Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/t/tiledb-r/tiledb-r_0.12.0-1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/tiledb-r-0.12.0-1qce6hlbk/tiledb-r_0.12.0-1_amd64.buildinfo Get source package info: tiledb-r=0.12.0-1 Source URL: http://snapshot.notset.fr/mr/package/tiledb-r/0.12.0-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6 binutils=2.38-3 binutils-common=2.38-3 binutils-x86-64-linux-gnu=2.38-3 bsdextrautils=2.38-3 bsdutils=1:2.38-2 build-essential=12.9 bzip2=1.0.8-5 ca-certificates=20211016 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.2.0-19 dash=0.5.11+git20210903+057cd650a4ed-8 dctrl-tools=2.24-3+b1 debconf=1.5.79 debhelper=13.6 debianutils=5.7-0.1 dh-autoreconf=20 dh-r=20210816 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.7 dpkg-dev=1.21.7 dwz=0.14-1 file=1:5.41-3 findutils=4.9.0-2 fontconfig=2.13.1-4.4 fontconfig-config=2.13.1-4.4 fonts-dejavu-core=2.37-2 g++=4:11.2.0-2 g++-11=11.2.0-19 gcc=4:11.2.0-2 gcc-11=11.2.0-19 gcc-11-base=11.2.0-19 gcc-12-base=12-20220319-1 gettext=0.21-6 gettext-base=0.21-6 gfortran=4:11.2.0-2 gfortran-11=11.2.0-19 grep=3.7-1 groff-base=1.22.4-8 gzip=1.12-1 hostname=3.23 icu-devtools=67.1-7 init-system-helpers=1.62 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libalgorithm-c3-perl=0.11-1 libarchive-zip-perl=1.68-1 libasan6=11.2.0-19 libatomic1=12-20220319-1 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libb-hooks-endofscope-perl=0.26-1 libb-hooks-op-check-perl=0.22-1+b4 libbinutils=2.38-3 libblas-dev=3.10.0-2 libblas3=3.10.0-2 libblkid1=2.38-2 libbrotli1=1.0.9-2+b3 libbsd0=0.11.6-1 libbz2-1.0=1.0.8-5 libbz2-dev=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dev=2.33-7 libcairo2=1.16.0-5 libcap-ng0=0.7.9-2.2+b2 libcap2=1:2.44-1 libcapnp-0.9.1=0.9.1-4 libcc1-0=12-20220319-1 libclass-c3-perl=0.35-1 libclass-load-perl=0.25-1 libclass-load-xs-perl=0.10-1+b6 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38-3 libctf0=2.38-3 libcurl3-gnutls=7.82.0-2 libcurl4=7.82.0-2 libdata-optlist-perl=0.112-1 libdatrie1=0.2.13-2 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.261 libdebhelper-perl=13.6 libdeflate0=1.10-2 libdevel-callchecker-perl=0.008-1+b3 libdevel-globaldestruction-perl=0.14-1.1 libdevel-overloadinfo-perl=0.007-1 libdevel-stacktrace-perl=2.0400-1 libdist-checkconflicts-perl=0.11-1.1 libdpkg-perl=1.21.7 libdynaloader-functions-perl=0.003-1.1 libelf1=0.186-1 libencode-locale-perl=1.05-1.1 libeval-closure-perl=0.14-1 libexpat1=2.4.8-1 libffi8=3.4.2-4 libfile-stripnondeterminism-perl=1.13.0-1 libfile-which-perl=1.27-1 libfmt8=8.1.1+ds1-2 libfontconfig1=2.13.1-4.4 libfreetype6=2.11.1+dfsg-1 libfribidi0=1.0.8-2.1 libgcc-11-dev=11.2.0-19 libgcc-s1=12-20220319-1 libgcrypt20=1.10.1-2 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgfortran-11-dev=11.2.0-19 libgfortran5=12-20220319-1 libglib2.0-0=2.72.0-1+b1 libgmp10=2:6.2.1+dfsg-3 libgnutls30=3.7.3-4+b1 libgomp1=12-20220319-1 libgpg-error0=1.43-3 libgraphite2-3=1.3.14-1 libgssapi-krb5-2=1.19.2-2+b1 libharfbuzz0b=2.7.4-1 libhogweed6=3.7.3-1 libhttp-date-perl=6.05-1 libhttp-message-perl=6.36-1 libice6=2:1.0.10-1 libicu-dev=67.1-7 libicu67=67.1-7 libidn2-0=2.3.2-2 libio-html-perl=1.004-3 libisl23=0.24-2 libitm1=12-20220319-1 libjbig0=2.1-3.1+b2 libjpeg-dev=1:2.1.2-1 libjpeg62-turbo=1:2.1.2-1 libjpeg62-turbo-dev=1:2.1.2-1 libk5crypto3=1.19.2-2+b1 libkeyutils1=1.6.1-3 