Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/t/toppic/toppic_1.3.0+dfsg1-4_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/toppic-1.3.0+dfsg1-47iu4qd5x/toppic_1.3.0+dfsg1-4_all.buildinfo Get source package info: toppic=1.3.0+dfsg1-4 Source URL: http://snapshot.notset.fr/mr/package/toppic/1.3.0+dfsg1-4/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11.1 automake=1:1.16.2-4 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.48 bash=5.1~rc2-1 binutils=2.35.1-2 binutils-common=2.35.1-2 binutils-x86-64-linux-gnu=2.35.1-2 bsdextrautils=2.36-3+b2 bsdutils=1:2.36-3+b2 build-essential=12.8 bzip2=1.0.8-4 cmake=3.18.4-1 cmake-data=3.18.4-1 coreutils=8.32-4+b1 cpp=4:10.2.0-1 cpp-10=10.2.0-16 dash=0.5.10.2-7 debconf=1.5.74 debhelper=13.2.1 debianutils=4.11.2 dh-autoreconf=19 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 docutils-common=0.16+dfsg-3 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13-5 file=1:5.38-5 findutils=4.7.0+git20201010-2 fontconfig=2.13.1-4.2 fontconfig-config=2.13.1-4.2 fonts-dejavu-core=2.37-2 fonts-font-awesome=5.0.10+really4.7.0~dfsg-2 fonts-freefont-ttf=20120503-10 g++=4:10.2.0-1 g++-10=10.2.0-16 gcc=4:10.2.0-1 gcc-10=10.2.0-16 gcc-10-base=10.2.0-16 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 grep=3.4-1 groff-base=1.22.4-5 gzip=1.10-2 hostname=3.23 icu-devtools=67.1-4 init-system-helpers=1.58 intltool-debian=0.35.0+20060710.5 javascript-common=11 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libarchive13=3.4.3-2 libasan6=10.2.0-16 libatomic1=10.2.0-16 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3.1 libaudit1=1:2.8.5-3.1 libavahi-client3=0.8-3 libavahi-common-data=0.8-3 libavahi-common3=0.8-3 libbinutils=2.35.1-2 libblkid1=2.36-3+b2 libboost-atomic1.71-dev=1.71.0-7+b1 libboost-atomic1.71.0=1.71.0-7+b1 libboost-chrono-dev=1.71.0.3 libboost-chrono1.71-dev=1.71.0-7+b1 libboost-chrono1.71.0=1.71.0-7+b1 libboost-date-time1.71-dev=1.71.0-7+b1 libboost-date-time1.71.0=1.71.0-7+b1 libboost-dev=1.71.0.3 libboost-filesystem-dev=1.71.0.3 libboost-filesystem1.71-dev=1.71.0-7+b1 libboost-filesystem1.71.0=1.71.0-7+b1 libboost-iostreams-dev=1.71.0.3 libboost-iostreams1.71-dev=1.71.0-7+b1 libboost-iostreams1.71.0=1.71.0-7+b1 libboost-program-options-dev=1.71.0.3 libboost-program-options1.71-dev=1.71.0-7+b1 libboost-program-options1.71.0=1.71.0-7+b1 libboost-regex1.71-dev=1.71.0-7+b1 libboost-regex1.71.0=1.71.0-7+b1 libboost-serialization1.71-dev=1.71.0-7+b1 libboost-serialization1.71.0=1.71.0-7+b1 libboost-system-dev=1.71.0.3 libboost-system1.71-dev=1.71.0-7+b1 libboost-system1.71.0=1.71.0-7+b1 libboost-thread-dev=1.71.0.3 libboost-thread1.71-dev=1.71.0-7+b1 libboost-thread1.71.0=1.71.0-7+b1 libboost1.71-dev=1.71.0-7+b1 libbrotli1=1.0.9-2+b1 libbsd0=0.10.0-1 libbz2-1.0=1.0.8-4 libc-bin=2.31-4 libc-dev-bin=2.31-4 libc6=2.31-4 libc6-dev=2.31-4 libcap-ng0=0.7.9-2.2 libcc1-0=10.2.0-16 libcom-err2=1.45.6-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.1-2 libctf0=2.35.1-2 libcups2=2.3.3-3 libcurl3-gnutls=7.72.0-1 libcurl4=7.72.0-1 libcurl4-gnutls-dev=7.72.0-1 libdb5.3=5.3.28+dfsg1-0.6 libdbus-1-3=1.12.20-1 libdebconfclient0=0.255 libdebhelper-perl=13.2.1 libdeflate-dev=1.6-1 libdeflate0=1.6-1 libdouble-conversion3=3.1.5-6 libdpkg-perl=1.20.5 libdrm-amdgpu1=2.4.103-1 libdrm-common=2.4.103-1 libdrm-intel1=2.4.103-1 libdrm-nouveau2=2.4.103-1 libdrm-radeon1=2.4.103-1 libdrm2=2.4.103-1 libedit2=3.1-20191231-1 libegl-dev=1.3.2-1 libegl-mesa0=20.2.2-1 libegl1=1.3.2-1 libelf1=0.182-1 libevdev2=1.10.0+dfsg-1 libexpat1=2.2.10-1 libffi7=3.3-4 libfile-stripnondeterminism-perl=1.9.0-1 libfontconfig1=2.13.1-4.2 libfreetype6=2.10.2+dfsg-4 libgbm1=20.2.2-1 libgcc-10-dev=10.2.0-16 libgcc-s1=10.2.0-16 libgcrypt20=1.8.7-2 libgdbm-compat4=1.18.1-5.1 libgdbm6=1.18.1-5.1 libgl-dev=1.3.2-1 libgl1=1.3.2-1 libgl1-mesa-dri=20.2.2-1 libglapi-mesa=20.2.2-1 libglib2.0-0=2.66.2-1 libglu1-mesa=9.0.1-1 libglu1-mesa-dev=9.0.1-1 libglvnd0=1.3.2-1 libglx-dev=1.3.2-1 libglx-mesa0=20.2.2-1 libglx0=1.3.2-1 libgmp10=2:6.2.0+dfsg-6 libgnutls30=3.6.15-4 libgomp1=10.2.0-16 libgpg-error0=1.38-2 libgraphite2-3=1.3.14-1 libgssapi-krb5-2=1.17-10 libgudev-1.0-0=234-1 libharfbuzz0b=2.6.7-1 libhogweed6=3.6-2 libhts-dev=1.11-2 libhts3=1.11-2 libice6=2:1.0.10-1 libicu-dev=67.1-4 libicu67=67.1-4 libidn2-0=2.3.0-2 libinput-bin=1.16.2-1 libinput10=1.16.2-1 libisl22=0.22.1-1 libitm1=10.2.0-16 libjpeg62-turbo=1:2.0.5-1.1 libjs-bootstrap4=4.5.2+dfsg1-1 libjs-filesaver=2.0.2+dfsg-3 libjs-jquery=3.5.1+dfsg+~3.5.4-1 libjs-jquery-ui=1.12.1+dfsg-7 libjs-popper.js=1.16.1+ds-2 libjsoncpp1=1.7.4-3.1 libk5crypto3=1.17-10 libkeyutils1=1.6.1-2 libkrb5-3=1.17-10 libkrb5support0=1.17-10 libldap-2.4-2=2.4.56+dfsg-1 libllvm11=1:11.0.0-5 liblsan0=10.2.0-16 liblz4-1=1.9.2-2 liblzma-dev=5.2.4-1+b1 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.38-5 libmagic1=1:5.38-5 libmd4c0=0.4.6-1 libmount1=2.36-3+b2 libmpc3=1.2.0-1 libmpfr6=4.1.0-3 libmtdev1=1.1.6-1 libncurses6=6.2+20200918-1 libncursesw6=6.2+20200918-1 libnettle8=3.6-2 libnghttp2-14=1.41.0-3 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libnss-nis=3.1-4 libnss-nisplus=1.3-4 libp11-kit0=0.23.21-2 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpciaccess0=0.16-1 libpcre2-16-0=10.34-7 libpcre2-8-0=10.34-7 libpcre3=2:8.39-13 libperl5.30=5.30.3-4 libpipeline1=1.5.3-1 libpng16-16=1.6.37-3 libprocps8=2:3.3.16-5 libpsl5=0.21.0-1.1 libpthread-stubs0-dev=0.4-1 libpwizlite-dev=3.0.3-1 libpwizlite3=3.0.3-1 libpython3-stdlib=3.8.6-1 libpython3.8-minimal=3.8.6-1 libpython3.8-stdlib=3.8.6-1 libqt5concurrent5=5.15.1+dfsg-2 libqt5core5a=5.15.1+dfsg-2 libqt5dbus5=5.15.1+dfsg-2 libqt5gui5=5.15.1+dfsg-2 libqt5network5=5.15.1+dfsg-2 libqt5printsupport5=5.15.1+dfsg-2 libqt5sql5=5.15.1+dfsg-2 libqt5test5=5.15.1+dfsg-2 libqt5widgets5=5.15.1+dfsg-2 libqt5xml5=5.15.1+dfsg-2 libquadmath0=10.2.0-16 libreadline8=8.1~rc2-2 librhash0=1.4.0-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.27+dfsg-2 libsasl2-modules-db=2.1.27+dfsg-2 libseccomp2=2.4.4-1+b1 libselinux1=3.1-2+b1 libsensors-config=1:3.6.0-2 libsensors5=1:3.6.0-2 libsigsegv2=2.12-2 libsm6=2:1.2.3-1 libsmartcols1=2.36-3+b2 libsqlite3-0=3.33.0-1 libssh2-1=1.8.0-2.1 libssl1.1=1.1.1h-1 libstdc++-10-dev=10.2.0-16 libstdc++6=10.2.0-16 libsub-override-perl=0.09-2 libsystemd0=246.6-2 libtasn1-6=4.16.0-2 libtinfo6=6.2+20200918-1 libtirpc-common=1.2.6-3 libtirpc-dev=1.2.6-3 libtirpc3=1.2.6-3 libtool=2.4.6-14 libtsan0=10.2.0-16 libubsan1=10.2.0-16 libuchardet0=0.0.7-1 libudev1=246.6-2 libunistring2=0.9.10-4 libuuid1=2.36-3+b2 libuv1=1.40.0-1 libvulkan-dev=1.2.154.1-1 libvulkan1=1.2.154.1-1 libwacom-common=1.5-1 libwacom2=1.5-1 libwayland-client0=1.18.0-2~exp1.1 libwayland-server0=1.18.0-2~exp1.1 libx11-6=2:1.6.12-1 libx11-data=2:1.6.12-1 libx11-dev=2:1.6.12-1 libx11-xcb1=2:1.6.12-1 libxau-dev=1:1.0.8-1+b2 libxau6=1:1.0.8-1+b2 libxcb-dri2-0=1.14-2 libxcb-dri3-0=1.14-2 libxcb-glx0=1.14-2 libxcb-icccm4=0.4.1-1.1 libxcb-image0=0.4.0-1+b2 libxcb-keysyms1=0.4.0-1+b2 libxcb-present0=1.14-2 libxcb-randr0=1.14-2 libxcb-render-util0=0.3.9-1+b1 libxcb-render0=1.14-2 libxcb-shape0=1.14-2 libxcb-shm0=1.14-2 libxcb-sync1=1.14-2 libxcb-util0=0.3.8-3+b2 libxcb-xfixes0=1.14-2 libxcb-xinerama0=1.14-2 libxcb-xinput0=1.14-2 libxcb-xkb1=1.14-2 libxcb1=1.14-2 libxcb1-dev=1.14-2 libxdamage1=1:1.1.5-2 libxdmcp-dev=1:1.1.2-3 libxdmcp6=1:1.1.2-3 libxerces-c-dev=3.2.3+debian-1+b1 libxerces-c3.2=3.2.3+debian-1+b1 libxext-dev=2:1.3.3-1+b2 libxext6=2:1.3.3-1+b2 libxfixes3=1:5.0.3-2 libxkbcommon-x11-0=1.0.1-1 libxkbcommon0=1.0.1-1 libxml2=2.9.10+dfsg-6.2 libxshmfence1=1.3-1 libxxf86vm1=1:1.1.4-1+b2 libz3-4=4.8.9-1 libzstd1=1.4.5+dfsg-4 linux-libc-dev=5.9.1-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 mime-support=3.64 ncurses-base=6.2+20200918-1 ncurses-bin=6.2+20200918-1 node-jquery=3.5.1+dfsg+~3.5.4-1 patch=2.7.6-6 perl=5.30.3-4 perl-base=5.30.3-4 perl-modules-5.30=5.30.3-4 pkg-config=0.29.2-1 po-debconf=1.0.21 procps=2:3.3.16-5 python3=3.8.6-1 python3-docutils=0.16+dfsg-3 python3-minimal=3.8.6-1 python3-roman=2.0.0-5 python3.8=3.8.6-1 python3.8-minimal=3.8.6-1 qt5-qmake=5.15.1+dfsg-2 qt5-qmake-bin=5.15.1+dfsg-2 qtbase5-dev=5.15.1+dfsg-2 qtbase5-dev-tools=5.15.1+dfsg-2 qtchooser=66-2 readline-common=8.1~rc2-2 sed=4.7-1 sensible-utils=0.0.12+nmu1 sgml-base=1.30 shared-mime-info=2.0-1 sysvinit-utils=2.96-5 tar=1.30+dfsg-7 ucf=3.0043 util-linux=2.36-3+b2 x11-common=1:7.7+21 x11proto-core-dev=2020.1-1 x11proto-dev=2020.1-1 x11proto-xext-dev=2020.1-1 xkb-data=2.29-2 xml-core=0.18+nmu1 xorg-sgml-doctools=1:1.11-1 xtrans-dev=1.4.0-1 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201122T153016Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20201108T155128Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d toppic=1.3.0+dfsg1-4 && mkdir -p /build/toppic-zz6kFN && dpkg-source --no-check -x /*.dsc /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 && chown -R builduser:builduser /build/toppic-zz6kFN" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1605116207" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/toppic-zz6kFN /tmp/toppic-1.3.0+dfsg1-47iu4qd5x bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20201108T155128Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.0_XSBaliib as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.0_XSBaliib Reading package lists... Building dependency tree... util-linux is already the newest version (2.36-3+b2). