Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/t/tandem-mass/tandem-mass_201702011-1+b1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/tandem-mass-201702011-1+b1rrlxcvoh/tandem-mass_201702011-1+b1_amd64.buildinfo Get source package info: tandem-mass=1:201702011-1 Source URL: http://snapshot.notset.fr/mr/package/tandem-mass/1:201702011-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11 automake=1:1.16.1-4 autopoint=0.19.8.1-9 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.46 bash=5.0-4 binutils=2.32.51.20190727-1 binutils-common=2.32.51.20190727-1 binutils-x86-64-linux-gnu=2.32.51.20190727-1 bsdmainutils=11.1.2+b1 bsdutils=1:2.34-0.1 build-essential=12.6 bzip2=1.0.6-9.2 coreutils=8.30-3 cpp=4:8.3.0-1 cpp-8=8.3.0-19 dash=0.5.10.2-6 debconf=1.5.73 debhelper=12.3 debianutils=4.8.6.3 dh-autoreconf=19 dh-strip-nondeterminism=1.4.0-1 diffutils=1:3.7-3 dpkg=1.19.7 dpkg-dev=1.19.7 dwz=0.12.20190723-1 fdisk=2.34-0.1 file=1:5.37-5 findutils=4.6.0+git+20190510-2 g++=4:8.3.0-1 g++-8=8.3.0-19 gcc=4:8.3.0-1 gcc-8=8.3.0-19 gcc-8-base=8.3.0-19 gcc-9-base=9.1.0-10 gettext=0.19.8.1-9 gettext-base=0.19.8.1-9 grep=3.3-1 groff-base=1.22.4-3 gzip=1.9-3 hostname=3.21 init-system-helpers=1.57 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-4 libarchive-zip-perl=1.64-1 libasan5=9.1.0-10 libatomic1=9.1.0-10 libattr1=1:2.4.48-4 libaudit-common=1:2.8.5-2 libaudit1=1:2.8.5-2 libbinutils=2.32.51.20190727-1 libblkid1=2.34-0.1 libbsd0=0.9.1-2 libbz2-1.0=1.0.6-9.2 libc-bin=2.28-10 libc-dev-bin=2.28-10 libc6=2.28-10 libc6-dev=2.28-10 libcap-ng0=0.7.9-2 libcc1-0=9.1.0-10 libcroco3=0.6.12-3 libdb5.3=5.3.28+dfsg1-0.6 libdebconfclient0=0.249 libdpkg-perl=1.19.7 libelf1=0.176-1.1 libexpat1=2.2.7-1 libexpat1-dev=2.2.7-1 libfdisk1=2.34-0.1 libffi6=3.2.1-9 libfile-stripnondeterminism-perl=1.4.0-1 libgcc-8-dev=8.3.0-19 libgcc1=1:9.1.0-10 libgcrypt20=1.8.4-5 libgdbm-compat4=1.18.1-4+b1 libgdbm6=1.18.1-4+b1 libglib2.0-0=2.60.6-1 libgmp10=2:6.1.2+dfsg-4 libgomp1=9.1.0-10 libgpg-error0=1.36-7 libicu63=63.2-2 libisl19=0.20-2 libitm1=9.1.0-10 liblsan0=9.1.0-10 liblz4-1=1.8.3-1 liblzma5=5.2.4-1 libmagic-mgc=1:5.37-5 libmagic1=1:5.37-5 libmount1=2.34-0.1 libmpc3=1.1.0-1 libmpfr6=4.0.2-1 libmpx2=8.3.0-19 libncurses6=6.1+20190713-2 libncursesw6=6.1+20190713-2 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpcre2-8-0=10.32-5 libpcre3=2:8.39-12 libperl5.28=5.28.1-6 libpipeline1=1.5.1-2 libquadmath0=9.1.0-10 libseccomp2=2.4.1-2 libselinux1=2.9-2 libsigsegv2=2.12-2 libsmartcols1=2.34-0.1 libstdc++-8-dev=8.3.0-19 libstdc++6=9.1.0-10 libsub-override-perl=0.09-2 libsystemd0=241-7 libtinfo6=6.1+20190713-2 libtool=2.4.6-10 libtsan0=9.1.0-10 libubsan1=9.1.0-10 libuchardet0=0.0.6-3 libudev1=241-7 libunistring2=0.9.10-2 libuuid1=2.34-0.1 libxml2=2.9.4+dfsg1-7+b3 linux-libc-dev=4.19.37-6 login=1:4.7-2 m4=1.4.18-2 make=4.2.1-1.2 man-db=2.8.6.1-1 mawk=1.3.3-17+b3 ncurses-base=6.1+20190713-2 ncurses-bin=6.1+20190713-2 patch=2.7.6-6 perl=5.28.1-6 perl-base=5.28.1-6 perl-modules-5.28=5.28.1-6 po-debconf=1.0.21 sed=4.7-1 sensible-utils=0.0.12 sysvinit-utils=2.95-4 tar=1.30+dfsg-6 util-linux=2.34-0.1 xz-utils=5.2.4-1 zlib1g=1:1.2.11.dfsg-1 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20190812T140702Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20190806T094738Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d tandem-mass=1:201702011-1 && mkdir -p /build/tandem-mass-XcP5fT && dpkg-source --no-check -x /*.dsc /build/tandem-mass-XcP5fT/tandem-mass-201702011 && cd /build/tandem-mass-XcP5fT/tandem-mass-201702011 && { printf '%s' 'tandem-mass (1:201702011-1+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * rebuild on buildd -- amd64 Build Daemon (x86-grnet-01) Wed, 07 Aug 2019 15:49:39 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/tandem-mass-XcP5fT" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/tandem-mass-XcP5fT/tandem-mass-201702011 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1565192979" dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/tandem-mass-XcP5fT /tmp/tandem-mass-201702011-1+b1rrlxcvoh bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20190806T094738Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.8JgZz_vZJ0 as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.8JgZz_vZJ0 Reading package lists... Building dependency tree... util-linux is already the newest version (2.34-0.1). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 132 kB of archives. After this operation, 373 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20190806T094738Z unstable/main amd64 libfakeroot amd64 1.23-1 [45.9 kB] Get:2 http://snapshot.notset.fr/archive/debian/20190806T094738Z unstable/main amd64 fakeroot amd64 1.23-1 [85.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 132 kB in 0s (1160 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4453 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.23-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.23-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.23-1_amd64.deb ... Unpacking fakeroot (1.23-1) ... Setting up libfakeroot:amd64 (1.23-1) ... Setting up fakeroot (1.23-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.28-10) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20190812T140702Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20190806T094738Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.8JgZz_vZJ0 Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Get:2 http://snapshot.notset.fr/archive/debian/20190812T140702Z unstable InRelease [149 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20190806T094738Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20190812T140702Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20190812T140702Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20190812T140702Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20190812T140702Z unstable/main amd64 Packages [11.3 MB] Fetched 34.0 MB in 31s (1085 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.8JgZz_vZJ0 I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d tandem-mass=1:201702011-1 && mkdir -p /build/tandem-mass-XcP5fT && dpkg-source --no-check -x /*.dsc /build/tandem-mass-XcP5fT/tandem-mass-201702011 && cd /build/tandem-mass-XcP5fT/tandem-mass-201702011 && { printf '%s' 'tandem-mass (1:201702011-1+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * rebuild on buildd -- amd64 Build Daemon (x86-grnet-01) Wed, 07 Aug 2019 15:49:39 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/tandem-mass-XcP5fT"' exec /tmp/mmdebstrap.8JgZz_vZJ0 Reading package lists... NOTICE: 'tandem-mass' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/tandem-mass.git Please use: git clone https://salsa.debian.org/debichem-team/tandem-mass.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2682 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main tandem-mass 1:201702011-1 (dsc) [2031 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main tandem-mass 1:201702011-1 (tar) [2666 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main tandem-mass 1:201702011-1 (diff) [13.9 kB] Fetched 2682 kB in 2s (1199 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'tandem-mass_201702011-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting tandem-mass in /build/tandem-mass-XcP5fT/tandem-mass-201702011 dpkg-source: info: unpacking tandem-mass_201702011.orig.tar.gz