Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/v/vcfanno/vcfanno_0.3.2+ds-2_all.buildinfo
Use metasnap for getting required timestamps
New buildinfo file: /tmp/vcfanno-0.3.2+ds-2qk68nwwf/vcfanno_0.3.2+ds-2_all.buildinfo
Get source package info: vcfanno=0.3.2+ds-2
Source URL: http://snapshot.notset.fr/mr/package/vcfanno/0.3.2+ds-2/srcfiles?fileinfo=1
env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11.1 automake=1:1.16.2-4 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.48 bash=5.1~rc1-2 binutils=2.35.1-2 binutils-common=2.35.1-2 binutils-x86-64-linux-gnu=2.35.1-2 bsdextrautils=2.36-3+b1 bsdutils=1:2.36-3+b1 build-essential=12.8 bzip2=1.0.8-4 coreutils=8.32-4+b1 cpp=4:10.2.0-1 cpp-10=10.2.0-15 dash=0.5.10.2-7 debconf=1.5.74 debhelper=13.2.1 debianutils=4.11.2 dh-autoreconf=19 dh-golang=1.49 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13-5 file=1:5.38-5 findutils=4.7.0-1 g++=4:10.2.0-1 g++-10=10.2.0-15 gcc=4:10.2.0-1 gcc-10=10.2.0-15 gcc-10-base=10.2.0-15 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 golang-1.15-go=1.15.2-1 golang-1.15-src=1.15.2-1 golang-any=2:1.15~1 golang-github-biogo-hts-dev=1.1.0+dfsg1-2 golang-github-brentp-bix-dev=0.0~git20190718.00aa7a7+ds-2 golang-github-brentp-goluaez-dev=0.0~git20160116.dd35d08-2 golang-github-brentp-irelate-dev=0.0.1+ds-1 golang-github-brentp-vcfgo-dev=0.0~git20190824.654ed2e-2 golang-github-burntsushi-toml-dev=0.3.1-1 golang-github-cespare-xxhash-dev=2.1.1-1 golang-github-google-go-cmp-dev=0.5.2-1 golang-github-klauspost-compress-dev=1.10.11-1 golang-github-klauspost-cpuid-dev=1.3.1+ds-1 golang-github-klauspost-pgzip-dev=1.2.1-1 golang-github-kr-pretty-dev=0.2.1-1 golang-github-kr-pty-dev=1.1.6-1 golang-github-kr-text-dev=0.1.0-2 golang-github-pkg-errors-dev=0.9.1-1 golang-github-shenwei356-xopen-dev=0.0~git20181203.f4f16dd-1 golang-github-ulikunitz-xz-dev=0.5.6-1 golang-github-yuin-gluare-dev=0.0~git20170607.d7c94f1-2 golang-github-yuin-gopher-lua-dev=0.0~git20170915.0.eb1c729-4 golang-go=2:1.15~1 golang-golang-x-net-dev=1:0.0+git20200226.491c5fc+dfsg-1 golang-golang-x-sys-dev=0.0~git20200523.0598657-1 golang-golang-x-text-dev=0.3.3-1 golang-golang-x-xerrors-dev=0.0~git20191204.9bdfabe-1 golang-gopkg-check.v1-dev=0.0+git20180628.788fd78-1 golang-src=2:1.15~1 golang-toml-dev=0.3.1-1 grep=3.4-1 groff-base=1.22.4-5 gzip=1.10-2 hostname=3.23 init-system-helpers=1.58 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libasan6=10.2.0-15 libatomic1=10.2.0-15 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3.1 libaudit1=1:2.8.5-3.1 libbinutils=2.35.1-2 libblkid1=2.36-3+b1 libbrotli1=1.0.9-2+b1 libbz2-1.0=1.0.8-4 libc-bin=2.31-4 libc-dev-bin=2.31-4 libc6=2.31-4 libc6-dev=2.31-4 libcap-ng0=0.7.9-2.2 libcc1-0=10.2.0-15 libcom-err2=1.45.6-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.1-2 libctf0=2.35.1-2 libcurl3-gnutls=7.72.0-1 libdb5.3=5.3.28+dfsg1-0.6 libdebconfclient0=0.254 libdebhelper-perl=13.2.1 libdeflate0=1.6-1 libdpkg-perl=1.20.5 libelf1=0.181-1 libffi7=3.3-4 libfile-stripnondeterminism-perl=1.9.0-1 libgcc-10-dev=10.2.0-15 libgcc-s1=10.2.0-15 libgcrypt20=1.8.6-2 libgdbm-compat4=1.18.1-5.1 libgdbm6=1.18.1-5.1 libglib2.0-0=2.66.1-2 libgmp10=2:6.2.0+dfsg-6 libgnutls30=3.6.15-4 libgomp1=10.2.0-15 libgpg-error0=1.38-2 libgssapi-krb5-2=1.17-10 libhogweed6=3.6-2 libhts3=1.11-2 libicu67=67.1-4 libidn2-0=2.3.0-1 libisl22=0.22.1-1 libitm1=10.2.0-15 libk5crypto3=1.17-10 libkeyutils1=1.6.1-2 libkrb5-3=1.17-10 libkrb5support0=1.17-10 libldap-2.4-2=2.4.54+dfsg-1 liblsan0=10.2.0-15 liblz4-1=1.9.2-2 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.38-5 libmagic1=1:5.38-5 libmount1=2.36-3+b1 libmpc3=1.2.0-1 libmpfr6=4.1.0-3 libncurses6=6.2+20200918-1 libnettle8=3.6-2 libnghttp2-14=1.41.0-3 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libnss-nis=3.1-4 libnss-nisplus=1.3-4 libp11-kit0=0.23.21-2 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpcre2-8-0=10.34-7 libpcre3=2:8.39-13 libperl5.30=5.30.3-4 libpipeline1=1.5.3-1 libpsl5=0.21.0-1.1 libquadmath0=10.2.0-15 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.27+dfsg-2 libsasl2-modules-db=2.1.27+dfsg-2 libseccomp2=2.4.4-1+b1 libselinux1=3.1-2+b1 libsigsegv2=2.12-2 libsmartcols1=2.36-3+b1 libssh2-1=1.8.0-2.1 libssl1.1=1.1.1h-1 libstdc++-10-dev=10.2.0-15 libstdc++6=10.2.0-15 libsub-override-perl=0.09-2 libsystemd0=246.6-2 libtasn1-6=4.16.0-2 libtinfo6=6.2+20200918-1 libtirpc-common=1.2.6-3 libtirpc-dev=1.2.6-3 libtirpc3=1.2.6-3 libtool=2.4.6-14 libtsan0=10.2.0-15 libubsan1=10.2.0-15 libuchardet0=0.0.7-1 libudev1=246.6-2 libunistring2=0.9.10-4 libuuid1=2.36-3+b1 libxml2=2.9.10+dfsg-6.1 libzstd1=1.4.5+dfsg-4 linux-libc-dev=5.9.1-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 ncurses-base=6.2+20200918-1 ncurses-bin=6.2+20200918-1 patch=2.7.6-6 perl=5.30.3-4 perl-base=5.30.3-4 perl-modules-5.30=5.30.3-4 po-debconf=1.0.21 samtools=1.11-1 sed=4.7-1 sensible-utils=0.0.12+nmu1 sysvinit-utils=2.96-5 tabix=1.11-2 tar=1.30+dfsg-7 util-linux=2.36-3+b1 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main
deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main
deb http://snapshot.notset.fr/archive/debian/20201028T033542Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d vcfanno=0.3.2+ds-2 && mkdir -p /build/vcfanno-UujVNV && dpkg-source --no-check -x /*.dsc /build/vcfanno-UujVNV/vcfanno-0.3.2+ds && chown -R builduser:builduser /build/vcfanno-UujVNV" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/vcfanno-UujVNV/vcfanno-0.3.2+ds && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1603093517" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/vcfanno-UujVNV /tmp/vcfanno-0.3.2+ds-2qk68nwwf bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20201028T033542Z unstable main
I: automatically chosen mode: root
I: chroot architecture amd64 is equal to the host's architecture
I: automatically chosen format: tar
I: using /tmp/mmdebstrap.aFz0bBhlwn as tempdir
I: running apt-get update...
I: downloading packages with apt...
I: extracting archives...
I: installing essential packages...
I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.aFz0bBhlwn
Reading package lists...
Building dependency tree...
util-linux is already the newest version (2.36-3+b1).
The following NEW packages will be installed:
  fakeroot libfakeroot
0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded.
Need to get 134 kB of archives.
After this operation, 397 kB of additional disk space will be used.
Get:1 http://snapshot.notset.fr/archive/debian/20201028T033542Z unstable/main amd64 libfakeroot amd64 1.25.3-1 [47.0 kB]
Get:2 http://snapshot.notset.fr/archive/debian/20201028T033542Z unstable/main amd64 fakeroot amd64 1.25.3-1 [87.0 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 134 kB in 0s (1028 kB/s)
Selecting previously unselected package libfakeroot:amd64.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 4664 files and directories currently installed.)
Preparing to unpack .../libfakeroot_1.25.3-1_amd64.deb ...
Unpacking libfakeroot:amd64 (1.25.3-1) ...
Selecting previously unselected package fakeroot.
Preparing to unpack .../fakeroot_1.25.3-1_amd64.deb ...
Unpacking fakeroot (1.25.3-1) ...
Setting up libfakeroot:amd64 (1.25.3-1) ...
Setting up fakeroot (1.25.3-1) ...
update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
Processing triggers for libc-bin (2.31-4) ...
I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/
I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main
deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main
deb http://snapshot.notset.fr/archive/debian/20201028T033542Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.aFz0bBhlwn
Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB]
Hit:2 http://snapshot.notset.fr/archive/debian/20201028T033542Z unstable InRelease
Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources
Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages
Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources
Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages
Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources
Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages
Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB]
Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB]
Fetched 22.6 MB in 22s (1021 kB/s)
Reading package lists...
I: installing remaining packages inside the chroot...
I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.aFz0bBhlwn
I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d vcfanno=0.3.2+ds-2 && mkdir -p /build/vcfanno-UujVNV && dpkg-source --no-check -x /*.dsc /build/vcfanno-UujVNV/vcfanno-0.3.2+ds && chown -R builduser:builduser /build/vcfanno-UujVNV"' exec /tmp/mmdebstrap.aFz0bBhlwn
Reading package lists...
NOTICE: 'vcfanno' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/vcfanno.git
Please use:
git clone https://salsa.debian.org/med-team/vcfanno.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 2772 kB of source archives.
Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main vcfanno 0.3.2+ds-2 (dsc) [2434 B]
Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main vcfanno 0.3.2+ds-2 (tar) [501 kB]
Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main vcfanno 0.3.2+ds-2 (diff) [2269 kB]
Fetched 2772 kB in 2s (1219 kB/s)
Download complete and in download only mode
W: Download is performed unsandboxed as root as file 'vcfanno_0.3.2+ds-2.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied)
dpkg-source: info: extracting vcfanno in /build/vcfanno-UujVNV/vcfanno-0.3.2+ds
dpkg-source: info: unpacking vcfanno_0.3.2+ds.orig.tar.xz
dpkg-source: info: unpacking vcfanno_0.3.2+ds-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying use-archive-xopen.patch
I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/vcfanno-UujVNV/vcfanno-0.3.2+ds && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1603093517" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.aFz0bBhlwn
dpkg-buildpackage: info: source package vcfanno
dpkg-buildpackage: info: source version 0.3.2+ds-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
 dpkg-source --before-build .
 debian/rules clean
dh clean --buildsystem=golang --with=golang
   dh_auto_clean -O--buildsystem=golang
   dh_autoreconf_clean -O--buildsystem=golang
   dh_clean -O--buildsystem=golang
 debian/rules binary-indep
dh binary-indep --buildsystem=golang --with=golang
   dh_update_autotools_config -i -O--buildsystem=golang
   dh_autoreconf -i -O--buildsystem=golang
   dh_auto_configure -i -O--buildsystem=golang
   dh_auto_build -i -O--buildsystem=golang
	cd obj-x86_64-linux-gnu && go install -trimpath -v -p 4 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared
internal/unsafeheader
internal/cpu
runtime/internal/sys
runtime/internal/atomic
math/bits
runtime/internal/math
unicode/utf8
internal/race
internal/bytealg
sync/atomic
math
unicode
internal/testlog
encoding
container/list
runtime
crypto/internal/subtle
crypto/subtle
unicode/utf16
vendor/golang.org/x/crypto/cryptobyte/asn1
internal/nettrace
vendor/golang.org/x/crypto/internal/subtle
runtime/cgo
internal/reflectlite
sync
internal/singleflight
math/rand
errors
sort
internal/oserror
io
strconv
syscall
container/heap
vendor/golang.org/x/net/dns/dnsmessage
strings
reflect
bytes
hash
hash/crc32
internal/syscall/unix
time
internal/syscall/execenv
bufio
github.com/brentp/irelate/interfaces
regexp/syntax
path
crypto
crypto/internal/randutil
internal/poll
context
crypto/hmac
regexp
os
crypto/rc4
vendor/golang.org/x/crypto/hkdf
internal/fmtsort
encoding/binary
vendor/golang.org/x/text/transform
crypto/sha512
crypto/cipher
crypto/ed25519/internal/edwards25519
fmt
path/filepath
crypto/aes
crypto/des
crypto/md5
io/ioutil
flag
github.com/BurntSushi/toml
compress/flate
encoding/hex
net/url
encoding/csv
log
github.com/pkg/errors
compress/gzip
github.com/brentp/vcfgo
github.com/biogo/hts/bgzf
github.com/yuin/gopher-lua/ast
github.com/yuin/gopher-lua/pm
github.com/biogo/hts/bgzf/index
github.com/yuin/gopher-lua/parse
github.com/biogo/hts/csi
github.com/biogo/hts/internal
os/exec
github.com/klauspost/compress/flate
github.com/biogo/hts/tabix
github.com/biogo/hts/sam
math/big
github.com/yuin/gopher-lua
github.com/biogo/hts/bam
github.com/klauspost/pgzip
github.com/brentp/irelate/parsers
crypto/sha1
crypto/rand
github.com/brentp/bix
crypto/elliptic
encoding/asn1
github.com/brentp/irelate
crypto/ed25519
crypto/rsa
vendor/golang.org/x/crypto/cryptobyte
crypto/sha256
crypto/dsa
crypto/ecdsa
crypto/x509/pkix
encoding/base64
net
encoding/pem
vendor/golang.org/x/crypto/chacha20
github.com/yuin/gluare
vendor/golang.org/x/crypto/poly1305
vendor/golang.org/x/sys/cpu
github.com/brentp/goluaez
vendor/golang.org/x/crypto/curve25519
vendor/golang.org/x/crypto/chacha20poly1305
vendor/golang.org/x/text/unicode/bidi
github.com/brentp/vcfanno/api
vendor/golang.org/x/text/unicode/norm
vendor/golang.org/x/text/secure/bidirule
vendor/golang.org/x/net/http2/hpack
mime
mime/quotedprintable
net/http/internal
os/user
vendor/golang.org/x/net/idna
vendor/golang.org/x/net/http/httpproxy
net/textproto
crypto/x509
vendor/golang.org/x/net/http/httpguts
mime/multipart
crypto/tls
net/http/httptrace
net/http
github.com/shenwei356/xopen
github.com/brentp/vcfanno/shared
github.com/brentp/vcfanno
   dh_auto_test -i -O--buildsystem=golang
	cd obj-x86_64-linux-gnu && go test -vet=off -v -p 4 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared
