakeFiles/l_ConvertScalarImageToRGB.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ConvertScalarImageToRGB.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ConvertScalarImageToRGB.so.2.1.0 ../lib/libl_ConvertScalarImageToRGB.so.2 ../lib/libl_ConvertScalarImageToRGB.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 53%] Built target l_ConvertScalarImageToRGB make -f Examples/CMakeFiles/l_LesionFilling.dir/build.make Examples/CMakeFiles/l_LesionFilling.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_LesionFilling.dir/DependInfo.cmake --color= Scanning dependencies of target l_LesionFilling make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_LesionFilling.dir/build.make Examples/CMakeFiles/l_LesionFilling.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 53%] Building CXX object Examples/CMakeFiles/l_LesionFilling.dir/LesionFilling.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LesionFilling_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LesionFilling.dir/LesionFilling.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/LesionFilling.cxx [ 54%] Building CXX object Examples/CMakeFiles/l_ExtractRegionFromImageByMask.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ExtractRegionFromImageByMask_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ExtractRegionFromImageByMask.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 54%] Linking CXX shared library ../lib/libl_ExtractRegionFromImageByMask.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ExtractRegionFromImageByMask.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ExtractRegionFromImageByMask.so.2 -o ../lib/libl_ExtractRegionFromImageByMask.so.2.1.0 CMakeFiles/l_ExtractRegionFromImageByMask.dir/ExtractRegionFromImageByMask.cxx.o CMakeFiles/l_ExtractRegionFromImageByMask.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ExtractRegionFromImageByMask.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 54%] Building CXX object Examples/CMakeFiles/l_CreateJacobianDeterminantImage.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateJacobianDeterminantImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateJacobianDeterminantImage.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ExtractRegionFromImageByMask.so.2.1.0 ../lib/libl_ExtractRegionFromImageByMask.so.2 ../lib/libl_ExtractRegionFromImageByMask.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 54%] Built target l_ExtractRegionFromImageByMask make -f Examples/CMakeFiles/l_ANTSIntegrateVelocityField.dir/build.make Examples/CMakeFiles/l_ANTSIntegrateVelocityField.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ANTSIntegrateVelocityField.dir/DependInfo.cmake --color= Scanning dependencies of target l_ANTSIntegrateVelocityField make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ANTSIntegrateVelocityField.dir/build.make Examples/CMakeFiles/l_ANTSIntegrateVelocityField.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 54%] Building CXX object Examples/CMakeFiles/l_ANTSIntegrateVelocityField.dir/ANTSIntegrateVelocityField.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSIntegrateVelocityField_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSIntegrateVelocityField.dir/ANTSIntegrateVelocityField.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ANTSIntegrateVelocityField.cxx [ 54%] Building CXX object Examples/CMakeFiles/l_CreateJacobianDeterminantImage.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateJacobianDeterminantImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateJacobianDeterminantImage.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 54%] Building CXX object Examples/CMakeFiles/l_SurfaceCurvature.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SurfaceCurvature_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SurfaceCurvature.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 54%] Linking CXX shared library ../lib/libl_CreateJacobianDeterminantImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_CreateJacobianDeterminantImage.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_CreateJacobianDeterminantImage.so.2 -o ../lib/libl_CreateJacobianDeterminantImage.so.2.1.0 CMakeFiles/l_CreateJacobianDeterminantImage.dir/CreateJacobianDeterminantImage.cxx.o CMakeFiles/l_CreateJacobianDeterminantImage.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_CreateJacobianDeterminantImage.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_CreateJacobianDeterminantImage.so.2.1.0 ../lib/libl_CreateJacobianDeterminantImage.so.2 ../lib/libl_CreateJacobianDeterminantImage.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 54%] Built target l_CreateJacobianDeterminantImage make -f Examples/CMakeFiles/ConvertScalarImageToRGB.dir/build.make Examples/CMakeFiles/ConvertScalarImageToRGB.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/ConvertScalarImageToRGB.dir/DependInfo.cmake --color= Scanning dependencies of target ConvertScalarImageToRGB make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/ConvertScalarImageToRGB.dir/build.make Examples/CMakeFiles/ConvertScalarImageToRGB.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 54%] Building CXX object Examples/CMakeFiles/ConvertScalarImageToRGB.dir/cli_ConvertScalarImageToRGB.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/ConvertScalarImageToRGB.dir/cli_ConvertScalarImageToRGB.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_ConvertScalarImageToRGB.cxx [ 54%] Linking CXX executable ../bin/ConvertScalarImageToRGB cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConvertScalarImageToRGB.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ConvertScalarImageToRGB.dir/cli_ConvertScalarImageToRGB.cxx.o -o ../bin/ConvertScalarImageToRGB -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_ConvertScalarImageToRGB.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 54%] Building CXX object Examples/CMakeFiles/l_SurfaceCurvature.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SurfaceCurvature_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SurfaceCurvature.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 54%] Built target ConvertScalarImageToRGB [ 54%] Building CXX object Examples/CMakeFiles/l_ANTSIntegrateVelocityField.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSIntegrateVelocityField_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSIntegrateVelocityField.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 54%] Linking CXX shared library ../lib/libl_SurfaceCurvature.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_SurfaceCurvature.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_SurfaceCurvature.so.2 -o ../lib/libl_SurfaceCurvature.so.2.1.0 CMakeFiles/l_SurfaceCurvature.dir/SurfaceCurvature.cxx.o CMakeFiles/l_SurfaceCurvature.