Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/t/tiledb-r/tiledb-r_0.13.0-1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/tiledb-r-0.13.0-1o5l6pd02/tiledb-r_0.13.0-1_amd64.buildinfo Get source package info: tiledb-r=0.13.0-1 Source URL: http://snapshot.notset.fr/mr/package/tiledb-r/0.13.0-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6+b1 binutils=2.38-4 binutils-common=2.38-4 binutils-x86-64-linux-gnu=2.38-4 bsdextrautils=2.38-4 bsdutils=1:2.38-4 build-essential=12.9 bzip2=1.0.8-5 ca-certificates=20211016 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.3.0-1 dash=0.5.11+git20210903+057cd650a4ed-8 dctrl-tools=2.24-3+b1 debconf=1.5.79 debhelper=13.7.1 debianutils=5.7-0.2 dh-autoreconf=20 dh-r=20210816 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.7 dpkg-dev=1.21.7 dwz=0.14-1 file=1:5.41-4 findutils=4.9.0-3 fontconfig=2.13.1-4.4 fontconfig-config=2.13.1-4.4 fonts-dejavu-core=2.37-2 g++=4:11.2.0-2 g++-11=11.3.0-1 gcc=4:11.2.0-2 gcc-11=11.3.0-1 gcc-11-base=11.3.0-1 gcc-12-base=12.1.0-2 gettext=0.21-6 gettext-base=0.21-6 gfortran=4:11.2.0-2 gfortran-11=11.3.0-1 grep=3.7-1 groff-base=1.22.4-8 gzip=1.12-1 hostname=3.23 icu-devtools=71.1-3 init-system-helpers=1.62 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libalgorithm-c3-perl=0.11-1 libarchive-zip-perl=1.68-1 libasan6=11.3.0-1 libatomic1=12.1.0-2 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libb-hooks-endofscope-perl=0.26-1 libb-hooks-op-check-perl=0.22-1+b4 libbinutils=2.38-4 libblas-dev=3.10.1-1 libblas3=3.10.1-1 libblkid1=2.38-4 libbrotli1=1.0.9-2+b3 libbsd0=0.11.6-1 libbz2-1.0=1.0.8-5 libbz2-dev=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dev=2.33-7 libcairo2=1.16.0-5 libcap-ng0=0.7.9-2.2+b2 libcap2=1:2.44-1 libcc1-0=12.1.0-2 libclass-c3-perl=0.35-1 libclass-load-perl=0.25-1 libclass-load-xs-perl=0.10-1+b6 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38-4 libctf0=2.38-4 libcurl3-gnutls=7.83.1-1+b1 libcurl4=7.83.1-1+b1 libdata-optlist-perl=0.112-1 libdatrie1=0.2.13-2 libdb5.3=5.3.28+dfsg1-0.9 libdebconfclient0=0.262 libdebhelper-perl=13.7.1 libdeflate0=1.10-2 libdevel-callchecker-perl=0.008-1+b3 libdevel-globaldestruction-perl=0.14-1.1 libdevel-overloadinfo-perl=0.007-1 libdevel-stacktrace-perl=2.0400-1 libdist-checkconflicts-perl=0.11-1.1 libdpkg-perl=1.21.7 libdynaloader-functions-perl=0.003-1.1 libelf1=0.187-1 libencode-locale-perl=1.05-1.1 libeval-closure-perl=0.14-1 libexpat1=2.4.8-1 libffi8=3.4.2-4 libfile-stripnondeterminism-perl=1.13.0-1 libfile-which-perl=1.27-1 libfmt8=8.1.1+ds1-2 libfontconfig1=2.13.1-4.4 libfreetype6=2.12.1+dfsg-2 libfribidi0=1.0.8-2.1 libgcc-11-dev=11.3.0-1 libgcc-s1=12.1.0-2 libgcrypt20=1.10.1-2 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgfortran-11-dev=11.3.0-1 libgfortran5=12.1.0-2 libglib2.0-0=2.72.1-1 libgmp10=2:6.2.1+dfsg-3 libgnutls30=3.7.4-2 libgomp1=12.1.0-2 libgpg-error0=1.45-2 libgraphite2-3=1.3.14-1 libgssapi-krb5-2=1.19.2-2+b2 libharfbuzz0b=2.7.4-1+b1 libhogweed6=3.7.3-1 libhttp-date-perl=6.05-1 libhttp-message-perl=6.36-1 libice6=2:1.0.10-1 libicu-dev=71.1-3 libicu71=71.1-3 libidn2-0=2.3.2-2 libio-html-perl=1.004-3 libisl23=0.24-2 libitm1=12.1.0-2 libjbig0=2.1-3.1+b2 libjpeg-dev=1:2.1.2-1 libjpeg62-turbo=1:2.1.2-1 libjpeg62-turbo-dev=1:2.1.2-1 libk5crypto3=1.19.2-2+b2 libkeyutils1=1.6.1-3 libkrb5-3=1.19.2-2+b2 libkrb5support0=1.19.2-2+b2 liblapack-dev=3.10.1-1 liblapack3=3.10.1-1 libldap-2.5-0=2.5.12+dfsg-1 liblsan0=12.1.0-2 liblwp-mediatypes-perl=6.04-1 liblz4-1=1.9.3-2 liblzma-dev=5.2.5-2.1 liblzma5=5.2.5-2.1 libmagic-mgc=1:5.41-4 libmagic1=1:5.41-4 libmd0=1.0.4-1 libmodule-implementation-perl=0.09-1.1 libmodule-runtime-conflicts-perl=0.003-1.1 libmodule-runtime-perl=0.016-1 libmoose-perl=2.2200-1+b1 libmount1=2.38-4 