testing: warning: no tests to run
PASS
ok  	github.com/brentp/vcfanno	0.015s [no tests to run]
=== RUN   Test
OK: 13 passed
--- PASS: Test (0.03s)
=== RUN   TestHandleA
--- PASS: TestHandleA (0.00s)
=== RUN   TestHandlAMulti
--- PASS: TestHandlAMulti (0.00s)
=== RUN   TestByAlt
--- PASS: TestByAlt (0.00s)
PASS
ok  	github.com/brentp/vcfanno/api	0.185s
?   	github.com/brentp/vcfanno/shared	[no test files]
   create-stamp debian/debhelper-build-stamp
   dh_testroot -i -O--buildsystem=golang
   dh_prep -i -O--buildsystem=golang
   debian/rules override_dh_auto_install
make[1]: Entering directory '/build/vcfanno-UujVNV/vcfanno-0.3.2+ds'
dh_auto_install -- --no-source
	cd obj-x86_64-linux-gnu && mkdir -p /build/vcfanno-UujVNV/vcfanno-0.3.2\+ds/debian/tmp/usr
	cd obj-x86_64-linux-gnu && cp -r bin /build/vcfanno-UujVNV/vcfanno-0.3.2\+ds/debian/tmp/usr
make[1]: Leaving directory '/build/vcfanno-UujVNV/vcfanno-0.3.2+ds'
   dh_install -i -O--buildsystem=golang
   debian/rules override_dh_installdocs
make[1]: Entering directory '/build/vcfanno-UujVNV/vcfanno-0.3.2+ds'
# Regenerate bam and bam index file
cat debian/missing-sources/ex.sam| samtools view -Sb - > example/ex.bam
samtools index example/ex.bam example/ex.bam.bai
# Remove corrupt gz file
rm -rf tests/notbgz/notbgz.vcf.gz
# Regenerate all .tbi files
tabix example/exac.vcf.gz
tabix example/fitcons.bed.gz
tabix tests/astar/astar.anno.vcf.gz
tabix tests/by_alt_float/annotation.tsv.gz
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "2	41647	A	G	0.591814	8.493"
tabix tests/citest/at/testexon.bed.gz
tabix tests/citest/dummyexons.bed.gz
tabix tests/data/multiple-alts.vcf.gz
tabix tests/data/number.vcf.gz
tabix tests/dbnsfp/dbNSFP_example.txt.gz
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072302	17072302	G	A	A	V	.	22	16591412	22	15452302	CCT8L2	-	GCC	2	0	g	G/G	G/G	ENSG00000198445	ENST00000359963	ENSP00000353048	380	0.01	0.56404	D	Q96SF2	TCPQM_HUMAN	380	0.789	0.42612	P	0.542	0.47084	P	0.904520	0.08589	U	0.938783	0.885143	0.27956	N	simple_aae	A380V	TCPQL_HUMAN	A380V	2.93	0.84781	M	2.34	0.16357	T	-3.1	0.63513	D	NM_014406.4	A380V	0.141	0.16484	-1.0168	0.24741	T	0.0721	0.29265	T	10	5.216332	0.70443	25.6	0.99874441920417656	0.95120	0.57787	0.30213	DAEFGBI	0.140898394235071	3.051114	0.48442	0.0299346018802206	0.41293	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	4.018000	0.56642	0.572000	0.28477	0.997000	0.39909	0.411000	0.25598	0.0:0.0:1.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072302	17072302	G	C	A	G	.	22	16591412	22	15452302	CCT8L2	-	GCC	2	0	g	G/G	G/G	ENSG00000198445	ENST00000359963	ENSP00000353048	380	0.033	0.44307	D	Q96SF2	TCPQM_HUMAN	380	0.09	0.23627	B	0.07	0.26378	B	0.904520	0.08589	U	0.938783	0.903476	0.27629	N	simple_aae	A380G	TCPQL_HUMAN	A380G	2.93	0.84781	M	2.51	0.14293	T	-2.32	0.51437	N	NM_014406.4	A380G	0.103	0.10746	-0.8882	0.49115	T	0.0370	0.15942	T	10	3.370940	0.46354	22.9	0.99354601284678379	0.60415	0.63209	0.31754	DAEFGBI	-0.422298261850935	1.3349	0.24762	-0.399121413419092	0.24558	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	4.018000	0.56642	0.572000	0.28477	0.997000	0.39909	0.411000	0.25598	0.0:0.0:1.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072302	17072302	G	T	A	D	.	22	16591412	22	15452302	CCT8L2	-	GCC	2	0	g	G/G	G/G	ENSG00000198445	ENST00000359963	ENSP00000353048	380	0.004	0.65363	D	Q96SF2	TCPQM_HUMAN	380	0.992	0.62897	D	0.889	0.61317	P	0.904520	0.08589	U	0.938783	0.641363	0.30591	N	simple_aae	A380D	TCPQL_HUMAN	A380D	2.93	0.84781	M	2.38	0.15849	T	-3.02	0.62590	D	NM_014406.4	A380D	0.399	0.45798	-0.9564	0.39865	T	0.0994	0.37051	T	10	5.077183	0.68398	25.3	0.99680235566444375	0.79002	0.61538	0.31252	DAEFGBI	0.302961726972868	3.794568	0.56349	0.143990621275748	0.47151	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	4.018000	0.56642	0.572000	0.28477	0.997000	0.39909	0.411000	0.25598	0.0:0.0:1.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072303	17072303	C	A	A	S	.	22	16591413	22	15452303	CCT8L2	-	GCC	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	380	1.0	0.00963	T	Q96SF2	TCPQM_HUMAN	380	0.09	0.23627	B	0.07	0.26378	B	0.904520	0.08589	N	0.938783	0.988396	0.24389	N	simple_aae	A380S	TCPQL_HUMAN	A380S	0.93	0.23636	L	2.52	0.14169	T	-0.05	0.07751	N	NM_014406.4	A380S	0.072	0.06067	-0.9413	0.42435	T	0.0190	0.07938	T	10	0.328585	0.12563	5.967	0.75658077739943641	0.10790	0.01742	0.05435	NAEFGBI	-0.952241553466705	0.4572448	0.09664	-0.959672568167129	0.10513	0.00151714177988376	0.08643	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	-0.865	0.10073	0.035000	0.13577	0.514000	0.28085	0.097000	0.22520	0.417000	0.25698	0.2835:0.437:0.2795:0.0	3.6701	0.07747	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072303	17072303	C	G	A	P	.	