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_SurfaceCurvature.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_SurfaceCurvature.so.2.1.0 ../lib/libl_SurfaceCurvature.so.2 ../lib/libl_SurfaceCurvature.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 54%] Built target l_SurfaceCurvature make -f Examples/CMakeFiles/l_ExtractSliceFromImage.dir/build.make Examples/CMakeFiles/l_ExtractSliceFromImage.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ExtractSliceFromImage.dir/DependInfo.cmake --color= Scanning dependencies of target l_ExtractSliceFromImage make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ExtractSliceFromImage.dir/build.make Examples/CMakeFiles/l_ExtractSliceFromImage.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 54%] Building CXX object Examples/CMakeFiles/l_ExtractSliceFromImage.dir/ExtractSliceFromImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ExtractSliceFromImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ExtractSliceFromImage.dir/ExtractSliceFromImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ExtractSliceFromImage.cxx [ 55%] Building CXX object Examples/CMakeFiles/l_ANTSIntegrateVelocityField.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSIntegrateVelocityField_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSIntegrateVelocityField.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make -f Examples/CMakeFiles/l_ANTSIntegrateVectorField.dir/build.make Examples/CMakeFiles/l_ANTSIntegrateVectorField.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_ANTSIntegrateVectorField.dir/DependInfo.cmake --color= Scanning dependencies of target l_ANTSIntegrateVectorField make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_ANTSIntegrateVectorField.dir/build.make Examples/CMakeFiles/l_ANTSIntegrateVectorField.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 56%] Building CXX object Examples/CMakeFiles/l_ANTSIntegrateVectorField.dir/ANTSIntegrateVectorField.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSIntegrateVectorField_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSIntegrateVectorField.dir/ANTSIntegrateVectorField.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/ANTSIntegrateVectorField.cxx [ 56%] Linking CXX shared library ../lib/libl_N4BiasFieldCorrection.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_N4BiasFieldCorrection.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_N4BiasFieldCorrection.so.2 -o ../lib/libl_N4BiasFieldCorrection.so.2.1.0 CMakeFiles/l_N4BiasFieldCorrection.dir/N4BiasFieldCorrection.cxx.o CMakeFiles/l_N4BiasFieldCorrection.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_N4BiasFieldCorrection.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_N4BiasFieldCorrection.so.2.1.0 ../lib/libl_N4BiasFieldCorrection.so.2 ../lib/libl_N4BiasFieldCorrection.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 56%] Built target l_N4BiasFieldCorrection [ 56%] Building CXX object Examples/CMakeFiles/l_ExtractSliceFromImage.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ExtractSliceFromImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ExtractSliceFromImage.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 56%] Building CXX object Examples/CMakeFiles/l_ExtractSliceFromImage.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ExtractSliceFromImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ExtractSliceFromImage.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 56%] Building CXX object Examples/CMakeFiles/l_ANTSIntegrateVectorField.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSIntegrateVectorField_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSIntegrateVectorField.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 56%] Linking CXX shared library ../lib/libl_ExtractSliceFromImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ExtractSliceFromImage.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ExtractSliceFromImage.so.2 -o ../lib/libl_ExtractSliceFromImage.so.2.1.0 CMakeFiles/l_ExtractSliceFromImage.dir/ExtractSliceFromImage.cxx.o CMakeFiles/l_ExtractSliceFromImage.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ExtractSliceFromImage.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ExtractSliceFromImage.so.2.1.0 ../lib/libl_ExtractSliceFromImage.so.2 ../lib/libl_ExtractSliceFromImage.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 56%] Built target l_ExtractSliceFromImage [ 56%] Building CXX object Examples/CMakeFiles/l_LesionFilling.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LesionFilling_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LesionFilling.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 56%] Building CXX object Examples/CMakeFiles/l_LesionFilling.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_LesionFilling_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_LesionFilling.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make -f Examples/CMakeFiles/l_SetDirectionByMatrix.dir/build.make Examples/CMakeFiles/l_SetDirectionByMatrix.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_SetDirectionByMatrix.dir/DependInfo.cmake --color= Scanning dependencies of target l_SetDirectionByMatrix make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_SetDirectionByMatrix.dir/build.make Examples/CMakeFiles/l_SetDirectionByMatrix.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 57%] Building CXX object Examples/CMakeFiles/l_SetDirectionByMatrix.dir/SetDirectionByMatrix.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SetDirectionByMatrix_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SetDirectionByMatrix.dir/SetDirectionByMatrix.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/SetDirectionByMatrix.cxx [ 57%] Linking CXX shared library ../lib/libl_N3BiasFieldCorrection.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_N3BiasFieldCorrection.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_N3BiasFieldCorrection.so.2 -o ../lib/libl_N3BiasFieldCorrection.so.2.1.0 CMakeFiles/l_N3BiasFieldCorrection.dir/N3BiasFieldCorrection.cxx.o CMakeFiles/l_N3BiasFieldCorrection.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_N3BiasFieldCorrection.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 57%] Building CXX object Examples/CMakeFiles/l_ANTSIntegrateVectorField.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_ANTSIntegrateVectorField_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_ANTSIntegrateVectorField.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_N3BiasFieldCorrection.so.2.1.0 ../lib/libl_N3BiasFieldCorrection.so.2 ../lib/libl_N3BiasFieldCorrection.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 57%] Linking CXX shared library ../lib/libl_ANTSIntegrateVelocityField.