dpkg-source: info: unpacking tandem-mass_201702011-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debian-makefile dpkg-source: info: applying fix-missing-include-string-h dpkg-source: info: applying nullptr-fixes I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/tandem-mass-XcP5fT/tandem-mass-201702011 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1565192979" dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.8JgZz_vZJ0 dpkg-buildpackage: info: source package tandem-mass dpkg-buildpackage: info: source version 1:201702011-1+b1 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by amd64 Build Daemon (x86-grnet-01) dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh_testdir dh_testroot dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/tandem-mass.substvars debian/files rm -fr -- debian/tandem-mass/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) rm -f bin/tandem rm -f src/*.d src/*.o rm -f build-stamp debian/rules build-arch dh_testdir dh_prep rm -f -- debian/tandem-mass.substvars rm -fr -- debian/.debhelper/generated/tandem-mass/ debian/tandem-mass/ debian/tmp/ dh_auto_build --sourcedirectory=src --buildsystem=makefile -- -f Makefile_ubuntu cd src && make -j1 -f Makefile_ubuntu make[1]: Entering directory '/build/tandem-mass-XcP5fT/tandem-mass-201702011/src' g++ -M -g -w -O2 mrefine.cpp > mrefine.d g++ -M -g -w -O2 mrefine.cpp | sed s/\\.o/.d/ > mrefine.d g++ -M -g -w -O2 saxmzxmlhandler.cpp > saxmzxmlhandler.d g++ -M -g -w -O2 saxmzxmlhandler.cpp | sed s/\\.o/.d/ > saxmzxmlhandler.d g++ -M -g -w -O2 MSNumpress.cpp > MSNumpress.d g++ -M -g -w -O2 MSNumpress.cpp | sed s/\\.o/.d/ > MSNumpress.d g++ -M -g -w -O2 msequtilities.cpp > msequtilities.d g++ -M -g -w -O2 msequtilities.cpp | sed s/\\.o/.d/ > msequtilities.d g++ -M -g -w -O2 p3mprocess.cpp > p3mprocess.d g++ -M -g -w -O2 p3mprocess.cpp | sed s/\\.o/.d/ > p3mprocess.d g++ -M -g -w -O2 saxtandeminputhandler.cpp > saxtandeminputhandler.d g++ -M -g -w -O2 saxtandeminputhandler.cpp | sed s/\\.o/.d/ > saxtandeminputhandler.d g++ -M -g -w -O2 mbiomlreport.cpp > mbiomlreport.d g++ -M -g -w -O2 mbiomlreport.cpp | sed s/\\.o/.d/ > mbiomlreport.d g++ -M -g -w -O2 masscalc.cpp > masscalc.d g++ -M -g -w -O2 masscalc.cpp | sed s/\\.o/.d/ > masscalc.d g++ -M -g -w -O2 mtermmods.cpp > mtermmods.d g++ -M -g -w -O2 mtermmods.cpp | sed s/\\.o/.d/ > mtermmods.d g++ -M -g -w -O2 saxgamlhandler.cpp > saxgamlhandler.d g++ -M -g -w -O2 saxgamlhandler.cpp | sed s/\\.o/.d/ > saxgamlhandler.d g++ -M -g -w -O2 mscore.cpp > mscore.d g++ -M -g -w -O2 mscore.cpp | sed s/\\.o/.d/ > mscore.d g++ -M -g -w -O2 mpmods.cpp > mpmods.d g++ -M -g -w -O2 mpmods.cpp | sed s/\\.o/.d/ > mpmods.d g++ -M -g -w -O2 tandem.cpp > tandem.d g++ -M -g -w -O2 tandem.cpp | sed s/\\.o/.d/ > tandem.d g++ -M -g -w -O2 p3.cpp > p3.d g++ -M -g -w -O2 p3.cpp | sed s/\\.o/.d/ > p3.d g++ -M -g -w -O2 saxsaphandler.cpp > saxsaphandler.d g++ -M -g -w -O2 saxsaphandler.cpp | sed s/\\.o/.d/ > saxsaphandler.d g++ -M -g -w -O2 stdafx.cpp > stdafx.d g++ -M -g -w -O2 stdafx.cpp | sed s/\\.o/.d/ > stdafx.d g++ -M -g -w -O2 saxbiomlhandler.cpp > saxbiomlhandler.d g++ -M -g -w -O2 saxbiomlhandler.cpp | sed s/\\.o/.d/ > saxbiomlhandler.d g++ -M -g -w -O2 mzid_report.cpp > mzid_report.d g++ -M -g -w -O2 mzid_report.cpp | sed s/\\.o/.d/ > mzid_report.d g++ -M -g -w -O2 msequencecollection.cpp > msequencecollection.d g++ -M -g -w -O2 msequencecollection.cpp | sed s/\\.o/.d/ > msequencecollection.d g++ -M -g -w -O2 saxtaxhandler.cpp > saxtaxhandler.d g++ -M -g -w -O2 saxtaxhandler.cpp | sed s/\\.o/.d/ > saxtaxhandler.d g++ -M -g -w -O2 p3msequenceserver.cpp > p3msequenceserver.d g++ -M -g -w -O2 