libmpc3=1.2.1-2 libmpfr6=4.1.0-3 libmro-compat-perl=0.15-1 libnamespace-clean-perl=0.27-1 libncurses-dev=6.3+20220423-2 libncurses5-dev=6.3+20220423-2 libncurses6=6.3+20220423-2 libncursesw6=6.3+20220423-2 libnettle8=3.7.3-1 libnghttp2-14=1.47.0-1+b1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libp11-kit0=0.24.1-1 libpackage-deprecationmanager-perl=0.17-1.1 libpackage-stash-perl=0.40-1 libpackage-stash-xs-perl=0.29-1+b3 libpam-modules=1.4.0-13 libpam-modules-bin=1.4.0-13 libpam-runtime=1.4.0-13 libpam0g=1.4.0-13 libpango-1.0-0=1.50.7+ds-1 libpangocairo-1.0-0=1.50.7+ds-1 libpangoft2-1.0-0=1.50.7+ds-1 libpaper-utils=1.1.28+b1 libpaper1=1.1.28+b1 libparams-classify-perl=0.015-1+b4 libparams-util-perl=1.102-1+b2 libpcre16-3=2:8.39-14 libpcre2-16-0=10.40-1 libpcre2-32-0=10.40-1 libpcre2-8-0=10.40-1 libpcre2-dev=10.40-1 libpcre2-posix3=10.40-1 libpcre3=2:8.39-14 libpcre3-dev=2:8.39-14 libpcre32-3=2:8.39-14 libpcrecpp0v5=2:8.39-14 libperl5.34=5.34.0-4 libpipeline1=1.5.6-1 libpixman-1-0=0.40.0-1 libpng-dev=1.6.37-5 libpng16-16=1.6.37-5 libpsl5=0.21.0-1.2 libquadmath0=12.1.0-2 libreadline-dev=8.1.2-1.2 libreadline8=8.1.2-1.2 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.28+dfsg-5 libsasl2-modules-db=2.1.28+dfsg-5 libscalar-list-utils-perl=1:1.62-1 libseccomp2=2.5.4-1 libselinux1=3.3-1+b2 libsigsegv2=2.14-1 libsm6=2:1.2.3-1 libsmartcols1=2.38-4 libspdlog1=1:1.9.2+ds-0.2 libssh2-1=1.10.0-3+b1 libssl3=3.0.3-3 libstdc++-11-dev=11.3.0-1 libstdc++6=12.1.0-2 libsub-exporter-perl=0.988-1 libsub-exporter-progressive-perl=0.001013-1 libsub-identify-perl=0.14-1+b4 libsub-install-perl=0.928-1.1 libsub-name-perl=0.26-1+b2 libsub-override-perl=0.09-2 libswitch-perl=2.17-2.1 libsystemd0=250.4-1 libtasn1-6=4.18.0-4 libtcl8.6=8.6.12+dfsg-1 libthai-data=0.1.29-1 libthai0=0.1.29-1 libtiff5=4.3.0-7 libtiledb-dev=2.9.0-2 libtiledb2.9=2.9.0-2 libtimedate-perl=2.3300-2 libtinfo6=6.3+20220423-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtk8.6=8.6.12-1 libtool=2.4.7-4 libtry-tiny-perl=0.31-1 libtsan0=11.3.0-1 libubsan1=12.1.0-2 libuchardet0=0.0.7-1 libudev1=250.4-1 libunistring2=1.0-1 liburi-perl=5.10-1 libuuid1=2.38-4 libvariable-magic-perl=0.62-1+b4 libwebp7=1.2.2-2+b1 libwww-curl-perl=4.17-7+b2 libwww-curl-simple-perl=0.100191-2 libx11-6=2:1.7.5-1 libx11-data=2:1.7.5-1 libxau6=1:1.0.9-1 libxcb-render0=1.14-3 libxcb-shm0=1.14-3 libxcb1=1.14-3 libxdmcp6=1:1.1.2-3 libxext6=2:1.3.4-1 libxft2=2.3.4-1 libxml2=2.9.14+dfsg-1 libxmuu1=2:1.1.3-3 libxrender1=1:0.9.10-1 libxss1=1:1.2.3-1 libxt6=1:1.2.1-1 libzstd1=1.5.2+dfsg-1 linux-libc-dev=5.17.6-1+b1 littler=0.3.15-1 login=1:4.11.1+dfsg1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.2-1 mawk=1.3.4.20200120-3+b1 ncurses-base=6.3+20220423-2 ncurses-bin=6.3+20220423-2 openssl=3.0.3-3 patch=2.7.6-7 perl=5.34.0-4 perl-base=5.34.0-4 perl-modules-5.34=5.34.0-4 pkg-config=0.29.2-1 po-debconf=1.0.21+nmu1 r-base-core=4.2.0-1+b1 r-base-dev=4.2.0-1 r-cran-bit=4.0.4+dfsg-1 r-cran-bit64=4.0.5-1 r-cran-lattice=0.20-45-3 r-cran-littler=0.3.15-1 r-cran-nanotime=0.3.6-1 r-cran-pkgkitten=0.2.2-2 r-cran-rcpp=1.0.8.3-1 r-cran-rcppcctz=0.2.10-1 r-cran-rcppdate=0.0.3-2 r-cran-zoo=1.8-10-1 readline-common=8.1.2-1.2 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sysvinit-utils=3.03-1 tar=1.34+dfsg-1 tzdata=2022a-1 ucf=3.0043 unzip=6.0-26 util-linux=2.38-4 util-linux-extra=2.38-4 x11-common=1:7.7+23 xauth=1:1.1.1-1 xdg-utils=1.1.3-4.1 xz-utils=5.2.5-2.1 zip=3.0-12 zlib1g=1:1.2.11.dfsg-4 zlib1g-dev=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220611T030612Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220611T030612Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220519T145256Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220516T211705Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d tiledb-r=0.13.0-1 && mkdir -p /build/tiledb-r-YQcZe1 && dpkg-source --no-check -x /*.dsc /build/tiledb-r-YQcZe1/tiledb-r-0.13.0 && chown -R builduser:builduser /build/tiledb-r-YQcZe1" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/tiledb-r-YQcZe1/tiledb-r-0.13.