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ANTSIntegrateVelocityField.dir/link.txt --verbose=1 [ 57%] Built target l_N3BiasFieldCorrection make -f Examples/CMakeFiles/CreateJacobianDeterminantImage.dir/build.make Examples/CMakeFiles/CreateJacobianDeterminantImage.dir/depend /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ANTSIntegrateVelocityField.so.2 -o ../lib/libl_ANTSIntegrateVelocityField.so.2.1.0 CMakeFiles/l_ANTSIntegrateVelocityField.dir/ANTSIntegrateVelocityField.cxx.o CMakeFiles/l_ANTSIntegrateVelocityField.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ANTSIntegrateVelocityField.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/CreateJacobianDeterminantImage.dir/DependInfo.cmake --color= cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ANTSIntegrateVelocityField.so.2.1.0 ../lib/libl_ANTSIntegrateVelocityField.so.2 ../lib/libl_ANTSIntegrateVelocityField.so [ 58%] Linking CXX shared library ../lib/libl_LesionFilling.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_LesionFilling.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_LesionFilling.so.2 -o ../lib/libl_LesionFilling.so.2.1.0 CMakeFiles/l_LesionFilling.dir/LesionFilling.cxx.o CMakeFiles/l_LesionFilling.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_LesionFilling.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm Scanning dependencies of target CreateJacobianDeterminantImage make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/CreateJacobianDeterminantImage.dir/build.make Examples/CMakeFiles/CreateJacobianDeterminantImage.dir/build [ 58%] Built target l_ANTSIntegrateVelocityField make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 58%] Building CXX object Examples/CMakeFiles/l_SetDirectionByMatrix.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SetDirectionByMatrix_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SetDirectionByMatrix.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 59%] Building CXX object Examples/CMakeFiles/CreateJacobianDeterminantImage.dir/cli_CreateJacobianDeterminantImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/CreateJacobianDeterminantImage.dir/cli_CreateJacobianDeterminantImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_CreateJacobianDeterminantImage.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_LesionFilling.so.2.1.0 ../lib/libl_LesionFilling.so.2 ../lib/libl_LesionFilling.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 59%] Built target l_LesionFilling make -f Examples/CMakeFiles/l_CreateWarpedGridImage.dir/build.make Examples/CMakeFiles/l_CreateWarpedGridImage.dir/depend make -f Examples/CMakeFiles/GetConnectedComponentsFeatureImages.dir/build.make Examples/CMakeFiles/GetConnectedComponentsFeatureImages.dir/depend [ 59%] Linking CXX executable ../bin/CreateJacobianDeterminantImage cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/CreateJacobianDeterminantImage.dir/link.txt --verbose=1 make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_CreateWarpedGridImage.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CreateJacobianDeterminantImage.dir/cli_CreateJacobianDeterminantImage.cxx.o -o ../bin/CreateJacobianDeterminantImage -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_CreateJacobianDeterminantImage.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/GetConnectedComponentsFeatureImages.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' Scanning dependencies of target GetConnectedComponentsFeatureImages make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/GetConnectedComponentsFeatureImages.dir/build.make Examples/CMakeFiles/GetConnectedComponentsFeatureImages.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' Scanning dependencies of target l_CreateWarpedGridImage [ 59%] Building CXX object Examples/CMakeFiles/GetConnectedComponentsFeatureImages.dir/cli_GetConnectedComponentsFeatureImages.cxx.o make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 59%] Built target CreateJacobianDeterminantImage make -f Examples/CMakeFiles/l_CreateWarpedGridImage.dir/build.make Examples/CMakeFiles/l_CreateWarpedGridImage.dir/build make -f Examples/CMakeFiles/WarpTimeSeriesImageMultiTransform.dir/build.make Examples/CMakeFiles/WarpTimeSeriesImageMultiTransform.dir/depend cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/GetConnectedComponentsFeatureImages.dir/cli_GetConnectedComponentsFeatureImages.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_GetConnectedComponentsFeatureImages.cxx make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/WarpTimeSeriesImageMultiTransform.dir/DependInfo.cmake --color= [ 59%] Building CXX object Examples/CMakeFiles/l_CreateWarpedGridImage.dir/CreateWarpedGridImage.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateWarpedGridImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateWarpedGridImage.dir/CreateWarpedGridImage.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/CreateWarpedGridImage.cxx Scanning dependencies of target WarpTimeSeriesImageMultiTransform make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/WarpTimeSeriesImageMultiTransform.dir/build.make Examples/CMakeFiles/WarpTimeSeriesImageMultiTransform.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 59%] Building CXX object Examples/CMakeFiles/WarpTimeSeriesImageMultiTransform.dir/cli_WarpTimeSeriesImageMultiTransform.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/WarpTimeSeriesImageMultiTransform.dir/cli_WarpTimeSeriesImageMultiTransform.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_WarpTimeSeriesImageMultiTransform.cxx [ 59%] Linking CXX executable ../bin/WarpTimeSeriesImageMultiTransform cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/WarpTimeSeriesImageMultiTransform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/WarpTimeSeriesImageMultiTransform.dir/cli_WarpTimeSeriesImageMultiTransform.cxx.o -o ../bin/WarpTimeSeriesImageMultiTransform -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_WarpTimeSeriesImageMultiTransform.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 60%] Linking CXX executable ../bin/GetConnectedComponentsFeatureImages cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/GetConnectedComponentsFeatureImages.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GetConnectedComponentsFeatureImages.dir/cli_GetConnectedComponentsFeatureImages.cxx.o -o ../bin/GetConnectedComponentsFeatureImages -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_GetConnectedComponentsFeatureImages.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 60%] Built target GetConnectedComponentsFeatureImages make -f Examples/CMakeFiles/l_KellyKapowski.dir/build.make Examples/CMakeFiles/l_KellyKapowski.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_KellyKapowski.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 60%] Built target WarpTimeSeriesImageMultiTransform make -f Examples/CMakeFiles/LabelGeometryMeasures.dir/build.make Examples/CMakeFiles/LabelGeometryMeasures.