Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/s/seqmagick/seqmagick_0.8.4-1_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/seqmagick-0.8.4-1z8qbiw6m/seqmagick_0.8.4-1_all.buildinfo Get source package info: seqmagick=0.8.4-1 Source URL: http://snapshot.notset.fr/mr/package/seqmagick/0.8.4-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11.1 automake=1:1.16.3-1 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.48 bash=5.1~rc3-1 binutils=2.35.1-4 binutils-common=2.35.1-4 binutils-x86-64-linux-gnu=2.35.1-4 bsdextrautils=2.36.1-2 bsdutils=1:2.36.1-2 build-essential=12.8 bzip2=1.0.8-4 coreutils=8.32-4+b1 cpp=4:10.2.0-1 cpp-10=10.2.1-1 dash=0.5.11+git20200708+dd9ef66-2 debconf=1.5.74 debhelper=13.3 debianutils=4.11.2 dh-autoreconf=19 dh-python=4.20201102 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13+20201015-2 file=1:5.39-3 findutils=4.7.0+git20201010-2 g++=4:10.2.0-1 g++-10=10.2.1-1 gcc=4:10.2.0-1 gcc-10=10.2.1-1 gcc-10-base=10.2.1-1 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 grep=3.6-1 groff-base=1.22.4-5 gzip=1.10-2 hostname=3.23 init-system-helpers=1.59 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libasan6=10.2.1-1 libatomic1=10.2.1-1 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3.1 libaudit1=1:2.8.5-3.1 libbinutils=2.35.1-4 libblas3=3.9.0-3 libblkid1=2.36.1-2 libbrotli1=1.0.9-2+b2 libbsd0=0.10.0-1 libbz2-1.0=1.0.8-4 libc-bin=2.31-5 libc-dev-bin=2.31-5 libc6=2.31-5 libc6-dev=2.31-5 libcap-ng0=0.7.9-2.2+b1 libcc1-0=10.2.1-1 libcom-err2=1.45.6-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.1-4 libctf0=2.35.1-4 libdb5.3=5.3.28+dfsg1-0.6 libdebconfclient0=0.255 libdebhelper-perl=13.3 libdpkg-perl=1.20.5 libelf1=0.182-1 libexpat1=2.2.10-1 libffi7=3.3-5 libfile-stripnondeterminism-perl=1.9.0-1 libfreetype6=2.10.4+dfsg-1 libgcc-10-dev=10.2.1-1 libgcc-s1=10.2.1-1 libgcrypt20=1.8.7-2 libgdbm-compat4=1.18.1-5.1 libgdbm6=1.18.1-5.1 libgfortran5=10.2.1-1 libglib2.0-0=2.66.3-2 libgmp10=2:6.2.1+dfsg-1 libgomp1=10.2.1-1 libgpg-error0=1.38-2 libgssapi-krb5-2=1.18.3-4 libicu67=67.1-5 libimagequant0=2.12.2-1.1 libisl23=0.23-1 libitm1=10.2.1-1 libjbig0=2.1-3.1+b2 libjpeg62-turbo=1:2.0.5-1.1 libk5crypto3=1.18.3-4 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-4 libkrb5support0=1.18.3-4 liblapack3=3.9.0-3 liblcms2-2=2.9-4+b1 liblsan0=10.2.1-1 liblz4-1=1.9.2-2 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.39-3 libmagic1=1:5.39-3 libmount1=2.36.1-2 libmpc3=1.2.0-1 libmpfr6=4.1.0-3 libncursesw6=6.2+20201114-1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpcre2-8-0=10.35-2 libpcre3=2:8.39-13 libperl5.32=5.32.0-5 libpipeline1=1.5.3-1 libpng16-16=1.6.37-3 libpython3-stdlib=3.9.0-4 libpython3.9-minimal=3.9.1-1 libpython3.9-stdlib=3.9.1-1 libquadmath0=10.2.1-1 libreadline8=8.1-1 libseccomp2=2.5.0-3 libselinux1=3.1-2+b1 libsigsegv2=2.12-2 libsmartcols1=2.36.1-2 libsqlite3-0=3.34.0-1 libssl1.1=1.1.1h-1 libstdc++-10-dev=10.2.1-1 libstdc++6=10.2.1-1 libsub-override-perl=0.09-2 libsystemd0=247.1-3 libtiff5=4.1.0+git191117-2 libtinfo6=6.2+20201114-1 libtirpc-common=1.2.6-3 libtirpc-dev=1.2.6-3 libtirpc3=1.2.6-3 libtool=2.4.6-14 libtsan0=10.2.1-1 libubsan1=10.2.1-1 libuchardet0=0.0.7-1 libudev1=247.1-3 libunistring2=0.9.10-4 libuuid1=2.36.1-2 libwebp6=0.6.1-2+b1 libwebpdemux2=0.6.1-2+b1 libwebpmux3=0.6.1-2+b1 libxau6=1:1.0.8-1+b2 libxcb1=1.14-2 libxdmcp6=1:1.1.2-3 libxml2=2.9.10+dfsg-6.3+b1 libzstd1=1.4.5+dfsg-4 linux-libc-dev=5.9.11-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 mailcap=3.67 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 media-types=1.0.1 mime-support=3.66 ncurses-base=6.2+20201114-1 ncurses-bin=6.2+20201114-1 patch=2.7.6-6 perl=5.32.0-5 perl-base=5.32.0-5 perl-modules-5.32=5.32.0-5 po-debconf=1.0.21 python3=3.9.0-4 python3-all=3.9.0-4 python3-biopython=1.78+dfsg-4 python3-distutils=3.8.6-1 python3-lib2to3=3.8.6-1 python3-minimal=3.9.0-4 python3-nose=1.3.7-7 python3-numpy=1:1.19.4-1+b1 python3-pil=8.0.1-1+b1 python3-pkg-resources=50.3.0-1 python3-pygtrie=2.2-1 python3-reportlab=3.5.56-1 python3-reportlab-accel=3.5.56-1 python3-setuptools=50.3.0-1 python3.9=3.9.1-1 python3.9-minimal=3.9.1-1 readline-common=8.1-1 sed=4.7-1 sensible-utils=0.0.12+nmu1 sysvinit-utils=2.96-5 tar=1.32+dfsg-1 