p3msequenceserver.cpp | sed s/\\.o/.d/ > p3msequenceserver.d g++ -M -g -w -O2 mxxcleavage.cpp > mxxcleavage.d g++ -M -g -w -O2 mxxcleavage.cpp | sed s/\\.o/.d/ > mxxcleavage.d g++ -M -g -w -O2 saxhandler.cpp > saxhandler.d g++ -M -g -w -O2 saxhandler.cpp | sed s/\\.o/.d/ > saxhandler.d g++ -M -g -w -O2 mspectrumcondition.cpp > mspectrumcondition.d g++ -M -g -w -O2 mspectrumcondition.cpp | sed s/\\.o/.d/ > mspectrumcondition.d g++ -M -g -w -O2 mplugin.cpp > mplugin.d g++ -M -g -w -O2 mplugin.cpp | sed s/\\.o/.d/ > mplugin.d g++ -M -g -w -O2 msequenceserver.cpp > msequenceserver.d g++ -M -g -w -O2 msequenceserver.cpp | sed s/\\.o/.d/ > msequenceserver.d g++ -M -g -w -O2 xmltaxonomy.cpp > xmltaxonomy.d g++ -M -g -w -O2 xmltaxonomy.cpp | sed s/\\.o/.d/ > xmltaxonomy.d g++ -M -g -w -O2 saxmzmlhandler.cpp > saxmzmlhandler.d g++ -M -g -w -O2 saxmzmlhandler.cpp | sed s/\\.o/.d/ > saxmzmlhandler.d g++ -M -g -w -O2 mpam.cpp > mpam.d g++ -M -g -w -O2 mpam.cpp | sed s/\\.o/.d/ > mpam.d g++ -M -g -w -O2 loadmspectrum.cpp > loadmspectrum.d g++ -M -g -w -O2 loadmspectrum.cpp | sed s/\\.o/.d/ > loadmspectrum.d g++ -M -g -w -O2 mscore_tandem.cpp > mscore_tandem.d g++ -M -g -w -O2 mscore_tandem.cpp | sed s/\\.o/.d/ > mscore_tandem.d g++ -M -g -w -O2 mreport.cpp > mreport.d g++ -M -g -w -O2 mreport.cpp | sed s/\\.o/.d/ > mreport.d g++ -M -g -w -O2 xmlparameter.cpp > xmlparameter.d g++ -M -g -w -O2 xmlparameter.cpp | sed s/\\.o/.d/ > xmlparameter.d g++ -M -g -w -O2 saxmzdatahandler.cpp > saxmzdatahandler.d g++ -M -g -w -O2 saxmzdatahandler.cpp | sed s/\\.o/.d/ > saxmzdatahandler.d g++ -M -g -w -O2 saxmodhandler.cpp > saxmodhandler.d g++ -M -g -w -O2 saxmodhandler.cpp | sed s/\\.o/.d/ > saxmodhandler.d g++ -M -g -w -O2 mprocess.cpp > mprocess.d g++ -M -g -w -O2 mprocess.cpp | sed s/\\.o/.d/ > mprocess.d g++ -M -g -w -O2 base64.cpp > base64.d g++ -M -g -w -O2 base64.cpp | sed s/\\.o/.d/ > base64.d g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mscore_tandem.o mscore_tandem.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tandem.o tandem.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3mprocess.o p3mprocess.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzdatahandler.o saxmzdatahandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mspectrumcondition.o mspectrumcondition.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o masscalc.o masscalc.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mprocess.o mprocess.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mreport.o mreport.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loadmspectrum.o loadmspectrum.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequencecollection.o msequencecollection.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxtaxhandler.o saxtaxhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mscore.o mscore.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mrefine.o mrefine.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxtandeminputhandler.o saxtandeminputhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxhandler.o saxhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequtilities.o msequtilities.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o base64.o base64.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmodhandler.o saxmodhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stdafx.o stdafx.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mtermmods.o mtermmods.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o xmlparameter.o xmlparameter.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxsaphandler.o saxsaphandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzxmlhandler.o saxmzxmlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o xmltaxonomy.o xmltaxonomy.