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1652800185" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/tiledb-r-YQcZe1 /tmp/tiledb-r-0.13.0-1o5l6pd02 bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220516T211705Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.eIYUz4uQ0S as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.eIYUz4uQ0S Reading package lists... Building dependency tree... util-linux is already the newest version (2.38-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 135 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220516T211705Z unstable/main amd64 libfakeroot amd64 1.28-1 [48.2 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220516T211705Z unstable/main amd64 fakeroot amd64 1.28-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 135 kB in 0s (1106 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4628 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.28-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.28-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.28-1_amd64.deb ... Unpacking fakeroot (1.28-1) ... Setting up libfakeroot:amd64 (1.28-1) ... Setting up fakeroot (1.28-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220611T030612Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220611T030612Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220519T145256Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220516T211705Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.eIYUz4uQ0S Get:1 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm InRelease [130 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220519T145256Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220516T211705Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm/main Sources [12.0 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm/main amd64 Packages [11.5 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220519T145256Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220519T145256Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220519T145256Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220519T145256Z unstable/main amd64 Packages [12.4 MB] Fetched 36.3 MB in 29s (1249 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.eIYUz4uQ0S I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d tiledb-r=0.13.0-1 && mkdir -p /build/tiledb-r-YQcZe1 && dpkg-source --no-check -x /*.dsc /build/tiledb-r-YQcZe1/tiledb-r-0.13.0 && chown -R builduser:builduser /build/tiledb-r-YQcZe1"' exec /tmp/mmdebstrap.eIYUz4uQ0S Reading package lists... NOTICE: 'tiledb-r' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/edd/r-cran-tiledb.git Please use: git clone https://salsa.debian.org/edd/r-cran-tiledb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 391 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm/main tiledb-r 0.13.0-1 (dsc) [1885 B] Get:2 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm/main tiledb-r 0.13.0-1 (tar) [386 kB] Get:3 http://snapshot.notset.fr/archive/debian/20220611T030612Z bookworm/main tiledb-r 0.13.0-1 (diff) [3320 B] Fetched 391 kB in 0s (1023 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'tiledb-r_0.13.0-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting tiledb-r in /build/tiledb-r-YQcZe1/tiledb-r-0.13.0 dpkg-source: info: unpacking tiledb-r_0.13.0.orig.tar.gz dpkg-source: info: unpacking tiledb-r_0.13.0-1.debian.tar.xz I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/tiledb-r-YQcZe1/tiledb-r-0.13.