tzdata=2020d-1 util-linux=2.36.1-2 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201224T205101Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20201207T144442Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d seqmagick=0.8.4-1 && mkdir -p /build/seqmagick-7OJKwr && dpkg-source --no-check -x /*.dsc /build/seqmagick-7OJKwr/seqmagick-0.8.4 && chown -R builduser:builduser /build/seqmagick-7OJKwr" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/seqmagick-7OJKwr/seqmagick-0.8.4 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1607520428" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/seqmagick-7OJKwr /tmp/seqmagick-0.8.4-1z8qbiw6m bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20201207T144442Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.kwSd3u_8N1 as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.kwSd3u_8N1 Reading package lists... Building dependency tree... util-linux is already the newest version (2.36.1-2). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20201207T144442Z unstable/main amd64 libfakeroot amd64 1.25.3-1.1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20201207T144442Z unstable/main amd64 fakeroot amd64 1.25.3-1.1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (573 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4614 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1.1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1.1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1.1_amd64.deb ... Unpacking fakeroot (1.25.3-1.1) ... Setting up libfakeroot:amd64 (1.25.3-1.1) ... Setting up fakeroot (1.25.3-1.1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-5) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201224T205101Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20201207T144442Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.kwSd3u_8N1 Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Get:2 http://snapshot.notset.fr/archive/debian/20201224T205101Z unstable InRelease [153 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20201207T144442Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20201224T205101Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20201224T205101Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20201224T205101Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20201224T205101Z unstable/main amd64 Packages [11.6 MB] Fetched 34.3 MB in 29s (1169 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.kwSd3u_8N1 I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d seqmagick=0.8.4-1 && mkdir -p /build/seqmagick-7OJKwr && dpkg-source --no-check -x /*.dsc /build/seqmagick-7OJKwr/seqmagick-0.8.4 && chown -R builduser:builduser /build/seqmagick-7OJKwr"' exec /tmp/mmdebstrap.kwSd3u_8N1 Reading package lists... NOTICE: 'seqmagick' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/seqmagick.git Please use: git clone https://salsa.debian.org/med-team/seqmagick.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 674 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main seqmagick 0.8.4-1 (dsc) [2087 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main seqmagick 0.8.4-1 (tar) [668 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main seqmagick 0.8.4-1 (diff) [4312 B] Fetched 674 kB in 1s (916 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'seqmagick_0.8.4-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting seqmagick in /build/seqmagick-7OJKwr/seqmagick-0.8.4 dpkg-source: info: unpacking seqmagick_0.8.4.orig.tar.gz dpkg-source: info: unpacking seqmagick_0.8.4-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying biopython_1.71_dual_coding_support.