22	16591413	22	15452303	CCT8L2	-	GCC	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	380	0.168	0.22973	T	Q96SF2	TCPQM_HUMAN	380	0.231	0.28914	B	0.179	0.34149	B	0.904520	0.08589	N	0.938783	0.910584	0.27489	N	simple_aae	A380P	TCPQL_HUMAN	A380P	1.83	0.48223	L	2.43	0.15268	T	-2.6	0.55938	D	NM_014406.4	A380P	0.246	0.30065	-0.9532	0.40439	T	0.0355	0.15290	T	10	1.588787	0.25254	13.79	0.97019856529327109	0.31467	0.02096	0.06147	NAEFGBI	-0.653690275480882	0.8922109	0.17411	-0.724371843784986	0.16073	0.00151714177988376	0.08643	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	-0.865	0.10073	0.035000	0.13577	0.514000	0.28085	0.097000	0.22520	0.417000	0.25698	0.2835:0.437:0.2795:0.0	3.6701	0.07747	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072303	17072303	C	T	A	T	.	22	16591413	22	15452303	CCT8L2	-	GCC	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	380	0.011	0.55478	D	Q96SF2	TCPQM_HUMAN	380	0.62	0.38009	P	0.42	0.43281	B	0.904520	0.08589	U	0.938783	0.974599	0.25456	N	simple_aae	A380T	TCPQL_HUMAN	A380T	2.93	0.84781	M	2.38	0.15849	T	-1.63	0.39092	N	NM_014406.4	A380T	0.116	0.12740	-0.9890	0.32851	T	0.0565	0.23792	T	10	4.977856	0.66957	25.1	0.99619336564501015	0.75088	0.02107	0.06169	NAEFGBI	-0.366914589131182	1.4564	0.26729	-0.531429606692027	0.20917	0.00151714177988376	0.08643	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	-0.865	0.10073	0.035000	0.13577	0.514000	0.28085	0.097000	0.22520	0.417000	0.25698	0.2835:0.437:0.2795:0.0	3.6701	0.07747	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072305	17072305	C	A	G	V	.	22	16591415	22	15452305	CCT8L2	-	GGA	2	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	0.001	0.78421	D	Q96SF2	TCPQM_HUMAN	379	1.0	0.89865	D	0.997	0.85043	D	0.001429	0.39031	U	0.000000	0.999999	0.58814	D	simple_aae	G379V	TCPQL_HUMAN	G379V	3.235	0.89818	M	0.17	0.60507	T	-8.34	0.97032	D	NM_014406.4	G379V	0.823	0.81093	-0.3590	0.73312	T	0.3588	0.72112	T	10	5.317930	0.71958	25.8	0.99597950363474697	0.73827	0.12361	0.17034	NAEFGBI	0.180546234526767	3.218253	0.50322	-0.032189250061603	0.38380	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	0.304000	0.18840	0.514000	0.28085	0.101000	0.22602	0.430000	0.25913	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072305	17072305	C	G	G	A	.	22	16591415	22	15452305	CCT8L2	-	GGA	2	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	0.027	0.46462	D	Q96SF2	TCPQM_HUMAN	379	0.967	0.54448	D	0.893	0.61563	P	0.001429	0.39031	U	0.000000	0.96704	0.38563	D	simple_aae	G379A	TCPQL_HUMAN	G379A	2.085	0.57921	M	0.23	0.59737	T	-5.51	0.85890	D	NM_014406.4	G379A	0.638	0.65489	-0.5215	0.67883	T	0.2845	0.65659	T	10	1.587093	0.25234	13.78	0.95704074870341493	0.27016	0.10995	0.16155	N	AEFGBI	0.0767559827490708	2.795521	0.45442	-0.102097947215648	0.35323	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	0.304000	0.18840	0.514000	0.28085	0.101000	0.22602	0.430000	0.25913	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072305	17072305	C	T	G	E	.	22	16591415	22	15452305	CCT8L2	-	GGA	2	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	0.001	0.78421	D	Q96SF2	TCPQM_HUMAN	379	1.0	0.89865	D	0.998	0.87503	D	0.001429	0.39031	U	0.000000	0.987014	0.40521	D	simple_aae	G379E	TCPQL_HUMAN	G379E	3.235	0.89818	M	0.19	0.60258	T	-7.3	0.94470	D	NM_014406.4	G379E	0.87	0.85752	-0.3469	0.73662	T	0.3588	0.72112	T	10	4.934483	0.66331	25.0	0.99672190146911999	0.78475	0.09552	0.15110	NAEFGBI	0.180844068315063	3.219533	0.50337	-0.0319789254027045	0.38387	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	0.304000	0.18840	0.514000	0.28085	0.101000	0.22602	0.430000	0.25913	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072306	17072306	C	A	G	X	.	22	16591416	22	15452306	CCT8L2	-	GGA	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	.	.	.	.	.	.	.	.	.	.	.	.	0.001429	0.39031	U	0.000000	1	0.81033	D	complex_aae	G379*	TCPQL_HUMAN	G379*	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	10.820180	0.97019	36	0.99023181097119439	0.50228	0.42257	0.26601	N	AEFGBI	0.602300241062557	5.946894	0.73340	0.306416110176004	0.56174	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	3.203000	0.50530	0.514000	0.28085	0.341000	0.25456	0.437000	0.26030	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072306	17072306	C	G	G	R	.	