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20201108T155128Z unstable/main amd64 libfakeroot amd64 1.25.3-1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20201108T155128Z unstable/main amd64 fakeroot amd64 1.25.3-1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (1031 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4664 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1_amd64.deb ... Unpacking fakeroot (1.25.3-1) ... Setting up libfakeroot:amd64 (1.25.3-1) ... Setting up fakeroot (1.25.3-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-4) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201122T153016Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20201108T155128Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.0_XSBaliib Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Get:2 http://snapshot.notset.fr/archive/debian/20201122T153016Z unstable InRelease [146 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20201108T155128Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20201122T153016Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20201122T153016Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20201122T153016Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20201122T153016Z unstable/main amd64 Packages [11.6 MB] Fetched 34.3 MB in 33s (1040 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.0_XSBaliib I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d toppic=1.3.0+dfsg1-4 && mkdir -p /build/toppic-zz6kFN && dpkg-source --no-check -x /*.dsc /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 && chown -R builduser:builduser /build/toppic-zz6kFN"' exec /tmp/mmdebstrap.0_XSBaliib Reading package lists... NOTICE: 'toppic' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/toppic.git Please use: git clone https://salsa.debian.org/debichem-team/toppic.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 11.1 MB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main toppic 1.3.0+dfsg1-4 (dsc) [2459 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main toppic 1.3.0+dfsg1-4 (tar) [11.0 MB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main toppic 1.3.0+dfsg1-4 (diff) [136 kB] Fetched 11.1 MB in 9s (1250 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'toppic_1.3.0+dfsg1-4.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting toppic in /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 dpkg-source: info: unpacking toppic_1.3.0+dfsg1.orig.tar.xz dpkg-source: info: unpacking toppic_1.3.0+dfsg1-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-Fix-download-of-JavaScript-related-problems.patch dpkg-source: info: applying 0002-Use-the-CMake-build-system-to-configure-the-DATADIR-.patch dpkg-source: info: applying 0004-Fix-the-erroneous-bin-install-directory.patch dpkg-source: info: applying 0004-Ensure-the-GUI-variants-are-installed-and-shipped.patch dpkg-source: info: applying 0005-Patch-to-use-libpwizlite-and-libhts-from-the-system.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1605116207" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.0_XSBaliib dpkg-buildpackage: info: source package toppic dpkg-buildpackage: info: source version 1.3.0+dfsg1-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Filippo Rusconi dpkg-source --before-build . fakeroot debian/rules clean dh clean --buildsystem=cmake debian/rules override_dh_auto_clean make[1]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1' rm -f debian/topfd.1 rm -f debian/toppic.1 rm -f debian/topmg.1 rm -f debian/topdiff.1 dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/toppic.substvars debian/toppic-common.substvars debian/files rm -fr -- debian/toppic/ debian/tmp/ debian/toppic-common/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) make[1]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/toppic.substvars debian/toppic-common.substvars debian/files rm -fr -- debian/toppic/ debian/tmp/ debian/toppic-common/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-indep dh build-indep --buildsystem=cmake dh_update_autotools_config -i -O--buildsystem=cmake dh_autoreconf -i -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1' rst2man debian/topfd.1.rst > debian/topfd.1 rst2man debian/toppic.1.rst > debian/toppic.1 rst2man debian/topmg.1.rst > debian/topmg.1 rst2man debian/topdiff.1.rst > debian/topdiff.1 dh_auto_configure -- \ -DCMAKE_INSTALL_PREFIX="/usr" \ -DCMAKE_BUILD_TYPE=release install -d obj-x86_64-linux-gnu cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=release .. -- The C compiler identification is GNU 10.2.0 -- The CXX compiler identification is GNU 10.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- system name Linux -- PwizLite_INCLUDE_DIRS: /usr/include/pwizlite -- PwizLite_LIBRARIES: /usr/lib/x86_64-linux-gnu/libpwizlite.so.3.0.3 -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2") -- Checking for one of the modules 'htslib;libhts' -- HtsLib_INCLUDE_DIRS: -- HtsLib_LIBRARY: -- cmake cxx flags -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1' dh_auto_build -i -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -B/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topfd_autogen.dir/build.make CMakeFiles/topfd_autogen.dir/depend make -f CMakeFiles/topdiff_autogen.dir/build.make CMakeFiles/topdiff_autogen.dir/depend make -f CMakeFiles/topfd_gui_autogen.dir/build.make CMakeFiles/topfd_gui_autogen.dir/depend make -f CMakeFiles/toppic_autogen.dir/build.make CMakeFiles/toppic_autogen.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topfd_autogen.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topdiff_autogen.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/toppic_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target toppic_autogen make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/toppic_autogen.dir/build.make CMakeFiles/toppic_autogen.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' Scanning dependencies of target topfd_gui_autogen make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topfd_gui_autogen.dir/build.make CMakeFiles/topfd_gui_autogen.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 0%] Automatic MOC and UIC for target toppic Scanning dependencies of target topfd_autogen /usr/bin/cmake -E cmake_autogen /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/toppic_autogen.dir/AutogenInfo.json release make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topfd_autogen.dir/build.make CMakeFiles/topfd_autogen.dir/build Scanning dependencies of target topdiff_autogen [ 0%] Automatic MOC and UIC for target topfd_gui /usr/bin/cmake -E cmake_autogen /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/AutogenInfo.json release make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topdiff_autogen.dir/build.make CMakeFiles/topdiff_autogen.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 0%] Automatic MOC and UIC for target topfd [ 0%] Automatic MOC and UIC for target topdiff /usr/bin/cmake -E cmake_autogen /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topfd_autogen.dir/AutogenInfo.json release /usr/bin/cmake -E cmake_autogen /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topdiff_autogen.dir/AutogenInfo.json release make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 0%] Built target toppic_autogen make -f CMakeFiles/toppic_gui_autogen.dir/build.make CMakeFiles/toppic_gui_autogen.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/toppic_gui_autogen.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 0%] Built target topfd_autogen make -f CMakeFiles/topmg_autogen.dir/build.make CMakeFiles/topmg_autogen.dir/depend Scanning dependencies of target toppic_gui_autogen make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topmg_autogen.dir/DependInfo.cmake --color= make -f CMakeFiles/toppic_gui_autogen.dir/build.make CMakeFiles/toppic_gui_autogen.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' Scanning dependencies of target topmg_autogen make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topmg_autogen.dir/build.make CMakeFiles/topmg_autogen.dir/build [ 1%] Automatic MOC and UIC for target toppic_gui make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_autogen /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/toppic_gui_autogen.dir/AutogenInfo.json release [ 1%] Built target topdiff_autogen make -f CMakeFiles/topdiff_gui_autogen.dir/build.make CMakeFiles/topdiff_gui_autogen.