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/seqmagick-7OJKwr/seqmagick-0.8.4 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1607520428" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.kwSd3u_8N1 dpkg-buildpackage: info: source package seqmagick dpkg-buildpackage: info: source version 0.8.4-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/seqmagick-7OJKwr/seqmagick-0.8.4' dh_auto_clean I: pybuild base:232: python3.9 setup.py clean /usr/lib/python3/dist-packages/setuptools/dist.py:466: UserWarning: The version specified ('') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details. warnings.warn( running clean removing '/build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it rm -rf seqmagick/data rm -rf seqmagick.egg-info make[1]: Leaving directory '/build/seqmagick-7OJKwr/seqmagick-0.8.4' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-indep dh binary-indep --with python3 --buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_autoreconf -i -O--buildsystem=pybuild dh_auto_configure -i -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:466: UserWarning: The version specified ('') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details. warnings.warn( running config dh_auto_build -i -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:466: UserWarning: The version specified ('') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details. warnings.warn( running build running build_py creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick copying seqmagick/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick copying seqmagick/transform.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick copying seqmagick/fileformat.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands copying seqmagick/subcommands/info.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands copying seqmagick/subcommands/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands copying seqmagick/subcommands/common.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands copying seqmagick/subcommands/convert.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands copying seqmagick/subcommands/primer_trim.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands copying seqmagick/subcommands/mogrify.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands copying seqmagick/subcommands/quality_filter.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands copying seqmagick/subcommands/extract_ids.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands copying seqmagick/subcommands/backtrans_align.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test copying seqmagick/test/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test copying seqmagick/test/test_subcommands_backtrans_align.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test copying seqmagick/test/test_subcommands_quality_filter.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test copying seqmagick/test/test_transform.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test copying seqmagick/test/test_subcommands_common.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test copying seqmagick/test/test_subcommands_convert.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test copying seqmagick/test/test_primer_trim.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/scripts copying seqmagick/scripts/cli.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/scripts copying seqmagick/scripts/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/scripts creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration copying seqmagick/test/integration/test_convert.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration copying seqmagick/test/integration/test_extract_ids.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration copying seqmagick/test/integration/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration copying seqmagick/test/integration/test_mogrify.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration copying seqmagick/test/integration/test_info.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input1.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input5.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output3.nex -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output4.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input4_ambig.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output5.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2.nex -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input3.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2_ungap_cut.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input6.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output4.nex -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input2.fasta.bz2 -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output3.