Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/y/yade/yade_2022.01a-7+b2_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/yade-2022.01a-7+b2e065ft6p/yade_2022.01a-7+b2_amd64.buildinfo Get source package info: yade=2022.01a-7 Source URL: http://snapshot.notset.fr/mr/package/yade/2022.01a-7/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=adduser=3.121 autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6 binutils=2.38-3 binutils-common=2.38-3 binutils-x86-64-linux-gnu=2.38-3 blt=2.5.3+dfsg-4.1 bsdextrautils=2.38-4 bsdutils=1:2.38-4 build-essential=12.9 bzip2=1.0.8-5 ca-certificates=20211016 ca-certificates-java=20190909 cmake=3.23.1-2 cmake-data=3.23.1-2 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.2.0-20 dash=0.5.11+git20210903+057cd650a4ed-8 debconf=1.5.79 debhelper=13.7.1 debianutils=5.7-0.1 default-jdk=2:1.11-72 default-jdk-headless=2:1.11-72 default-jre=2:1.11-72 default-jre-headless=2:1.11-72 default-libmysqlclient-dev=1.0.8 dh-autoreconf=20 dh-elpa-helper=2.0.10 dh-exec=0.23.4 dh-python=5.20220403 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.7 dpkg-dev=1.21.7 dwz=0.14-1 emacsen-common=3.0.4 file=1:5.41-3 findutils=4.9.0-3 fontconfig=2.13.1-4.4 fontconfig-config=2.13.1-4.4 fonts-dejavu-core=2.37-2 fonts-lyx=2.3.6-1 freeglut3=2.8.1-6 freeglut3-dev=2.8.1-6 g++=4:11.2.0-2 g++-11=11.2.0-20 gcc=4:11.2.0-2 gcc-11=11.2.0-20 gcc-11-base=11.2.0-20 gcc-12-base=12-20220319-1 gdal-data=3.4.2+dfsg-1 gettext=0.21-6 gettext-base=0.21-6 gfortran-11=11.2.0-20 graphviz=2.42.2-6+b3 grep=3.7-1 groff-base=1.22.4-8 gzip=1.12-1 hdf5-helpers=1.10.7+repack-4 help2man=1.49.2 hostname=3.23 ibverbs-providers=39.0-1+b1 icu-devtools=71.1-2 init-system-helpers=1.62 intltool-debian=0.35.0+20060710.5 java-common=0.72 libacl1=2.3.1-1 libaec-dev=1.0.6-1 libaec0=1.0.6-1 libamd2=1:5.12.0+dfsg-1 libann0=1.1.2+doc-7 libaom-dev=3.3.0-1 libaom3=3.3.0-1 libarchive-zip-perl=1.68-1 libarchive13=3.6.0-1 libarmadillo-dev=1:10.8.2+dfsg-1+b1 libarmadillo10=1:10.8.2+dfsg-1+b1 libarpack2=3.8.0-1 libarpack2-dev=3.8.0-1 libasan6=11.2.0-20 libasound2=1.2.6.1-2+b1 libasound2-data=1.2.6.1-2 libatomic1=12-20220319-1 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libavahi-client3=0.8-5 libavahi-common-data=0.8-5 libavahi-common3=0.8-5 libavcodec-dev=7:4.4.2-1 libavcodec58=7:4.4.2-1 libavformat-dev=7:4.4.2-1 libavformat58=7:4.4.2-1 libavutil-dev=7:4.4.2-1 libavutil56=7:4.4.2-1 libbinutils=2.38-3 libblkid-dev=2.38-4 libblkid1=2.38-4 libblosc-dev=1.21.1+ds2-2 libblosc1=1.21.1+ds2-2 libbluray2=1:1.3.1-1 libboost-all-dev=1.74.0.3 libboost-atomic-dev=1.74.0.3 libboost-atomic1.74-dev=1.74.0-14+b1 libboost-atomic1.74.0=1.74.0-14+b1 libboost-chrono-dev=1.74.0.3 libboost-chrono1.74-dev=1.74.0-14+b1 libboost-chrono1.74.0=1.74.0-14+b1 libboost-container-dev=1.74.0.3 libboost-container1.74-dev=1.74.0-14+b1 libboost-container1.74.0=1.74.0-14+b1 libboost-context-dev=1.74.0.3 libboost-context1.74-dev=1.74.0-14+b1 libboost-context1.74.0=1.74.0-14+b1 libboost-coroutine-dev=1.74.0.3 libboost-coroutine1.74-dev=1.74.0-14+b1 libboost-coroutine1.74.0=1.74.0-14+b1 libboost-date-time-dev=1.74.0.3 libboost-date-time1.74-dev=1.74.0-14+b1 libboost-date-time1.74.0=1.74.0-14+b1 libboost-dev=1.74.0.3 libboost-exception-dev=1.74.0.3 libboost-exception1.74-dev=1.74.0-14+b1 libboost-fiber-dev=1.74.0.3 libboost-fiber1.74-dev=1.74.0-14+b1 libboost-fiber1.74.0=1.74.0-14+b1 libboost-filesystem-dev=1.74.0.3 libboost-filesystem1.74-dev=1.74.0-14+b1 libboost-filesystem1.74.0=1.74.0-14+b1 libboost-graph-dev=1.74.0.3 libboost-graph-parallel-dev=1.74.0.3 libboost-graph-parallel1.74-dev=1.74.0-14+b1 libboost-graph-parallel1.74.0=1.74.0-14+b1 libboost-graph1.74-dev=1.74.0-14+b1 libboost-graph1.74.0=1.74.0-14+b1 libboost-iostreams-dev=1.74.0.3 libboost-iostreams1.74-dev=1.74.0-14+b1 libboost-iostreams1.74.0=1.74.0-14+b1 libboost-locale-dev=1.74.0.3 libboost-locale1.74-dev=1.74.0-14+b1 libboost-locale1.74.0=1.74.0-14+b1 libboost-log-dev=1.74.0.3 libboost-log1.74-dev=1.74.0-14+b1 libboost-log1.74.0=1.74.0-14+b1 libboost-math-dev=1.74.0.3 libboost-math1.74-dev=1.74.0-14+b1 libboost-math1.74.0=1.74.0-14+b1 libboost-mpi-dev=1.74.0.3 libboost-mpi-python-dev=1.74.0.3 libboost-mpi-python1.74-dev=1.74.0-14+b1 libboost-mpi-python1.74.0=1.74.0-14+b1 libboost-mpi1.74-dev=1.74.0-14+b1 libboost-mpi1.74.0=1.74.0-14+b1 libboost-nowide-dev=1.74.0.3 libboost-nowide1.74-dev=1.74.0-14+b1 libboost-nowide1.74.0=1.74.0-14+b1 libboost-numpy-dev=1.74.0.3 libboost-numpy1.74-dev=1.74.0-14+b1 libboost-numpy1.74.0=1.74.0-14+b1 libboost-program-options-dev=1.74.0.3 libboost-program-options1.74-dev=1.74.0-14+b1 libboost-program-options1.74.0=1.74.0-14+b1 libboost-python-dev=1.74.0.3 libboost-python1.74-dev=1.74.0-14+b1 libboost-python1.74.0=1.74.0-14+b1 libboost-random-dev=1.74.0.3 libboost-random1.74-dev=1.74.0-14+b1 libboost-random1.74.0=1.74.0-14+b1 libboost-regex-dev=1.74.0.3 libboost-regex1.74-dev=1.74.0-14+b1 libboost-regex1.74.0=1.74.0-14+b1 libboost-serialization-dev=1.74.0.3 libboost-serialization1.74-dev=1.74.0-14+b1 libboost-serialization1.74.0=1.74.0-14+b1 libboost-stacktrace-dev=1.74.0.3 libboost-stacktrace1.74-dev=1.74.0-14+b1 libboost-stacktrace1.74.0=1.74.0-14+b1 libboost-system-dev=1.74.0.3 libboost-system1.74-dev=1.74.0-14+b1 libboost-system1.74.0=1.74.0-14+b1 libboost-test-dev=1.74.0.3 libboost-test1.74-dev=1.74.0-14+b1 libboost-test1.74.0=1.74.0-14+b1 libboost-thread-dev=1.74.0.3 libboost-thread1.74-dev=1.74.0-14+b1 libboost-thread1.74.0=1.74.0-14+b1 libboost-timer-dev=1.74.0.3 libboost-timer1.74-dev=1.74.0-14+b1 libboost-timer1.74.0=1.74.0-14+b1 libboost-tools-dev=1.74.0.3 libboost-type-erasure-dev=1.74.0.3 libboost-type-erasure1.74-dev=1.74.0-14+b1 libboost-type-erasure1.74.0=1.74.0-14+b1 libboost-wave-dev=1.74.0.3 libboost-wave1.74-dev=1.74.0-14+b1 libboost-wave1.74.0=1.74.0-14+b1 libboost1.74-dev=1.74.0-14+b1 libboost1.74-tools-dev=1.74.0-14+b1 libbrotli-dev=1.0.9-2+b3 libbrotli1=1.0.9-2+b3 libbsd0=0.11.6-1 libbtf1=1:5.12.0+dfsg-1 libbz2-1.0=1.0.8-5 libbz2-dev=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dev=2.33-7 libcairo-gobject2=1.16.0-5 libcairo2=1.16.0-5 libcamd2=1:5.12.0+dfsg-1 libcap-ng0=0.7.9-2.2+b2 libcap2=1:2.44-1 libcbor0.8=0.8.0-2 libcc1-0=12-20220319-1 libccolamd2=1:5.12.0+dfsg-1 libcdt5=2.42.2-6+b3 libcfitsio-dev=4.0.0-1 libcfitsio9=4.0.0-1 libcgal-dev=5.4-2 libcgraph6=2.42.2-6+b3 libcharls-dev=2.3.4-1 libcharls2=2.3.4-1 libcholmod3=1:5.12.0+dfsg-1 libchromaprint1=1.5.1-2 libcodec2-1.0=1.0.1-3 libcolamd2=1:5.12.0+dfsg-1 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38-3 libctf0=2.38-3 libcups2=2.4.1op1-2 libcurl3-gnutls=7.82.0-2 libcurl4=7.82.0-2 libcurl4-openssl-dev=7.82.0-2 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libpython3-stdlib=3.10.4-1 libpython3.10=3.10.4-3 libpython3.10-dev=3.10.4-3 libpython3.10-minimal=3.10.4-3 libpython3.10-stdlib=3.10.4-3 libpython3.9-minimal=3.9.12-1 libpython3.9-stdlib=3.9.12-1 libqglviewer-dev-qt5=2.6.3+dfsg2-9 libqglviewer-headers=2.6.3+dfsg2-9 libqglviewer2-qt5=2.6.3+dfsg2-9 libqhull-dev=2020.2-4 libqhull-r8.0=2020.2-4 libqhull8.0=2020.2-4 libqhullcpp8.0=2020.2-4 libqt5concurrent5=5.15.2+dfsg-16 libqt5core5a=5.15.2+dfsg-16 libqt5dbus5=5.15.2+dfsg-16 libqt5designer5=5.15.2-5+b1 libqt5gui5=5.15.2+dfsg-16 libqt5help5=5.15.2-5+b1 libqt5network5=5.15.2+dfsg-16 libqt5opengl5=5.15.2+dfsg-16 libqt5opengl5-dev=5.15.2+dfsg-16 libqt5printsupport5=5.15.2+dfsg-16 libqt5sql5=5.15.2+dfsg-16 libqt5svg5=5.15.2-4 libqt5test5=5.15.2+dfsg-16 libqt5widgets5=5.15.2+dfsg-16 libqt5xml5=5.15.2+dfsg-16 libquadmath0=12-20220319-1 librabbitmq4=0.11.0-1 libraqm0=0.7.0-4 librbio2=1:5.12.0+dfsg-1 librdmacm1=39.0-1+b1 libreadline8=8.1.2-1.2 librhash0=1.4.2-1 librsvg2-2=2.52.5+dfsg-3+b1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 librttopo-dev=1.1.0-2 librttopo1=1.1.0-2 libsasl2-2=2.1.28+dfsg-4 libsasl2-modules-db=2.1.28+dfsg-4 libseccomp2=2.5.3-2 libselinux1=3.3-1+b2 libselinux1-dev=3.3-1+b2 libsemanage-common=3.3-1 libsemanage2=3.3-1+b2 libsensors-config=1:3.6.0-7 libsensors5=1:3.6.0-7 libsepol-dev=3.3-1 libsepol2=3.3-1 libshine3=3.1.1-2 libsigsegv2=2.14-1 libsliplu1=1:5.12.0+dfsg-1 libsm-dev=2:1.2.3-1 libsm6=2:1.2.3-1 libsmartcols1=2.38-4 libsnappy1v5=1.1.8-1 libsodium23=1.0.18-1 libsoxr0=0.1.3-4 libspatialite-dev=5.0.1-2+b2 libspatialite7=5.0.1-2+b2 libspeex1=1.2.0-1 libspqr2=1:5.12.0+dfsg-1 libsqlite3-0=3.38.2-1 libsqlite3-dev=3.38.2-1 libsrt1.4-gnutls=1.4.4-4 libssh-gcrypt-4=0.9.6-2 libssh2-1=1.10.0-3 libssl-dev=1.1.1n-1 libssl1.1=1.1.1n-1 libstdc++-11-dev=11.2.0-20 libstdc++6=12-20220319-1 libsub-override-perl=0.09-2 libsuitesparse-dev=1:5.12.0+dfsg-1 libsuitesparseconfig5=1:5.12.0+dfsg-1 libsuperlu-dev=5.3.0+dfsg1-2 libsuperlu5=5.3.0+dfsg1-2 libswresample-dev=7:4.4.2-1 libswresample3=7:4.4.2-1 libswscale-dev=7:4.4.2-1 libswscale5=7:4.4.2-1 libsystemd0=250.4-1 libsz2=1.0.6-1 libtasn1-6=4.18.0-4 libtbb-dev=2020.3-1 libtbb2=2020.3-1 libtcl8.6=8.6.12+dfsg-1 libthai-data=0.1.29-1 libthai0=0.1.29-1 libtheora-dev=1.1.1+dfsg.1-15 libtheora0=1.1.1+dfsg.1-15 libtiff-dev=4.3.0-6 libtiff5=4.3.0-6 libtiffxx5=4.3.0-6 libtinfo6=6.3-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtk8.6=8.6.12-1 libtool=2.4.7-3 libtsan0=11.2.0-20 libtwolame0=0.4.0-2 libubsan1=12-20220319-1 libuchardet0=0.0.7-1 libucx0=1.12.1-1 libudev1=250.4-1 libudfread0=1.1.2-1 libumfpack5=1:5.12.0+dfsg-1 libunistring2=1.0-1 liburiparser-dev=0.9.6+dfsg-1 liburiparser1=0.9.6+dfsg-1 libutfcpp-dev=3.2.1-2 libuuid1=2.38-4 libuv1=1.44.1-2 libva-drm2=2.14.0-1 libva-x11-2=2.14.0-1 libva2=2.14.0-1 libvdpau1=1.5-1 libvorbis0a=1.3.7-1 libvorbisenc2=1.3.7-1 libvorbisfile3=1.3.7-1 libvpx7=1.11.0-2 libvtk9-dev=9.1.0+really9.1.0+dfsg2-3+b3 libvtk9-java=9.1.0+really9.1.0+dfsg2-3+b3 libvtk9.1=9.1.0+really9.1.0+dfsg2-3+b3 libvtk9.1-qt=9.1.0+really9.1.0+dfsg2-3+b3 libvulkan-dev=1.3.204.1-2 libvulkan1=1.3.204.1-2 libwacom-common=2.2.0-1 libwacom9=2.2.0-1 libwayland-client0=1.20.0-1 libwayland-server0=1.20.0-1 libwebp-dev=1.2.2-2+b1 libwebp7=1.2.2-2+b1 libwebpdemux2=1.2.2-2+b1 libwebpmux3=1.2.2-2+b1 libx11-6=2:1.7.5-1 libx11-data=2:1.7.5-1 libx11-dev=2:1.7.5-1 libx11-xcb1=2:1.7.5-1 libx264-163=2:0.163.3060+git5db6aa6-2 libx265-199=3.5-2 libx265-dev=3.5-2 libxau-dev=1:1.0.9-1 libxau6=1:1.0.9-1 libxaw7=2:1.0.14-1 libxcb-dri2-0=1.14-3 libxcb-dri3-0=1.14-3 libxcb-glx0=1.14-3 libxcb-icccm4=0.4.1-1.1 libxcb-image0=0.4.0-2 libxcb-keysyms1=0.4.0-1+b2 libxcb-present0=1.14-3 libxcb-randr0=1.14-3 libxcb-render-util0=0.3.9-1+b1 libxcb-render0=1.14-3 libxcb-shape0=1.14-3 libxcb-shm0=1.14-3 libxcb-sync1=1.14-3 libxcb-util1=0.4.0-1+b1 libxcb-xfixes0=1.14-3 libxcb-xinerama0=1.14-3 libxcb-xinput0=1.14-3 libxcb-xkb1=1.14-3 libxcb1=1.14-3 libxcb1-dev=1.14-3 libxdmcp-dev=1:1.1.2-3 libxdmcp6=1:1.1.2-3 libxerces-c-dev=3.2.3+debian-3+b1 libxerces-c3.2=3.2.3+debian-3+b1 libxext-dev=2:1.3.4-1 libxext6=2:1.3.4-1 libxfixes-dev=1:6.0.0-1 libxfixes3=1:6.0.0-1 libxft-dev=2.3.4-1 libxft2=2.3.4-1 libxi-dev=2:1.8-1 libxi6=2:1.8-1 libxkbcommon-x11-0=1.4.0-1 libxkbcommon0=1.4.0-1 libxml2=2.9.13+dfsg-1+b1 libxml2-dev=2.9.13+dfsg-1+b1 libxmu-dev=2:1.1.3-3 libxmu-headers=2:1.1.3-3 libxmu6=2:1.1.3-3 libxnvctrl0=470.103.01-2 libxpm4=1:3.5.12-1 libxrender-dev=1:0.9.10-1 libxrender1=1:0.9.10-1 libxshmfence1=1.3-1 libxslt1.1=1.1.34-4 libxss-dev=1:1.2.3-1 libxss1=1:1.2.3-1 libxt-dev=1:1.2.1-1 libxt6=1:1.2.1-1 libxtst6=2:1.2.3-1 libxvidcore4=2:1.3.7-1 libxxf86vm1=1:1.1.4-1+b2 libz3-4=4.8.12-1+b1 libzmq5=4.3.4-2 libzstd-dev=1.5.2+dfsg-1 libzstd1=1.5.2+dfsg-1 libzvbi-common=0.2.35-19 libzvbi0=0.2.35-19 linux-libc-dev=5.17.3-1 login=1:4.11.1+dfsg1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.2-1 mariadb-common=1:10.6.7-3 mawk=1.3.4.20200120-3+b1 media-types=7.1.0 mpi-default-bin=1.14 mpi-default-dev=1.14 mysql-common=5.8+1.0.8 ncurses-base=6.3-2 ncurses-bin=6.3-2 ocl-icd-libopencl1=2.2.14-3 openjdk-11-jdk=11.0.14.1+1-1 openjdk-11-jdk-headless=11.0.14.1+1-1 openjdk-11-jre=11.0.14.1+1-1 openjdk-11-jre-headless=11.0.14.1+1-1 openmpi-bin=4.1.3-2 openmpi-common=4.1.3-2 openssh-client=1:9.0p1-1 openssl=1.1.1n-1 passwd=1:4.11.1+dfsg1-2 patch=2.7.6-7 perl=5.34.0-4 perl-base=5.34.0-4 perl-modules-5.34=5.34.0-4 pkg-config=0.29.2-1 po-debconf=1.0.21+nmu1 procps=2:3.3.17-7+b1 proj-data=9.0.0-1 pyqt5-dev-tools=5.15.6+dfsg-1+b2 python-matplotlib-data=3.5.1-2 python3=3.10.4-1 python3-appdirs=1.4.4-2 python3-attr=21.2.0-1 python3-backcall=0.2.0-3 python3-brotli=1.0.9-2+b3 python3-cycler=0.11.0-1 python3-dateutil=2.8.1-6 python3-decorator=4.4.2-2 python3-dev=3.10.4-1 python3-distutils=3.9.12-1 python3-fonttools=4.32.0-1 python3-fs=2.4.12-1 python3-future=0.18.2-5 python3-ipython=7.31.1-1 python3-jedi=0.18.0-1 python3-kiwisolver=1.3.2-1+b1 python3-lib2to3=3.9.12-1 python3-lxml=4.8.0-1 python3-lz4=4.0.0+dfsg-1 python3-matplotlib=3.5.1-2+b1 python3-matplotlib-inline=0.1.3-1 