libkrb5-3=1.19.2-2+b1 libkrb5support0=1.19.2-2+b1 liblapack-dev=3.10.0-2 liblapack3=3.10.0-2 libldap-2.5-0=2.5.11+dfsg-1 liblsan0=12-20220319-1 liblwp-mediatypes-perl=6.04-1 liblz4-1=1.9.3-2 liblzma-dev=5.2.5-2.1 liblzma5=5.2.5-2.1 libmagic-mgc=1:5.41-3 libmagic1=1:5.41-3 libmd0=1.0.4-1 libmodule-implementation-perl=0.09-1.1 libmodule-runtime-conflicts-perl=0.003-1.1 libmodule-runtime-perl=0.016-1 libmoose-perl=2.2200-1+b1 libmount1=2.38-2 libmpc3=1.2.1-2 libmpfr6=4.1.0-3 libmro-compat-perl=0.15-1 libnamespace-clean-perl=0.27-1 libncurses-dev=6.3-2 libncurses5-dev=6.3-2 libncurses6=6.3-2 libncursesw6=6.3-2 libnettle8=3.7.3-1 libnghttp2-14=1.43.0-1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libp11-kit0=0.24.0-6 libpackage-deprecationmanager-perl=0.17-1.1 libpackage-stash-perl=0.40-1 libpackage-stash-xs-perl=0.29-1+b3 libpam-modules=1.4.0-11 libpam-modules-bin=1.4.0-11 libpam-runtime=1.4.0-11 libpam0g=1.4.0-11 libpango-1.0-0=1.50.6+ds-2 libpangocairo-1.0-0=1.50.6+ds-2 libpangoft2-1.0-0=1.50.6+ds-2 libpaper-utils=1.1.28+b1 libpaper1=1.1.28+b1 libparams-classify-perl=0.015-1+b4 libparams-util-perl=1.102-1+b2 libpcre16-3=2:8.39-14 libpcre2-16-0=10.39-4 libpcre2-32-0=10.39-4 libpcre2-8-0=10.39-4 libpcre2-dev=10.39-4 libpcre2-posix3=10.39-4 libpcre3=2:8.39-14 libpcre3-dev=2:8.39-14 libpcre32-3=2:8.39-14 libpcrecpp0v5=2:8.39-14 libperl5.34=5.34.0-4 libpipeline1=1.5.5-1 libpixman-1-0=0.40.0-1 libpng-dev=1.6.37-3 libpng16-16=1.6.37-3 libpsl5=0.21.0-1.2 libquadmath0=12-20220319-1 libreadline-dev=8.1.2-1.2 libreadline8=8.1.2-1.2 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.28+dfsg-2+b1 libsasl2-modules-db=2.1.28+dfsg-2+b1 libscalar-list-utils-perl=1:1.62-1 libseccomp2=2.5.3-2 libselinux1=3.3-1+b2 libsigsegv2=2.14-1 libsm6=2:1.2.3-1 libsmartcols1=2.38-3 libspdlog1=1:1.9.2+ds-0.2 libssh2-1=1.10.0-3 libssl1.1=1.1.1n-1 libstdc++-11-dev=11.2.0-19 libstdc++6=12-20220319-1 libsub-exporter-perl=0.988-1 libsub-exporter-progressive-perl=0.001013-1 libsub-identify-perl=0.14-1+b4 libsub-install-perl=0.928-1.1 libsub-name-perl=0.26-1+b2 libsub-override-perl=0.09-2 libswitch-perl=2.17-2.1 libsystemd0=250.4-1 libtasn1-6=4.18.0-4 libtcl8.6=8.6.12+dfsg-1 libthai-data=0.1.29-1 libthai0=0.1.29-1 libtiff5=4.3.0-6 libtiledb-dev=2.8.0-1 libtiledb2.7=2.8.0-1 libtimedate-perl=2.3300-2 libtinfo6=6.3-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtk8.6=8.6.12-1 libtool=2.4.7-3 libtry-tiny-perl=0.31-1 libtsan0=11.2.0-19 libubsan1=12-20220319-1 libuchardet0=0.0.7-1 libudev1=250.4-1 libunistring2=1.0-1 liburi-perl=5.10-1 libuuid1=2.38-2 libvariable-magic-perl=0.62-1+b4 libwebp7=1.2.2-2+b1 libwww-curl-perl=4.17-7+b2 libwww-curl-simple-perl=0.100191-2 libx11-6=2:1.7.5-1 libx11-data=2:1.7.5-1 libxau6=1:1.0.9-1 libxcb-render0=1.14-3 libxcb-shm0=1.14-3 libxcb1=1.14-3 libxdmcp6=1:1.1.2-3 libxext6=2:1.3.4-1 libxft2=2.3.4-1 libxml2=2.9.13+dfsg-1 libxmuu1=2:1.1.3-3 libxrender1=1:0.9.10-1 libxss1=1:1.2.3-1 libxt6=1:1.2.1-1 libzstd1=1.5.2+dfsg-1 linux-libc-dev=5.16.18-1 littler=0.3.15-1 login=1:4.11.1+dfsg1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.2-1 mawk=1.3.4.20200120-3+b1 ncurses-base=6.3-2 ncurses-bin=6.3-2 openssl=1.1.1n-1 patch=2.7.6-7 perl=5.34.0-4 perl-base=5.34.0-4 perl-modules-5.34=5.34.0-4 pkg-config=0.29.2-1 po-debconf=1.0.21+nmu1 r-base-core=4.1.3.20220408-1 r-base-dev=4.1.3.20220408-1 r-cran-bit=4.0.4+dfsg-1 r-cran-bit64=4.0.5-1 