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/LabelGeometryMeasures.dir/DependInfo.cmake --color= Scanning dependencies of target LabelGeometryMeasures make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/LabelGeometryMeasures.dir/build.make Examples/CMakeFiles/LabelGeometryMeasures.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 60%] Building CXX object Examples/CMakeFiles/LabelGeometryMeasures.dir/cli_LabelGeometryMeasures.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/LabelGeometryMeasures.dir/cli_LabelGeometryMeasures.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_LabelGeometryMeasures.cxx Scanning dependencies of target l_KellyKapowski make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_KellyKapowski.dir/build.make Examples/CMakeFiles/l_KellyKapowski.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 60%] Building CXX object Examples/CMakeFiles/l_KellyKapowski.dir/KellyKapowski.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_KellyKapowski_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_KellyKapowski.dir/KellyKapowski.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/KellyKapowski.cxx In file included from /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.h:335:0, from /build/ants-8vuM8K/ants-2.1.0/Examples/CreateWarpedGridImage.cxx:8: /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:605:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiTransformPoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&, bool, const IndexType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point; itk::WarpImageMultiTransformFilter::IndexType = itk::Index<3>]' /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:351:40: required from 'void itk::WarpImageMultiTransformFilter::ThreadedGenerateData(const OutputImageRegionType&, itk::ThreadIdType) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 3>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::OutputImageRegionType = itk::ImageRegion<3>; itk::ThreadIdType = unsigned int]' /build/ants-8vuM8K/ants-2.1.0/Examples/CreateWarpedGridImage.cxx:212:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for( int i = 0; i < ImageDimension; i++ ) ~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx: In instantiation of 'bool itk::WarpImageMultiTransformFilter::IsOutOfNumericBoundary(const PointType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point]': /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:605:31: required from 'bool itk::WarpImageMultiTransformFilter::MultiTransformPoint(const PointType&, itk::WarpImageMultiTransformFilter::PointType&, bool, const IndexType&) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::PointType = itk::Point; itk::WarpImageMultiTransformFilter::IndexType = itk::Index<2>]' /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:351:40: required from 'void itk::WarpImageMultiTransformFilter::ThreadedGenerateData(const OutputImageRegionType&, itk::ThreadIdType) [with TInputImage = itk::Image; TOutputImage = itk::Image; TDisplacementField = itk::Image, 2>; TTransform = itk::MatrixOffsetTransformBase; itk::WarpImageMultiTransformFilter::OutputImageRegionType = itk::ImageRegion<2>; itk::ThreadIdType = unsigned int]' /build/ants-8vuM8K/ants-2.1.0/Examples/CreateWarpedGridImage.cxx:212:1: required from here /build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities/itkWarpImageMultiTransformFilter.hxx:445:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] [ 60%] Linking CXX executable ../bin/LabelGeometryMeasures cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/LabelGeometryMeasures.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/LabelGeometryMeasures.dir/cli_LabelGeometryMeasures.cxx.o -o ../bin/LabelGeometryMeasures -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_LabelGeometryMeasures.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 60%] Built target LabelGeometryMeasures [ 60%] Building CXX object Examples/CMakeFiles/l_SetDirectionByMatrix.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SetDirectionByMatrix_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SetDirectionByMatrix.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 60%] Building CXX object Examples/CMakeFiles/l_CreateWarpedGridImage.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateWarpedGridImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateWarpedGridImage.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 60%] Linking CXX shared library ../lib/libl_ANTSIntegrateVectorField.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ANTSIntegrateVectorField.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ANTSIntegrateVectorField.so.2 -o ../lib/libl_ANTSIntegrateVectorField.so.2.1.0 CMakeFiles/l_ANTSIntegrateVectorField.dir/ANTSIntegrateVectorField.cxx.o CMakeFiles/l_ANTSIntegrateVectorField.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ANTSIntegrateVectorField.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ANTSIntegrateVectorField.so.2.1.0 ../lib/libl_ANTSIntegrateVectorField.so.2 ../lib/libl_ANTSIntegrateVectorField.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 60%] Building CXX object Examples/CMakeFiles/l_KellyKapowski.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_KellyKapowski_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_KellyKapowski.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 60%] Built target l_ANTSIntegrateVectorField [ 60%] Building CXX object Examples/CMakeFiles/l_CreateWarpedGridImage.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateWarpedGridImage_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateWarpedGridImage.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 60%] Linking CXX shared library ../lib/libl_SetDirectionByMatrix.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_SetDirectionByMatrix.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_SetDirectionByMatrix.so.2 -o ../lib/libl_SetDirectionByMatrix.so.2.1.0 CMakeFiles/l_SetDirectionByMatrix.dir/SetDirectionByMatrix.cxx.o CMakeFiles/l_SetDirectionByMatrix.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_SetDirectionByMatrix.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 60%] Building CXX object Examples/CMakeFiles/l_KellyKapowski.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_KellyKapowski_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_KellyKapowski.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_SetDirectionByMatrix.so.2.1.0 ../lib/libl_SetDirectionByMatrix.so.2 ../lib/libl_SetDirectionByMatrix.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 60%] Built target l_SetDirectionByMatrix make -f Examples/CMakeFiles/MeasureMinMaxMean.dir/build.make Examples/CMakeFiles/MeasureMinMaxMean.