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1652800185" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.eIYUz4uQ0S dpkg-buildpackage: info: source package tiledb-r dpkg-buildpackage: info: source version 0.13.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Dirk Eddelbuettel dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules build-arch dh build-arch --buildsystem R dh_update_autotools_config -a -O--buildsystem=R dh_autoreconf -a -O--buildsystem=R dh_auto_configure -a -O--buildsystem=R dh_auto_build -a -O--buildsystem=R dh_auto_test -a -O--buildsystem=R create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --buildsystem R dh_testroot -a -O--buildsystem=R dh_prep -a -O--buildsystem=R debian/rules override_dh_auto_install make[1]: Entering directory '/build/tiledb-r-YQcZe1/tiledb-r-0.13.0' dh_auto_install I: R Package: tiledb Version: 0.13.0 I: Building using R version 4.2.0-1 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Tue, 17 May 2022 10:09:45 -0500 mkdir -p /build/tiledb-r-YQcZe1/tiledb-r-0.13.0/debian/r-cran-tiledb/usr/lib/R/site-library R CMD INSTALL -l /build/tiledb-r-YQcZe1/tiledb-r-0.13.0/debian/r-cran-tiledb/usr/lib/R/site-library --clean . "--built-timestamp='Tue, 17 May 2022 10:09:45 -0500'" Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory * installing *source* package ‘tiledb’ ... file ‘configure’ has the wrong MD5 checksum ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ -std=gnu++14 accepts -g... yes checking for g++ -std=gnu++14 option to enable C++11 features... none needed checking how to run the C++ preprocessor... g++ -std=gnu++14 -E checking whether the compiler supports GNU C++... (cached) yes checking whether g++ -std=gnu++14 accepts -g... (cached) yes checking for g++ -std=gnu++14 option to enable C++11 features... (cached) none needed checking for pkg-config... /usr/bin/pkg-config checking if pkg-config knows TileDB... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for tiledb/tiledb.h... yes configure: creating ./config.status config.status: creating src/Makevars ** libs make[2]: Entering directory '/build/tiledb-r-YQcZe1/tiledb-r-0.13.0/src' g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c arrowio.cpp -o arrowio.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c deprecation.cpp -o deprecation.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c durations.cpp -o durations.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c libtiledb.cpp -o libtiledb.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c nullable.cpp -o nullable.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c shmem.cpp -o shmem.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c utilities.cpp -o utilities.o g++ -std=gnu++17 -shared -L/usr/lib/R/lib -Wl,-z,relro -o tiledb.so RcppExports.o arrowio.o deprecation.o durations.o libtiledb.o nullable.o shmem.o utilities.o -ltiledb -L/usr/lib/R/lib -lR if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ] && [ -f ../inst/tiledb/lib/libtiledb.dylib ] && [ -f tiledb.so ]; then install_name_tool -change libz.1.dylib @rpath/libz.1.dylib ../inst/tiledb/lib/libtiledb.dylib; install_name_tool -add_rpath @loader_path/../tiledb/lib tiledb.so; fi make[2]: Leaving directory '/build/tiledb-r-YQcZe1/tiledb-r-0.13.0/src' make[2]: Entering directory '/build/tiledb-r-YQcZe1/tiledb-r-0.13.0/src' make[2]: Leaving directory '/build/tiledb-r-YQcZe1/tiledb-r-0.13.0/src' installing to /build/tiledb-r-YQcZe1/tiledb-r-0.13.0/debian/r-cran-tiledb/usr/lib/R/site-library/00LOCK-tiledb-r-0.13.0/00new/tiledb/libs ** R ** inst ** byte-compile and prepare package for lazy loading Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory ** help *** installing