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/DependInfo.cmake --color= [ 1%] Automatic MOC and UIC for target topmg Scanning dependencies of target topdiff_gui_autogen /usr/bin/cmake -E cmake_autogen /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topmg_autogen.dir/AutogenInfo.json release make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topdiff_gui_autogen.dir/build.make CMakeFiles/topdiff_gui_autogen.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Automatic MOC and UIC for target topdiff_gui /usr/bin/cmake -E cmake_autogen /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/AutogenInfo.json release make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Built target topmg_autogen make -f CMakeFiles/topmg_gui_autogen.dir/build.make CMakeFiles/topmg_gui_autogen.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target topmg_gui_autogen make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topmg_gui_autogen.dir/build.make CMakeFiles/topmg_gui_autogen.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Automatic MOC and UIC for target topmg_gui /usr/bin/cmake -E cmake_autogen /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/AutogenInfo.json release make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Built target topfd_gui_autogen make -f CMakeFiles/topfd.dir/build.make CMakeFiles/topfd.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topfd.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Built target topdiff_gui_autogen make -f CMakeFiles/topdiff.dir/build.make CMakeFiles/topdiff.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topdiff.dir/DependInfo.cmake --color= Scanning dependencies of target topfd make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topfd.dir/build.make CMakeFiles/topfd.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Building CXX object CMakeFiles/topfd.dir/topfd_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topfd_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/topfd_autogen/mocs_compilation.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topfd_autogen/mocs_compilation.cpp [ 1%] Building CXX object CMakeFiles/topfd.dir/src/console/topfd.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topfd_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/console/topfd.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/console/topfd.cpp Scanning dependencies of target topdiff make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topdiff.dir/build.make CMakeFiles/topdiff.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Building CXX object CMakeFiles/topdiff.dir/topdiff_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/topdiff_autogen/mocs_compilation.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_autogen/mocs_compilation.cpp [ 1%] Building CXX object CMakeFiles/topdiff.dir/src/console/topdiff.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/console/topdiff.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/console/topdiff.cpp make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Built target toppic_gui_autogen make -f CMakeFiles/topfd_gui.dir/build.make CMakeFiles/topfd_gui.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 2%] Automatic RCC for src/gui/topfd/icon.qrc /usr/bin/cmake -E cmake_autorcc /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topfd_gui_autogen.dir/AutoRcc_icon_HZKSH7CGSX_Info.json release cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topfd_gui.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 2%] Built target topmg_gui_autogen [ 2%] Building CXX object CMakeFiles/topdiff.dir/src/console/topdiff_argument.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/console/topdiff_argument.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/console/topdiff_argument.cpp Scanning dependencies of target topfd_gui make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topfd_gui.dir/build.make CMakeFiles/topfd_gui.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 2%] Building CXX object CMakeFiles/topfd_gui.dir/topfd_gui_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topfd_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/topfd_gui_autogen/mocs_compilation.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topfd_gui_autogen/mocs_compilation.cpp [ 2%] Building CXX object CMakeFiles/topfd.dir/src/console/topfd_argument.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topfd_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/console/topfd_argument.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/console/topfd_argument.cpp make -f CMakeFiles/toppic.dir/build.make CMakeFiles/toppic.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/toppic.dir/DependInfo.cmake --color= Scanning dependencies of target toppic make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/toppic.dir/build.make CMakeFiles/toppic.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 2%] Building CXX object CMakeFiles/toppic.dir/toppic_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/toppic_autogen/mocs_compilation.cpp.o -c 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/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp [ 10%] Building CXX object CMakeFiles/topdiff.dir/src/seq/fasta_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff.dir/src/seq/fasta_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ [ 10%] Building CXX object 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CMakeFiles/toppic.dir/src/common/xml/xml_dom_parser.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/common/xml/xml_dom_parser.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_parser.cpp [ 10%] Building CXX object CMakeFiles/topfd.dir/src/ms/spec/base_peak_type.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topfd_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/spec/base_peak_type.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/base_peak_type.cpp [ 10%] Building CXX object 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-I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topfd_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/msalign_frac_merge.cpp /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ [ 14%] Building CXX object CMakeFiles/toppic.dir/src/seq/local_anno.cpp.o [ 14%] Building CXX object CMakeFiles/topfd_gui.dir/src/ms/spec/msalign_reader.cpp.o /usr/bin/c++ 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CMakeFiles/topdiff.dir/src/ms/feature/frac_feature_cluster.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_cluster.cpp [ 26%] Building CXX object CMakeFiles/topfd.dir/src/ms/feature/savitzky_golay.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topfd_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topfd.dir/src/ms/feature/savitzky_golay.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/feature/savitzky_golay.cpp [ 26%] Building CXX object CMakeFiles/toppic.dir/src/ms/env/match_env_filter.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o 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/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/toppic_gui.dir/DependInfo.cmake --color= Scanning dependencies of target toppic_gui make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/toppic_gui.dir/build.make CMakeFiles/toppic_gui.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 36%] Building CXX object CMakeFiles/toppic_gui.dir/toppic_gui_autogen/mocs_compilation.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 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/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/gui/toppic/toppic_gui.cpp: In function ‘int main(int, char**)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/gui/toppic/toppic_gui.cpp:36:44: warning: ‘const QRect QDesktopWidget::availableGeometry(int) const’ is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 36 | QRect deskRect = desk->availableGeometry(); | ^ In file included from /usr/include/x86_64-linux-gnu/qt5/QtWidgets/QDesktopWidget:1, from /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/gui/toppic/toppic_gui.cpp:18: /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdesktopwidget.h:88:67: note: declared here 88 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect availableGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~~~~ [ 37%] Building CXX object CMakeFiles/toppic_gui.dir/src/gui/toppic/toppicwindow.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 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CMakeFiles/topdiff.dir/src/prsm/prsm_simple_cluster.cpp.o CMakeFiles/topdiff.dir/src/prsm/prsm_stat.cpp.o CMakeFiles/topdiff.dir/src/prsm/prsm_str.cpp.o CMakeFiles/topdiff.dir/src/prsm/prsm_str_merge.cpp.o CMakeFiles/topdiff.dir/src/prsm/prsm_table_writer.cpp.o CMakeFiles/topdiff.dir/src/prsm/prsm_top_selector.cpp.o CMakeFiles/topdiff.dir/src/prsm/prsm_util.cpp.o CMakeFiles/topdiff.dir/src/prsm/prsm_xml_writer.cpp.o CMakeFiles/topdiff.dir/src/prsm/prsm_xml_writer_set.cpp.o CMakeFiles/topdiff.dir/src/prsm/prsm_xml_writer_util.cpp.o CMakeFiles/topdiff.dir/src/prsm/simple_prsm.cpp.o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_reader.cpp.o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_str.cpp.o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_str_merge.cpp.o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_table_writer.cpp.o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_util.cpp.o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_xml_writer.cpp.o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o CMakeFiles/topdiff.