r-cran-lattice=0.20-45-1 r-cran-littler=0.3.15-1 r-cran-nanotime=0.3.6-1 r-cran-pkgkitten=0.2.2-2 r-cran-rcpp=1.0.8.3-1 r-cran-rcppcctz=0.2.10-1 r-cran-rcppdate=0.0.3-2 r-cran-zoo=1.8-9-1 readline-common=8.1.2-1.2 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sysvinit-utils=3.01-1 tar=1.34+dfsg-1 tzdata=2022a-1 ucf=3.0043 unzip=6.0-26 util-linux=2.38-2 util-linux-extra=2.38-2 x11-common=1:7.7+23 xauth=1:1.1.1-1 xdg-utils=1.1.3-4.1 xz-utils=5.2.5-2.1 zip=3.0-12 zlib1g=1:1.2.11.dfsg-4 zlib1g-dev=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220414T152932Z/ unstable main deb-src http://snapshot.notset.fr/archive/debian/20220414T152932Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220414T090031Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220413T211711Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d tiledb-r=0.12.0-1 && mkdir -p /build/tiledb-r-mAaocI && dpkg-source --no-check -x /*.dsc /build/tiledb-r-mAaocI/tiledb-r-0.12.0 && chown -R builduser:builduser /build/tiledb-r-mAaocI" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/tiledb-r-mAaocI/tiledb-r-0.12.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1649937111" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/tiledb-r-mAaocI /tmp/tiledb-r-0.12.0-1qce6hlbk bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220413T211711Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.JAcdbp3Znq as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.JAcdbp3Znq Reading package lists... Building dependency tree... util-linux is already the newest version (2.38-2). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 135 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220413T211711Z unstable/main amd64 libfakeroot amd64 1.28-1 [48.2 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220413T211711Z unstable/main amd64 fakeroot amd64 1.28-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 135 kB in 0s (936 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4700 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.28-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.28-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.28-1_amd64.deb ... Unpacking fakeroot (1.28-1) ... Setting up libfakeroot:amd64 (1.28-1) ... Setting up fakeroot (1.28-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220414T152932Z/ unstable main deb-src http://snapshot.notset.fr/archive/debian/20220414T152932Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220414T090031Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220413T211711Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.JAcdbp3Znq Get:1 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable InRelease [165 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220414T090031Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220413T211711Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable/main Sources [12.9 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable/main amd64 Packages [12.4 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220414T090031Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220414T090031Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220414T090031Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220414T090031Z unstable/main amd64 Packages [12.4 MB] Fetched 38.0 MB in 31s (1244 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.JAcdbp3Znq