help indices ** building package indices Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory ** installing vignettes ** testing if installed package can be loaded from temporary location Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning in normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning in normalizePath("~") : path[1]="/nonexistent": No such file or directory ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning in normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning in normalizePath("~") : path[1]="/nonexistent": No such file or directory ** testing if installed package keeps a record of temporary installation path * DONE (tiledb) rm -f /build/tiledb-r-YQcZe1/tiledb-r-0.13.0/debian/r-cran-tiledb/usr/lib/R/site-library/tiledb/LICENSE rm -f /build/tiledb-r-YQcZe1/tiledb-r-0.13.0/debian/r-cran-tiledb/usr/lib/R/site-library/tiledb/LICENSE.txt Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 300. Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 301. Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 304. I: Using r-cran-tinytest for Suggests:tinytest I: Using r-cran-simplermarkdown for Suggests:simplermarkdown I: Using r-cran-curl for Suggests:curl I: Using r-cran-bit64 for Suggests:bit64 I: Using r-cran-matrix for Suggests:Matrix I: Using r-cran-palmerpenguins for Suggests:palmerpenguins W: Cannot find a debian package for Suggests:nycflights13 I: Using r-cran-data.table for Suggests:data.table I: Using r-cran-tibble for Suggests:tibble I: Using r-cran-rcpp for Imports:Rcpp (>= 1.0.8) I: Using r-cran-nanotime for Imports:nanotime I: Using r-cran-rcpp for LinkingTo:Rcpp I: Use r-cran-tiledb as Debian binary package for variables substitution rm -f /build/tiledb-r-YQcZe1/tiledb-r-0.13.0/debian/r-cran-tiledb/usr/lib/R/site-library/tiledb/doc/*html rm -f /build/tiledb-r-YQcZe1/tiledb-r-0.13.0/debian/r-cran-tiledb/usr/lib/R/site-library/tiledb/notebooks/*html (cd /build/tiledb-r-YQcZe1/tiledb-r-0.13.0/debian/r-cran-tiledb/usr/lib/R/site-library/tiledb/examples; \ chmod 0755 filters.R \ quickstart_sparse_heter.R \ quickstart_sparse_string.R \ writing_dense_sparse.R ) make[1]: Leaving directory '/build/tiledb-r-YQcZe1/tiledb-r-0.13.0' dh_installdocs -a -O--buildsystem=R dh_installchangelogs -a -O--buildsystem=R dh_installinit -a -O--buildsystem=R dh_perl -a -O--buildsystem=R dh_link -a -O--buildsystem=R dh_strip_nondeterminism -a -O--buildsystem=R dh_compress -a -O--buildsystem=R dh_fixperms -a -O--buildsystem=R dh_missing -a -O--buildsystem=R dh_strip -a -O--buildsystem=R dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -a -O--buildsystem=R dh_gencontrol -a -O--buildsystem=R dpkg-gencontrol: warning: package r-cran-tiledb: substitution variable ${R:Suggests} unused, but is defined dpkg-gencontrol: warning: package r-cran-tiledb: substitution variable ${R:Suggests} unused, but is defined dh_md5sums -a -O--buildsystem=R dh_builddeb -a -O--buildsystem=R dpkg-deb: building package 'r-cran-tiledb-dbgsym' in '../r-cran-tiledb-dbgsym_0.13.0-1_amd64.deb'. dpkg-deb: building package 'r-cran-tiledb' in '../r-cran-tiledb_0.13.0-1_amd64.deb'. dpkg-genbuildinfo --build=any -O../tiledb-r_0.13.0-1_amd64.buildinfo dpkg-genchanges --build=any -O../tiledb-r_0.13.0-1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/tiledb-r-YQcZe1 /tmp/tiledb-r-0.13.0-1o5l6pd02 I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.eIYUz4uQ0S... I: success in 561.6990 seconds md5: r-cran-tiledb-dbgsym_0.13.0-1_amd64.deb: OK md5: r-cran-tiledb_0.13.0-1_amd64.deb: OK sha1: r-cran-tiledb-dbgsym_0.13.0-1_amd64.deb: OK sha1: r-cran-tiledb_0.13.0-1_amd64.deb: OK sha256: r-cran-tiledb-dbgsym_0.13.0-1_amd64.deb: OK sha256: r-cran-tiledb_0.13.0-1_amd64.deb: OK Checksums: OK