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o CMakeFiles/topdiff.dir/src/prsm/theo_peak_util.cpp.o CMakeFiles/topdiff.dir/src/merge/feature_prsm.cpp.o CMakeFiles/topdiff.dir/src/merge/feature_prsm_reader.cpp.o CMakeFiles/topdiff.dir/src/merge/feature_sample_merge.cpp.o -o ../bin/topdiff -lxerces-c -lboost_program_options -lboost_filesystem -lboost_system -lboost_thread -lpthread -lz -lhts [ 46%] Building CXX object CMakeFiles/topmg.dir/src/seq/db_block.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui 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/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topdiff_gui.dir/DependInfo.cmake --color= [ 46%] Building CXX object CMakeFiles/topmg.dir/src/seq/fasta_index_reader.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore 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-I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/topdiff_gui_autogen/mocs_compilation.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/mocs_compilation.cpp [ 46%] Building CXX object CMakeFiles/toppic.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/prsm/simple_prsm_xml_writer_set.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_set.cpp [ 46%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/util/logger.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu 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-I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_parser.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_parser.cpp /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/gui/topdiff/topdiff_gui.cpp: In function ‘int main(int, char**)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/gui/topdiff/topdiff_gui.cpp:40:44: warning: ‘const QRect QDesktopWidget::availableGeometry(int) const’ is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 40 | QRect deskRect = desk->availableGeometry(); | ^ In file included from /usr/include/x86_64-linux-gnu/qt5/QtWidgets/QDesktopWidget:1, from /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/gui/topdiff/topdiff_gui.cpp:19: /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdesktopwidget.h:88:67: note: declared here 88 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect availableGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/topmg.dir/src/seq/fasta_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/fasta_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/xml/xml_dom_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/common/xml/xml_dom_util.cpp [ 47%] Building CXX object CMakeFiles/topdiff_gui.dir/src/gui/topdiff/topdiffdialog.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/gui/topdiff/topdiffdialog.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/gui/topdiff/topdiffdialog.cpp [ 47%] Building CXX object CMakeFiles/toppic.dir/src/filter/diag/diag_filter_mng.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/diag/diag_filter_mng.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_mng.cpp /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ [ 47%] Building CXX object CMakeFiles/toppic.dir/src/filter/diag/diag_filter_processor.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/diag/diag_filter_processor.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/filter/diag/diag_filter_processor.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/common/xml/xml_writer.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/common/xml/xml_writer.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/common/xml/xml_writer.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/alter.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/alter.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/alter.cpp [ 47%] Building CXX object CMakeFiles/topmg.dir/src/seq/local_anno.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/local_anno.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/local_anno.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/alter_type.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/alter_type.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/alter_type.cpp [ 47%] Building CXX object CMakeFiles/topmg.dir/src/seq/mass_shift.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/mass_shift.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/bp_spec.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/bp_spec.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/bp_spec.cpp [ 47%] Building CXX object CMakeFiles/topmg.dir/src/seq/proteoform.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/proteoform.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/proteoform.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/break_point.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/break_point.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/break_point.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/db_block.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/db_block.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/db_block.cpp [ 47%] Building CXX object CMakeFiles/topdiff_gui.dir/src/console/topdiff_argument.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/console/topdiff_argument.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/console/topdiff_argument.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_index_reader.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_index_reader.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_index_reader.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_reader.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_reader.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_reader.cpp [ 47%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_seq.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_seq.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_seq.cpp [ 47%] Building CXX object CMakeFiles/toppic.dir/src/filter/diag/mass_diag_filter.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/diag/mass_diag_filter.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/filter/diag/mass_diag_filter.cpp [ 48%] Building CXX object CMakeFiles/topmg.dir/src/seq/proteoform_factory.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/seq/proteoform_factory.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/proteoform_factory.cpp [ 49%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_sub_seq.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_sub_seq.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.cpp [ 49%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_sub_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_sub_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp [ 49%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/fasta_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/fasta_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp [ 49%] Building CXX object CMakeFiles/toppic.dir/src/filter/massmatch/filter_protein.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/massmatch/filter_protein.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/filter/massmatch/filter_protein.cpp /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object CMakeFiles/toppic.dir/src/filter/massmatch/mass_match.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/filter/massmatch/mass_match.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/filter/massmatch/mass_match.cpp [ 50%] Building CXX object CMakeFiles/topdiff_gui.dir/src/console/topdiff_process.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/console/topdiff_process.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/console/topdiff_process.cpp [ 50%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/local_anno.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/seq/local_anno.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/local_anno.cpp [ 50%] Building CXX object CMakeFiles/toppic.dir/src/filter/massmatch/mass_match_factory.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat 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CMakeFiles/topmg.dir/src/ms/spec/env_peak.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/env_peak.cpp [ 51%] Building CXX object CMakeFiles/toppic_gui.dir/src/seq/proteoform_type.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o 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CMakeFiles/topdiff_gui.dir/src/common/base/prot_mod.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/common/base/prot_mod.cpp [ 52%] Building CXX object CMakeFiles/toppic.dir/src/filter/zeroptm/mass_zero_ptm_filter.