22	16591416	22	15452306	CCT8L2	-	GGA	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	0.0	0.91219	D	Q96SF2	TCPQM_HUMAN	379	1.0	0.89865	D	0.999	0.91584	D	0.001429	0.39031	U	0.000000	0.988568	0.40787	D	simple_aae	G379R	TCPQL_HUMAN	G379R	3.235	0.89818	M	0.18	0.60383	T	-7.44	0.94858	D	NM_014406.4	G379R	0.835	0.82245	-0.3469	0.73662	T	0.3588	0.72112	T	10	5.462289	0.74129	26.1	0.99854462032636349	0.93313	0.43619	0.26900	NAEFGBI	0.317324963236638	3.869725	0.57083	0.12440239999813	0.46107	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	3.203000	0.50530	0.514000	0.28085	0.341000	0.25456	0.437000	0.26030	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072306	17072306	C	T	G	R	rs764133439	22	16591416	22	15452306	CCT8L2	-	GGA	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	0.0	0.91219	D	Q96SF2	TCPQM_HUMAN	379	1.0	0.89865	D	0.999	0.91584	D	0.001429	0.39031	U	0.000000	0.988568	0.40787	D	simple_aae	G379R	TCPQL_HUMAN	G379R	3.235	0.89818	M	0.18	0.60383	T	-7.44	0.94858	D	NM_014406.4	G379R	0.835	0.82245	-0.3469	0.73662	T	0.3588	0.72112	T	10	5.691531	0.77646	26.8	0.9985436076811024	0.93313	0.36787	0.25383	N	AEFGBI	0.317324963236638	3.869725	0.57083	0.12440239999813	0.46107	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	3.203000	0.50530	0.514000	0.28085	0.341000	0.25456	0.437000	0.26030	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	2	1.647e-05	2	1.647e-05	0	0	2	1.727e-04	0	0	0	0	0	0	0	0	21.883e-05	2	1.883e-05	0	0	2	1.783e-04	0	0	0	0	0	0	0	0	2	2.204e-05	2	2.204e-05	0	0	2	1.729e-04	0	0	0	0	0	0	0	0	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
tabix tests/dbnsfp/dbNSFP_ex.txt.gz
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072301	17072302	G	A	A	V	.	22	16591412	22	15452302	CCT8L2	-	GCC	2	0	g	G/G	G/G	ENSG00000198445	ENST00000359963	ENSP00000353048	380	0.01	0.56404	D	Q96SF2	TCPQM_HUMAN	380	0.789	0.42612	P	0.542	0.47084	P	0.904520	0.08589	U	0.938783	0.885143	0.27956	N	simple_aae	A380V	TCPQL_HUMAN	A380V	2.93	0.84781	M	2.34	0.16357	T	-3.1	0.63513	D	NM_014406.4	A380V	0.141	0.16484	-1.0168	0.24741	T	0.0721	0.29265	T	10	5.216332	0.70443	25.6	0.99874441920417656	0.95120	0.57787	0.30213	DAEFGBI	0.140898394235071	3.051114	0.48442	0.0299346018802206	0.41293	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	4.018000	0.56642	0.572000	0.28477	0.997000	0.39909	0.411000	0.25598	0.0:0.0:1.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072301	17072302	G	C	A	G	.	22	16591412	22	15452302	CCT8L2	-	GCC	2	0	g	G/G	G/G	ENSG00000198445	ENST00000359963	ENSP00000353048	380	0.033	0.44307	D	Q96SF2	TCPQM_HUMAN	380	0.09	0.23627	B	0.07	0.26378	B	0.904520	0.08589	U	0.938783	0.903476	0.27629	N	simple_aae	A380G	TCPQL_HUMAN	A380G	2.93	0.84781	M	2.51	0.14293	T	-2.32	0.51437	N	NM_014406.4	A380G	0.103	0.10746	-0.8882	0.49115	T	0.0370	0.15942	T	10	3.370940	0.46354	22.9	0.99354601284678379	0.60415	0.63209	0.31754	DAEFGBI	-0.422298261850935	1.3349	0.24762	-0.399121413419092	0.24558	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	4.018000	0.56642	0.572000	0.28477	0.997000	0.39909	0.411000	0.25598	0.0:0.0:1.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072301	17072302	G	T	A	D	.	22	16591412	22	15452302	CCT8L2	-	GCC	2	0	g	G/G	G/G	ENSG00000198445	ENST00000359963	ENSP00000353048	380	0.004	0.65363	D	Q96SF2	TCPQM_HUMAN	380	0.992	0.62897	D	0.889	0.61317	P	0.904520	0.08589	U	0.938783	0.641363	0.30591	N	simple_aae	A380D	TCPQL_HUMAN	A380D	2.93	0.84781	M	2.38	0.15849	T	-3.02	0.62590	D	NM_014406.4	A380D	0.399	0.45798	-0.9564	0.39865	T	0.0994	0.37051	T	10	5.077183	0.68398	25.3	0.99680235566444375	0.79002	0.61538	0.31252	DAEFGBI	0.302961726972868	3.794568	0.56349	0.143990621275748	0.47151	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	4.018000	0.56642	0.572000	0.28477	0.997000	0.39909	0.411000	0.25598	0.0:0.0:1.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072302	17072303	C	A	A	S	.	22	16591413	22	15452303	CCT8L2	-	GCC	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	380	1.0	0.00963	T	Q96SF2	TCPQM_HUMAN	380	0.09	0.23627	B	0.07	0.26378	B	0.904520	0.08589	N	0.938783	0.988396	0.24389	N	simple_aae	A380S	TCPQL_HUMAN	A380S	0.93	0.23636	L	2.52	0.14169	T	-0.05	0.07751	N	NM_014406.4	A380S	0.072	0.06067	-0.9413	0.42435	T	0.0190	0.07938	T	10	0.328585	0.12563	5.967	0.75658077739943641	0.10790	0.01742	0.05435	NAEFGBI	-0.952241553466705	0.4572448	0.09664	-0.959672568167129	0.10513	0.00151714177988376	0.08643	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	-0.865	0.10073	0.035000	0.13577	0.514000	0.28085	0.097000	0.22520	0.417000	0.25698	0.2835:0.437:0.2795:0.0	3.6701	0.07747	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072302	17072303	C	G	A	P	.	