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/MeasureMinMaxMean.dir/DependInfo.cmake --color= Scanning dependencies of target MeasureMinMaxMean make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/MeasureMinMaxMean.dir/build.make Examples/CMakeFiles/MeasureMinMaxMean.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 60%] Building CXX object Examples/CMakeFiles/MeasureMinMaxMean.dir/cli_MeasureMinMaxMean.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/MeasureMinMaxMean.dir/cli_MeasureMinMaxMean.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_MeasureMinMaxMean.cxx [ 60%] Linking CXX executable ../bin/MeasureMinMaxMean cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeasureMinMaxMean.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MeasureMinMaxMean.dir/cli_MeasureMinMaxMean.cxx.o -o ../bin/MeasureMinMaxMean -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_MeasureMinMaxMean.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 60%] Built target MeasureMinMaxMean make -f Examples/CMakeFiles/l_CreateDTICohort.dir/build.make Examples/CMakeFiles/l_CreateDTICohort.dir/depend make -f Examples/CMakeFiles/l_SetSpacing.dir/build.make Examples/CMakeFiles/l_SetSpacing.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_CreateDTICohort.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_SetSpacing.dir/DependInfo.cmake --color= Scanning dependencies of target l_SetSpacing make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_SetSpacing.dir/build.make Examples/CMakeFiles/l_SetSpacing.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' Scanning dependencies of target l_CreateDTICohort make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_CreateDTICohort.dir/build.make Examples/CMakeFiles/l_CreateDTICohort.dir/build [ 60%] Building CXX object Examples/CMakeFiles/l_SetSpacing.dir/SetSpacing.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SetSpacing_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SetSpacing.dir/SetSpacing.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/SetSpacing.cxx make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 61%] Building CXX object Examples/CMakeFiles/l_CreateDTICohort.dir/CreateDTICohort.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateDTICohort_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateDTICohort.dir/CreateDTICohort.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/CreateDTICohort.cxx make -f Examples/CMakeFiles/l_AverageAffineTransformNoRigid.dir/build.make Examples/CMakeFiles/l_AverageAffineTransformNoRigid.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_AverageAffineTransformNoRigid.dir/DependInfo.cmake --color= [ 61%] Building CXX object Examples/CMakeFiles/l_SetSpacing.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SetSpacing_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SetSpacing.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx Scanning dependencies of target l_AverageAffineTransformNoRigid make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_AverageAffineTransformNoRigid.dir/build.make Examples/CMakeFiles/l_AverageAffineTransformNoRigid.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 61%] Building CXX object Examples/CMakeFiles/l_AverageAffineTransformNoRigid.dir/AverageAffineTransformNoRigid.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageAffineTransformNoRigid_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageAffineTransformNoRigid.dir/AverageAffineTransformNoRigid.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/AverageAffineTransformNoRigid.cxx [ 61%] Building CXX object Examples/CMakeFiles/l_SetSpacing.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_SetSpacing_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_SetSpacing.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 62%] Linking CXX shared library ../lib/libl_CreateWarpedGridImage.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_CreateWarpedGridImage.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_CreateWarpedGridImage.so.2 -o ../lib/libl_CreateWarpedGridImage.so.2.1.0 CMakeFiles/l_CreateWarpedGridImage.dir/CreateWarpedGridImage.cxx.o CMakeFiles/l_CreateWarpedGridImage.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_CreateWarpedGridImage.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_CreateWarpedGridImage.so.2.1.0 ../lib/libl_CreateWarpedGridImage.so.2 ../lib/libl_CreateWarpedGridImage.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 62%] Building CXX object Examples/CMakeFiles/l_AverageAffineTransformNoRigid.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageAffineTransformNoRigid_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageAffineTransformNoRigid.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 62%] Built target l_CreateWarpedGridImage [ 62%] Building CXX object Examples/CMakeFiles/l_CreateDTICohort.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateDTICohort_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateDTICohort.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 63%] Building CXX object Examples/CMakeFiles/l_AverageAffineTransformNoRigid.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_AverageAffineTransformNoRigid_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_AverageAffineTransformNoRigid.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make -f Examples/CMakeFiles/l_TileImages.dir/build.make Examples/CMakeFiles/l_TileImages.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_TileImages.dir/DependInfo.cmake --color= Scanning dependencies of target l_TileImages make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_TileImages.dir/build.make Examples/CMakeFiles/l_TileImages.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 63%] Building CXX object Examples/CMakeFiles/l_TileImages.dir/TileImages.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_TileImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_TileImages.dir/TileImages.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/TileImages.cxx [ 64%] Linking CXX shared library ../lib/libl_SetSpacing.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_SetSpacing.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_SetSpacing.so.2 -o ../lib/libl_SetSpacing.so.2.1.0 CMakeFiles/l_SetSpacing.dir/SetSpacing.cxx.o CMakeFiles/l_SetSpacing.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_SetSpacing.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 64%] Linking CXX shared library ../lib/libl_AverageAffineTransformNoRigid.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_AverageAffineTransformNoRigid.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_AverageAffineTransformNoRigid.so.2 -o ../lib/libl_AverageAffineTransformNoRigid.so.2.1.0 CMakeFiles/l_AverageAffineTransformNoRigid.dir/AverageAffineTransformNoRigid.cxx.o CMakeFiles/l_AverageAffineTransformNoRigid.