python3-minieigen=0.50.3+dfsg1-13+b1 python3-minimal=3.10.4-1 python3-mpi4py=3.1.3-2 python3-mpmath=1.2.1-2 python3-numpy=1:1.21.5-1 python3-packaging=21.3-1 python3-parso=0.8.1-1 python3-pexpect=4.8.0-2 python3-pickleshare=0.7.5-5 python3-pil=9.1.0-1 python3-pil.imagetk=9.1.0-1 python3-pkg-resources=59.6.0-1.2 python3-prompt-toolkit=3.0.29-1 python3-ptyprocess=0.7.0-3 python3-pygments=2.11.2+dfsg-2 python3-pygraphviz=1.7-3+b1 python3-pyparsing=3.0.7-2 python3-pyqt5=5.15.6+dfsg-1+b2 python3-pyqt5.qtsvg=5.15.6+dfsg-1+b2 python3-pyqt5.sip=12.10.1-1 python3-scipy=1.7.3-2 python3-six=1.16.0-3 python3-sympy=1.10.1-1 python3-tk=3.9.12-1 python3-traitlets=5.1.1-1 python3-tz=2022.1-1 python3-ufolib2=0.13.1+dfsg1-1 python3-unicodedata2=14.0.0+ds-8 python3-vtk9=9.1.0+really9.1.0+dfsg2-3+b3 python3-wcwidth=0.2.5+dfsg1-1 python3-xlib=0.29-1 python3.10=3.10.4-3 python3.10-dev=3.10.4-3 python3.10-minimal=3.10.4-3 python3.9=3.9.12-1 python3.9-minimal=3.9.12-1 qt5-qmake=5.15.2+dfsg-16 qt5-qmake-bin=5.15.2+dfsg-16 qtbase5-dev=5.15.2+dfsg-16 qtbase5-dev-tools=5.15.2+dfsg-16 qtchooser=66-2 readline-common=8.1.2-1.2 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 shared-mime-info=2.1-2 sysvinit-utils=3.03-1 tar=1.34+dfsg-1 tcl=8.6.11+1 tcl-dev=8.6.11+1 tcl8.6=8.6.12+dfsg-1 tcl8.6-dev=8.6.12+dfsg-1 tk=8.6.11+1 tk-dev=8.6.11+1 tk8.6=8.6.12-1 tk8.6-blt2.5=2.5.3+dfsg-4.1 tk8.6-dev=8.6.12-1 tzdata=2022a-1 ucf=3.0043 unicode-data=14.0.0-1.1 unixodbc-common=2.3.9-5 unixodbc-dev=2.3.9-5 util-linux=2.38-4 util-linux-extra=2.38-4 uuid-dev=2.38-4 vtk9=9.1.0+really9.1.0+dfsg2-3+b3 x11-common=1:7.7+23 x11proto-dev=2022.1-1 xkb-data=2.35.1-1 xorg-sgml-doctools=1:1.11-1.1 xtrans-dev=1.4.0-1 xz-utils=5.2.5-2.1 zlib1g=1:1.2.11.dfsg-4 zlib1g-dev=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220327T025142Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220327T025142Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220425T152932Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220421T205851Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d yade=2022.01a-7 && mkdir -p /build/yade-cajvWY && dpkg-source --no-check -x /*.dsc /build/yade-cajvWY/yade-2022.01a && cd /build/yade-cajvWY/yade-2022.01a && { printf '%s' 'yade (2022.01a-7+b2) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against libicu71 -- all / amd64 / i386 Build Daemon (x86-conova-01) Sat, 23 Apr 2022 11:05:55 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/yade-cajvWY" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/yade-cajvWY/yade-2022.01a && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1650711955" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/yade-cajvWY /tmp/yade-2022.01a-7+b2e065ft6p bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220421T205851Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.UxJlPANPpL as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.UxJlPANPpL Reading package lists... Building dependency tree... util-linux is already the newest version (2.38-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 135 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220421T205851Z unstable/main amd64 libfakeroot amd64 1.28-1 [48.2 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220421T205851Z unstable/main amd64 fakeroot amd64 1.28-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 135 kB in 0s (1087 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4703 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.28-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.28-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.28-1_amd64.deb ... Unpacking fakeroot (1.28-1) ... Setting up libfakeroot:amd64 (1.28-1) ... Setting up fakeroot (1.28-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220327T025142Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220327T025142Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220425T152932Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220421T205851Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.UxJlPANPpL Get:1 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm InRelease [130 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220425T152932Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220421T205851Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main Sources [11.9 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main amd64 Packages [11.3 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220425T152932Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220425T152932Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220425T152932Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220425T152932Z unstable/main amd64 Packages [12.4 MB] Fetched 35.9 MB in 29s (1235 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.UxJlPANPpL I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d yade=2022.01a-7 && mkdir -p /build/yade-cajvWY && dpkg-source --no-check -x /*.dsc /build/yade-cajvWY/yade-2022.01a && cd /build/yade-cajvWY/yade-2022.01a && { printf '%s' 'yade (2022.01a-7+b2) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against libicu71 -- all / amd64 / i386 Build Daemon (x86-conova-01) Sat, 23 Apr 2022 11:05:55 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/yade-cajvWY"' exec /tmp/mmdebstrap.UxJlPANPpL Reading package lists... NOTICE: 'yade' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/yade.git Please use: git clone https://salsa.debian.org/science-team/yade.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 10.9 MB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main yade 2022.01a-7 (dsc) [3247 B] Get:2 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main yade 2022.01a-7 (tar) [10.8 MB] Get:3 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main yade 2022.01a-7 (asc) [833 B] Get:4 http://snapshot.notset.fr/archive/debian/20220327T025142Z bookworm/main yade 2022.01a-7 (diff) [44.9 kB] Fetched 10.9 MB in 9s (1272 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'yade_2022.01a-7.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting yade in /build/yade-cajvWY/yade-2022.01a dpkg-source: info: unpacking yade_2022.01a.orig.tar.bz2 dpkg-source: info: unpacking yade_2022.01a-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_remove_google_analytics.patch dpkg-source: info: applying 10_disable_some_tests.patch dpkg-source: info: applying 30_python310.patch dpkg-source: info: applying 817.patch dpkg-source: info: applying 820.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/yade-cajvWY/yade-2022.01a && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1650711955" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.UxJlPANPpL dpkg-buildpackage: info: source package yade dpkg-buildpackage: info: source version 2022.01a-7+b2 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by all / amd64 / i386 Build Daemon (x86-conova-01) dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dpkg-query: package 'python3-sphinx' is not installed and no information is available Use dpkg --info (= dpkg-deb --info) to examine archive files. dpkg-query: package 'python3-sphinx' is not installed and no information is available Use dpkg --info (= dpkg-deb --info) to examine archive files. dh clean --builddirectory=/build/yade-cajvWY/yade-2022.01a/debian/build --with python3 --no-parallel dh_auto_clean -O--builddirectory=/build/yade-cajvWY/yade-2022.01a/debian/build -O--no-parallel debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/yade-cajvWY/yade-2022.01a' dpkg-query: package 'python3-sphinx' is not installed and no information is available Use dpkg --info (= dpkg-deb --info) to examine archive files. dpkg-query: package 'python3-sphinx' is not installed and no information is available Use dpkg --info (= dpkg-deb --info) to examine archive files. rm -rf /build/yade-cajvWY/yade-2022.01a/debian/build-double rm -rf /build/yade-cajvWY/yade-2022.01a/debian/build-longdouble rm -rf /build/yade-cajvWY/yade-2022.01a/debian/build-float128 rm -rf /build/yade-cajvWY/yade-2022.01a/debian/build-mpfr150 rm -rf /build/yade-cajvWY/yade-2022.01a/yade.1 rm -rf /build/yade-cajvWY/yade-2022.01a/yade-batch.1 rm -rf /build/yade-cajvWY/yade-2022.01a/debian/matplotlib rm -rf /build/yade-cajvWY/yade-2022.01a/doc/sphinx/_build rm -rf /build/yade-cajvWY/yade-2022.01a/doc/sphinx/__pycache__ make[1]: Leaving directory '/build/yade-cajvWY/yade-2022.01a' dh_autoreconf_clean -O--builddirectory=/build/yade-cajvWY/yade-2022.01a/debian/build -O--no-parallel dh_clean -O--builddirectory=/build/yade-cajvWY/yade-2022.01a/debian/build -O--no-parallel debian/rules build-arch dpkg-query: package 'python3-sphinx' is not installed and no information is available Use dpkg --info (= dpkg-deb --info) to examine archive files. dpkg-query: package 'python3-sphinx' is not installed and no information is available Use dpkg --info (= dpkg-deb --info) to examine archive files. dh build-arch --builddirectory=/build/yade-cajvWY/yade-2022.01a/debian/build --with python3 --no-parallel dh_update_autotools_config -a -O--builddirectory=/build/yade-cajvWY/yade-2022.01a/debian/build -O--no-parallel dh_autoreconf -a -O--builddirectory=/build/yade-cajvWY/yade-2022.01a/debian/build -O--no-parallel debian/rules override_dh_auto_configure make[1]: Entering directory '/build/yade-cajvWY/yade-2022.01a' dpkg-query: package 'python3-sphinx' is not installed and no information is available Use dpkg --info (= dpkg-deb --info) to examine archive files. dpkg-query: package 'python3-sphinx' is not installed and no information is available Use dpkg --info (= dpkg-deb --info) to examine archive files. dh_auto_configure -- -DruntimePREFIX="/usr" -DCMAKE_INSTALL_PREFIX="/usr" -DLIBRARY_OUTPUT_PATH=lib/x86_64-linux-gnu -DENABLE_SPH=OFF -DENABLE_MPFR=ON -DPYTHON_VERSION=3 -B/build/yade-cajvWY/yade-2022.01a/debian/build-double -DSUFFIX=-double -DREAL_DECIMAL_PLACES=15 cd debian/build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DruntimePREFIX=/usr -DCMAKE_INSTALL_PREFIX=/usr -DLIBRARY_OUTPUT_PATH=lib/x86_64-linux-gnu -DENABLE_SPH=OFF -DENABLE_MPFR=ON -DPYTHON_VERSION=3 -B/build/yade-cajvWY/yade-2022.01a/debian/build-double -DSUFFIX=-double -DREAL_DECIMAL_PLACES=15 ../.. -- The C compiler identification is GNU 11.2.0 -- The CXX compiler identification is GNU 11.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Version is set to 2022.01a -- GCC Version >= 4.8. Adding -ftrack-macro-expansion=0 -- GCC Version >= 4.8. Adding -save-temps -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") -- Log filtering: enabled -- Enabling boost::log library and DEBUG=OFF. Logging will work nicely, backtraces will not have debug info, files will be small. -- Architecture: amd64 -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2") -- Checking for module 'glut' -- No package 'glut' found -- Found GLUT: /usr/lib/x86_64-linux-gnu/libglut.so -- Found freeglut: /usr/include/GL -- md5sum of freegult /usr/include/GL/freeglut_std.h is: 791a2febd8584ec530cdd7676191b6d5 -- freegult version is 2.8.1 Loop on the following python versions and check available dependencies:3.10;3.9;3.8;3.7;3.6;3.5;3.4;3.3;3.2;3.1;3.0 -- Found PythonInterp: /usr/bin/python3.10 (found version "3.10.4") Trying python version: 3.10 parsed as 3 10 Python version 3.10.4 found, try to import dependencies... Boost_VERSION=107400, adding boost_python310 lib -- Found NumPy: version "1.21.5" /usr/lib/python3/dist-packages/numpy/core/include -- Found IPython: /usr/lib/python3/dist-packages/IPython -- Found matplotlib: /usr/lib/python3/dist-packages/matplotlib -- Found pygraphviz: /usr/lib/python3/dist-packages/pygraphviz -- Found Xlib: /usr/lib/python3/dist-packages/Xlib -- Found future: /usr/lib/python3/dist-packages/future -- Found past: /usr/lib/python3/dist-packages/past -- Found tkinter: /usr/lib/python3.10/tkinter -- Boost_VERSION: 107400 -- Boost_LIB_VERSION: 1_74 -- Boost_INCLUDE_DIRS: /usr/include -- Boost_LIBRARIES: /usr/lib/x86_64-linux-gnu/libboost_python310.so/usr/lib/x86_64-linux-gnu/libboost_thread.so-lpthread/usr/lib/x86_64-linux-gnu/libboost_filesystem.so/usr/lib/x86_64-linux-gnu/libboost_iostreams.so/usr/lib/x86_64-linux-gnu/libboost_regex.so/usr/lib/x86_64-linux-gnu/libboost_serialization.so/usr/lib/x86_64-linux-gnu/libboost_system.so/usr/lib/x86_64-linux-gnu/libboost_date_time.so/usr/lib/x86_64-linux-gnu/libboost_log.so/usr/lib/x86_64-linux-gnu/libboost_chrono.so/usr/lib/x86_64-linux-gnu/libboost_atomic.so/usr/lib/x86_64-linux-gnu/libboost_log_setup.solibboost_python310.so Found all python dependencies with version 3.10.4, will compile yade with that. -- Almost all useful errors are enabled and it is g++ version 11.2.0  -- Except for this one g++ bug https://gcc.gnu.org/bugzilla/show_bug.cgi?id=53431#c34 , so we add -Wno-comment -- Determining preferred