22	16591413	22	15452303	CCT8L2	-	GCC	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	380	0.168	0.22973	T	Q96SF2	TCPQM_HUMAN	380	0.231	0.28914	B	0.179	0.34149	B	0.904520	0.08589	N	0.938783	0.910584	0.27489	N	simple_aae	A380P	TCPQL_HUMAN	A380P	1.83	0.48223	L	2.43	0.15268	T	-2.6	0.55938	D	NM_014406.4	A380P	0.246	0.30065	-0.9532	0.40439	T	0.0355	0.15290	T	10	1.588787	0.25254	13.79	0.97019856529327109	0.31467	0.02096	0.06147	NAEFGBI	-0.653690275480882	0.8922109	0.17411	-0.724371843784986	0.16073	0.00151714177988376	0.08643	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	-0.865	0.10073	0.035000	0.13577	0.514000	0.28085	0.097000	0.22520	0.417000	0.25698	0.2835:0.437:0.2795:0.0	3.6701	0.07747	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072302	17072303	C	T	A	T	.	22	16591413	22	15452303	CCT8L2	-	GCC	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	380	0.011	0.55478	D	Q96SF2	TCPQM_HUMAN	380	0.62	0.38009	P	0.42	0.43281	B	0.904520	0.08589	U	0.938783	0.974599	0.25456	N	simple_aae	A380T	TCPQL_HUMAN	A380T	2.93	0.84781	M	2.38	0.15849	T	-1.63	0.39092	N	NM_014406.4	A380T	0.116	0.12740	-0.9890	0.32851	T	0.0565	0.23792	T	10	4.977856	0.66957	25.1	0.99619336564501015	0.75088	0.02107	0.06169	NAEFGBI	-0.366914589131182	1.4564	0.26729	-0.531429606692027	0.20917	0.00151714177988376	0.08643	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	-0.865	0.10073	0.035000	0.13577	0.514000	0.28085	0.097000	0.22520	0.417000	0.25698	0.2835:0.437:0.2795:0.0	3.6701	0.07747	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072304	17072305	C	A	G	V	.	22	16591415	22	15452305	CCT8L2	-	GGA	2	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	0.001	0.78421	D	Q96SF2	TCPQM_HUMAN	379	1.0	0.89865	D	0.997	0.85043	D	0.001429	0.39031	U	0.000000	0.999999	0.58814	D	simple_aae	G379V	TCPQL_HUMAN	G379V	3.235	0.89818	M	0.17	0.60507	T	-8.34	0.97032	D	NM_014406.4	G379V	0.823	0.81093	-0.3590	0.73312	T	0.3588	0.72112	T	10	5.317930	0.71958	25.8	0.99597950363474697	0.73827	0.12361	0.17034	NAEFGBI	0.180546234526767	3.218253	0.50322	-0.032189250061603	0.38380	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	0.304000	0.18840	0.514000	0.28085	0.101000	0.22602	0.430000	0.25913	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072304	17072305	C	G	G	A	.	22	16591415	22	15452305	CCT8L2	-	GGA	2	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	0.027	0.46462	D	Q96SF2	TCPQM_HUMAN	379	0.967	0.54448	D	0.893	0.61563	P	0.001429	0.39031	U	0.000000	0.96704	0.38563	D	simple_aae	G379A	TCPQL_HUMAN	G379A	2.085	0.57921	M	0.23	0.59737	T	-5.51	0.85890	D	NM_014406.4	G379A	0.638	0.65489	-0.5215	0.67883	T	0.2845	0.65659	T	10	1.587093	0.25234	13.78	0.95704074870341493	0.27016	0.10995	0.16155	N	AEFGBI	0.0767559827490708	2.795521	0.45442	-0.102097947215648	0.35323	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	0.304000	0.18840	0.514000	0.28085	0.101000	0.22602	0.430000	0.25913	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072304	17072305	C	T	G	E	.	22	16591415	22	15452305	CCT8L2	-	GGA	2	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	0.001	0.78421	D	Q96SF2	TCPQM_HUMAN	379	1.0	0.89865	D	0.998	0.87503	D	0.001429	0.39031	U	0.000000	0.987014	0.40521	D	simple_aae	G379E	TCPQL_HUMAN	G379E	3.235	0.89818	M	0.19	0.60258	T	-7.3	0.94470	D	NM_014406.4	G379E	0.87	0.85752	-0.3469	0.73662	T	0.3588	0.72112	T	10	4.934483	0.66331	25.0	0.99672190146911999	0.78475	0.09552	0.15110	NAEFGBI	0.180844068315063	3.219533	0.50337	-0.0319789254027045	0.38387	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	0.304000	0.18840	0.514000	0.28085	0.101000	0.22602	0.430000	0.25913	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072305	17072306	C	A	G	X	.	22	16591416	22	15452306	CCT8L2	-	GGA	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	.	.	.	.	.	.	.	.	.	.	.	.	0.001429	0.39031	U	0.000000	1	0.81033	D	complex_aae	G379*	TCPQL_HUMAN	G379*	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	10.820180	0.97019	36	0.99023181097119439	0.50228	0.42257	0.26601	N	AEFGBI	0.602300241062557	5.946894	0.73340	0.306416110176004	0.56174	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	3.203000	0.50530	0.514000	0.28085	0.341000	0.25456	0.437000	0.26030	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072305	17072306	C	G	G	R	.	