I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d tiledb-r=0.12.0-1 && mkdir -p /build/tiledb-r-mAaocI && dpkg-source --no-check -x /*.dsc /build/tiledb-r-mAaocI/tiledb-r-0.12.0 && chown -R builduser:builduser /build/tiledb-r-mAaocI"' exec /tmp/mmdebstrap.JAcdbp3Znq Reading package lists... NOTICE: 'tiledb-r' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/edd/r-cran-tiledb.git Please use: git clone https://salsa.debian.org/edd/r-cran-tiledb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 385 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable/main tiledb-r 0.12.0-1 (dsc) [1885 B] Get:2 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable/main tiledb-r 0.12.0-1 (tar) [380 kB] Get:3 http://snapshot.notset.fr/archive/debian/20220414T152932Z unstable/main tiledb-r 0.12.0-1 (diff) [3164 B] Fetched 385 kB in 0s (987 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'tiledb-r_0.12.0-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting tiledb-r in /build/tiledb-r-mAaocI/tiledb-r-0.12.0 dpkg-source: info: unpacking tiledb-r_0.12.0.orig.tar.gz dpkg-source: info: unpacking tiledb-r_0.12.0-1.debian.tar.xz I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/tiledb-r-mAaocI/tiledb-r-0.12.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1649937111" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.JAcdbp3Znq dpkg-buildpackage: info: source package tiledb-r dpkg-buildpackage: info: source version 0.12.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Dirk Eddelbuettel dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules build-arch dh build-arch --buildsystem R dh_update_autotools_config -a -O--buildsystem=R dh_autoreconf -a -O--buildsystem=R dh_auto_configure -a -O--buildsystem=R dh_auto_build -a -O--buildsystem=R dh_auto_test -a -O--buildsystem=R create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --buildsystem R dh_testroot -a -O--buildsystem=R dh_prep -a -O--buildsystem=R debian/rules override_dh_auto_install make[1]: Entering directory '/build/tiledb-r-mAaocI/tiledb-r-0.12.0' dh_auto_install I: R Package: tiledb Version: 0.12.0 I: Building using R version 4.1.3.20220408-1 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Thu, 14 Apr 2022 06:51:51 -0500 mkdir -p /build/tiledb-r-mAaocI/tiledb-r-0.12.0/debian/r-cran-tiledb/usr/lib/R/site-library R CMD INSTALL -l /build/tiledb-r-mAaocI/tiledb-r-0.12.0/debian/r-cran-tiledb/usr/lib/R/site-library --clean . "--built-timestamp='Thu, 14 Apr 2022 06:51:51 -0500'" Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory * installing *source* package ‘tiledb’ ... file ‘configure’ has the wrong MD5 checksum ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ -std=gnu++14 accepts -g... yes checking for g++ -std=gnu++14 option to enable C++11 features... none needed checking how to run the C++ preprocessor... g++ -std=gnu++14 -E checking whether the compiler supports GNU C++... (cached) yes checking whether g++ -std=gnu++14 accepts -g... (cached) yes checking for g++ -std=gnu++14 option to enable C++11 features... (cached) none needed checking for pkg-config... /usr/bin/pkg-config checking if pkg-config knows TileDB... yes checking for pkg-config checking TileDB version... >= 2.0.0 checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for tiledb/tiledb.h... yes configure: creating ./config.status config.status: creating src/Makevars ** libs make[2]: Entering directory '/build/tiledb-r-mAaocI/tiledb-r-0.12.0/src' g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I/usr/include/tiledb -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-uzEjFP/r-base-4.1.3.20220408=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I/usr/include/tiledb -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-uzEjFP/r-base-4.1.3.20220408=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c arrowio.cpp -o arrowio.