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input2.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/input2.fasta.gz -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data copying seqmagick/test/integration/data/output2.phy -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data dh_auto_test -i -O--buildsystem=pybuild I: pybuild base:232: cd /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build; python3.9 -m nose -v test_run (seqmagick.test.integration.test_convert.BasicConvertTestCase) ... ok test_run (seqmagick.test.integration.test_convert.BzipInputConvertTestCase) ... SKIP: bzip2 not supported test_run (seqmagick.test.integration.test_convert.BzipOutputConvertTestCase) ... SKIP: bzip2 not supported test_run (seqmagick.test.integration.test_convert.ConvertToNexusProteinTestCase) ... ok test_run (seqmagick.test.integration.test_convert.ConvertToNexusRNATestCase) ... ok test_run (seqmagick.test.integration.test_convert.ConvertToNexusTestCase) ... ok test_convert (seqmagick.test.integration.test_convert.ConvertToStdOutTestCase) ... ok test_convert_noformat (seqmagick.test.integration.test_convert.ConvertToStdOutTestCase) ... ok test_run (seqmagick.test.integration.test_convert.ConvertUngapCutTestCase) ... ok test_run (seqmagick.test.integration.test_convert.GzipInputConvertTestCase) ... ok test_run (seqmagick.test.integration.test_convert.GzipOutputConvertTestCase) ... ok test_run (seqmagick.test.integration.test_convert.TestConvertFromStdin) ... ok test_run (seqmagick.test.integration.test_convert.TestCutRelative) ... ok test_unknown_seq (seqmagick.test.integration.test_convert.TestCutRelative) ... ok test_run (seqmagick.test.integration.test_convert.TestSample) ... ok test_run (seqmagick.test.integration.test_convert.TestStdin) ... ok test_run (seqmagick.test.integration.test_convert.TestTranslateAmbiguous) ... ok test_descriptions (seqmagick.test.integration.test_extract_ids.Bz2ExtractIdsTestCase) ... SKIP: bzip2 not supported test_ids (seqmagick.test.integration.test_extract_ids.Bz2ExtractIdsTestCase) ... SKIP: bzip2 not supported test_descriptions (seqmagick.test.integration.test_extract_ids.GzipExtractIdsTestCase) ... ok test_ids (seqmagick.test.integration.test_extract_ids.GzipExtractIdsTestCase) ... ok test_descriptions (seqmagick.test.integration.test_extract_ids.SimpleExtractIdsTestCase) ... ok test_ids (seqmagick.test.integration.test_extract_ids.SimpleExtractIdsTestCase) ... ok test_info (seqmagick.test.integration.test_info.MultithreadedInfoTestCase) ... ok test_info (seqmagick.test.integration.test_info.SimpleBzip2InfoTestCase) ... SKIP: bzip2 not supported test_info (seqmagick.test.integration.test_info.SimpleGzipInfoTestCase) ... ok test_info (seqmagick.test.integration.test_info.SimpleInfoTestCase) ... ok test_run (seqmagick.test.integration.test_mogrify.MogrifyBzipInputTestCase) ... SKIP: bzip2 not supported test_run (seqmagick.test.integration.test_mogrify.MogrifyGzipInputTestCase) ... ok test_run (seqmagick.test.integration.test_mogrify.MogrifyUngapCutTestCase) ... ok test_all_different (seqmagick.test.test_primer_trim.HammingDistanceTestCase) ... ok test_ambiguous (seqmagick.test.test_primer_trim.HammingDistanceTestCase) ... ok test_basic (seqmagick.test.test_primer_trim.HammingDistanceTestCase) ... ok test_no_difference (seqmagick.test.test_primer_trim.HammingDistanceTestCase) ... ok test_unequal_length (seqmagick.test.test_primer_trim.HammingDistanceTestCase) ... ok Should fail if reverse primer occurs before forward primer ... ok test_basic (seqmagick.test.test_primer_trim.LocatePrimersTestCase) ... ok test_no_forward (seqmagick.test.test_primer_trim.LocatePrimersTestCase) ... ok test_no_reverse (seqmagick.test.test_primer_trim.LocatePrimersTestCase) ... ok test_align_exact (seqmagick.test.test_primer_trim.PrimerAlignerTestCase) ... ok test_align_gap (seqmagick.test.test_primer_trim.PrimerAlignerTestCase) ... ok test_max_score (seqmagick.test.test_primer_trim.PrimerAlignerTestCase) ... ok test_map_alignment (seqmagick.test.test_subcommands_backtrans_align.AlignmentMapperTestCase) ... ok test_map_alignment_excess_codons (seqmagick.test.test_subcommands_backtrans_align.AlignmentMapperTestCase) ... ok test_map_alignment_insufficient_codons (seqmagick.test.test_subcommands_backtrans_align.AlignmentMapperTestCase) ... ok test_validate_invalid (seqmagick.test.test_subcommands_backtrans_align.AlignmentMapperTestCase) ... ok test_validate_valid (seqmagick.test.test_subcommands_backtrans_align.AlignmentMapperTestCase) ... ok test_doubles (seqmagick.test.test_subcommands_backtrans_align.BatchTestCase) ... ok test_no_input (seqmagick.test.test_subcommands_backtrans_align.BatchTestCase) ... ok test_partial (seqmagick.test.test_subcommands_backtrans_align.BatchTestCase) ... ok test_singletons (seqmagick.test.test_subcommands_backtrans_align.BatchTestCase) ... ok test_provided_umask (seqmagick.test.test_subcommands_common.ApplyUmaskTestCase) ... ok test_user_umask (seqmagick.test.test_subcommands_common.ApplyUmaskTestCase) ... ok test_exception_leaves_unchanged (seqmagick.test.test_subcommands_common.AtomicWriteTestCase) ... ok test_write (seqmagick.test.test_subcommands_common.AtomicWriteTestCase) ... ok test_negative (seqmagick.test.test_subcommands_common.CutRangeTestCase) ... ok test_no_end (seqmagick.test.test_subcommands_common.CutRangeTestCase) ... ok test_no_start (seqmagick.test.test_subcommands_common.CutRangeTestCase) ... ok test_out_of_order (seqmagick.test.test_subcommands_common.CutRangeTestCase) ... ok test_start (seqmagick.test.test_subcommands_common.CutRangeTestCase) ... ok test_read (seqmagick.test.test_subcommands_common.FileTypeTestCase) ... ok test_read_bz2 (seqmagick.test.test_subcommands_common.FileTypeTestCase) ... SKIP: bzip2 not supported test_read_gz (seqmagick.test.test_subcommands_common.FileTypeTestCase) ... ok test_read_text (seqmagick.test.test_subcommands_common.FileTypeTestCase) ... ok test_stdin (seqmagick.test.test_subcommands_common.FileTypeTestCase) ... ok test_stdout (seqmagick.test.test_subcommands_common.FileTypeTestCase) ... ok test_write (seqmagick.test.test_subcommands_common.FileTypeTestCase) ... ok test_multi_arg (seqmagick.test.test_subcommands_common.PartialAppendTestCase) ... ok test_no_arg (seqmagick.test.test_subcommands_common.PartialAppendTestCase) ... ok test_single_arg (seqmagick.test.test_subcommands_common.PartialAppendTestCase) ... ok test_negative (seqmagick.test.test_subcommands_common.PositiveValueTestCase) ... ok test_positive (seqmagick.test.test_subcommands_common.PositiveValueTestCase) ... ok test_zero (seqmagick.test.test_subcommands_common.PositiveValueTestCase) ... ok test_multiple (seqmagick.test.test_subcommands_common.SequenceSlicesTestCase) ... ok test_single (seqmagick.test.test_subcommands_common.SequenceSlicesTestCase) ... ok test_argument_type (seqmagick.test.test_subcommands_convert.ArgumentTypeTestCase) ... ok test_parse (seqmagick.test.test_subcommands_convert.ArgumentTypeTestCase) ... ok test_parse (seqmagick.test.test_subcommands_convert.IdModificationTransformsTestCase) ... ok test_parse (seqmagick.test.test_subcommands_convert.OrderRespectedTestCase) ... ok test_parse (seqmagick.test.test_subcommands_convert.SeqSelectTransformsTestCase) ... ok test_parse (seqmagick.test.test_subcommands_convert.SequenceModTransformsTestCase) ... ok test_four_nt (seqmagick.test.test_subcommands_quality_filter.AllUnambiguousTestCase) ... ok test_one_nt (seqmagick.test.test_subcommands_quality_filter.AllUnambiguousTestCase) ... ok Test that the first record (with no Ns) does not get filtered ... ok test_invalid_action (seqmagick.test.test_subcommands_quality_filter.AmbiguousBaseFilterTestCase) ... ok test_truncate (seqmagick.test.test_subcommands_quality_filter.AmbiguousBaseFilterTestCase) ... ok test_primer_in_file (seqmagick.test.test_subcommands_quality_filter.BarcodePrimerTrieTestCase) ... ok test_primer_provided (seqmagick.test.test_subcommands_quality_filter.BarcodePrimerTrieTestCase) ... ok test_1 (seqmagick.test.test_subcommands_quality_filter.MaxAmbiguousFilterTestCase) ... ok test_10 (seqmagick.test.test_subcommands_quality_filter.MaxAmbiguousFilterTestCase) ... ok test_none (seqmagick.test.test_subcommands_quality_filter.MaxAmbiguousFilterTestCase) ... ok test_all_truncated (seqmagick.test.test_subcommands_quality_filter.MaxLengthFilterTestCase) ... ok