22	16591416	22	15452306	CCT8L2	-	GGA	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	0.0	0.91219	D	Q96SF2	TCPQM_HUMAN	379	1.0	0.89865	D	0.999	0.91584	D	0.001429	0.39031	U	0.000000	0.988568	0.40787	D	simple_aae	G379R	TCPQL_HUMAN	G379R	3.235	0.89818	M	0.18	0.60383	T	-7.44	0.94858	D	NM_014406.4	G379R	0.835	0.82245	-0.3469	0.73662	T	0.3588	0.72112	T	10	5.462289	0.74129	26.1	0.99854462032636349	0.93313	0.43619	0.26900	NAEFGBI	0.317324963236638	3.869725	0.57083	0.12440239999813	0.46107	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	3.203000	0.50530	0.514000	0.28085	0.341000	0.25456	0.437000	0.26030	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	...	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "22	17072305	17072306	C	T	G	R	rs764133439	22	16591416	22	15452306	CCT8L2	-	GGA	1	0	c	C/C	C/C	ENSG00000198445	ENST00000359963	ENSP00000353048	379	0.0	0.91219	D	Q96SF2	TCPQM_HUMAN	379	1.0	0.89865	D	0.999	0.91584	D	0.001429	0.39031	U	0.000000	0.988568	0.40787	D	simple_aae	G379R	TCPQL_HUMAN	G379R	3.235	0.89818	M	0.18	0.60383	T	-7.44	0.94858	D	NM_014406.4	G379R	0.835	0.82245	-0.3469	0.73662	T	0.3588	0.72112	T	10	5.691531	0.77646	26.8	0.9985436076811024	0.93313	0.36787	0.25383	N	AEFGBI	0.317324963236638	3.869725	0.57083	0.12440239999813	0.46107	0.00799435000615469	0.11615	0.487112	0.13308	0	0.573888	0.26071	0	0.547309	0.14640	0	0.564101	0.26208	0	1.98	1.98	0.25231	3.203000	0.50530	0.514000	0.28085	0.341000	0.25456	0.437000	0.26030	0.0:1.0:0.0:0.0	7.4423	0.26198	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	2	1.647e-05	2	1.647e-05	0	0	2	1.727e-04	0	0	0	0	0	0	0	0	21.883e-05	2	1.883e-05	0	0	2	1.783e-04	0	0	0	0	0	0	0	0	2	2.204e-05	2	2.204e-05	0	0	2	1.729e-04	0	0	0	0	0	0	0	0	.	.	.	.	TCP-1-like chaperonin intermediate domain	.	."
tabix tests/id-test/cosmic.small.vcf.gz
tabix tests/id-test/dbsnp.small.vcf.gz
tabix tests/id-test/small.vcf.gz
tabix tests/multiple-alts/ma-db.vcf.gz
tabix tests/notbgz/gno.vcf.gz
tabix tests/overwrite-multiple-alts/a/whole.vcf.gz
tabix tests/overwrite-multiple-alts/b/cadd_indels.vcf.gz
tabix tests/overwrite-multiple-alts/b/whole_genome_snv_slice.vcf.gz
tabix tests/ref-alt-test/tmp_annotation.txt.gz
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "1	14397	rs756427959	CTGT	C	530	71	0.1340	194	71	0	460	59	0.1283	171	59	0	304	36	0.1184	116	36	0	94	11	0.1170	36	11	0"
[E::get_intv] Failed to parse TBX_GENERIC, was wrong -p [type] used?
The offending line was: "1	14397	rs756427959	CTGT	CT	530	0	0.0000	265	0	0	460	0	0.0000	230	0	0	304	0	0.0000	152	0	0	94	0	0.0000	47	0	0"
tabix tests/ref-alt-test/tmp_calls.vcf.gz
tabix tests/testVA/test-gnomad.vcf.gz
tabix docs/examples/gff_sv/genes.gff3.gz
dh_installdocs
make[1]: Leaving directory '/build/vcfanno-UujVNV/vcfanno-0.3.2+ds'
   dh_installchangelogs -i -O--buildsystem=golang
   dh_installman -i -O--buildsystem=golang
   dh_installsystemduser -i -O--buildsystem=golang
   dh_perl -i -O--buildsystem=golang
   dh_link -i -O--buildsystem=golang
   dh_strip_nondeterminism -i -O--buildsystem=golang
   dh_compress -i -O--buildsystem=golang
   dh_fixperms -i -O--buildsystem=golang
   dh_missing -i -O--buildsystem=golang
   dh_installdeb -i -O--buildsystem=golang
   dh_golang -i -O--buildsystem=golang
Use of uninitialized value $caller in string eq at /usr/share/perl5/Debian/Debhelper/Buildsystem/golang.pm line 567.
   dh_gencontrol -i -O--buildsystem=golang
dpkg-gencontrol: warning: Depends field of package vcfanno-examples: substitution variable ${shlibs:Depends} used, but is not defined
   dh_md5sums -i -O--buildsystem=golang
   dh_builddeb -i -O--buildsystem=golang
dpkg-deb: building package 'vcfanno-examples' in '../vcfanno-examples_0.3.2+ds-2_all.deb'.
 dpkg-genbuildinfo --build=all
 dpkg-genchanges --build=all >../vcfanno_0.3.2+ds-2_all.changes
dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
I: running special hook: sync-out /build/vcfanno-UujVNV /tmp/vcfanno-0.3.2+ds-2qk68nwwf
I: cleaning package lists and apt cache...
I: creating tarball...
I: done
I: removing tempdir /tmp/mmdebstrap.aFz0bBhlwn...
I: success in 623.6422 seconds
md5: vcfanno-examples_0.3.2+ds-2_all.deb: OK
sha1: vcfanno-examples_0.3.2+ds-2_all.deb: OK
sha256: vcfanno-examples_0.3.2+ds-2_all.deb: OK
Checksums: OK