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_AverageAffineTransformNoRigid.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make -f Examples/CMakeFiles/l_CreateTiledMosaic.dir/build.make Examples/CMakeFiles/l_CreateTiledMosaic.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_CreateTiledMosaic.dir/DependInfo.cmake --color= cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_SetSpacing.so.2.1.0 ../lib/libl_SetSpacing.so.2 ../lib/libl_SetSpacing.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 64%] Built target l_SetSpacing make -f Examples/CMakeFiles/antsTransformInfo.dir/build.make Examples/CMakeFiles/antsTransformInfo.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/antsTransformInfo.dir/DependInfo.cmake --color= Scanning dependencies of target l_CreateTiledMosaic make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_CreateTiledMosaic.dir/build.make Examples/CMakeFiles/l_CreateTiledMosaic.dir/build Scanning dependencies of target antsTransformInfo make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/antsTransformInfo.dir/build.make Examples/CMakeFiles/antsTransformInfo.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 64%] Building CXX object Examples/CMakeFiles/l_CreateTiledMosaic.dir/CreateTiledMosaic.cxx.o [ 65%] Building CXX object Examples/CMakeFiles/antsTransformInfo.dir/cli_antsTransformInfo.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/antsTransformInfo.dir/cli_antsTransformInfo.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_antsTransformInfo.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateTiledMosaic_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateTiledMosaic.dir/CreateTiledMosaic.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/CreateTiledMosaic.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_AverageAffineTransformNoRigid.so.2.1.0 ../lib/libl_AverageAffineTransformNoRigid.so.2 ../lib/libl_AverageAffineTransformNoRigid.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 65%] Linking CXX executable ../bin/antsTransformInfo cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/antsTransformInfo.dir/link.txt --verbose=1 [ 65%] Built target l_AverageAffineTransformNoRigid make -f Examples/CMakeFiles/ConvertToJpg.dir/build.make Examples/CMakeFiles/ConvertToJpg.dir/depend /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/antsTransformInfo.dir/cli_antsTransformInfo.cxx.o -o ../bin/antsTransformInfo -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_antsTransformInfo.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/ConvertToJpg.dir/DependInfo.cmake --color= Scanning dependencies of target ConvertToJpg make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/ConvertToJpg.dir/build.make Examples/CMakeFiles/ConvertToJpg.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 65%] Building CXX object Examples/CMakeFiles/ConvertToJpg.dir/cli_ConvertToJpg.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -o CMakeFiles/ConvertToJpg.dir/cli_ConvertToJpg.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/cli_ConvertToJpg.cxx make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 65%] Built target antsTransformInfo make -f Examples/CMakeFiles/l_antsSliceRegularizedRegistration.dir/build.make Examples/CMakeFiles/l_antsSliceRegularizedRegistration.dir/depend [ 66%] Linking CXX executable ../bin/ConvertToJpg cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConvertToJpg.dir/link.txt --verbose=1 make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_antsSliceRegularizedRegistration.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ConvertToJpg.dir/cli_ConvertToJpg.cxx.o -o ../bin/ConvertToJpg -Wl,-rpath,/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/lib:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libl_ConvertToJpg.so.2.1.0 ../lib/libantsUtilities.a -ldouble-conversion /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 -lCharLS /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm Scanning dependencies of target l_antsSliceRegularizedRegistration make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_antsSliceRegularizedRegistration.dir/build.make Examples/CMakeFiles/l_antsSliceRegularizedRegistration.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 66%] Building CXX object Examples/CMakeFiles/l_antsSliceRegularizedRegistration.dir/antsSliceRegularizedRegistration.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsSliceRegularizedRegistration_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsSliceRegularizedRegistration.dir/antsSliceRegularizedRegistration.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/antsSliceRegularizedRegistration.cxx make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 66%] Built target ConvertToJpg [ 67%] Building CXX object Examples/CMakeFiles/l_CreateTiledMosaic.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateTiledMosaic_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateTiledMosaic.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 67%] Building CXX object Examples/CMakeFiles/l_CreateTiledMosaic.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateTiledMosaic_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateTiledMosaic.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 67%] Building CXX object Examples/CMakeFiles/l_TileImages.dir/__/Utilities/antsCommandLineParser.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_TileImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_TileImages.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx [ 67%] Building CXX object Examples/CMakeFiles/l_TileImages.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_TileImages_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_TileImages.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx make -f Examples/CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/build.make Examples/CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/depend make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/ants-8vuM8K/ants-2.1.0 /build/ants-8vuM8K/ants-2.1.0/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples/CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/DependInfo.cmake --color= Scanning dependencies of target l_PermuteFlipImageOrientationAxes make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' make -f Examples/CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/build.make Examples/CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/build make[4]: Entering directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 67%] Building CXX object Examples/CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/PermuteFlipImageOrientationAxes.