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxmzmlhandler.o saxmzmlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o msequenceserver.o msequenceserver.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mxxcleavage.o mxxcleavage.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3msequenceserver.o p3msequenceserver.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mzid_report.o mzid_report.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxbiomlhandler.o saxbiomlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o p3.o p3.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mpmods.o mpmods.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o saxgamlhandler.o saxgamlhandler.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mbiomlreport.o mbiomlreport.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mplugin.o mplugin.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o MSNumpress.o MSNumpress.cpp g++ -g -w -O2 -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mpam.o mpam.cpp g++ -g -w -O2 -o ../bin/tandem mscore_tandem.o tandem.o p3mprocess.o saxmzdatahandler.o mspectrumcondition.o masscalc.o mprocess.o mreport.o loadmspectrum.o msequencecollection.o saxtaxhandler.o mscore.o mrefine.o saxtandeminputhandler.o saxhandler.o msequtilities.o base64.o saxmodhandler.o stdafx.o mtermmods.o xmlparameter.o saxsaphandler.o saxmzxmlhandler.o xmltaxonomy.o saxmzmlhandler.o msequenceserver.o mxxcleavage.o p3msequenceserver.o mzid_report.o saxbiomlhandler.o p3.o mpmods.o saxgamlhandler.o mbiomlreport.o mplugin.o MSNumpress.o mpam.o -lpthread -L/usr/lib -lm -lexpat make[1]: Leaving directory '/build/tandem-mass-XcP5fT/tandem-mass-201702011/src' touch build-stamp fakeroot debian/rules binary-arch dh_testdir dh_testroot dh_installchangelogs install -d debian/tandem-mass/usr/share/doc/tandem-mass dh_installdocs install -d debian/.debhelper/generated/tandem-mass install -p -m0644 debian/copyright debian/tandem-mass/usr/share/doc/tandem-mass/copyright dh_installexamples dh_install install -d debian/tandem-mass/usr/bin cp --reflink=auto -a ./bin/tandem debian/tandem-mass/usr/bin/ dh_installman install -d debian/tandem-mass/usr/share/man/man1/ install -p -m0644 ./debian/tandem.1 debian/tandem-mass/usr/share/man/man1/tandem.1 man -l --recode UTF-8 ./debian/tandem-mass/usr/share/man/man1/tandem.1 > debian/tandem-mass/usr/share/man/man1/tandem.1.dh-new mv debian/tandem-mass/usr/share/man/man1/tandem.1.dh-new debian/tandem-mass/usr/share/man/man1/tandem.1 chmod 0644 -- debian/tandem-mass/usr/share/man/man1/tandem.1 dh_lintian install -d debian/tandem-mass/usr/share/lintian/overrides install -p -m0644 debian/tandem-mass.lintian-overrides debian/tandem-mass/usr/share/lintian/overrides/tandem-mass dh_strip -a install -d debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/99 objcopy --only-keep-debug --compress-debug-sections debian/tandem-mass/usr/bin/tandem debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/99/086586e850a68030615cfadaebe24f2b4d6118.debug chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/99/086586e850a68030615cfadaebe24f2b4d6118.debug chown 0:0 -- debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/99/086586e850a68030615cfadaebe24f2b4d6118.debug strip --remove-section=.comment --remove-section=.note debian/tandem-mass/usr/bin/tandem objcopy --add-gnu-debuglink debian/.debhelper/tandem-mass/dbgsym-root/usr/lib/debug/.build-id/99/086586e850a68030615cfadaebe24f2b4d6118.debug debian/tandem-mass/usr/bin/tandem install -d debian/.debhelper/tandem-mass/dbgsym-root/usr/share/doc ln -s tandem-mass