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o 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-fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/deconv_ms_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms_util.cpp [ 53%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/ptm_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC 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-O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/deconv_peak.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.cpp [ 54%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/env_peak.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o 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-O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/zeroptmsearch/zero_ptm_fast_match.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_fast_match.cpp [ 54%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/support_peak_type_base.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/support_peak_type_base.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/common/base/support_peak_type_base.cpp [ 54%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/ms_header.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/ms_header.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/ms_header.cpp [ 54%] Building CXX object CMakeFiles/topmg.dir/src/ms/spec/peak.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC 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CMakeFiles/topmg.dir/src/ms/spec/prm_ms.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/prm_ms.cpp [ 54%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/msalign_frac_merge.cpp [ 54%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/trunc_base.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/common/base/trunc_base.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/common/base/trunc_base.cpp [ 54%] Building CXX object CMakeFiles/toppic.dir/src/search/zeroptmsearch/zero_ptm_search_processor.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/zeroptmsearch/zero_ptm_search_processor.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/zeroptmsearch/zero_ptm_search_processor.cpp [ 54%] Building CXX object CMakeFiles/topdiff_gui.dir/src/common/base/trunc_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 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CMakeFiles/toppic_gui.dir/src/ms/spec/prm_peak_factory.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/prm_peak_factory.cpp [ 58%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/alter_type.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/alter_type.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/alter_type.cpp [ 58%] Building CXX object CMakeFiles/toppic.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header_util.cpp [ 58%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/raw_ms_group.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/spec/raw_ms_group.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_group.cpp [ 58%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/env_filter.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG 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CMakeFiles/toppic_gui.dir/src/ms/spec/raw_ms_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_util.cpp [ 58%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/bp_spec.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o 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CMakeFiles/toppic.dir/src/search/oneptmsearch/dp_pair.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/oneptmsearch/dp_pair.cpp [ 58%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/env_para.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o 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CMakeFiles/topmg.dir/src/ms/env/env_peak_pair.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/env/env_peak_pair.cpp [ 58%] Building CXX object CMakeFiles/toppic.dir/src/search/oneptmsearch/one_ptm_search_processor.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/one_ptm_search_processor.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/oneptmsearch/one_ptm_search_processor.cpp [ 58%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/sp_para.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC 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-o CMakeFiles/topdiff_gui.dir/src/seq/break_point.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/break_point.cpp [ 59%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/env_rescore.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/env_rescore.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/env/env_rescore.cpp [ 59%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/db_block.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/db_block.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/db_block.cpp [ 59%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/spec/spectrum_set.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o 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CMakeFiles/topmg.dir/src/ms/env/match_env_filter.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/env/match_env_filter.cpp [ 60%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/fasta_sub_seq.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/fasta_sub_seq.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_sub_seq.cpp [ 60%] Building CXX object CMakeFiles/toppic_gui.dir/src/ms/env/env_base.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/env/env_base.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/env/env_base.cpp [ 60%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/fasta_sub_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/fasta_sub_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp [ 60%] Building CXX object CMakeFiles/toppic.dir/src/search/oneptmsearch/one_ptm_slow_match.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/one_ptm_slow_match.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/oneptmsearch/one_ptm_slow_match.cpp [ 60%] Building CXX object CMakeFiles/topmg.dir/src/ms/env/match_env_refine.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/match_env_refine.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/env/match_env_refine.cpp [ 60%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/fasta_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/fasta_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ [ 60%] Building CXX object 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CMakeFiles/topmg.dir/src/ms/env/match_env_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/env/match_env_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/env/match_env_util.cpp [ 60%] Building CXX object CMakeFiles/topdiff_gui.dir/src/seq/local_anno.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/seq/local_anno.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/local_anno.cpp [ 61%] Building CXX object 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CMakeFiles/toppic.dir/src/search/oneptmsearch/ps_align.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/search/oneptmsearch/ps_align.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/oneptmsearch/ps_align.cpp [ 61%] Building CXX object 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-fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/peak_cluster_score.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/feature/peak_cluster_score.cpp [ 63%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/env_peak.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC 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-DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/ms/feature/frac_feature_writer.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/feature/frac_feature_writer.cpp [ 63%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/extend_ms.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/extend_ms.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms.cpp [ 63%] Building CXX object CMakeFiles/toppic.dir/src/stat/tdgf/comp_prob_value.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic.dir/src/stat/tdgf/comp_prob_value.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/stat/tdgf/comp_prob_value.cpp [ 64%] Building CXX object CMakeFiles/topmg.dir/src/ms/feature/sample_feature.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/ms/feature/sample_feature.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature.cpp [ 64%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/extend_ms_factory.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o 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/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/feature/single_charge_feature.cpp [ 66%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/prm_ms_factory.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/prm_ms_factory.cpp.o 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CMakeFiles/toppic_gui.dir/src/prsm/peak_ion_pair.