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_PermuteFlipImageOrientationAxes_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/PermuteFlipImageOrientationAxes.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Examples/PermuteFlipImageOrientationAxes.cxx [ 67%] Linking CXX shared library ../lib/libl_TileImages.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_TileImages.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_TileImages.so.2 -o ../lib/libl_TileImages.so.2.1.0 CMakeFiles/l_TileImages.dir/TileImages.cxx.o CMakeFiles/l_TileImages.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_TileImages.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_TileImages.so.2.1.0 ../lib/libl_TileImages.so.2 ../lib/libl_TileImages.so /build/ants-8vuM8K/ants-2.1.0/Examples/antsSliceRegularizedRegistration.cxx: In function 'int ants::ants_slice_regularized_registration(itk::ants::CommandLineParser*) [with unsigned int ImageDimension = 3]': /build/ants-8vuM8K/ants-2.1.0/Examples/antsSliceRegularizedRegistration.cxx:911:11: warning: iteration 2 invokes undefined behavior [-Waggressive-loop-optimizations] vecout[xx] = vec[xx]; ^~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsSliceRegularizedRegistration.cxx:908:38: note: within this loop for( unsigned int xx = 0; xx < ImageDimension; xx++ ) ~~~^~~~~~~~~~~~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsSliceRegularizedRegistration.cxx:964:13: warning: iteration 2 invokes undefined behavior [-Waggressive-loop-optimizations] vecout[xx] = vec[xx]; ^~~~~~ /build/ants-8vuM8K/ants-2.1.0/Examples/antsSliceRegularizedRegistration.cxx:961:40: note: within this loop for( unsigned int xx = 0; xx < ImageDimension; xx++ ) ~~~^~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 67%] Built target l_TileImages [ 67%] Building CXX object Examples/CMakeFiles/l_CreateDTICohort.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_CreateDTICohort_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_CreateDTICohort.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx c++: internal compiler error: Killed (program cc1plus) Please submit a full bug report, with preprocessed source if appropriate. See for instructions. Examples/CMakeFiles/l_ImageMath.dir/build.make:65: recipe for target 'Examples/CMakeFiles/l_ImageMath.dir/ImageMath.cxx.o' failed make[4]: *** [Examples/CMakeFiles/l_ImageMath.dir/ImageMath.cxx.o] Error 4 make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' CMakeFiles/Makefile2:3242: recipe for target 'Examples/CMakeFiles/l_ImageMath.dir/all' failed make[3]: *** [Examples/CMakeFiles/l_ImageMath.dir/all] Error 2 make[3]: *** Waiting for unfinished jobs.... [ 67%] Linking CXX shared library ../lib/libl_CreateDTICohort.so [ 67%] Building CXX object Examples/CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/__/Utilities/antsCommandLineParser.cxx.o [ 67%] Building CXX object Examples/CMakeFiles/l_antsSliceRegularizedRegistration.dir/__/Utilities/antsCommandLineParser.cxx.o [ 67%] Building CXX object Examples/CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsSliceRegularizedRegistration_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsSliceRegularizedRegistration.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_CreateDTICohort.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_CreateDTICohort.so.2 -o ../lib/libl_CreateDTICohort.so.2.1.0 CMakeFiles/l_CreateDTICohort.dir/CreateDTICohort.cxx.o CMakeFiles/l_CreateDTICohort.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_CreateDTICohort.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_PermuteFlipImageOrientationAxes_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/__/Utilities/antsCommandLineParser.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineParser.cxx cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_PermuteFlipImageOrientationAxes_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 67%] Linking CXX shared library ../lib/libl_CreateTiledMosaic.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_CreateTiledMosaic.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_CreateTiledMosaic.so.2 -o ../lib/libl_CreateTiledMosaic.so.2.1.0 CMakeFiles/l_CreateTiledMosaic.dir/CreateTiledMosaic.cxx.o CMakeFiles/l_CreateTiledMosaic.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_CreateTiledMosaic.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm [ 67%] Linking CXX shared library ../lib/libl_simpleSynRegistration.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_simpleSynRegistration.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_simpleSynRegistration.so.2 -o ../lib/libl_simpleSynRegistration.so.2.1.0 CMakeFiles/l_simpleSynRegistration.dir/simpleSynRegistration.cxx.o CMakeFiles/l_simpleSynRegistration.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_simpleSynRegistration.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_CreateDTICohort.so.2.1.0 ../lib/libl_CreateDTICohort.so.2 ../lib/libl_CreateDTICohort.so [ 67%] Linking CXX shared library ../lib/libl_ANTS.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_ANTS.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_ANTS.so.2 -o ../lib/libl_ANTS.so.2.1.0 CMakeFiles/l_ANTS.dir/ANTS.cxx.o CMakeFiles/l_ANTS.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_ANTS.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 67%] Built target l_CreateDTICohort [ 67%] Building CXX object Examples/CMakeFiles/l_antsSliceRegularizedRegistration.dir/__/Utilities/antsCommandLineOption.cxx.o cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dl_antsSliceRegularizedRegistration_EXPORTS -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples -I/build/ants-8vuM8K/ants-2.1.0/Examples/. -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Temporary -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Tensor -I/build/ants-8vuM8K/ants-2.1.0/Examples/../GraphTheory -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageSegmentation -I/build/ants-8vuM8K/ants-2.1.0/Examples/../ImageRegistration -I/build/ants-8vuM8K/ants-2.1.0/Examples/../Utilities -I/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/x86_64-linux-gnu -I/usr/include/nifti -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -isystem /usr/include/ITK-4.12 -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -fPIC -o CMakeFiles/l_antsSliceRegularizedRegistration.dir/__/Utilities/antsCommandLineOption.cxx.o -c /build/ants-8vuM8K/ants-2.1.0/Utilities/antsCommandLineOption.cxx [ 67%] Linking CXX shared library ../lib/libl_antsApplyTransforms.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_antsApplyTransforms.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_antsApplyTransforms.so.2 -o ../lib/libl_antsApplyTransforms.so.2.1.0 CMakeFiles/l_antsApplyTransforms.dir/antsApplyTransforms.cxx.o CMakeFiles/l_antsApplyTransforms.