debian/.debhelper/tandem-mass/dbgsym-root/usr/share/doc/tandem-mass-dbgsym dh_compress cd debian/tandem-mass chmod a-x usr/share/doc/tandem-mass/changelog.Debian usr/share/doc/tandem-mass/changelog.Debian.amd64 usr/share/man/man1/tandem.1 gzip -9nf usr/share/doc/tandem-mass/changelog.Debian usr/share/doc/tandem-mass/changelog.Debian.amd64 usr/share/man/man1/tandem.1 cd '/build/tandem-mass-XcP5fT/tandem-mass-201702011' dh_fixperms find debian/tandem-mass -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/tandem-mass ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/tandem-mass/usr/share/doc -type f -a -true -a ! -regex 'debian/tandem-mass/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/tandem-mass/usr/share/man debian/tandem-mass/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tandem-mass/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_installdeb install -d debian/tandem-mass/DEBIAN dh_shlibdeps dpkg-shlibdeps -Tdebian/tandem-mass.substvars debian/tandem-mass/usr/bin/tandem dh_gencontrol echo misc:Depends= >> debian/tandem-mass.substvars echo misc:Pre-Depends= >> debian/tandem-mass.substvars install -d debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN dpkg-gencontrol -ptandem-mass -ldebian/changelog -Tdebian/tandem-mass.substvars -Pdebian/.debhelper/tandem-mass/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=tandem-mass-dbgsym "-DDepends=tandem-mass (= \${binary:Version})" "-DDescription=debug symbols for tandem-mass" -DBuild-Ids=99086586e850a68030615cfadaebe24f2b4d6118 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptandem-mass -ldebian/changelog -Tdebian/tandem-mass.substvars -Pdebian/tandem-mass -UMulti-Arch chmod 0644 -- debian/tandem-mass/DEBIAN/control chown 0:0 -- debian/tandem-mass/DEBIAN/control dh_md5sums cd debian/tandem-mass >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/tandem-mass/DEBIAN/md5sums chown 0:0 -- debian/tandem-mass/DEBIAN/md5sums cd debian/.debhelper/tandem-mass/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/tandem-mass/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/tandem-mass .. dpkg-deb --build debian/.debhelper/tandem-mass/dbgsym-root .. dpkg-deb: building package 'tandem-mass' in '../tandem-mass_201702011-1+b1_amd64.deb'. dpkg-deb: building package 'tandem-mass-dbgsym' in '../tandem-mass-dbgsym_201702011-1+b1_amd64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../tandem-mass_201702011-1+b1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/tandem-mass-XcP5fT /tmp/tandem-mass-201702011-1+b1rrlxcvoh I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.8JgZz_vZJ0... I: success in 472.0328 seconds md5: Value of 'md5' differs for tandem-mass-dbgsym_201702011-1+b1_amd64.deb md5: Size differs for tandem-mass-dbgsym_201702011-1+b1_amd64.deb md5: Value of 'md5' differs for tandem-mass_201702011-1+b1_amd64.deb md5: Size differs for tandem-mass_201702011-1+b1_amd64.deb sha1: Value of 'sha1' differs for tandem-mass-dbgsym_201702011-1+b1_amd64.deb sha1: Size differs for tandem-mass-dbgsym_201702011-1+b1_amd64.deb sha1: Value of 'sha1' differs for tandem-mass_201702011-1+b1_amd64.deb sha1: Size differs for tandem-mass_201702011-1+b1_amd64.deb sha256: Value of 'sha256' differs for tandem-mass-dbgsym_201702011-1+b1_amd64.deb sha256: Size differs for tandem-mass-dbgsym_201702011-1+b1_amd64.deb sha256: Value of 'sha256' differs for tandem-mass_201702011-1+b1_amd64.deb sha256: Size differs for tandem-mass_201702011-1+b1_amd64.deb Checksums: FAIL Cannot generate diffoscope for tandem-mass-dbgsym_201702011-1+b1_amd64.deb: Cannot find URL: http://snapshot.notset.fr/mr/file/4efb88055de15b5011ec77009b346102ec05f3905e0f1028a4568097fe6ec612/download diffoscope run passed