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/prsm/peak_ion_pair.cpp [ 68%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/spec/raw_ms_group.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/spec/raw_ms_group.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/raw_ms_group.cpp [ 68%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_coverage.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o 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CMakeFiles/topdiff_gui.dir/src/ms/env/envelope.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/env/envelope.cpp [ 69%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_form_filter.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o 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CMakeFiles/toppic.dir/src/search/ptmsearch/comp_shift_low_mem.cpp.o CMakeFiles/toppic.dir/src/search/ptmsearch/ptm_search_processor.cpp.o CMakeFiles/toppic.dir/src/search/ptmsearch/ptm_search_slow_filter.cpp.o CMakeFiles/toppic.dir/src/search/ptmsearch/ptm_slow_match.cpp.o CMakeFiles/toppic.dir/src/stat/tdgf/comp_prob_value.cpp.o CMakeFiles/toppic.dir/src/stat/tdgf/comp_pvalue_array.cpp.o CMakeFiles/toppic.dir/src/stat/tdgf/comp_pvalue_lookup_table.cpp.o CMakeFiles/toppic.dir/src/stat/tdgf/count_test_num.cpp.o CMakeFiles/toppic.dir/src/stat/tdgf/evalue_processor.cpp.o CMakeFiles/toppic.dir/src/stat/tdgf/tdgf_util.cpp.o CMakeFiles/toppic.dir/src/stat/local/local_processor.cpp.o CMakeFiles/toppic.dir/src/stat/local/local_util.cpp.o CMakeFiles/toppic.dir/src/visual/anno_cleavage.cpp.o CMakeFiles/toppic.dir/src/visual/anno_file_list.cpp.o CMakeFiles/toppic.dir/src/visual/anno_mass_shift.cpp.o CMakeFiles/toppic.dir/src/visual/anno_proteoform.cpp.o CMakeFiles/toppic.dir/src/visual/anno_prsm.cpp.o CMakeFiles/toppic.dir/src/visual/anno_ptm.cpp.o CMakeFiles/toppic.dir/src/visual/anno_ptm_position.cpp.o CMakeFiles/toppic.dir/src/visual/anno_residue.cpp.o CMakeFiles/toppic.dir/src/visual/anno_xml_util.cpp.o CMakeFiles/toppic.dir/src/visual/json_transformer.cpp.o CMakeFiles/toppic.dir/src/visual/xml_generator.cpp.o -o ../bin/toppic -lxerces-c -lboost_program_options -lboost_filesystem -lboost_system -lboost_thread -lpthread -lz -lhts [ 73%] Building CXX object CMakeFiles/topmg.dir/src/prsm/prsm_table_writer.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/prsm/prsm_table_writer.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/prsm/prsm_table_writer.cpp [ 73%] Building CXX object CMakeFiles/topdiff_gui.dir/src/ms/feature/sample_feature.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/ms/feature/sample_feature.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/feature/sample_feature.cpp make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 73%] Built target toppic make -f CMakeFiles/topmg_gui.dir/build.make CMakeFiles/topmg_gui.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 73%] Automatic RCC for src/gui/topmg/icon.qrc /usr/bin/cmake -E cmake_autorcc /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/AutoRcc_icon_OBJ2MOUSMQ_Info.json release cd 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/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/feature/spec_feature_writer.cpp [ 74%] Building CXX object CMakeFiles/toppic_gui.dir/src/prsm/prsm_table_writer.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/prsm/prsm_table_writer.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/prsm/prsm_table_writer.cpp [ 74%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/extreme_value.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/extreme_value.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/prsm/extreme_value.cpp /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/gui/topmg/topmg_gui.cpp: In function ‘int main(int, char**)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/gui/topmg/topmg_gui.cpp:36:44: warning: ‘const QRect QDesktopWidget::availableGeometry(int) const’ is deprecated: Use QGuiApplication::screens() [-Wdeprecated-declarations] 36 | QRect deskRect = desk->availableGeometry(); | ^ In file included from /usr/include/x86_64-linux-gnu/qt5/QtWidgets/QDesktopWidget:1, from /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/gui/topmg/topmg_gui.cpp:18: /usr/include/x86_64-linux-gnu/qt5/QtWidgets/qdesktopwidget.h:88:67: note: declared here 88 | QT_DEPRECATED_X("Use QGuiApplication::screens()") const QRect availableGeometry(int screen = -1) const; | ^~~~~~~~~~~~~~~~~ [ 74%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/mass_shift_str.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu 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CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/diagonal.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal.cpp [ 84%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/fasta_sub_seq.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o 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CMakeFiles/topmg_gui.dir/src/seq/fasta_sub_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_sub_util.cpp [ 84%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/simple_prsm_xml_writer_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/prsm/simple_prsm_xml_writer_util.cpp [ 84%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/fasta_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/fasta_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp [ 84%] Building CXX object CMakeFiles/topdiff_gui.dir/src/prsm/theo_peak_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/prsm/theo_peak_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/prsm/theo_peak_util.cpp /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbSimplePreprocess(const string&, const string&)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:138:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 138 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp: In function ‘void toppic::fasta_util::dbPreprocess(const string&, const string&, bool, int)’: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/fasta_util.cpp:154:12: warning: ignoring return value of ‘int fai_build(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 154 | fai_build(db_file_name.c_str()); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/diagonal_header.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/diagonal_header.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header.cpp [ 84%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/local_anno.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/local_anno.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/local_anno.cpp [ 84%] Building CXX object CMakeFiles/topmg.dir/src/search/graph/proteo_graph_reader.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graph/proteo_graph_reader.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/graph/proteo_graph_reader.cpp [ 84%] Building CXX object CMakeFiles/topdiff_gui.dir/src/merge/feature_prsm.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/merge/feature_prsm.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/merge/feature_prsm.cpp [ 84%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/mass_shift.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/seq/mass_shift.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/seq/mass_shift.cpp [ 84%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/oneptmsearch/diagonal_header_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/oneptmsearch/diagonal_header_util.cpp [ 84%] Building CXX object CMakeFiles/topdiff_gui.dir/src/merge/feature_prsm_reader.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topdiff_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topdiff_gui.dir/src/merge/feature_prsm_reader.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/merge/feature_prsm_reader.cpp [ 84%] Building CXX object CMakeFiles/topmg_gui.dir/src/seq/proteoform.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC 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CMakeFiles/topmg.dir/src/search/graph/spec_graph_reader.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/graph/spec_graph_reader.cpp make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 86%] Built target topdiff_gui [ 86%] Building CXX object CMakeFiles/topmg.dir/src/search/graphalign/graph_align.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat 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-fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/deconv_json_merge.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/deconv_json_merge.cpp [ 87%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/ptmsearch/ptm_search_processor.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/ptmsearch/ptm_search_processor.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/ptmsearch/ptm_search_processor.cpp [ 87%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/deconv_ms_util.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/deconv_ms_util.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/deconv_ms_util.cpp [ 87%] Building CXX object CMakeFiles/topmg.dir/src/search/graphalign/graph_dp_node.