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I/usr/include/tiledb -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-uzEjFP/r-base-4.1.3.20220408=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c deprecation.cpp -o deprecation.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I/usr/include/tiledb -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-uzEjFP/r-base-4.1.3.20220408=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c durations.cpp -o durations.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I/usr/include/tiledb -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-uzEjFP/r-base-4.1.3.20220408=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c libtiledb.cpp -o libtiledb.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I/usr/include/tiledb -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-uzEjFP/r-base-4.1.3.20220408=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c nullable.cpp -o nullable.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I/usr/include/tiledb -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-uzEjFP/r-base-4.1.3.20220408=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c shmem.cpp -o shmem.o g++ -std=gnu++17 -I"/usr/share/R/include" -DNDEBUG -I../inst/include/ -I/usr/include/tiledb -I'/usr/lib/R/site-library/Rcpp/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-uzEjFP/r-base-4.1.3.20220408=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c utilities.cpp -o utilities.o g++ -std=gnu++17 -shared -L/usr/lib/R/lib -Wl,-z,relro -o tiledb.so RcppExports.o arrowio.o deprecation.o durations.o libtiledb.o nullable.o shmem.o utilities.o -ltiledb -L/usr/lib/R/lib -lR if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ] && [ -f ../inst/tiledb/lib/libtiledb.dylib ] && [ -f tiledb.so ]; then install_name_tool -change libz.1.dylib @rpath/libz.1.dylib ../inst/tiledb/lib/libtiledb.dylib; install_name_tool -add_rpath @loader_path/../tiledb/lib tiledb.so; fi make[2]: Leaving directory '/build/tiledb-r-mAaocI/tiledb-r-0.12.0/src' make[2]: Entering directory '/build/tiledb-r-mAaocI/tiledb-r-0.12.0/src' make[2]: Leaving directory '/build/tiledb-r-mAaocI/tiledb-r-0.12.0/src' installing to /build/tiledb-r-mAaocI/tiledb-r-0.12.0/debian/r-cran-tiledb/usr/lib/R/site-library/00LOCK-tiledb-r-0.12.0/00new/tiledb/libs ** R ** inst ** byte-compile and prepare package for lazy loading Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory ** help *** installing help indices ** building package indices Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory ** installing vignettes ** testing if installed package can be loaded from temporary location Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning in normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning in normalizePath("~") : path[1]="/nonexistent": No such file or directory ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning message: In normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning in normalizePath("~") : path[1]="/nonexistent": No such file or directory Warning in normalizePath("~") : path[1]="/nonexistent": No such file or directory ** testing if installed package keeps a record of temporary installation path * DONE (tiledb) rm -f /build/tiledb-r-mAaocI/tiledb-r-0.12.0/debian/r-cran-tiledb/usr/lib/R/site-library/tiledb/LICENSE rm -f /build/tiledb-r-mAaocI/tiledb-r-0.12.0/debian/r-cran-tiledb/usr/lib/R/site-library/tiledb/LICENSE.txt Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 300. Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 301. Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 304. I: Using r-cran-tinytest for Suggests:tinytest I: Using r-cran-simplermarkdown for Suggests:simplermarkdown I: Using r-cran-curl for Suggests:curl I: Using r-cran-bit64 for Suggests:bit64 I: Using r-cran-matrix for Suggests:Matrix I: Using r-cran-palmerpenguins for Suggests:palmerpenguins W: Cannot find a debian package for Suggests:nycflights13 I: Using r-cran-data.table for Suggests:data.table I: Using r-cran-tibble for Suggests:tibble I: Using r-cran-rcpp for Imports:Rcpp (>= 1.0.8) I: Using r-cran-nanotime for Imports:nanotime I: Using r-cran-rcpp for LinkingTo:Rcpp I: Use r-cran-tiledb as Debian binary package for variables substitution rm -f /build/tiledb-r-mAaocI/tiledb-r-0.12.0/debian/r-cran-tiledb/usr/lib/R/site-library/tiledb/doc/*html rm -f /build/tiledb-r-mAaocI/tiledb-r-0.12.0/debian/r-cran-tiledb/usr/lib/R/site-library/tiledb/notebooks/*html (cd /build/tiledb-r-mAaocI/tiledb-r-0.12.0/debian/r-cran-tiledb/usr/lib/R/site-library/tiledb/examples; \ chmod 0755 filters.R \ quickstart_sparse_heter.R \ quickstart_sparse_string.R \ writing_dense_sparse.R ) make[1]: Leaving directory '/build/tiledb-r-mAaocI/tiledb-r-0.12.0' dh_installdocs -a -O--buildsystem=R dh_installchangelogs -a -O--buildsystem=R dh_installinit -a -O--buildsystem=R dh_perl -a -O--buildsystem=R dh_link -a -O--buildsystem=R dh_strip_nondeterminism -a -O--buildsystem=R dh_compress -a -O--buildsystem=R dh_fixperms -a -O--buildsystem=R dh_missing -a -O--buildsystem=R dh_strip -a -O--buildsystem=R dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -a -O--buildsystem=R dh_gencontrol -a -O--buildsystem=R dpkg-gencontrol: warning: package r-cran-tiledb: substitution variable ${R:Suggests} unused, but is defined dpkg-gencontrol: warning: package r-cran-tiledb: substitution variable ${R:Suggests} unused, but is defined dh_md5sums -a -O--buildsystem=R dh_builddeb -a -O--buildsystem=R dpkg-deb: building package 'r-cran-tiledb-dbgsym' in '../r-cran-tiledb-dbgsym_0.12.0-1_amd64.deb'. dpkg-deb: building package 'r-cran-tiledb' in '../r-cran-tiledb_0.12.0-1_amd64.deb'. dpkg-genbuildinfo --build=any -O../tiledb-r_0.12.0-1_amd64.buildinfo dpkg-genchanges --build=any -O../tiledb-r_0.12.0-1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/tiledb-r-mAaocI /tmp/tiledb-r-0.12.0-1qce6hlbk I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.JAcdbp3Znq... I: success in 752.4600 seconds md5: r-cran-tiledb-dbgsym_0.12.0-1_amd64.deb: OK md5: r-cran-tiledb_0.12.0-1_amd64.deb: OK sha1: r-cran-tiledb-dbgsym_0.12.0-1_amd64.deb: OK sha1: r-cran-tiledb_0.12.0-1_amd64.deb: OK sha256: r-cran-tiledb-dbgsym_0.12.0-1_amd64.deb: OK sha256: r-cran-tiledb_0.12.0-1_amd64.deb: OK Checksums: OK