Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/u/umap-learn/umap-learn_0.4.5+dfsg-2_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/umap-learn-0.4.5+dfsg-2jkoap0u9/umap-learn_0.4.5+dfsg-2_all.buildinfo Get source package info: umap-learn=0.4.5+dfsg-2 Source URL: http://snapshot.notset.fr/mr/package/umap-learn/0.4.5+dfsg-2/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11.1 automake=1:1.16.2-3 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.47 bash=5.0-6 binfmt-support=2.2.1-1 binutils=2.34.90.20200706-1 binutils-common=2.34.90.20200706-1 binutils-x86-64-linux-gnu=2.34.90.20200706-1 bsdextrautils=2.35.2-7 bsdutils=1:2.35.2-7 build-essential=12.8 bzip2=1.0.8-3 coreutils=8.32-2 cpp=4:9.2.1-3.1 cpp-9=9.3.0-15 dash=0.5.10.2-7 debconf=1.5.74 debhelper=13.2 debianutils=4.11 dh-autoreconf=19 dh-python=4.20200315 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13-5 file=1:5.38-5 findutils=4.7.0-1 g++=4:9.2.1-3.1 g++-9=9.3.0-15 gcc=4:9.2.1-3.1 gcc-10-base=10.1.0-6 gcc-9=9.3.0-15 gcc-9-base=9.3.0-15 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 grep=3.4-1 groff-base=1.22.4-5 gzip=1.10-2 hostname=3.23 init-system-helpers=1.58 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libasan5=9.3.0-15 libatomic1=10.1.0-6 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3 libaudit1=1:2.8.5-3+b1 libbinutils=2.34.90.20200706-1 libblas3=3.9.0-2 libblkid1=2.35.2-7 libbsd0=0.10.0-1 libbz2-1.0=1.0.8-3 libc-bin=2.31-1 libc-dev-bin=2.31-1 libc6=2.31-1 libc6-dev=2.31-1 libcap-ng0=0.7.9-2.2 libcc1-0=10.1.0-6 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.16-1 libcrypt1=1:4.4.16-1 libctf-nobfd0=2.34.90.20200706-1 libctf0=2.34.90.20200706-1 libdb5.3=5.3.28+dfsg1-0.6 libdebconfclient0=0.253 libdebhelper-perl=13.2 libdpkg-perl=1.20.5 libedit2=3.1-20191231-1 libelf1=0.176-1.1 libexpat1=2.2.9-1 libffi7=3.3-4 libfile-stripnondeterminism-perl=1.9.0-1 libgcc-9-dev=9.3.0-15 libgcc-s1=10.1.0-6 libgcrypt20=1.8.6-2 libgdbm-compat4=1.18.1-5 libgdbm6=1.18.1-5 libgfortran5=10.1.0-6 libglib2.0-0=2.64.4-1 libgmp10=2:6.2.0+dfsg-6 libgomp1=10.1.0-6 libgpg-error0=1.38-2 libicu67=67.1-3 libisl22=0.22.1-1 libitm1=10.1.0-6 liblapack3=3.9.0-2 liblbfgsb0=3.0+dfsg.3-8 libllvm9=1:9.0.1-13 liblsan0=10.1.0-6 liblz4-1=1.9.2-2 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.38-5 libmagic1=1:5.38-5 libmount1=2.35.2-7 libmpc3=1.1.0-1 libmpdec2=2.4.2-3 libmpfr6=4.1.0-3 libncurses6=6.2-1 libncursesw6=6.2-1 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpcre2-8-0=10.34-7 libpcre3=2:8.39-13 libperl5.30=5.30.3-4 libpfm4=4.10.1+git44-ga2909cd-1 libpipeline1=1.5.2-2 libprocps8=2:3.3.16-5 libpython3-stdlib=3.8.2-3 libpython3.8-minimal=3.8.4-1 libpython3.8-stdlib=3.8.4-1 libquadmath0=10.1.0-6 libreadline8=8.0-4 libseccomp2=2.4.3-1+b1 libselinux1=3.1-1 libsigsegv2=2.12-2 libsmartcols1=2.35.2-7 libsqlite3-0=3.32.3-1 libssl1.1=1.1.1g-1 libstdc++-9-dev=9.3.0-15 libstdc++6=10.1.0-6 libsub-override-perl=0.09-2 libsystemd0=245.6-2 libtbb2=2020.2-2 libtinfo6=6.2-1 libtool=2.4.6-14 libtsan0=10.1.0-6 libubsan1=10.1.0-6 libuchardet0=0.0.7-1 libudev1=245.6-2 libunistring2=0.9.10-4 libuuid1=2.35.2-7 libxml2=2.9.10+dfsg-5+b1 libz3-4=4.8.8-1 linux-libc-dev=5.7.6-1 llvm-9=1:9.0.1-13 llvm-9-runtime=1:9.0.1-13 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 mime-support=3.64 ncurses-base=6.2-1 ncurses-bin=6.2-1 patch=2.7.6-6 perl=5.30.3-4 perl-base=5.30.3-4 perl-modules-5.30=5.30.3-4 po-debconf=1.0.21 procps=2:3.3.16-5 python3=3.8.2-3 python3-atomicwrites=1.4.0-1 python3-attr=19.3.0-5 python3-decorator=4.4.2-2 python3-distutils=3.8.4-1 python3-importlib-metadata=1.6.0-2 python3-joblib=0.14.0-3 python3-lib2to3=3.8.4-1 python3-llvmlite=0.33.0-1 python3-minimal=3.8.2-3 python3-more-itertools=4.2.0-3 python3-nose=1.3.7-6 python3-numba=0.50.1-2 python3-numpy=1:1.19.0-1 python3-packaging=20.3-1.2 python3-pkg-resources=46.1.3-1 python3-pluggy=0.13.0-5 python3-py=1.8.1-3 python3-pyparsing=2.4.7-1 python3-pytest=4.6.11-1 python3-scipy=1.4.1-2 python3-setuptools=46.1.3-1 python3-six=1.15.0-1 python3-sklearn=0.22.2.post1+dfsg-7 python3-sklearn-lib=0.22.2.post1+dfsg-7 python3-wcwidth=0.1.9+dfsg1-2 python3-zipp=1.0.0-3 python3.8=3.8.4-1 python3.8-minimal=3.8.4-1 readline-common=8.0-4 sed=4.7-1 sensible-utils=0.0.12+nmu1 sysvinit-utils=2.96-3 tar=1.30+dfsg-7 util-linux=2.35.2-7 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20200716T145301Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d umap-learn=0.4.5+dfsg-2 && mkdir -p /build/umap-learn-DrPn87 && dpkg-source --no-check -x /*.dsc /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg && chown -R builduser:builduser /build/umap-learn-DrPn87" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1594901648" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/umap-learn-DrPn87 /tmp/umap-learn-0.4.5+dfsg-2jkoap0u9 bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20200716T145301Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.uy8GgtIJOb as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.uy8GgtIJOb Reading package lists... Building dependency tree... util-linux is already the newest version (2.35.2-7). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 132 kB of archives. After this operation, 393 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20200716T145301Z unstable/main amd64 libfakeroot amd64 1.24-1 [45.7 kB] Get:2 http://snapshot.notset.fr/archive/debian/20200716T145301Z unstable/main amd64 fakeroot amd64 1.24-1 [85.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 132 kB in 0s (1024 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4579 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.24-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.24-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.24-1_amd64.deb ... Unpacking fakeroot (1.24-1) ... Setting up libfakeroot:amd64 (1.24-1) ... Setting up fakeroot (1.24-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-1) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20200716T145301Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.uy8GgtIJOb Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20200716T145301Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 21s (1079 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.uy8GgtIJOb I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d umap-learn=0.4.5+dfsg-2 && mkdir -p /build/umap-learn-DrPn87 && dpkg-source --no-check -x /*.dsc /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg && chown -R builduser:builduser /build/umap-learn-DrPn87"' exec /tmp/mmdebstrap.uy8GgtIJOb Reading package lists... NOTICE: 'umap-learn' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/umap-learn.git Please use: git clone https://salsa.debian.org/med-team/umap-learn.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 978 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main umap-learn 0.4.5+dfsg-2 (dsc) [2292 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main umap-learn 0.4.5+dfsg-2 (tar) [971 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main umap-learn 0.4.5+dfsg-2 (diff) [4952 B] Fetched 978 kB in 1s (1253 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'umap-learn_0.4.5+dfsg-2.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting umap-learn in /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg dpkg-source: info: unpacking umap-learn_0.4.5+dfsg.orig.tar.xz dpkg-source: info: unpacking umap-learn_0.4.5+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying do_not_check_for_tbb.patch dpkg-source: info: applying disable-and-fix-incompatible-tests.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1594901648" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.uy8GgtIJOb dpkg-buildpackage: info: source package umap-learn dpkg-buildpackage: info: source version 0.4.5+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:217: python3.8 setup.py clean running clean removing '/build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.8' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-indep dh binary-indep --with python3 --buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_autoreconf -i -O--buildsystem=pybuild dh_auto_configure -i -O--buildsystem=pybuild I: pybuild base:217: python3.8 setup.py config running config dh_auto_build -i -O--buildsystem=pybuild I: pybuild base:217: /usr/bin/python3 setup.py build running build running build_py creating /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/sparse_nndescent.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/plot.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/__init__.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/umap_.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/distances.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/nndescent.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/rp_tree.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/spectral.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/validation.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/sparse.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/utils.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap copying umap/layouts.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap debian/rules override_dh_auto_test make[1]: Entering directory '/build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg' dh_auto_test -- --system=custom --test-args="PYTHONPATH={build_dir} {interpreter} -m pytest" I: pybuild base:217: PYTHONPATH=/build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build python3.8 -m pytest ============================= test session starts ============================== platform linux -- Python 3.8.4, pytest-4.6.11, py-1.8.1, pluggy-0.13.0 rootdir: /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg collected 128 items umap/tests/test_plot.py .xx [ 2%] umap/tests/test_umap_df_validation_params.py ................... [ 17%] umap/tests/test_umap_metrics.py ........................................ [ 48%] . [ 49%] umap/tests/test_umap_nn.py ............ [ 58%] umap/tests/test_umap_on_iris.py ........ [ 64%] umap/tests/test_umap_ops.py .... [ 67%] umap/tests/test_umap_repeated_data.py ......... [ 75%] umap/tests/test_umap_trustworthiness.py ......... [ 82%] umap/tests/test_umap_validation_params.py ....................... [100%] =============================== warnings summary =============================== umap/distances.py:24 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:24: DeprecationWarning: invalid escape sequence \s """Standard euclidean distance. umap/distances.py:37 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:37: DeprecationWarning: invalid escape sequence \s """Standard euclidean distance and its gradient. umap/distances.py:53 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:53: DeprecationWarning: invalid escape sequence \s """Euclidean distance standardised against a vector of standard umap/distances.py:68 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:68: DeprecationWarning: invalid escape sequence \s """Euclidean distance standardised against a vector of standard umap/distances.py:84 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:84: DeprecationWarning: invalid escape sequence \s """Manhattan, taxicab, or l1 distance. umap/distances.py:98 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:98: DeprecationWarning: invalid escape sequence \s """Manhattan, taxicab, or l1 distance with gradient. umap/distances.py:113 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:113: DeprecationWarning: invalid escape sequence \m """Chebyshev or l-infinity distance. umap/distances.py:127 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:127: DeprecationWarning: invalid escape sequence \m """Chebyshev or l-infinity distance with gradient. umap/distances.py:147 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:147: DeprecationWarning: invalid escape sequence \l """Minkowski distance. umap/distances.py:166 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:166: DeprecationWarning: invalid escape sequence \l """Minkowski distance with gradient. umap/distances.py:193 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:193: DeprecationWarning: invalid escape sequence \d """Poincare distance. umap/distances.py:230 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:230: DeprecationWarning: invalid escape sequence \l """A weighted version of Minkowski distance. umap/distances.py:248 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:248: DeprecationWarning: invalid escape sequence \l """A weighted version of Minkowski distance with gradient. umap/distances.py:752 /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/distances.py:752: DeprecationWarning: invalid escape sequence \l """ umap/tests/test_plot.py::test_umap_plot_dependency /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/plot.py:20: UserWarning: The umap.plot package requires extra plotting libraries to be installed. You can install these via pip using pip install umap-learn[plot] or via conda using conda install pandas matplotlib datashader bokeh holoviews colorcet warn( umap/tests/test_umap_metrics.py::test_hellinger /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/tests/test_umap_metrics.py:396: RuntimeWarning: invalid value encountered in sqrt dist_matrix = np.sqrt(dist_matrix) umap/tests/test_umap_ops.py::test_multi_component_layout /usr/lib/python3/dist-packages/sklearn/manifold/_spectral_embedding.py:236: UserWarning: Graph is not fully connected, spectral embedding may not work as expected. warnings.warn("Graph is not fully connected, spectral embedding" umap/tests/test_umap_repeated_data.py::test_repeated_points_large_sparse_spatial umap/tests/test_umap_repeated_data.py::test_repeated_points_small_sparse_spatial umap/tests/test_umap_repeated_data.py::test_repeated_points_large_sparse_binary umap/tests/test_umap_repeated_data.py::test_repeated_points_small_sparse_binary /usr/lib/python3/dist-packages/numpy/core/_asarray.py:136: VisibleDeprecationWarning: Creating an ndarray from ragged nested sequences (which is a list-or-tuple of lists-or-tuples-or ndarrays with different lengths or shapes) is deprecated. If you meant to do this, you must specify 'dtype=object' when creating the ndarray return array(a, dtype, copy=False, order=order, subok=True) umap/tests/test_umap_repeated_data.py::test_repeated_points_large_n umap/tests/test_umap_validation_params.py::test_umap_too_many_neighbors_warns /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/umap_.py:1678: UserWarning: n_neighbors is larger than the dataset size; truncating to X.shape[0] - 1 warn( umap/tests/test_umap_trustworthiness.py::test_string_metric_supervised_umap_trustworthiness /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/umap/umap_.py:1867: FutureWarning: Beginning in version 0.22, arrays of bytes/strings will be converted to decimal numbers if dtype='numeric'. It is recommended that you convert the array to a float dtype before using it in scikit-learn, for example by using your_array = your_array.astype(np.float64). y_ = check_array(y, ensure_2d=False)[index] -- Docs: https://docs.pytest.org/en/latest/warnings.html ============= 126 passed, 2 xfailed, 24 warnings in 425.18 seconds ============= make[1]: Leaving directory '/build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -i -O--buildsystem=pybuild dh_prep -i -O--buildsystem=pybuild dh_auto_install -i -O--buildsystem=pybuild I: pybuild base:217: /usr/bin/python3 setup.py install --root /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn running install running build running build_py running install_lib creating /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr creating /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib creating /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8 creating /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages creating /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/sparse_nndescent.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/plot.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/__init__.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/umap_.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/distances.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/nndescent.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/rp_tree.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/spectral.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/validation.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/sparse.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/utils.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap copying /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/.pybuild/cpython3_3.8/build/umap/layouts.py -> /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/sparse_nndescent.py to sparse_nndescent.cpython-38.pyc byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/plot.py to plot.cpython-38.pyc byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/__init__.py to __init__.cpython-38.pyc byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/umap_.py to umap_.cpython-38.pyc byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/distances.py to distances.cpython-38.pyc byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/nndescent.py to nndescent.cpython-38.pyc byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/rp_tree.py to rp_tree.cpython-38.pyc byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/spectral.py to spectral.cpython-38.pyc byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/validation.py to validation.cpython-38.pyc byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/sparse.py to sparse.cpython-38.pyc byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/utils.py to utils.cpython-38.pyc byte-compiling /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap/layouts.py to layouts.cpython-38.pyc running install_egg_info running egg_info creating umap_learn.egg-info writing umap_learn.egg-info/PKG-INFO writing dependency_links to umap_learn.egg-info/dependency_links.txt writing requirements to umap_learn.egg-info/requires.txt writing top-level names to umap_learn.egg-info/top_level.txt writing manifest file 'umap_learn.egg-info/SOURCES.txt' reading manifest file 'umap_learn.egg-info/SOURCES.txt' writing manifest file 'umap_learn.egg-info/SOURCES.txt' Copying umap_learn.egg-info to /build/umap-learn-DrPn87/umap-learn-0.4.5+dfsg/debian/umap-learn/usr/lib/python3.8/dist-packages/umap_learn-0.4.5.egg-info Skipping SOURCES.txt running install_scripts dh_installdocs -i -O--buildsystem=pybuild dh_installchangelogs -i -O--buildsystem=pybuild dh_installexamples -i -O--buildsystem=pybuild dh_python3 -i -O--buildsystem=pybuild dh_installsystemduser -i -O--buildsystem=pybuild dh_perl -i -O--buildsystem=pybuild dh_link -i -O--buildsystem=pybuild dh_strip_nondeterminism -i -O--buildsystem=pybuild dh_compress -i -O--buildsystem=pybuild dh_fixperms -i -O--buildsystem=pybuild dh_missing -i -O--buildsystem=pybuild dh_installdeb -i -O--buildsystem=pybuild dh_gencontrol -i -O--buildsystem=pybuild dh_md5sums -i -O--buildsystem=pybuild dh_builddeb -i -O--buildsystem=pybuild dpkg-deb: building package 'umap-learn' in '../umap-learn_0.4.5+dfsg-2_all.deb'. dpkg-genbuildinfo --build=all dpkg-genchanges --build=all >../umap-learn_0.4.5+dfsg-2_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/umap-learn-DrPn87 /tmp/umap-learn-0.4.5+dfsg-2jkoap0u9 I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.uy8GgtIJOb... I: success in 898.5505 seconds md5: umap-learn_0.4.5+dfsg-2_all.deb: OK sha1: umap-learn_0.4.5+dfsg-2_all.deb: OK sha256: umap-learn_0.4.5+dfsg-2_all.deb: OK Checksums: OK