precision of Real numbers -- Will now try to find python-mpmath using /usr/bin/python3.10 -- Enabling RealHP, double, quadruple and more precisions are available: RealHP for N ∈ {1,2,3,4,8,10,20}. See file lib/high-precision/RealHPConfig.hpp -- python-mpmath found, version: 1.2.1 -- Will now try to find MPFR library https://www.mpfr.org, debian package libmpfr-dev -- Found MPFR: /usr/include (Required is at least version "1.0.0") -- Checking /usr/include/mpreal.h provided by package libmpfrc++-dev -- Will now try to find MPC library http://www.multiprecision.org/mpc/, debian package libmpc-dev -- Found MPC: /usr/include (Required is at least version "1.0.0") -- MPFR enabled, version: 4.1.0, linking with /usr/lib/x86_64-linux-gnu/libmpfr.so -- MPC version 1.2.1 found in /usr/include -- Will use PrecisionDouble as Real type with 15 decimal places precision and use 64 bits of storage. -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Found Eigen3, version: 3.4.0 -- Disable vectorization CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOParallelXML' component is 'IOParallelXML' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkCommonCore' component is 'CommonCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOImage' component is 'IOImage' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOXML' component is 'IOXML' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersCore' component is 'FiltersCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingCore' component is 'ImagingCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkRenderingCore' component is 'RenderingCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingGeneral' component is 'ImagingGeneral' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingHybrid' component is 'ImagingHybrid' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersGeneral' component is 'FiltersGeneral' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersSources' component is 'FiltersSources' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) -- Found Threads: TRUE -- Found PNG: /usr/lib/x86_64-linux-gnu/libpng.so (found version "1.6.37") -- Found EXPAT: /usr/lib/x86_64-linux-gnu/libexpat.so (found version "2.4.8") -- Found double-conversion: /usr/lib/x86_64-linux-gnu/libdouble-conversion.so -- Found LZ4: /usr/lib/x86_64-linux-gnu/liblz4.so (found version "1.9.3") -- Found LZMA: /usr/lib/x86_64-linux-gnu/liblzma.so (found version "5.2.5") -- Found JPEG: /usr/lib/x86_64-linux-gnu/libjpeg.so (found version "62") -- Found TIFF: /usr/lib/x86_64-linux-gnu/libtiff.so (found version "4.3.0") -- Found utf8cpp: /usr/include/utf8cpp -- Found VTK -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found OpenMP -- GSL using pkgconfig -- WARNING: you are using the obsolete 'PKGCONFIG' macro, use FindPkgConfig CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (PkgConfig) does not match the name of the calling package (glib2). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /usr/share/cmake-3.23/Modules/FindPkgConfig.cmake:99 (find_package_handle_standard_args) cMake/Findglib2.cmake:30 (INCLUDE) CMakeLists.txt:797 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Checking for one of the modules 'glib-2.0' -- Found GLib2: glib-2.0 /usr/include/glib-2.0;/usr/lib/x86_64-linux-gnu/glib-2.0/include -- Looking for include file glib/gregex.h -- Looking for include file glib/gregex.h - not found -- Found GTS CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindOpenGL.cmake:315 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/lib/x86_64-linux-gnu/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/lib/x86_64-linux-gnu/libOpenGL.so OPENGL_glx_LIBRARY: /usr/lib/x86_64-linux-gnu/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): CMakeLists.txt:815 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found OpenGL: /usr/lib/x86_64-linux-gnu/libOpenGL.so -- Checking for module 'glut' -- No package 'glut' found CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (FREEGLUT) does not match the name of the calling package (FreeGlut). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cMake/FindFreeGlut.cmake:14 (FIND_PACKAGE_HANDLE_STANDARD_ARGS) CMakeLists.txt:818 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found FREEGLUT: /usr/include/GL -- USE QT5 -- Found QGLVIEWER-qt5: /usr/include/QGLViewer -- Found QT5 -- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Found GMP: /usr/include/x86_64-linux-gnu -- Found CGAL: /usr/include, CGAL_LIBRARIES-NOTFOUND -- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Found CGAL -- Using typical suitesparse path /usr -- SuiteSparse version 5.12.0 found, CHOLMOD direct solver for CPU activated. -- Found Cholmod: /usr/lib/x86_64-linux-gnu/libcholmod.so -- Found OpenBlas: /usr/lib/x86_64-linux-gnu/libopenblas.so -- BLAS_INCLUDE_DIR=/usr/include/x86_64-linux-gnu -- Found Metis: /usr/include -- Found Cholmod in /usr/lib/x86_64-linux-gnu/libcholmod.so -- Found OpenBlas in /usr/lib/x86_64-linux-gnu/libopenblas.so -- Found Metis in /usr/lib/x86_64-linux-gnu/libmetis.so -- Found MPI_C: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Found MPI4PY: /usr/lib/python3/dist-packages/mpi4py/include -- MPI found -- Found GL2PS: /usr/lib/x86_64-linux-gnu/libgl2ps.so -- Found GL2PS LBMFLOW is still experimental, building and running LBM engine are at your own risk! -- BLAS_INCLUDE_DIR=/usr/include/x86_64-linux-gnu -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib/x86_64-linux-gnu/libopenblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib/x86_64-linux-gnu/libopenblas.so;-lpthread;-lm;-ldl -- Found OpenBlas -- Found Lapack -- CLP not found. -- BLAS_INCLUDE_DIR=/usr/include/x86_64-linux-gnu -- CLP NOT found -- WARNING: coinutils version older than 2.11.3. Falling back to C++14. Yade will be installed to /usr -- Suffix is set to -double -- LIBRARY_OUTPUT_PATH is set to lib/x86_64-linux-gnu -- runtimePREFIX is set to /usr -- Could NOT find gts (missing: PY_gts) -- Use embedded version of gts. Please, consider installing the corresponding package -- linking -lquadmath -- pkg: + common + dem + fem + lbm + levelSet + openfoam + pfv + polyhedra + potential -- preprocessing: + dem + potential -- postprocessing: + image + vtk -- =========================================================== -- Yade configured with following features: LOGGER USEFUL_ERRORS REAL_HP COMPLEX_MP MPFR MPC VTK OPENMP GTS QT5 CGAL PFVFLOW PFVFLOW LINSOLV MPI TWOPHASEFLOW LS_DEM FEMLIKE GL2PS LBMFLOW THERMAL PARTIALSAT POTENTIAL_PARTICLES -- Disabled features: ASAN CHOLMOD_GPU SPH DEFORM LIQMIGRATION MASK_ARBITRARY PROFILING POTENTIAL_BLOCKS -- Using MAX_LOG_LEVEL=5, ENABLE_LOGGER=ON -- Optimized build -- C++ standard version: 14 -- =========================================================== -- CMAKE_CXX_FLAGS =  -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DFLOW_ENGINE -DFLOW_ENGINE -DLINSOLV -pthread -DYADE_MPI -DTWOPHASEFLOW -DYADE_GL2PS -DLBM_ENGINE -DTHERMAL -DPARTIALSAT -- CMAKE_CXX_FLAGS_RELEASE =  -O3 -DNDEBUG -- CMAKE_CXX_FLAGS_DEBUG =  -g -- =========================================================== -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_RUNSTATEDIR -- Build files have been written to: /build/yade-cajvWY/yade-2022.01a/debian/build-double dh_auto_configure -- -DruntimePREFIX="/usr" -DCMAKE_INSTALL_PREFIX="/usr" -DLIBRARY_OUTPUT_PATH=lib/x86_64-linux-gnu -DENABLE_SPH=OFF -DENABLE_MPFR=ON -DPYTHON_VERSION=3 -B/build/yade-cajvWY/yade-2022.01a/debian/build-longdouble -DSUFFIX=-longdouble -DREAL_DECIMAL_PLACES=18 cd debian/build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DruntimePREFIX=/usr -DCMAKE_INSTALL_PREFIX=/usr -DLIBRARY_OUTPUT_PATH=lib/x86_64-linux-gnu -DENABLE_SPH=OFF -DENABLE_MPFR=ON -DPYTHON_VERSION=3 -B/build/yade-cajvWY/yade-2022.01a/debian/build-longdouble -DSUFFIX=-longdouble -DREAL_DECIMAL_PLACES=18 ../.. -- The C compiler identification is GNU 11.2.0 -- The CXX compiler identification is GNU 11.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Version is set to 2022.01a -- GCC Version >= 4.8. Adding -ftrack-macro-expansion=0 -- GCC Version >= 4.8. Adding -save-temps -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") -- Log filtering: enabled -- Enabling boost::log library and DEBUG=OFF. Logging will work nicely, backtraces will not have debug info, files will be small. -- Architecture: amd64 -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2") -- Checking for module 'glut' -- No package 'glut' found -- Found GLUT: /usr/lib/x86_64-linux-gnu/libglut.so -- Found freeglut: /usr/include/GL -- md5sum of freegult /usr/include/GL/freeglut_std.h is: 791a2febd8584ec530cdd7676191b6d5 -- freegult version is 2.8.1 Loop on the following python versions and check available dependencies:3.10;3.9;3.8;3.7;3.6;3.5;3.4;3.3;3.2;3.1;3.0 -- Found PythonInterp: /usr/bin/python3.10 (found version "3.10.4") Trying python version: 3.10 parsed as 3 10 Python version 3.10.4 found, try to import dependencies... Boost_VERSION=107400, adding boost_python310 lib -- Found NumPy: version "1.21.5" /usr/lib/python3/dist-packages/numpy/core/include -- Found IPython: /usr/lib/python3/dist-packages/IPython -- Found matplotlib: /usr/lib/python3/dist-packages/matplotlib -- Found pygraphviz: /usr/lib/python3/dist-packages/pygraphviz -- Found Xlib: /usr/lib/python3/dist-packages/Xlib -- Found future: /usr/lib/python3/dist-packages/future -- Found past: /usr/lib/python3/dist-packages/past -- Found tkinter: /usr/lib/python3.10/tkinter -- Boost_VERSION: 107400 -- Boost_LIB_VERSION: 1_74 -- Boost_INCLUDE_DIRS: /usr/include -- Boost_LIBRARIES: /usr/lib/x86_64-linux-gnu/libboost_python310.so/usr/lib/x86_64-linux-gnu/libboost_thread.so-lpthread/usr/lib/x86_64-linux-gnu/libboost_filesystem.so/usr/lib/x86_64-linux-gnu/libboost_iostreams.so/usr/lib/x86_64-linux-gnu/libboost_regex.so/usr/lib/x86_64-linux-gnu/libboost_serialization.so/usr/lib/x86_64-linux-gnu/libboost_system.so/usr/lib/x86_64-linux-gnu/libboost_date_time.so/usr/lib/x86_64-linux-gnu/libboost_log.so/usr/lib/x86_64-linux-gnu/libboost_chrono.so/usr/lib/x86_64-linux-gnu/libboost_atomic.so/usr/lib/x86_64-linux-gnu/libboost_log_setup.solibboost_python310.so Found all python dependencies with version 3.10.4, will compile yade with that. -- Almost all useful errors are enabled and it is g++ version 11.2.0  -- Except for this one g++ bug https://gcc.gnu.org/bugzilla/show_bug.cgi?id=53431#c34 , so we add -Wno-comment -- Determining preferred precision of Real numbers -- Will now try to find python-mpmath using /usr/bin/python3.10 -- Enabling RealHP, double, quadruple and more precisions are available: RealHP for N ∈ {1,2,3,4,8,10,20}. See file lib/high-precision/RealHPConfig.hpp -- python-mpmath found, version: 1.2.1 -- Checking compiler version for PrecisionLongDouble -- Will now try to find MPFR library https://www.mpfr.org, debian package libmpfr-dev -- Found MPFR: /usr/include (Required is at least version "1.0.0") -- Checking /usr/include/mpreal.h provided by package libmpfrc++-dev -- Will now try to find MPC library http://www.multiprecision.org/mpc/, debian package libmpc-dev -- Found MPC: /usr/include (Required is at least version "1.0.0") -- MPFR enabled, version: 4.1.0, linking with /usr/lib/x86_64-linux-gnu/libmpfr.so -- MPC version 1.2.1 found in /usr/include -- Will use PrecisionLongDouble as Real type with 18 decimal places precision and use 80 bits of storage. -- ENABLE_TWOPHASEFLOW OR ENABLE_LINSOLV OR ENABLE_PFVFLOW pr ENABLE_PARTIALSAT were disabled automatically because they use double precision external library: cholesky linear solver. It can be replaced with native Eigen solvers, then it will work. -- ENABLE_LS_DEM automatically modified to OFF since you can not ask for both LS_DEM feature and a non-double numeric precision (e.g. REAL_* options). -- ENABLE_POTENTIAL_BLOCKS was disabled because external library coinor can only work with double type. -- ENABLE_MPI was disabled because it hasn't been tested. It is possible that a pure python-only library will correctly send mpmath.mpf(…) high precision Real type over network, but this was not tested. -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Found Eigen3, version: 3.4.0 -- Disable vectorization CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOParallelXML' component is 'IOParallelXML' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkCommonCore' component is 'CommonCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOImage' component is 'IOImage' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOXML' component is 'IOXML' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersCore' component is 'FiltersCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingCore' component is 'ImagingCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkRenderingCore' component is 'RenderingCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingGeneral' component is 'ImagingGeneral' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingHybrid' component is 'ImagingHybrid' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersGeneral' component is 'FiltersGeneral' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersSources' component is 'FiltersSources' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) -- Found Threads: TRUE -- Found PNG: /usr/lib/x86_64-linux-gnu/libpng.so (found version "1.6.37") -- Found EXPAT: /usr/lib/x86_64-linux-gnu/libexpat.so (found version "2.4.8") -- Found double-conversion: /usr/lib/x86_64-linux-gnu/libdouble-conversion.so -- Found LZ4: /usr/lib/x86_64-linux-gnu/liblz4.so (found version "1.9.3") -- Found LZMA: /usr/lib/x86_64-linux-gnu/liblzma.so (found version "5.2.5") -- Found JPEG: /usr/lib/x86_64-linux-gnu/libjpeg.so (found version "62") -- Found TIFF: /usr/lib/x86_64-linux-gnu/libtiff.so (found version "4.3.0") -- Found utf8cpp: /usr/include/utf8cpp -- Found VTK -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found OpenMP -- GSL using pkgconfig -- WARNING: you are using the obsolete 'PKGCONFIG' macro, use FindPkgConfig CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (PkgConfig) does not match the name of the calling package (glib2). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /usr/share/cmake-3.23/Modules/FindPkgConfig.cmake:99 (find_package_handle_standard_args) cMake/Findglib2.cmake:30 (INCLUDE) CMakeLists.txt:797 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Checking for one of the modules 'glib-2.0' -- Found GLib2: glib-2.0 /usr/include/glib-2.0;/usr/lib/x86_64-linux-gnu/glib-2.0/include -- Looking for include file glib/gregex.h -- Looking for include file glib/gregex.h - not found -- Found GTS CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindOpenGL.cmake:315 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/lib/x86_64-linux-gnu/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/lib/x86_64-linux-gnu/libOpenGL.so OPENGL_glx_LIBRARY: /usr/lib/x86_64-linux-gnu/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): CMakeLists.txt:815 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found OpenGL: /usr/lib/x86_64-linux-gnu/libOpenGL.so -- Checking for module 'glut' -- No package 'glut' found CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (FREEGLUT) does not match the name of the calling package (FreeGlut). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cMake/FindFreeGlut.cmake:14 (FIND_PACKAGE_HANDLE_STANDARD_ARGS) CMakeLists.txt:818 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found FREEGLUT: /usr/include/GL -- USE QT5 -- Found QGLVIEWER-qt5: /usr/include/QGLViewer -- Found QT5 -- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Found GMP: /usr/include/x86_64-linux-gnu -- Found CGAL: /usr/include, CGAL_LIBRARIES-NOTFOUND -- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Found CGAL -- Found GL2PS: /usr/lib/x86_64-linux-gnu/libgl2ps.so -- Found GL2PS LBMFLOW is still experimental, building and running LBM engine are at your own risk! -- Found OpenBlas: /usr/lib/x86_64-linux-gnu/libopenblas.so -- BLAS_INCLUDE_DIR=/usr/include/x86_64-linux-gnu -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib/x86_64-linux-gnu/libopenblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib/x86_64-linux-gnu/libopenblas.so;-lpthread;-lm;-ldl -- Found OpenBlas -- Found Lapack Yade will be installed to /usr -- Suffix is set to -longdouble -- LIBRARY_OUTPUT_PATH is set to lib/x86_64-linux-gnu -- runtimePREFIX is set to /usr -- Could NOT find gts (missing: PY_gts) -- Use embedded version of gts. Please, consider installing the corresponding package -- linking -lquadmath -- pkg: + common + dem + fem + lbm + levelSet + openfoam + pfv + polyhedra + potential -- preprocessing: + dem + potential -- postprocessing: + image + vtk -- =========================================================== -- Yade configured with following features: LOGGER USEFUL_ERRORS REAL_HP COMPLEX_MP MPFR MPC VTK OPENMP GTS QT5 CGAL FEMLIKE GL2PS LBMFLOW POTENTIAL_PARTICLES -- Disabled features: ASAN PFVFLOW PFVFLOW LINSOLV MPI TWOPHASEFLOW SPH LS_DEM DEFORM LIQMIGRATION MASK_ARBITRARY THERMAL PARTIALSAT PROFILING POTENTIAL_BLOCKS -- Using MAX_LOG_LEVEL=5, ENABLE_LOGGER=ON -- Optimized build -- C++ standard version: 17 -- =========================================================== -- CMAKE_CXX_FLAGS =  -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DYADE_GL2PS -DLBM_ENGINE -- CMAKE_CXX_FLAGS_RELEASE =  -O3 -DNDEBUG -- CMAKE_CXX_FLAGS_DEBUG =  -g -- =========================================================== -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_RUNSTATEDIR -- Build files have been written to: /build/yade-cajvWY/yade-2022.01a/debian/build-longdouble dh_auto_configure -- -DruntimePREFIX="/usr" -DCMAKE_INSTALL_PREFIX="/usr" -DLIBRARY_OUTPUT_PATH=lib/x86_64-linux-gnu -DENABLE_SPH=OFF -DENABLE_MPFR=ON -DPYTHON_VERSION=3 -B/build/yade-cajvWY/yade-2022.01a/debian/build-float128 -DSUFFIX=-float128 -DREAL_DECIMAL_PLACES=33 cd debian/build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DruntimePREFIX=/usr -DCMAKE_INSTALL_PREFIX=/usr -DLIBRARY_OUTPUT_PATH=lib/x86_64-linux-gnu -DENABLE_SPH=OFF -DENABLE_MPFR=ON -DPYTHON_VERSION=3 -B/build/yade-cajvWY/yade-2022.01a/debian/build-float128 -DSUFFIX=-float128 -DREAL_DECIMAL_PLACES=33 ../.. -- The C compiler identification is GNU 11.2.0 -- The CXX compiler identification is GNU 11.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Version is set to 2022.01a -- GCC Version >= 4.8. Adding -ftrack-macro-expansion=0 -- GCC Version >= 4.8. Adding -save-temps -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") -- Log filtering: enabled -- Enabling boost::log library and DEBUG=OFF. Logging will work nicely, backtraces will not have debug info, files will be small. -- Architecture: amd64 -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2") -- Checking for module 'glut' -- No package 'glut' found -- Found GLUT: /usr/lib/x86_64-linux-gnu/libglut.so -- Found freeglut: /usr/include/GL -- md5sum of freegult /usr/include/GL/freeglut_std.h is: 791a2febd8584ec530cdd7676191b6d5 -- freegult version is 2.8.1 Loop on the following python versions and check available dependencies:3.10;3.9;3.8;3.7;3.6;3.5;3.4;3.3;3.2;3.1;3.0 -- Found PythonInterp: /usr/bin/python3.10 (found version "3.10.4") Trying python version: 3.10 parsed as 3 10 Python version 3.10.4 found, try to import dependencies... Boost_VERSION=107400, adding boost_python310 lib -- Found NumPy: version "1.21.5" /usr/lib/python3/dist-packages/numpy/core/include -- Found IPython: /usr/lib/python3/dist-packages/IPython -- Found matplotlib: /usr/lib/python3/dist-packages/matplotlib -- Found pygraphviz: /usr/lib/python3/dist-packages/pygraphviz -- Found Xlib: /usr/lib/python3/dist-packages/Xlib -- Found future: /usr/lib/python3/dist-packages/future -- Found past: /usr/lib/python3/dist-packages/past -- Found tkinter: /usr/lib/python3.10/tkinter -- Boost_VERSION: 107400 -- Boost_LIB_VERSION: 1_74 -- Boost_INCLUDE_DIRS: /usr/include -- Boost_LIBRARIES: /usr/lib/x86_64-linux-gnu/libboost_python310.so/usr/lib/x86_64-linux-gnu/libboost_thread.so-lpthread/usr/lib/x86_64-linux-gnu/libboost_filesystem.so/usr/lib/x86_64-linux-gnu/libboost_iostreams.so/usr/lib/x86_64-linux-gnu/libboost_regex.so/usr/lib/x86_64-linux-gnu/libboost_serialization.so/usr/lib/x86_64-linux-gnu/libboost_system.so/usr/lib/x86_64-linux-gnu/libboost_date_time.so/usr/lib/x86_64-linux-gnu/libboost_log.so/usr/lib/x86_64-linux-gnu/libboost_chrono.so/usr/lib/x86_64-linux-gnu/libboost_atomic.so/usr/lib/x86_64-linux-gnu/libboost_log_setup.solibboost_python310.so Found all python dependencies with version 3.10.4, will compile yade with that. -- Almost all useful errors are enabled and it is g++ version 11.2.0  -- Except for this one g++ bug https://gcc.gnu.org/bugzilla/show_bug.cgi?id=53431#c34 , so we add -Wno-comment -- Determining preferred precision of Real numbers -- Will now try to find python-mpmath using /usr/bin/python3.10 -- Enabling RealHP, double, quadruple and more precisions are available: RealHP for N ∈ {1,2,3,4,8,10,20}. See file lib/high-precision/RealHPConfig.hpp -- python-mpmath found, version: 1.2.1 -- Checking compiler version for PrecisionFloat128 -- Will now try to find MPFR library https://www.mpfr.org, debian package libmpfr-dev -- Found MPFR: /usr/include (Required is at least version "1.0.0") -- Checking /usr/include/mpreal.h provided by package libmpfrc++-dev -- Will now try to find MPC library http://www.multiprecision.org/mpc/, debian package libmpc-dev -- Found MPC: /usr/include (Required is at least version "1.0.0") -- MPFR enabled, version: 4.1.0, linking with /usr/lib/x86_64-linux-gnu/libmpfr.so -- MPC version 1.2.1 found in /usr/include -- Will use PrecisionFloat128 as Real type with 33 decimal places precision and use 128 bits of storage. -- ENABLE_TWOPHASEFLOW OR ENABLE_LINSOLV OR ENABLE_PFVFLOW pr ENABLE_PARTIALSAT were disabled automatically because they use double precision external library: cholesky linear solver. It can be replaced with native Eigen solvers, then it will work. -- ENABLE_LS_DEM automatically modified to OFF since you can not ask for both LS_DEM feature and a non-double numeric precision (e.g. REAL_* options). -- ENABLE_POTENTIAL_BLOCKS was disabled because external library coinor can only work with double type. -- ENABLE_MPI was disabled because it hasn't been tested. It is possible that a pure python-only library will correctly send mpmath.mpf(…) high precision Real type over network, but this was not tested. -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Found Eigen3, version: 3.4.0 -- Disable vectorization CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOParallelXML' component is 'IOParallelXML' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkCommonCore' component is 'CommonCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOImage' component is 'IOImage' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOXML' component is 'IOXML' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersCore' component is 'FiltersCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingCore' component is 'ImagingCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkRenderingCore' component is 'RenderingCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingGeneral' component is 'ImagingGeneral' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingHybrid' component is 'ImagingHybrid' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersGeneral' component is 'FiltersGeneral' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersSources' component is 'FiltersSources' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) -- Found Threads: TRUE -- Found PNG: /usr/lib/x86_64-linux-gnu/libpng.so (found version "1.6.37") -- Found EXPAT: /usr/lib/x86_64-linux-gnu/libexpat.so (found version "2.4.8") -- Found double-conversion: /usr/lib/x86_64-linux-gnu/libdouble-conversion.so -- Found LZ4: /usr/lib/x86_64-linux-gnu/liblz4.so (found version "1.9.3") -- Found LZMA: /usr/lib/x86_64-linux-gnu/liblzma.so (found version "5.2.5") -- Found JPEG: /usr/lib/x86_64-linux-gnu/libjpeg.so (found version "62") -- Found TIFF: /usr/lib/x86_64-linux-gnu/libtiff.so (found version "4.3.0") -- Found utf8cpp: /usr/include/utf8cpp -- Found VTK -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found OpenMP -- GSL using pkgconfig -- WARNING: you are using the obsolete 'PKGCONFIG' macro, use FindPkgConfig CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (PkgConfig) does not match the name of the calling package (glib2). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /usr/share/cmake-3.23/Modules/FindPkgConfig.cmake:99 (find_package_handle_standard_args) cMake/Findglib2.cmake:30 (INCLUDE) CMakeLists.txt:797 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Checking for one of the modules 'glib-2.0' -- Found GLib2: glib-2.0 /usr/include/glib-2.0;/usr/lib/x86_64-linux-gnu/glib-2.0/include -- Looking for include file glib/gregex.h -- Looking for include file glib/gregex.h - not found -- Found GTS CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindOpenGL.cmake:315 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/lib/x86_64-linux-gnu/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/lib/x86_64-linux-gnu/libOpenGL.so OPENGL_glx_LIBRARY: /usr/lib/x86_64-linux-gnu/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): CMakeLists.txt:815 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found OpenGL: /usr/lib/x86_64-linux-gnu/libOpenGL.so -- Checking for module 'glut' -- No package 'glut' found CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (FREEGLUT) does not match the name of the calling package (FreeGlut). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cMake/FindFreeGlut.cmake:14 (FIND_PACKAGE_HANDLE_STANDARD_ARGS) CMakeLists.txt:818 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found FREEGLUT: /usr/include/GL -- USE QT5 -- Found QGLVIEWER-qt5: /usr/include/QGLViewer -- Found QT5 -- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Found GMP: /usr/include/x86_64-linux-gnu -- Found CGAL: /usr/include, CGAL_LIBRARIES-NOTFOUND -- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Found CGAL -- Found GL2PS: /usr/lib/x86_64-linux-gnu/libgl2ps.so -- Found GL2PS LBMFLOW is still experimental, building and running LBM engine are at your own risk! -- Found OpenBlas: /usr/lib/x86_64-linux-gnu/libopenblas.so -- BLAS_INCLUDE_DIR=/usr/include/x86_64-linux-gnu -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib/x86_64-linux-gnu/libopenblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib/x86_64-linux-gnu/libopenblas.so;-lpthread;-lm;-ldl -- Found OpenBlas -- Found Lapack Yade will be installed to /usr -- Suffix is set to -float128 -- LIBRARY_OUTPUT_PATH is set to lib/x86_64-linux-gnu -- runtimePREFIX is set to /usr -- Could NOT find gts (missing: PY_gts) -- Use embedded version of gts. Please, consider installing the corresponding package -- linking -lquadmath -- pkg: + common + dem + fem + lbm + levelSet + openfoam + pfv + polyhedra + potential -- preprocessing: + dem + potential -- postprocessing: + image + vtk -- =========================================================== -- Yade configured with following features: LOGGER USEFUL_ERRORS REAL_HP COMPLEX_MP MPFR MPC VTK OPENMP GTS QT5 CGAL FEMLIKE GL2PS LBMFLOW POTENTIAL_PARTICLES -- Disabled features: ASAN PFVFLOW PFVFLOW LINSOLV MPI TWOPHASEFLOW SPH LS_DEM DEFORM LIQMIGRATION MASK_ARBITRARY THERMAL PARTIALSAT PROFILING POTENTIAL_BLOCKS -- Using MAX_LOG_LEVEL=5, ENABLE_LOGGER=ON -- Optimized build -- C++ standard version: 17 -- =========================================================== -- CMAKE_CXX_FLAGS =  -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DYADE_GL2PS -DLBM_ENGINE -- CMAKE_CXX_FLAGS_RELEASE =  -O3 -DNDEBUG -- CMAKE_CXX_FLAGS_DEBUG =  -g -- =========================================================== -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_RUNSTATEDIR -- Build files have been written to: /build/yade-cajvWY/yade-2022.01a/debian/build-float128 dh_auto_configure -- -DruntimePREFIX="/usr" -DCMAKE_INSTALL_PREFIX="/usr" -DLIBRARY_OUTPUT_PATH=lib/x86_64-linux-gnu -DENABLE_SPH=OFF -DENABLE_MPFR=ON -DPYTHON_VERSION=3 -B/build/yade-cajvWY/yade-2022.01a/debian/build-mpfr150 -DSUFFIX=-mpfr150 -DREAL_DECIMAL_PLACES=150 cd debian/build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DruntimePREFIX=/usr -DCMAKE_INSTALL_PREFIX=/usr -DLIBRARY_OUTPUT_PATH=lib/x86_64-linux-gnu -DENABLE_SPH=OFF -DENABLE_MPFR=ON -DPYTHON_VERSION=3 -B/build/yade-cajvWY/yade-2022.01a/debian/build-mpfr150 -DSUFFIX=-mpfr150 -DREAL_DECIMAL_PLACES=150 ../.. -- The C compiler identification is GNU 11.2.0 -- The CXX compiler identification is GNU 11.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Version is set to 2022.01a -- GCC Version >= 4.8. Adding -ftrack-macro-expansion=0 -- GCC Version >= 4.8. Adding -save-temps -- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") -- Log filtering: enabled -- Enabling boost::log library and DEBUG=OFF. Logging will work nicely, backtraces will not have debug info, files will be small. -- Architecture: amd64 -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2") -- Checking for module 'glut' -- No package 'glut' found -- Found GLUT: /usr/lib/x86_64-linux-gnu/libglut.so -- Found freeglut: /usr/include/GL -- md5sum of freegult /usr/include/GL/freeglut_std.h is: 791a2febd8584ec530cdd7676191b6d5 -- freegult version is 2.8.1 Loop on the following python versions and check available dependencies:3.10;3.9;3.8;3.7;3.6;3.5;3.4;3.3;3.2;3.1;3.0 -- Found PythonInterp: /usr/bin/python3.10 (found version "3.10.4") Trying python version: 3.10 parsed as 3 10 Python version 3.10.4 found, try to import dependencies... Boost_VERSION=107400, adding boost_python310 lib -- Found NumPy: version "1.21.5" /usr/lib/python3/dist-packages/numpy/core/include -- Found IPython: /usr/lib/python3/dist-packages/IPython -- Found matplotlib: /usr/lib/python3/dist-packages/matplotlib -- Found pygraphviz: /usr/lib/python3/dist-packages/pygraphviz -- Found Xlib: /usr/lib/python3/dist-packages/Xlib -- Found future: /usr/lib/python3/dist-packages/future -- Found past: /usr/lib/python3/dist-packages/past -- Found tkinter: /usr/lib/python3.10/tkinter -- Boost_VERSION: 107400 -- Boost_LIB_VERSION: 1_74 -- Boost_INCLUDE_DIRS: /usr/include -- Boost_LIBRARIES: /usr/lib/x86_64-linux-gnu/libboost_python310.so/usr/lib/x86_64-linux-gnu/libboost_thread.so-lpthread/usr/lib/x86_64-linux-gnu/libboost_filesystem.so/usr/lib/x86_64-linux-gnu/libboost_iostreams.so/usr/lib/x86_64-linux-gnu/libboost_regex.so/usr/lib/x86_64-linux-gnu/libboost_serialization.so/usr/lib/x86_64-linux-gnu/libboost_system.so/usr/lib/x86_64-linux-gnu/libboost_date_time.so/usr/lib/x86_64-linux-gnu/libboost_log.so/usr/lib/x86_64-linux-gnu/libboost_chrono.so/usr/lib/x86_64-linux-gnu/libboost_atomic.so/usr/lib/x86_64-linux-gnu/libboost_log_setup.solibboost_python310.so Found all python dependencies with version 3.10.4, will compile yade with that. -- Almost all useful errors are enabled and it is g++ version 11.2.0  -- Except for this one g++ bug https://gcc.gnu.org/bugzilla/show_bug.cgi?id=53431#c34 , so we add -Wno-comment -- Determining preferred precision of Real numbers -- Real type will use mpfr precision. -- Will now try to find python-mpmath using /usr/bin/python3.10 -- Enabling RealHP, double, quadruple and more precisions are available: RealHP for N ∈ {1,2,3,4,8,10,20}. See file lib/high-precision/RealHPConfig.hpp -- python-mpmath found, version: 1.2.1 -- Checking compiler version for PrecisionMpfr150 -- Will now try to find MPFR library https://www.mpfr.org, debian package libmpfr-dev -- Found MPFR: /usr/include (Required is at least version "1.0.0") -- Checking /usr/include/mpreal.h provided by package libmpfrc++-dev -- Will now try to find MPC library http://www.multiprecision.org/mpc/, debian package libmpc-dev -- Found MPC: /usr/include (Required is at least version "1.0.0") -- MPFR enabled, version: 4.1.0, linking with /usr/lib/x86_64-linux-gnu/libmpfr.so -- MPC version 1.2.1 found in /usr/include -- Will use PrecisionMpfr150 as Real type with 150 decimal places precision and use 498 bits of storage. -- ENABLE_TWOPHASEFLOW OR ENABLE_LINSOLV OR ENABLE_PFVFLOW pr ENABLE_PARTIALSAT were disabled automatically because they use double precision external library: cholesky linear solver. It can be replaced with native Eigen solvers, then it will work. -- ENABLE_LS_DEM automatically modified to OFF since you can not ask for both LS_DEM feature and a non-double numeric precision (e.g. REAL_* options). -- ENABLE_POTENTIAL_BLOCKS was disabled because external library coinor can only work with double type. -- ENABLE_MPI was disabled because it hasn't been tested. It is possible that a pure python-only library will correctly send mpmath.mpf(…) high precision Real type over network, but this was not tested. -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Found Eigen3, version: 3.4.0 -- Disable vectorization CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOParallelXML' component is 'IOParallelXML' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkCommonCore' component is 'CommonCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOImage' component is 'IOImage' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkIOXML' component is 'IOXML' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersCore' component is 'FiltersCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingCore' component is 'ImagingCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkRenderingCore' component is 'RenderingCore' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingGeneral' component is 'ImagingGeneral' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkImagingHybrid' component is 'ImagingHybrid' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersGeneral' component is 'FiltersGeneral' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) CMake Deprecation Warning at /usr/lib/x86_64-linux-gnu/cmake/vtk-9.1/vtk-config.cmake:75 (message): The new name for the 'vtkFiltersSources' component is 'FiltersSources' Call Stack (most recent call first): CMakeLists.txt:758 (FIND_PACKAGE) -- Found Threads: TRUE -- Found PNG: /usr/lib/x86_64-linux-gnu/libpng.so (found version "1.6.37") -- Found EXPAT: /usr/lib/x86_64-linux-gnu/libexpat.so (found version "2.4.8") -- Found double-conversion: /usr/lib/x86_64-linux-gnu/libdouble-conversion.so -- Found LZ4: /usr/lib/x86_64-linux-gnu/liblz4.so (found version "1.9.3") -- Found LZMA: /usr/lib/x86_64-linux-gnu/liblzma.so (found version "5.2.5") -- Found JPEG: /usr/lib/x86_64-linux-gnu/libjpeg.so (found version "62") -- Found TIFF: /usr/lib/x86_64-linux-gnu/libtiff.so (found version "4.3.0") -- Found utf8cpp: /usr/include/utf8cpp -- Found VTK -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found OpenMP -- GSL using pkgconfig -- WARNING: you are using the obsolete 'PKGCONFIG' macro, use FindPkgConfig CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (PkgConfig) does not match the name of the calling package (glib2). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): /usr/share/cmake-3.23/Modules/FindPkgConfig.cmake:99 (find_package_handle_standard_args) cMake/Findglib2.cmake:30 (INCLUDE) CMakeLists.txt:797 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Checking for one of the modules 'glib-2.0' -- Found GLib2: glib-2.0 /usr/include/glib-2.0;/usr/lib/x86_64-linux-gnu/glib-2.0/include -- Looking for include file glib/gregex.h -- Looking for include file glib/gregex.h - not found -- Found GTS CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindOpenGL.cmake:315 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/lib/x86_64-linux-gnu/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/lib/x86_64-linux-gnu/libOpenGL.so OPENGL_glx_LIBRARY: /usr/lib/x86_64-linux-gnu/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): CMakeLists.txt:815 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found OpenGL: /usr/lib/x86_64-linux-gnu/libOpenGL.so -- Checking for module 'glut' -- No package 'glut' found CMake Warning (dev) at /usr/share/cmake-3.23/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (FREEGLUT) does not match the name of the calling package (FreeGlut). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cMake/FindFreeGlut.cmake:14 (FIND_PACKAGE_HANDLE_STANDARD_ARGS) CMakeLists.txt:818 (FIND_PACKAGE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found FREEGLUT: /usr/include/GL -- USE QT5 -- Found QGLVIEWER-qt5: /usr/include/QGLViewer -- Found QT5 -- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Found GMP: /usr/include/x86_64-linux-gnu -- Found CGAL: /usr/include, CGAL_LIBRARIES-NOTFOUND -- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so -- Found CGAL -- Found GL2PS: /usr/lib/x86_64-linux-gnu/libgl2ps.so -- Found GL2PS LBMFLOW is still experimental, building and running LBM engine are at your own risk! -- Found OpenBlas: /usr/lib/x86_64-linux-gnu/libopenblas.so -- BLAS_INCLUDE_DIR=/usr/include/x86_64-linux-gnu -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/lib/x86_64-linux-gnu/libopenblas.so -- Looking for cheev_ -- Looking for cheev_ - found -- Found LAPACK: /usr/lib/x86_64-linux-gnu/libopenblas.so;-lpthread;-lm;-ldl -- Found OpenBlas -- Found Lapack Yade will be installed to /usr -- Suffix is set to -mpfr150 -- LIBRARY_OUTPUT_PATH is set to lib/x86_64-linux-gnu -- runtimePREFIX is set to /usr -- Could NOT find gts (missing: PY_gts) -- Use embedded version of gts. Please, consider installing the corresponding package -- pkg: + common + dem + fem + lbm + levelSet + openfoam + pfv + polyhedra + potential -- preprocessing: + dem + potential -- postprocessing: + image + vtk -- =========================================================== -- Yade configured with following features: LOGGER USEFUL_ERRORS REAL_HP COMPLEX_MP MPFR MPC VTK OPENMP GTS QT5 CGAL FEMLIKE GL2PS LBMFLOW POTENTIAL_PARTICLES -- Disabled features: ASAN PFVFLOW PFVFLOW LINSOLV MPI TWOPHASEFLOW SPH LS_DEM DEFORM LIQMIGRATION MASK_ARBITRARY THERMAL PARTIALSAT PROFILING POTENTIAL_BLOCKS -- Using MAX_LOG_LEVEL=5, ENABLE_LOGGER=ON -- Optimized build -- C++ standard version: 17 -- =========================================================== -- CMAKE_CXX_FLAGS =  -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DYADE_GL2PS -DLBM_ENGINE -- CMAKE_CXX_FLAGS_RELEASE =  -O3 -DNDEBUG -- CMAKE_CXX_FLAGS_DEBUG =  -g -- =========================================================== -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_RUNSTATEDIR -- Build files have been written to: /build/yade-cajvWY/yade-2022.01a/debian/build-mpfr150 mkdir -p /build/yade-cajvWY/yade-2022.01a/debian/matplotlib mkdir -p /build/yade-cajvWY/yade-2022.01a/debian/tmp #Output an information about available memory and CPU cat /proc/meminfo MemTotal: 20007100 kB MemFree: 1208540 kB MemAvailable: 6038384 kB Buffers: 1052 kB Cached: 4800736 kB SwapCached: 29184 kB Active: 1761444 kB Inactive: 15634712 kB Active(anon): 288496 kB Inactive(anon): 12306452 kB Active(file): 1472948 kB Inactive(file): 3328260 kB Unevictable: 0 kB Mlocked: 0 kB SwapTotal: 1048572 kB SwapFree: 46852 kB Dirty: 217084 kB Writeback: 128 kB AnonPages: 12574164 kB Mapped: 153508 kB Shmem: 1504 kB KReclaimable: 389492 kB Slab: 1072172 kB SReclaimable: 389492 kB SUnreclaim: 682680 kB KernelStack: 11152 kB PageTables: 43432 kB NFS_Unstable: 0 kB Bounce: 0 kB WritebackTmp: 0 kB CommitLimit: 11052120 kB Committed_AS: 18487456 kB VmallocTotal: 34359738367 kB VmallocUsed: 19832 kB VmallocChunk: 0 kB Percpu: 8592 kB HardwareCorrupted: 0 kB AnonHugePages: 0 kB ShmemHugePages: 0 kB ShmemPmdMapped: 0 kB FileHugePages: 0 kB FilePmdMapped: 0 kB CmaTotal: 0 kB CmaFree: 0 kB HugePages_Total: 0 HugePages_Free: 0 HugePages_Rsvd: 0 HugePages_Surp: 0 Hugepagesize: 2048 kB Hugetlb: 0 kB DirectMap4k: 4995072 kB DirectMap2M: 15616000 kB DirectMap1G: 0 kB cat /proc/cpuinfo processor : 0 vendor_id : GenuineIntel cpu family : 6 model : 79 model name : Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz stepping : 1 microcode : 0xb000040 cpu MHz : 2599.994 cache size : 35840 KB physical id : 0 siblings : 10 core id : 0 cpu cores : 10 apicid : 0 initial apicid : 0 fpu : yes fpu_exception : yes cpuid level : 13 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush acpi mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl cpuid tsc_known_freq pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap xsaveopt md_clear flush_l1d bugs : cpu_meltdown spectre_v1 spectre_v2 spec_store_bypass l1tf mds swapgs itlb_multihit bogomips : 5199.98 clflush size : 64 cache_alignment : 64 address sizes : 46 bits physical, 48 bits virtual power management: processor : 1 vendor_id : GenuineIntel cpu family : 6 model : 79 model name : Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz stepping : 1 microcode : 0xb000040 cpu MHz : 2599.994 cache size : 35840 KB physical id : 0 siblings : 10 core id : 1 cpu cores : 10 apicid : 2 initial apicid : 2 fpu : yes fpu_exception : yes cpuid level : 13 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush acpi mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl cpuid tsc_known_freq pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap xsaveopt md_clear flush_l1d bugs : cpu_meltdown spectre_v1 spectre_v2 spec_store_bypass l1tf mds swapgs itlb_multihit bogomips : 5199.98 clflush size : 64 cache_alignment : 64 address sizes : 46 bits physical, 48 bits virtual power management: processor : 2 vendor_id : GenuineIntel cpu family : 6 model : 79 model name : Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz stepping : 1 microcode : 0xb000040 cpu MHz : 2599.994 cache size : 35840 KB physical id : 0 siblings : 10 core id : 2 cpu cores : 10 apicid : 4 initial apicid : 4 fpu : yes fpu_exception : yes cpuid level : 13 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush acpi mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl cpuid tsc_known_freq pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap xsaveopt md_clear flush_l1d bugs : cpu_meltdown spectre_v1 spectre_v2 spec_store_bypass l1tf mds swapgs itlb_multihit bogomips : 5199.98 clflush size : 64 cache_alignment : 64 address sizes : 46 bits physical, 48 bits virtual power management: processor : 3 vendor_id : GenuineIntel cpu family : 6 model : 79 model name : Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz stepping : 1 microcode : 0xb000040 cpu MHz : 2599.994 cache size : 35840 KB physical id : 0 siblings : 10 core id : 3 cpu cores : 10 apicid : 6 initial apicid : 6 fpu : yes fpu_exception : yes cpuid level : 13 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush acpi mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl cpuid tsc_known_freq pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap xsaveopt md_clear flush_l1d bugs : cpu_meltdown spectre_v1 spectre_v2 spec_store_bypass l1tf mds swapgs itlb_multihit bogomips : 5199.98 clflush size : 64 cache_alignment : 64 address sizes : 46 bits physical, 48 bits virtual power management: processor : 4 vendor_id : GenuineIntel cpu family : 6 model : 79 model name : Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz stepping : 1 microcode : 0xb000040 cpu MHz : 2599.994 cache size : 35840 KB physical id : 0 siblings : 10 core id : 4 cpu cores : 10 apicid : 8 initial apicid : 8 fpu : yes fpu_exception : yes cpuid level : 13 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush acpi mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl cpuid tsc_known_freq pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap xsaveopt md_clear flush_l1d bugs : cpu_meltdown spectre_v1 spectre_v2 spec_store_bypass l1tf mds swapgs itlb_multihit bogomips : 5199.98 clflush size : 64 cache_alignment : 64 address sizes : 46 bits physical, 48 bits virtual power management: processor : 5 vendor_id : GenuineIntel cpu family : 6 model : 79 model name : Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz stepping : 1 microcode : 0xb000040 cpu MHz : 2599.994 cache size : 35840 KB physical id : 0 siblings : 10 core id : 5 cpu cores : 10 apicid : 10 initial apicid : 10 fpu : yes fpu_exception : yes cpuid level : 13 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush acpi mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl cpuid tsc_known_freq pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap xsaveopt md_clear flush_l1d bugs : cpu_meltdown spectre_v1 spectre_v2 spec_store_bypass l1tf mds swapgs itlb_multihit bogomips : 5199.98 clflush size : 64 cache_alignment : 64 address sizes : 46 bits physical, 48 bits virtual power management: processor : 6 vendor_id : GenuineIntel cpu family : 6 model : 79 model name : Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz stepping : 1 microcode : 0xb000040 cpu MHz : 2599.994 cache size : 35840 KB physical id : 0 siblings : 10 core id : 6 cpu cores : 10 apicid : 12 initial apicid : 12 fpu : yes fpu_exception : yes cpuid level : 13 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush acpi mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl cpuid tsc_known_freq pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap xsaveopt md_clear flush_l1d bugs : cpu_meltdown spectre_v1 spectre_v2 spec_store_bypass l1tf mds swapgs itlb_multihit bogomips : 5199.98 clflush size : 64 cache_alignment : 64 address sizes : 46 bits physical, 48 bits virtual power management: processor : 7 vendor_id : GenuineIntel cpu family : 6 model : 79 model name : Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz stepping : 1 microcode : 0xb000040 cpu MHz : 2599.994 cache size : 35840 KB physical id : 0 siblings : 10 core id : 7 cpu cores : 10 apicid : 14 initial apicid : 14 fpu : yes fpu_exception : yes cpuid level : 13 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush acpi mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl cpuid tsc_known_freq pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap xsaveopt md_clear flush_l1d bugs : cpu_meltdown spectre_v1 spectre_v2 spec_store_bypass l1tf mds swapgs itlb_multihit bogomips : 5199.98 clflush size : 64 cache_alignment : 64 address sizes : 46 bits physical, 48 bits virtual power management: processor : 8 vendor_id : GenuineIntel cpu family : 6 model : 79 model name : Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz stepping : 1 microcode : 0xb000040 cpu MHz : 2599.994 cache size : 35840 KB physical id : 0 siblings : 10 core id : 8 cpu cores : 10 apicid : 16 initial apicid : 16 fpu : yes fpu_exception : yes cpuid level : 13 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush acpi mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl cpuid tsc_known_freq pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap xsaveopt md_clear flush_l1d bugs : cpu_meltdown spectre_v1 spectre_v2 spec_store_bypass l1tf mds swapgs itlb_multihit bogomips : 5199.98 clflush size : 64 cache_alignment : 64 address sizes : 46 bits physical, 48 bits virtual power management: processor : 9 vendor_id : GenuineIntel cpu family : 6 model : 79 model name : Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz stepping : 1 microcode : 0xb000040 cpu MHz : 2599.994 cache size : 35840 KB physical id : 0 siblings : 10 core id : 9 cpu cores : 10 apicid : 18 initial apicid : 18 fpu : yes fpu_exception : yes cpuid level : 13 wp : yes flags : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush acpi mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl cpuid tsc_known_freq pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch cpuid_fault invpcid_single pti ssbd ibrs ibpb stibp fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap xsaveopt md_clear flush_l1d bugs : cpu_meltdown spectre_v1 spectre_v2 spec_store_bypass l1tf mds swapgs itlb_multihit bogomips : 5199.98 clflush size : 64 cache_alignment : 64 address sizes : 46 bits physical, 48 bits virtual power management: make[1]: Leaving directory '/build/yade-cajvWY/yade-2022.01a' debian/rules override_dh_auto_build make[1]: Entering directory '/build/yade-cajvWY/yade-2022.01a' dpkg-query: package 'python3-sphinx' is not installed and no information is available Use dpkg --info (= 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Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 41 | ) | ^ In file included from /usr/include/boost/python/object/iterator.hpp:28, from /usr/include/boost/python/iterator.hpp:12, from /usr/include/boost/python.hpp:37, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/core/Bound.hpp:10, from /build/yade-cajvWY/yade-2022.01a/core/Aabb.hpp:11, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/Bo1_DeformableElement_Aabb.cpp:9: /usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This header is deprecated. 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Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 41 | ) | ^ In file included from /usr/include/boost/python/object/iterator.hpp:28, from /usr/include/boost/python/iterator.hpp:12, from /usr/include/boost/python.hpp:37, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/core/Bound.hpp:10, from /build/yade-cajvWY/yade-2022.01a/core/Aabb.hpp:11, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/Bo1_Node_Aabb.cpp:10: /usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This header is deprecated. 