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_antsApplyTransforms.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_CreateTiledMosaic.so.2.1.0 ../lib/libl_CreateTiledMosaic.so.2 ../lib/libl_CreateTiledMosaic.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 67%] Built target l_CreateTiledMosaic cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_simpleSynRegistration.so.2.1.0 ../lib/libl_simpleSynRegistration.so.2 ../lib/libl_simpleSynRegistration.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 67%] Built target l_simpleSynRegistration cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_ANTS.so.2.1.0 ../lib/libl_ANTS.so.2 ../lib/libl_ANTS.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 67%] Built target l_ANTS [ 67%] Linking CXX shared library ../lib/libl_PermuteFlipImageOrientationAxes.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_PermuteFlipImageOrientationAxes.so.2 -o ../lib/libl_PermuteFlipImageOrientationAxes.so.2.1.0 CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/PermuteFlipImageOrientationAxes.cxx.o CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_PermuteFlipImageOrientationAxes.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_PermuteFlipImageOrientationAxes.so.2.1.0 ../lib/libl_PermuteFlipImageOrientationAxes.so.2 ../lib/libl_PermuteFlipImageOrientationAxes.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 67%] Built target l_PermuteFlipImageOrientationAxes cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_antsApplyTransforms.so.2.1.0 ../lib/libl_antsApplyTransforms.so.2 ../lib/libl_antsApplyTransforms.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 67%] Built target l_antsApplyTransforms [ 67%] Linking CXX shared library ../lib/libl_antsSliceRegularizedRegistration.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_antsSliceRegularizedRegistration.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_antsSliceRegularizedRegistration.so.2 -o ../lib/libl_antsSliceRegularizedRegistration.so.2.1.0 CMakeFiles/l_antsSliceRegularizedRegistration.dir/antsSliceRegularizedRegistration.cxx.o CMakeFiles/l_antsSliceRegularizedRegistration.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_antsSliceRegularizedRegistration.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_antsSliceRegularizedRegistration.so.2.1.0 ../lib/libl_antsSliceRegularizedRegistration.so.2 ../lib/libl_antsSliceRegularizedRegistration.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 67%] Built target l_antsSliceRegularizedRegistration [ 67%] Linking CXX shared library ../lib/libl_KellyKapowski.so cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/l_KellyKapowski.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/ants-8vuM8K/ants-2.1.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libl_KellyKapowski.so.2 -o ../lib/libl_KellyKapowski.so.2.1.0 CMakeFiles/l_KellyKapowski.dir/KellyKapowski.cxx.o CMakeFiles/l_KellyKapowski.dir/__/Utilities/antsCommandLineParser.cxx.o CMakeFiles/l_KellyKapowski.dir/__/Utilities/antsCommandLineOption.cxx.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial: ../lib/libantsUtilities.a -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 /usr/lib/libITKDeprecated-4.12.so.1 /usr/lib/libITKIOLSM-4.12.so.1 -lexpat /usr/lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm /usr/lib/libITKIOCSV-4.12.so.1 /usr/lib/libITKIOHDF5-4.12.so.1 /usr/lib/libITKIOMRC-4.12.so.1 /usr/lib/libITKOptimizersv4-4.12.so.1 /usr/lib/libITKReview-4.12.so.1 /usr/lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread /usr/lib/libITKDICOMParser-4.12.so.1 /usr/lib/libITKgiftiio-4.12.so.1 -lexpat /usr/lib/libITKIOBMP-4.12.so.1 /usr/lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.2 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.2 /usr/lib/libITKIOGIPL-4.12.so.1 /usr/lib/libITKIOJPEG-4.12.so.1 /usr/lib/libITKIOMeta-4.12.so.1 /usr/lib/libITKIONIFTI-4.12.so.1 -lznz -lniftiio /usr/lib/libITKIONRRD-4.12.so.1 /usr/lib/libITKNrrdIO-4.12.so.1 /usr/lib/libITKIOPNG-4.12.so.1 /usr/lib/libITKIOTIFF-4.12.so.1 /usr/lib/libITKIOVTK-4.12.so.1 /usr/lib/libITKLabelMap-4.12.so.1 /usr/lib/libITKQuadEdgeMesh-4.12.so.1 /usr/lib/libITKPolynomials-4.12.so.1 /usr/lib/libITKBiasCorrection-4.12.so.1 /usr/lib/libITKBioCell-4.12.so.1 /usr/lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/libITKIOBioRad-4.12.so.1 /usr/lib/libITKIOStimulate-4.12.so.1 /usr/lib/libITKIOSpatialObjects-4.12.so.1 /usr/lib/libITKIOXML-4.12.so.1 /usr/lib/libITKFEM-4.12.so.1 /usr/lib/libITKMetaIO-4.12.so.1 -lz /usr/lib/libITKOptimizers-4.12.so.1 /usr/lib/libITKIOGE-4.12.so.1 /usr/lib/libITKIOSiemens-4.12.so.1 /usr/lib/libITKIOIPL-4.12.so.1 /usr/lib/libITKIOTransformHDF5-4.12.so.1 /usr/lib/libITKIOTransformInsightLegacy-4.12.so.1 /usr/lib/libITKIOTransformMatlab-4.12.so.1 /usr/lib/libITKIOTransformBase-4.12.so.1 /usr/lib/libITKTransformFactory-4.12.so.1 /usr/lib/libITKKLMRegionGrowing-4.12.so.1 /usr/lib/libITKVTK-4.12.so.1 /usr/lib/libITKWatersheds-4.12.so.1 /usr/lib/libITKStatistics-4.12.so.1 /usr/lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/libITKSpatialObjects-4.12.so.1 /usr/lib/libITKMesh-4.12.so.1 /usr/lib/libITKTransform-4.12.so.1 /usr/lib/libITKPath-4.12.so.1 /usr/lib/libitkopenjpeg-4.12.so.1 /usr/lib/libITKIOImageBase-4.12.so.1 /usr/lib/libITKVideoCore-4.12.so.1 /usr/lib/libITKCommon-4.12.so.1 /usr/lib/libitksys-4.12.so.1 /usr/lib/libITKVNLInstantiation-4.12.so.1 /usr/lib/libitkvnl_algo-4.12.so.1 /usr/lib/libitkvnl-4.12.so.1 /usr/lib/libitkv3p_netlib-4.12.so.1 /usr/lib/libitknetlib-4.12.so.1 /usr/lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm cd /build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu/Examples && /usr/bin/cmake -E cmake_symlink_library ../lib/libl_KellyKapowski.so.2.1.0 ../lib/libl_KellyKapowski.so.2 ../lib/libl_KellyKapowski.so make[4]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' [ 67%] Built target l_KellyKapowski make[3]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' Makefile:165: recipe for target 'all' failed make[2]: *** [all] Error 2 make[2]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0/obj-x86_64-linux-gnu' dh_auto_build: make -j10 returned exit code 2 cd /build/ants-8vuM8K/ants-2.1.0 debian/rules:55: recipe for target 'override_dh_auto_build' failed make[1]: *** [override_dh_auto_build] Error 2 make[1]: Leaving directory '/build/ants-8vuM8K/ants-2.1.0' debian/rules:33: recipe for target 'build-arch' failed make: *** [build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2 E: run_chroot failed: E: command failed: chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/ants-8vuM8K/ants-2.1.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1505120388" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" W: listening on child socket failed: I: removing tempdir /tmp/mmdebstrap.izO54HrHXh... mmdebstrap failed