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg.dir/src/search/graphalign/graph_dp_node.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/graphalign/graph_dp_node.cpp [ 87%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/deconv_peak.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/deconv_peak.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/deconv_peak.cpp [ 88%] Building CXX object CMakeFiles/topmg.dir/src/search/graphalign/graph_post_processor.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore 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-I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/extend_ms_factory.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/extend_ms_factory.cpp [ 88%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/extend_peak.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui 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-I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/toppic_gui.dir/src/search/ptmsearch/ptm_search_slow_filter.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/search/ptmsearch/ptm_search_slow_filter.cpp [ 88%] Building CXX object CMakeFiles/topmg_gui.dir/src/ms/spec/ms_header.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/topmg_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets 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-I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/pwizlite -g -O2 -fdebug-prefix-map=/build/toppic-zz6kFN/toppic-1.3.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -std=c++11 -O3 -DWITHOUT_MZ5 -fPIC -DTOPPIC_LINUX -O3 -DNDEBUG -o CMakeFiles/topmg_gui.dir/src/ms/spec/msalign_frac_merge.cpp.o -c /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src/ms/spec/msalign_frac_merge.cpp [ 88%] Building CXX object CMakeFiles/toppic_gui.dir/src/search/ptmsearch/ptm_slow_match.cpp.o /usr/bin/c++ -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1 -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/toppic_gui_autogen/include -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/src -I/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/ext -I/usr/include/x86_64-linux-gnu/qt5 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CMakeFiles/topmg_autogen.dir/build.make CMakeFiles/topmg_autogen.dir/build make -f CMakeFiles/topmg_gui_autogen.dir/build.make CMakeFiles/topmg_gui_autogen.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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'/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Automatic MOC and UIC for target topdiff_gui [ 1%] Automatic MOC and UIC for target topmg_gui /usr/bin/cmake -E cmake_autogen /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topmg_gui_autogen.dir/AutogenInfo.json release /usr/bin/cmake -E cmake_autogen /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topdiff_gui_autogen.dir/AutogenInfo.json release make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Built target topmg_autogen make -f CMakeFiles/topfd.dir/build.make CMakeFiles/topfd.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topfd.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Built target topdiff_gui_autogen make -f CMakeFiles/topdiff.dir/build.make CMakeFiles/topdiff.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topdiff.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topfd.dir/build.make CMakeFiles/topfd.dir/build make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 1%] Built target toppic_gui_autogen make -f CMakeFiles/topfd_gui.dir/build.make CMakeFiles/topfd_gui.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topfd.dir/build'. make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topfd_gui.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topdiff.dir/build.make CMakeFiles/topdiff.dir/build [ 9%] Built target topfd make -f CMakeFiles/toppic.dir/build.make CMakeFiles/toppic.dir/depend make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/toppic.dir/DependInfo.cmake --color= [ 9%] Built target topmg_gui_autogen make -f CMakeFiles/toppic_gui.dir/build.make CMakeFiles/toppic_gui.dir/depend make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/toppic_gui.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topdiff.dir/build'. make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topfd_gui.dir/build.make CMakeFiles/topfd_gui.dir/build [ 20%] Built target topdiff make -f CMakeFiles/topmg.dir/build.make CMakeFiles/topmg.dir/depend make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/toppic.dir/build.make CMakeFiles/toppic.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topmg.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topfd_gui.dir/build'. make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 29%] Built target topfd_gui make -f CMakeFiles/topdiff_gui.dir/build.make CMakeFiles/topdiff_gui.dir/depend make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/toppic_gui.dir/build.make CMakeFiles/toppic_gui.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topdiff_gui.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/toppic.dir/build'. make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 44%] Built target toppic make -f CMakeFiles/topmg_gui.dir/build.make CMakeFiles/topmg_gui.dir/depend make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topmg.dir/build.make CMakeFiles/topmg.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' cd /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1 /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles/topmg_gui.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/toppic_gui.dir/build'. make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topdiff_gui.dir/build.make CMakeFiles/topdiff_gui.dir/build make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topmg.dir/build'. make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [ 58%] Built target toppic_gui [ 73%] Built target topmg make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topdiff_gui.dir/build'. make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make -f CMakeFiles/topmg_gui.dir/build.make CMakeFiles/topmg_gui.dir/build [ 85%] Built target topdiff_gui make[3]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/topmg_gui.dir/build'. make[3]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' [100%] Built target topmg_gui make[2]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "release" -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/topfd -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/toppic -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/toppic_gui -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/topmg -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/topmg_gui -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/topdiff -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/bin/topdiff_gui -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/d3 -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/d3/d3.js -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/d3/d3.min.js -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/canvas-toBlob.js -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/bootstrap -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/download -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/download/saveImage.js -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/lib/jquery.dataTables.js -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/invokespectrum.js -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/spectrumgraph.js -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/spectrumparameters.js -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/images -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/images/download.png -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/images/svg.png -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/images/png.png -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/js/spectrum_graph/spectrumdownload.js -- 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/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images/info.png -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/images/png.png -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/topview/inspect/help.html -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/base_data -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/base_data/theo_patt.txt -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/base_data/unimod_ptm.xml -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/base_data/mass_table.txt -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/base_data/env_rescore_para.txt -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/SummedCorrScore.tsv -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/IntScore.tsv -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/DistScore.tsv -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/XicCorrScore2.tsv -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/XicCorrScore1.tsv -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/CorrScore.tsv -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/SummedIntScore.tsv -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/SummedDistScore.tsv -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/promex/AbuScore.tsv -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm15_ptm0.txt -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm10_ptm2.txt -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm5_ptm0.txt -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm10_ptm0.txt -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm10_ptm1.txt -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm5_ptm1.txt -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm15_ptm1.txt -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm5_ptm2.txt -- Installing: /build/toppic-zz6kFN/toppic-1.3.0+dfsg1/debian/tmp/usr/share/toppic/p_value_table/ppm15_ptm2.txt make[1]: Leaving directory '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1/obj-x86_64-linux-gnu' dh_install -i -O--buildsystem=cmake install -d debian/.debhelper/generated/toppic install -d debian/toppic-common//usr/share cp --reflink=auto -a debian/tmp/usr/share/toppic debian/toppic-common//usr/share/ install -d debian/toppic-common/usr/share/toppic/local-source-copies/ cp --reflink=auto -a ./debian/local-source-copies/datatables.min.css ./debian/local-source-copies/datatables.min.js debian/toppic-common/usr/share/toppic/local-source-copies// install -d debian/.debhelper/generated/toppic-common dh_installdocs -i -O--buildsystem=cmake install -d debian/toppic-common/usr/share/doc/toppic-common install -p -m0644 debian/copyright debian/toppic-common/usr/share/doc/toppic-common/copyright dh_installchangelogs -i -O--buildsystem=cmake install -p -m0644 debian/changelog debian/toppic-common/usr/share/doc/toppic-common/changelog.Debian dh_installman -i -O--buildsystem=cmake dh_installinit -i -O--buildsystem=cmake dh_installsystemduser -i -O--buildsystem=cmake dh_perl -i -O--buildsystem=cmake dh_link -i -O--buildsystem=cmake rm -f debian/toppic-common/usr/share/toppic/topview/visual/css/FreeMono.ttf ln -s ../../../../fonts/truetype/freefont/FreeMono.ttf debian/toppic-common/usr/share/toppic/topview/visual/css/FreeMono.ttf rm -f debian/toppic-common/usr/share/toppic/topview/js/lib/popper.min.js ln -s ../../../../nodejs/popper.js/dist/popper.min.js debian/toppic-common/usr/share/toppic/topview/js/lib/popper.min.js rm -f debian/toppic-common/usr/share/toppic/topview/js/lib/jQuery_3_4.js ln -s ../../../../nodejs/jquery/dist/jquery.js debian/toppic-common/usr/share/toppic/topview/js/lib/jQuery_3_4.js rm -f debian/toppic-common/usr/share/toppic/topview/js/lib/jQuery-ui_1_11_4.min.js ln -s ../../../../javascript/jquery-ui/jquery-ui.min.js debian/toppic-common/usr/share/toppic/topview/js/lib/jQuery-ui_1_11_4.min.js rm -f debian/toppic-common/usr/share/toppic/topview/visual/js/prsm/FileSaver.js ln -s ../../../../../javascript/filesaver/FileSaver.js debian/toppic-common/usr/share/toppic/topview/visual/js/prsm/FileSaver.js rm -f debian/toppic-common/usr/share/toppic/topview/js/lib/download/FileSaver.js ln -s ../../../../../javascript/filesaver/FileSaver.js debian/toppic-common/usr/share/toppic/topview/js/lib/download/FileSaver.js rm -f debian/toppic-common/usr/share/toppic/topview/inspect/js/download/FileSaver.js ln -s ../../../../../javascript/filesaver/FileSaver.js debian/toppic-common/usr/share/toppic/topview/inspect/js/download/FileSaver.js rm -f debian/toppic-common/usr/share/toppic/topview/js/lib/bootstrap/bootstrap.min.js ln -s ../../../../../nodejs/bootstrap/dist/js/bootstrap.min.js debian/toppic-common/usr/share/toppic/topview/js/lib/bootstrap/bootstrap.min.js rm -f debian/toppic-common/usr/share/toppic/topview/inspect/js/download/FileSaver.js ln -s ../../../../../javascript/filesaver/FileSaver.js debian/toppic-common/usr/share/toppic/topview/inspect/js/download/FileSaver.js dh_strip_nondeterminism -i -O--buildsystem=cmake Using 1605116207 as canonical time Normalizing debian/toppic-common/usr/share/toppic/topview/css/images/sort_asc.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/css/images/sort_desc_disabled.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/css/images/sort_asc_disabled.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/css/images/sort_both.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/css/images/forward_enabled_hover.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/css/images/sort_desc.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/css/images/back_disabled.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/inspect/js/spectrum_graph/images/download.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/inspect/js/spectrum_graph/images/svg.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/js/spectrum_graph/images/download.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/js/spectrum_graph/images/svg.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/js/spectrum_graph/images/png.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/visual/images/back_enabled_hover.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/visual/images/back_enabled.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/visual/images/forward_disabled.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/visual/images/forward_enabled.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/visual/images/sort_asc.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/visual/images/sort_desc_disabled.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/inspect/js/spectrum_graph/images/png.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/inspect/images/download.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/inspect/images/upload-2935442_960_720.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/inspect/images/download-1915749_960_720.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/inspect/images/download1.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/inspect/images/svg.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/inspect/images/info.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/inspect/images/png.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/visual/images/sort_asc_disabled.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/visual/images/sort_both.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/visual/images/forward_enabled_hover.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/visual/images/sort_desc.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/visual/images/back_disabled.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/css/images/back_enabled_hover.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/css/images/back_enabled.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/css/images/forward_disabled.png using File::StripNondeterminism::handlers::png Normalizing debian/toppic-common/usr/share/toppic/topview/css/images/forward_enabled.png using File::StripNondeterminism::handlers::png dh_compress -i -O--buildsystem=cmake cd debian/toppic-common chmod a-x usr/share/doc/toppic-common/changelog.Debian gzip -9nf usr/share/doc/toppic-common/changelog.Debian cd '/build/toppic-zz6kFN/toppic-1.3.0+dfsg1' dh_fixperms -i -O--buildsystem=cmake find debian/toppic-common -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/toppic-common ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/toppic-common/usr/share/doc -type f -a -true -a ! -regex 'debian/toppic-common/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/toppic-common/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/toppic-common -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 dh_missing -i -O--buildsystem=cmake dh_installdeb -i -O--buildsystem=cmake install -d debian/toppic-common/DEBIAN dh_gencontrol -i -O--buildsystem=cmake echo misc:Depends= >> debian/toppic-common.substvars echo misc:Pre-Depends= >> debian/toppic-common.substvars dpkg-gencontrol -ptoppic-common -ldebian/changelog -Tdebian/toppic-common.substvars -Pdebian/toppic-common chmod 0644 -- debian/toppic-common/DEBIAN/control chown 0:0 -- debian/toppic-common/DEBIAN/control dh_md5sums -i -O--buildsystem=cmake cd debian/toppic-common >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/toppic-common/DEBIAN/md5sums chown 0:0 -- debian/toppic-common/DEBIAN/md5sums dh_builddeb -i -O--buildsystem=cmake dpkg-deb --build debian/toppic-common .. dpkg-deb: building package 'toppic-common' in '../toppic-common_1.3.0+dfsg1-4_all.deb'. dpkg-genbuildinfo --build=all dpkg-genchanges --build=all >../toppic_1.3.0+dfsg1-4_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/toppic-zz6kFN /tmp/toppic-1.3.0+dfsg1-47iu4qd5x I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.0_XSBaliib... I: success in 18306.9695 seconds md5: toppic-common_1.3.0+dfsg1-4_all.deb: OK sha1: toppic-common_1.3.0+dfsg1-4_all.deb: OK sha256: toppic-common_1.3.0+dfsg1-4_all.deb: OK Checksums: OK