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Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 41 | ) | ^ In file included from /usr/include/boost/python/object/iterator.hpp:28, from /usr/include/boost/python/iterator.hpp:12, from /usr/include/boost/python.hpp:37, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/serialization/Serializable.hpp:14, from /build/yade-cajvWY/yade-2022.01a/core/Material.hpp:4, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/CohesiveMat.hpp:9, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/CohesiveMat.cpp:9: /usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^ [ 1%] Building CXX object CMakeFiles/pkg_fem.dir/pkg/fem/DeformableCohesiveElement.cpp.o /usr/bin/c++ -DBOOST_LOG_DYN_LINK -DFREEGLUT_VERSION_MAJOR=2 -DMAX_LOG_LEVEL=5 -DQT_NO_KEYWORDS -DSUITESPARSE_VERSION_4 -DYADE_BOOST_LOG -DYADE_COMPLEX_MP -DYADE_FEM -DYADE_LS_DEM -DYADE_MPFR -DYADE_ODEINT -DYADE_POTENTIAL_PARTICLES -DYADE_REAL_BIT=64 -DYADE_REAL_DEC=15 -Dpkg_fem_EXPORTS -I/build/yade-cajvWY/yade-2022.01a -I/usr/include/python3.10 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/eigen3 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/GL -I/usr/include/suitesparse -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/python3/dist-packages/mpi4py/include -I/build/yade-cajvWY/yade-2022.01a/debian/build-double -I/build/yade-cajvWY/yade-2022.01a/debian/build-double/pkg/pfv -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DFLOW_ENGINE -DFLOW_ENGINE -DLINSOLV -pthread -DYADE_MPI -DTWOPHASEFLOW -DYADE_GL2PS -DLBM_ENGINE -DTHERMAL -DPARTIALSAT -fPIC -ftrack-macro-expansion=0 -save-temps -DEIGEN_DONT_VECTORIZE -DEIGEN_DONT_ALIGN -DEIGEN_DISABLE_UNALIGNED_ARRAY_ASSERT -DCGAL_DISABLE_ROUNDING_MATH_CHECK -frounding-math -std=gnu++14 -MD -MT CMakeFiles/pkg_fem.dir/pkg/fem/DeformableCohesiveElement.cpp.o -MF CMakeFiles/pkg_fem.dir/pkg/fem/DeformableCohesiveElement.cpp.o.d -o CMakeFiles/pkg_fem.dir/pkg/fem/DeformableCohesiveElement.cpp.o -c /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableCohesiveElement.cpp In file included from /usr/include/boost/python/exception_translator.hpp:10, from /usr/include/boost/python.hpp:28, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableCohesiveElement.cpp:9: /usr/include/boost/bind.hpp:41:273: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 41 | ) | ^ In file included from /usr/include/boost/python/object/iterator.hpp:28, from /usr/include/boost/python/iterator.hpp:12, from /usr/include/boost/python.hpp:37, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableCohesiveElement.cpp:9: /usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^ In file included from /usr/include/eigen3/Eigen/Core:294, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:90, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableCohesiveElement.cpp:9: In member function ‘Eigen::PlainObjectBase& Eigen::PlainObjectBase::operator=(Eigen::PlainObjectBase&&) [with Derived = Eigen::Matrix]’, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&&) [with _Scalar = double; int _Rows = 3; int _Cols = 1; int _Options = 0; int _MaxRows = 3; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:281:22, inlined from ‘yade::Se3& yade::Se3::operator=(yade::Se3&&)’ at /build/yade-cajvWY/yade-2022.01a/lib/high-precision/MathEigenTypes.hpp:135:31, inlined from ‘void yade::DeformableCohesiveElement::addPair(const boost::shared_ptr&, const boost::shared_ptr&)’ at /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableCohesiveElement.cpp:52:31: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:504:7: warning: ‘.yade::Se3::position.Eigen::Matrix::.Eigen::PlainObjectBase >::m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 504 | m_storage = std::move(other.m_storage); | ^~~~~~~~~ /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableCohesiveElement.cpp: In member function ‘void yade::DeformableCohesiveElement::addPair(const boost::shared_ptr&, const boost::shared_ptr&)’: /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableCohesiveElement.cpp:52:38: note: ‘’ declared here 52 | this->nodepairs[pair] = Se3r(); | ^ In file included from /usr/include/eigen3/Eigen/Core:294, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:90, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableCohesiveElement.cpp:9: In member function ‘Eigen::PlainObjectBase& Eigen::PlainObjectBase::operator=(Eigen::PlainObjectBase&&) [with Derived = Eigen::Matrix]’, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&&) [with _Scalar = double; int _Rows = 4; int _Cols = 1; int _Options = 0; int _MaxRows = 4; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:281:22, inlined from ‘Eigen::Quaternion& Eigen::Quaternion::operator=(Eigen::Quaternion&&) [with _Scalar = double; int _Options = 0]’ at /usr/include/eigen3/unsupported/Eigen/../../Eigen/src/Geometry/Quaternion.h:330:14, inlined from ‘yade::Se3& yade::Se3::operator=(yade::Se3&&)’ at /build/yade-cajvWY/yade-2022.01a/lib/high-precision/MathEigenTypes.hpp:135:31, inlined from ‘void yade::DeformableCohesiveElement::addPair(const boost::shared_ptr&, const boost::shared_ptr&)’ at /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableCohesiveElement.cpp:52:31: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:504:7: warning: ‘.yade::Se3::orientation.Eigen::Quaternion::m_coeffs.Eigen::Matrix::.Eigen::PlainObjectBase >::m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 504 | m_storage = std::move(other.m_storage); | ^~~~~~~~~ /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableCohesiveElement.cpp: In member function ‘void yade::DeformableCohesiveElement::addPair(const boost::shared_ptr&, const boost::shared_ptr&)’: /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableCohesiveElement.cpp:52:38: note: ‘’ declared here 52 | this->nodepairs[pair] = Se3r(); | ^ [ 2%] Building CXX object CMakeFiles/pkg_fem.dir/pkg/fem/DeformableElement.cpp.o /usr/bin/c++ -DBOOST_LOG_DYN_LINK -DFREEGLUT_VERSION_MAJOR=2 -DMAX_LOG_LEVEL=5 -DQT_NO_KEYWORDS -DSUITESPARSE_VERSION_4 -DYADE_BOOST_LOG -DYADE_COMPLEX_MP -DYADE_FEM -DYADE_LS_DEM -DYADE_MPFR -DYADE_ODEINT -DYADE_POTENTIAL_PARTICLES -DYADE_REAL_BIT=64 -DYADE_REAL_DEC=15 -Dpkg_fem_EXPORTS -I/build/yade-cajvWY/yade-2022.01a -I/usr/include/python3.10 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/eigen3 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/GL -I/usr/include/suitesparse -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/python3/dist-packages/mpi4py/include -I/build/yade-cajvWY/yade-2022.01a/debian/build-double -I/build/yade-cajvWY/yade-2022.01a/debian/build-double/pkg/pfv -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DFLOW_ENGINE -DFLOW_ENGINE -DLINSOLV -pthread -DYADE_MPI -DTWOPHASEFLOW -DYADE_GL2PS -DLBM_ENGINE -DTHERMAL -DPARTIALSAT -fPIC -ftrack-macro-expansion=0 -save-temps -DEIGEN_DONT_VECTORIZE -DEIGEN_DONT_ALIGN -DEIGEN_DISABLE_UNALIGNED_ARRAY_ASSERT -DCGAL_DISABLE_ROUNDING_MATH_CHECK -frounding-math -std=gnu++14 -MD -MT CMakeFiles/pkg_fem.dir/pkg/fem/DeformableElement.cpp.o -MF CMakeFiles/pkg_fem.dir/pkg/fem/DeformableElement.cpp.o.d -o CMakeFiles/pkg_fem.dir/pkg/fem/DeformableElement.cpp.o -c /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.cpp In file included from /usr/include/boost/python/exception_translator.hpp:10, from /usr/include/boost/python.hpp:28, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/serialization/Serializable.hpp:14, from /build/yade-cajvWY/yade-2022.01a/core/BodyContainer.hpp:9, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.cpp:9: /usr/include/boost/bind.hpp:41:273: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 41 | ) | ^ In file included from /usr/include/boost/python/object/iterator.hpp:28, from /usr/include/boost/python/iterator.hpp:12, from /usr/include/boost/python.hpp:37, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/serialization/Serializable.hpp:14, from /build/yade-cajvWY/yade-2022.01a/core/BodyContainer.hpp:9, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.cpp:9: /usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^ In file included from /usr/include/eigen3/Eigen/Core:294, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:90, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/serialization/Serializable.hpp:14, from /build/yade-cajvWY/yade-2022.01a/core/BodyContainer.hpp:9, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.cpp:9: In member function ‘Eigen::PlainObjectBase& Eigen::PlainObjectBase::operator=(Eigen::PlainObjectBase&&) [with Derived = Eigen::Matrix]’, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&&) [with _Scalar = double; int _Rows = 3; int _Cols = 1; int _Options = 0; int _MaxRows = 3; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:281:22, inlined from ‘yade::Se3& yade::Se3::operator=(yade::Se3&&)’ at /build/yade-cajvWY/yade-2022.01a/lib/high-precision/MathEigenTypes.hpp:135:31, inlined from ‘void yade::DeformableElement::addNode(const boost::shared_ptr&)’ at /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.cpp:70:34: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:504:7: warning: ‘.yade::Se3::position.Eigen::Matrix::.Eigen::PlainObjectBase >::m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 504 | m_storage = std::move(other.m_storage); | ^~~~~~~~~ /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.cpp: In member function ‘void yade::DeformableElement::addNode(const boost::shared_ptr&)’: /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.cpp:70:41: note: ‘’ declared here 70 | this->localmap[nodeBody] = Se3r(); // meaningful values will be put in by DeformableElement::updateProperties | ^ In file included from /usr/include/eigen3/Eigen/Core:294, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:90, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/serialization/Serializable.hpp:14, from /build/yade-cajvWY/yade-2022.01a/core/BodyContainer.hpp:9, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.cpp:9: In member function ‘Eigen::PlainObjectBase& Eigen::PlainObjectBase::operator=(Eigen::PlainObjectBase&&) [with Derived = Eigen::Matrix]’, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&&) [with _Scalar = double; int _Rows = 4; int _Cols = 1; int _Options = 0; int _MaxRows = 4; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:281:22, inlined from ‘Eigen::Quaternion& Eigen::Quaternion::operator=(Eigen::Quaternion&&) [with _Scalar = double; int _Options = 0]’ at /usr/include/eigen3/unsupported/Eigen/../../Eigen/src/Geometry/Quaternion.h:330:14, inlined from ‘yade::Se3& yade::Se3::operator=(yade::Se3&&)’ at /build/yade-cajvWY/yade-2022.01a/lib/high-precision/MathEigenTypes.hpp:135:31, inlined from ‘void yade::DeformableElement::addNode(const boost::shared_ptr&)’ at /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.cpp:70:34: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:504:7: warning: ‘.yade::Se3::orientation.Eigen::Quaternion::m_coeffs.Eigen::Matrix::.Eigen::PlainObjectBase >::m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 504 | m_storage = std::move(other.m_storage); | ^~~~~~~~~ /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.cpp: In member function ‘void yade::DeformableElement::addNode(const boost::shared_ptr&)’: /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.cpp:70:41: note: ‘’ declared here 70 | this->localmap[nodeBody] = Se3r(); // meaningful values will be put in by DeformableElement::updateProperties | ^ [ 2%] Building CXX object CMakeFiles/pkg_fem.dir/pkg/fem/FEInternalForceDispatchers.cpp.o /usr/bin/c++ -DBOOST_LOG_DYN_LINK -DFREEGLUT_VERSION_MAJOR=2 -DMAX_LOG_LEVEL=5 -DQT_NO_KEYWORDS -DSUITESPARSE_VERSION_4 -DYADE_BOOST_LOG -DYADE_COMPLEX_MP -DYADE_FEM -DYADE_LS_DEM -DYADE_MPFR -DYADE_ODEINT -DYADE_POTENTIAL_PARTICLES -DYADE_REAL_BIT=64 -DYADE_REAL_DEC=15 -Dpkg_fem_EXPORTS -I/build/yade-cajvWY/yade-2022.01a -I/usr/include/python3.10 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/eigen3 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/GL -I/usr/include/suitesparse -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/python3/dist-packages/mpi4py/include -I/build/yade-cajvWY/yade-2022.01a/debian/build-double -I/build/yade-cajvWY/yade-2022.01a/debian/build-double/pkg/pfv -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DFLOW_ENGINE -DFLOW_ENGINE -DLINSOLV -pthread -DYADE_MPI -DTWOPHASEFLOW -DYADE_GL2PS -DLBM_ENGINE -DTHERMAL -DPARTIALSAT -fPIC -ftrack-macro-expansion=0 -save-temps -DEIGEN_DONT_VECTORIZE -DEIGEN_DONT_ALIGN -DEIGEN_DISABLE_UNALIGNED_ARRAY_ASSERT -DCGAL_DISABLE_ROUNDING_MATH_CHECK -frounding-math -std=gnu++14 -MD -MT CMakeFiles/pkg_fem.dir/pkg/fem/FEInternalForceDispatchers.cpp.o -MF CMakeFiles/pkg_fem.dir/pkg/fem/FEInternalForceDispatchers.cpp.o.d -o CMakeFiles/pkg_fem.dir/pkg/fem/FEInternalForceDispatchers.cpp.o -c /build/yade-cajvWY/yade-2022.01a/pkg/fem/FEInternalForceDispatchers.cpp In file included from /usr/include/boost/python/exception_translator.hpp:10, from /usr/include/boost/python.hpp:28, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/base/Logging.hpp:33, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.hpp:11, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/FEInternalForceDispatchers.cpp:9: /usr/include/boost/bind.hpp:41:273: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 41 | ) | ^ In file included from /usr/include/boost/python/object/iterator.hpp:28, from /usr/include/boost/python/iterator.hpp:12, from /usr/include/boost/python.hpp:37, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/base/Logging.hpp:33, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.hpp:11, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/FEInternalForceDispatchers.cpp:9: /usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^ [ 2%] Building CXX object CMakeFiles/pkg_fem.dir/pkg/fem/FEInternalForceEngine.cpp.o /usr/bin/c++ -DBOOST_LOG_DYN_LINK -DFREEGLUT_VERSION_MAJOR=2 -DMAX_LOG_LEVEL=5 -DQT_NO_KEYWORDS -DSUITESPARSE_VERSION_4 -DYADE_BOOST_LOG -DYADE_COMPLEX_MP -DYADE_FEM -DYADE_LS_DEM -DYADE_MPFR -DYADE_ODEINT -DYADE_POTENTIAL_PARTICLES -DYADE_REAL_BIT=64 -DYADE_REAL_DEC=15 -Dpkg_fem_EXPORTS -I/build/yade-cajvWY/yade-2022.01a -I/usr/include/python3.10 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/eigen3 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/GL -I/usr/include/suitesparse -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/python3/dist-packages/mpi4py/include -I/build/yade-cajvWY/yade-2022.01a/debian/build-double -I/build/yade-cajvWY/yade-2022.01a/debian/build-double/pkg/pfv -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DFLOW_ENGINE -DFLOW_ENGINE -DLINSOLV -pthread -DYADE_MPI -DTWOPHASEFLOW -DYADE_GL2PS -DLBM_ENGINE -DTHERMAL -DPARTIALSAT -fPIC -ftrack-macro-expansion=0 -save-temps -DEIGEN_DONT_VECTORIZE -DEIGEN_DONT_ALIGN -DEIGEN_DISABLE_UNALIGNED_ARRAY_ASSERT -DCGAL_DISABLE_ROUNDING_MATH_CHECK -frounding-math -std=gnu++14 -MD -MT CMakeFiles/pkg_fem.dir/pkg/fem/FEInternalForceEngine.cpp.o -MF CMakeFiles/pkg_fem.dir/pkg/fem/FEInternalForceEngine.cpp.o.d -o CMakeFiles/pkg_fem.dir/pkg/fem/FEInternalForceEngine.cpp.o -c /build/yade-cajvWY/yade-2022.01a/pkg/fem/FEInternalForceEngine.cpp In file included from /usr/include/boost/python/exception_translator.hpp:10, from /usr/include/boost/python.hpp:28, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/base/Logging.hpp:33, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.hpp:11, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/FEInternalForceEngine.cpp:10: /usr/include/boost/bind.hpp:41:273: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 41 | ) | ^ In file included from /usr/include/boost/python/object/iterator.hpp:28, from /usr/include/boost/python/iterator.hpp:12, from /usr/include/boost/python.hpp:37, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/base/Logging.hpp:33, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.hpp:11, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/FEInternalForceEngine.cpp:10: /usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^ [ 3%] Building CXX object CMakeFiles/pkg_fem.dir/pkg/fem/Gl1_DeformableElement.cpp.o /usr/bin/c++ -DBOOST_LOG_DYN_LINK -DFREEGLUT_VERSION_MAJOR=2 -DMAX_LOG_LEVEL=5 -DQT_NO_KEYWORDS -DSUITESPARSE_VERSION_4 -DYADE_BOOST_LOG -DYADE_COMPLEX_MP -DYADE_FEM -DYADE_LS_DEM -DYADE_MPFR -DYADE_ODEINT -DYADE_POTENTIAL_PARTICLES -DYADE_REAL_BIT=64 -DYADE_REAL_DEC=15 -Dpkg_fem_EXPORTS -I/build/yade-cajvWY/yade-2022.01a -I/usr/include/python3.10 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/eigen3 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/GL -I/usr/include/suitesparse -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/python3/dist-packages/mpi4py/include -I/build/yade-cajvWY/yade-2022.01a/debian/build-double -I/build/yade-cajvWY/yade-2022.01a/debian/build-double/pkg/pfv -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DFLOW_ENGINE -DFLOW_ENGINE -DLINSOLV -pthread -DYADE_MPI -DTWOPHASEFLOW -DYADE_GL2PS -DLBM_ENGINE -DTHERMAL -DPARTIALSAT -fPIC -ftrack-macro-expansion=0 -save-temps -DEIGEN_DONT_VECTORIZE -DEIGEN_DONT_ALIGN -DEIGEN_DISABLE_UNALIGNED_ARRAY_ASSERT -DCGAL_DISABLE_ROUNDING_MATH_CHECK -frounding-math -std=gnu++14 -MD -MT CMakeFiles/pkg_fem.dir/pkg/fem/Gl1_DeformableElement.cpp.o -MF CMakeFiles/pkg_fem.dir/pkg/fem/Gl1_DeformableElement.cpp.o.d -o CMakeFiles/pkg_fem.dir/pkg/fem/Gl1_DeformableElement.cpp.o -c /build/yade-cajvWY/yade-2022.01a/pkg/fem/Gl1_DeformableElement.cpp In file included from /usr/include/boost/python/exception_translator.hpp:10, from /usr/include/boost/python.hpp:28, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/opengl/OpenGLWrapper.hpp:20, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/Gl1_DeformableElement.cpp:11: /usr/include/boost/bind.hpp:41:273: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 41 | ) | ^ In file included from /usr/include/boost/python/object/iterator.hpp:28, from /usr/include/boost/python/iterator.hpp:12, from /usr/include/boost/python.hpp:37, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/opengl/OpenGLWrapper.hpp:20, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/Gl1_DeformableElement.cpp:11: /usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^ [ 3%] Building CXX object CMakeFiles/pkg_fem.dir/pkg/fem/Gl1_Node.cpp.o /usr/bin/c++ -DBOOST_LOG_DYN_LINK -DFREEGLUT_VERSION_MAJOR=2 -DMAX_LOG_LEVEL=5 -DQT_NO_KEYWORDS -DSUITESPARSE_VERSION_4 -DYADE_BOOST_LOG -DYADE_COMPLEX_MP -DYADE_FEM -DYADE_LS_DEM -DYADE_MPFR -DYADE_ODEINT -DYADE_POTENTIAL_PARTICLES -DYADE_REAL_BIT=64 -DYADE_REAL_DEC=15 -Dpkg_fem_EXPORTS -I/build/yade-cajvWY/yade-2022.01a -I/usr/include/python3.10 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/eigen3 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/GL -I/usr/include/suitesparse -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/python3/dist-packages/mpi4py/include -I/build/yade-cajvWY/yade-2022.01a/debian/build-double -I/build/yade-cajvWY/yade-2022.01a/debian/build-double/pkg/pfv -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DFLOW_ENGINE -DFLOW_ENGINE -DLINSOLV -pthread -DYADE_MPI -DTWOPHASEFLOW -DYADE_GL2PS -DLBM_ENGINE -DTHERMAL -DPARTIALSAT -fPIC -ftrack-macro-expansion=0 -save-temps -DEIGEN_DONT_VECTORIZE -DEIGEN_DONT_ALIGN -DEIGEN_DISABLE_UNALIGNED_ARRAY_ASSERT -DCGAL_DISABLE_ROUNDING_MATH_CHECK -frounding-math -std=gnu++14 -MD -MT CMakeFiles/pkg_fem.dir/pkg/fem/Gl1_Node.cpp.o -MF CMakeFiles/pkg_fem.dir/pkg/fem/Gl1_Node.cpp.o.d -o CMakeFiles/pkg_fem.dir/pkg/fem/Gl1_Node.cpp.o -c /build/yade-cajvWY/yade-2022.01a/pkg/fem/Gl1_Node.cpp In file included from /usr/include/boost/python/exception_translator.hpp:10, from /usr/include/boost/python.hpp:28, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/opengl/OpenGLWrapper.hpp:20, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/Gl1_Node.cpp:13: /usr/include/boost/bind.hpp:41:273: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 41 | ) | ^ In file included from /usr/include/boost/python/object/iterator.hpp:28, from /usr/include/boost/python/iterator.hpp:12, from /usr/include/boost/python.hpp:37, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/opengl/OpenGLWrapper.hpp:20, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/Gl1_Node.cpp:13: /usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^ [ 4%] Building CXX object CMakeFiles/pkg_fem.dir/pkg/fem/If2_2xLin4NodeTetra_LinCohesiveStiffPropDampElastMat.cpp.o /usr/bin/c++ -DBOOST_LOG_DYN_LINK -DFREEGLUT_VERSION_MAJOR=2 -DMAX_LOG_LEVEL=5 -DQT_NO_KEYWORDS -DSUITESPARSE_VERSION_4 -DYADE_BOOST_LOG -DYADE_COMPLEX_MP -DYADE_FEM -DYADE_LS_DEM -DYADE_MPFR -DYADE_ODEINT -DYADE_POTENTIAL_PARTICLES -DYADE_REAL_BIT=64 -DYADE_REAL_DEC=15 -Dpkg_fem_EXPORTS -I/build/yade-cajvWY/yade-2022.01a -I/usr/include/python3.10 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/eigen3 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/GL -I/usr/include/suitesparse -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/python3/dist-packages/mpi4py/include -I/build/yade-cajvWY/yade-2022.01a/debian/build-double -I/build/yade-cajvWY/yade-2022.01a/debian/build-double/pkg/pfv -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DFLOW_ENGINE -DFLOW_ENGINE -DLINSOLV -pthread -DYADE_MPI -DTWOPHASEFLOW -DYADE_GL2PS -DLBM_ENGINE -DTHERMAL -DPARTIALSAT -fPIC -ftrack-macro-expansion=0 -save-temps -DEIGEN_DONT_VECTORIZE -DEIGEN_DONT_ALIGN -DEIGEN_DISABLE_UNALIGNED_ARRAY_ASSERT -DCGAL_DISABLE_ROUNDING_MATH_CHECK -frounding-math -std=gnu++14 -MD -MT CMakeFiles/pkg_fem.dir/pkg/fem/If2_2xLin4NodeTetra_LinCohesiveStiffPropDampElastMat.cpp.o -MF CMakeFiles/pkg_fem.dir/pkg/fem/If2_2xLin4NodeTetra_LinCohesiveStiffPropDampElastMat.cpp.o.d -o CMakeFiles/pkg_fem.dir/pkg/fem/If2_2xLin4NodeTetra_LinCohesiveStiffPropDampElastMat.cpp.o -c /build/yade-cajvWY/yade-2022.01a/pkg/fem/If2_2xLin4NodeTetra_LinCohesiveStiffPropDampElastMat.cpp In file included from /usr/include/boost/python/exception_translator.hpp:10, from /usr/include/boost/python.hpp:28, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/If2_2xLin4NodeTetra_LinCohesiveStiffPropDampElastMat.hpp:10, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/If2_2xLin4NodeTetra_LinCohesiveStiffPropDampElastMat.cpp:10: /usr/include/boost/bind.hpp:41:273: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 41 | ) | ^ In file included from /usr/include/boost/python/object/iterator.hpp:28, from /usr/include/boost/python/iterator.hpp:12, from /usr/include/boost/python.hpp:37, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/If2_2xLin4NodeTetra_LinCohesiveStiffPropDampElastMat.hpp:10, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/If2_2xLin4NodeTetra_LinCohesiveStiffPropDampElastMat.cpp:10: /usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^ [ 4%] Building CXX object CMakeFiles/pkg_fem.dir/pkg/fem/If2_Lin4NodeTetra_LinIsoRayleighDampElast.cpp.o /usr/bin/c++ -DBOOST_LOG_DYN_LINK -DFREEGLUT_VERSION_MAJOR=2 -DMAX_LOG_LEVEL=5 -DQT_NO_KEYWORDS -DSUITESPARSE_VERSION_4 -DYADE_BOOST_LOG -DYADE_COMPLEX_MP -DYADE_FEM -DYADE_LS_DEM -DYADE_MPFR -DYADE_ODEINT -DYADE_POTENTIAL_PARTICLES -DYADE_REAL_BIT=64 -DYADE_REAL_DEC=15 -Dpkg_fem_EXPORTS -I/build/yade-cajvWY/yade-2022.01a -I/usr/include/python3.10 -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/eigen3 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtXml -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/GL -I/usr/include/suitesparse -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/python3/dist-packages/mpi4py/include -I/build/yade-cajvWY/yade-2022.01a/debian/build-double -I/build/yade-cajvWY/yade-2022.01a/debian/build-double/pkg/pfv -g -O2 -ffile-prefix-map=/build/yade-cajvWY/yade-2022.01a=. -fstack-protector-strong -Wformat -Werror=format-security -g0 -Wdate-time -D_FORTIFY_SOURCE=2 -Werror -Wformat -Wformat-security -Wformat-nonliteral -Wall -Wextra -Wnarrowing -Wreturn-type -Wuninitialized -Wfloat-conversion -Wcast-align -Wdisabled-optimization -Wtrampolines -Wpointer-arith -Wswitch-bool -Wwrite-strings -Wnon-virtual-dtor -Wreturn-local-addr -Wsuggest-override -Wshadow -Wswitch-default -Wno-error=maybe-uninitialized -Wno-comment -Wno-error=cpp -fdce -fstack-protector-strong -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT5 -DYADE_CGAL -DFLOW_ENGINE -DFLOW_ENGINE -DLINSOLV -pthread -DYADE_MPI -DTWOPHASEFLOW -DYADE_GL2PS -DLBM_ENGINE -DTHERMAL -DPARTIALSAT -fPIC -ftrack-macro-expansion=0 -save-temps -DEIGEN_DONT_VECTORIZE -DEIGEN_DONT_ALIGN -DEIGEN_DISABLE_UNALIGNED_ARRAY_ASSERT -DCGAL_DISABLE_ROUNDING_MATH_CHECK -frounding-math -std=gnu++14 -MD -MT CMakeFiles/pkg_fem.dir/pkg/fem/If2_Lin4NodeTetra_LinIsoRayleighDampElast.cpp.o -MF CMakeFiles/pkg_fem.dir/pkg/fem/If2_Lin4NodeTetra_LinIsoRayleighDampElast.cpp.o.d -o CMakeFiles/pkg_fem.dir/pkg/fem/If2_Lin4NodeTetra_LinIsoRayleighDampElast.cpp.o -c /build/yade-cajvWY/yade-2022.01a/pkg/fem/If2_Lin4NodeTetra_LinIsoRayleighDampElast.cpp In file included from /usr/include/boost/python/exception_translator.hpp:10, from /usr/include/boost/python.hpp:28, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/base/Logging.hpp:33, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.hpp:11, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/If2_Lin4NodeTetra_LinIsoRayleighDampElast.cpp:10: /usr/include/boost/bind.hpp:41:273: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 41 | ) | ^ In file included from /usr/include/boost/python/object/iterator.hpp:28, from /usr/include/boost/python/iterator.hpp:12, from /usr/include/boost/python.hpp:37, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/RealHPConfig.hpp:35, from /build/yade-cajvWY/yade-2022.01a/lib/high-precision/Real.hpp:238, from /build/yade-cajvWY/yade-2022.01a/lib/base/Math.hpp:12, from /build/yade-cajvWY/yade-2022.01a/lib/base/Logging.hpp:33, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/DeformableElement.hpp:11, from /build/yade-cajvWY/yade-2022.01a/pkg/fem/If2_Lin4NodeTetra_LinIsoRayleighDampElast.cpp:10: /usr/include/boost/detail/iterator.hpp:13:75: note: ‘#pragma message: This header is deprecated. Use instead.’ 13 | BOOST_HEADER_DEPRECATED("") | ^ c++: fatal error: Killed signal terminated program cc1plus compilation terminated. make[4]: *** [CMakeFiles/pkg_fem.dir/build.make:219: CMakeFiles/pkg_fem.dir/pkg/fem/If2_Lin4NodeTetra_LinIsoRayleighDampElast.cpp.o] Error 1 make[4]: Leaving directory '/build/yade-cajvWY/yade-2022.01a/debian/build-double' make[3]: *** [CMakeFiles/Makefile2:295: CMakeFiles/pkg_fem.dir/all] Error 2 make[3]: Leaving directory '/build/yade-cajvWY/yade-2022.01a/debian/build-double' make[2]: *** [Makefile:139: all] Error 2 make[2]: Leaving directory '/build/yade-cajvWY/yade-2022.01a/debian/build-double' dh_auto_build: error: cd debian/build-double && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2 make[1]: *** [debian/rules:72: override_dh_auto_build] Error 25 make[1]: Leaving directory '/build/yade-cajvWY/yade-2022.01a' make: *** [debian/rules:24: build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 E: run_chroot failed: E: command failed: chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/yade-cajvWY/yade-2022.01a && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1650711955" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" W: listening on child socket failed: I: removing tempdir /tmp/mmdebstrap.UxJlPANPpL... E: mmdebstrap failed to run mmdebstrap failed