test_none_truncated (seqmagick.test.test_subcommands_quality_filter.MaxLengthFilterTestCase) ... ok test_some_truncated (seqmagick.test.test_subcommands_quality_filter.MaxLengthFilterTestCase) ... ok test_all_pass (seqmagick.test.test_subcommands_quality_filter.MinLengthFilterTestCase) ... ok test_none_pass (seqmagick.test.test_subcommands_quality_filter.MinLengthFilterTestCase) ... ok test_some_pass (seqmagick.test.test_subcommands_quality_filter.MinLengthFilterTestCase) ... ok test_1 (seqmagick.test.test_subcommands_quality_filter.PctAmbiguousFilterTestCase) ... ok test_10 (seqmagick.test.test_subcommands_quality_filter.PctAmbiguousFilterTestCase) ... ok test_none (seqmagick.test.test_subcommands_quality_filter.PctAmbiguousFilterTestCase) ... ok test_filter_trim (seqmagick.test.test_subcommands_quality_filter.PrimerBarcodeFilterTestCase) ... ok test_nowindow_fail (seqmagick.test.test_subcommands_quality_filter.QualityFilterTestCase) ... ok test_nowindow_pass (seqmagick.test.test_subcommands_quality_filter.QualityFilterTestCase) ... ok test_send (seqmagick.test.test_subcommands_quality_filter.RecordEventListenerTestCase) ... ok test_window_pass (seqmagick.test.test_subcommands_quality_filter.WindowQualityFilterTestCase) ... ok test_window_truncate_mid (seqmagick.test.test_subcommands_quality_filter.WindowQualityFilterTestCase) ... ok test_window_truncate_noseq (seqmagick.test.test_subcommands_quality_filter.WindowQualityFilterTestCase) ... ok test_nowarn (seqmagick.test.test_transform.CodonWarningTableTestCase) ... ok test_warn (seqmagick.test.test_transform.CodonWarningTableTestCase) ... ok test_cut_sequences (seqmagick.test.test_transform.CutTestCase) ... ok test_full_sequence (seqmagick.test.test_transform.CutTestCase) ... ok test_no_sequences (seqmagick.test.test_transform.CutTestCase) ... ok test_basic (seqmagick.test.test_transform.DashesCleanupTestCase) ... ok test_basic (seqmagick.test.test_transform.DropColumnsTestCase) ... ok test_multi (seqmagick.test.test_transform.DropColumnsTestCase) ... ok test_filter (seqmagick.test.test_transform.ExcludeFromFileTestCase) ... ok Try specifying some minus values. ... ok Test that -0 returns all sequences ... ok Specifying more sequences than are in input records should return ... ok Try specifying some values. ... ok test_zero (seqmagick.test.test_transform.HeadTestCase) ... ok test_filter (seqmagick.test.test_transform.IncludeFromFileTestCase) ... ok test_invalid (seqmagick.test.test_transform.IsolateRegionTestCase) ... ok test_middle (seqmagick.test.test_transform.IsolateRegionTestCase) ... ok test_no_isolation (seqmagick.test.test_transform.IsolateRegionTestCase) ... ok test_single_loc (seqmagick.test.test_transform.IsolateRegionTestCase) ... ok test_all_pass (seqmagick.test.test_transform.MinUngapLengthTestCase) ... ok test_none_pass (seqmagick.test.test_transform.MinUngapLengthTestCase) ... ok test_partial (seqmagick.test.test_transform.MinUngapLengthTestCase) ... ok test_multicut (seqmagick.test.test_transform.MultiCutTestCase) ... ok test_mask (seqmagick.test.test_transform.MultiMaskSequences) ... ok test_mask_whole (seqmagick.test.test_transform.MultiMaskSequences) ... ok test_filter_description (seqmagick.test.test_transform.NameExcludeTestCase) ... ok test_filter_id (seqmagick.test.test_transform.NameExcludeTestCase) ... ok test_filter_description (seqmagick.test.test_transform.NameIncludeTestCase) ... ok test_filter_id (seqmagick.test.test_transform.NameIncludeTestCase) ... ok test_modify (seqmagick.test.test_transform.NamePrefixTestCase) ... ok test_modify (seqmagick.test.test_transform.NameSuffixTestCase) ... ok test_pattern_replace_anchored_add_to_description (seqmagick.test.test_transform.PatternReplaceTestCase) ... ok test_pattern_replace_anchored_id_from_description (seqmagick.test.test_transform.PatternReplaceTestCase) ... ok test_pattern_replace_anchored_match (seqmagick.test.test_transform.PatternReplaceTestCase) ... ok test_pattern_replace_anchored_nomatch (seqmagick.test.test_transform.PatternReplaceTestCase) ... ok test_pattern_replace_anchored_remove_from_description (seqmagick.test.test_transform.PatternReplaceTestCase) ... ok test_pattern_replace_anchored_transform_id (seqmagick.test.test_transform.PatternReplaceTestCase) ... ok Substitutions are case insensitive ... ok Make sure capturing groups work ... ok test_pattern_replace_none (seqmagick.test.test_transform.PatternReplaceTestCase) ... ok test_pattern_replace_static (seqmagick.test.test_transform.PatternReplaceTestCase) ... ok test_multi_pass (seqmagick.test.test_transform.RecordBufferTestCase) ... ok test_single_pass (seqmagick.test.test_transform.RecordBufferTestCase) ... ok test_exclude (seqmagick.test.test_transform.SeqPatternTestCase) ... ok test_include (seqmagick.test.test_transform.SeqPatternTestCase) ... ok test_basic_squeeze (seqmagick.test.test_transform.SqueezeTestCase) ... ok test_gap_proportion (seqmagick.test.test_transform.SqueezeTestCase) ... ok Threshold of 0.001 - nothing should be squeezed. ... ok Try specifying some plus values. ... ok Test that +0 returns all sequences ... ok test_tail_1 (seqmagick.test.test_transform.TailTestCase) ... ok test_tail_2 (seqmagick.test.test_transform.TailTestCase) ... ok test_tail_3 (seqmagick.test.test_transform.TailTestCase) ... ok test_dna_protein_gap (seqmagick.test.test_transform.TranslateTestCase) ... ok test_dna_protein_gap_stop (seqmagick.test.test_transform.TranslateTestCase) ... ok test_dna_protein_nogap (seqmagick.test.test_transform.TranslateTestCase) ... ok test_dna_protein_nogap_stop (seqmagick.test.test_transform.TranslateTestCase) ... ok test_dash_gap (seqmagick.test.test_transform.UngapSequencesTestCase) ... ok test_dot_gap (seqmagick.test.test_transform.UngapSequencesTestCase) ... ok ---------------------------------------------------------------------- Ran 166 tests in 2.594s OK (SKIP=7) create-stamp debian/debhelper-build-stamp dh_testroot -i -O--buildsystem=pybuild dh_prep -i -O--buildsystem=pybuild dh_auto_install -i -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick /usr/lib/python3/dist-packages/setuptools/dist.py:466: UserWarning: The version specified ('') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details. warnings.warn( running install running build running build_py running install_lib creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9 creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/info.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/common.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/convert.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/primer_trim.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/mogrify.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/quality_filter.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/extract_ids.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/backtrans_align.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/__pycache__/backtrans_align.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/__pycache__/primer_trim.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/__pycache__/quality_filter.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/__pycache__/extract_ids.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/__pycache__/convert.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/__pycache__/mogrify.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/__pycache__/__init__.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/__pycache__/common.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/subcommands/__pycache__/info.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/__pycache__ creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/test_subcommands_backtrans_align.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/test_subcommands_quality_filter.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/test_transform.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/test_convert.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/test_extract_ids.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/test_mogrify.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/input1.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/input5.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/output3.nex -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/output4.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/input4_ambig.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/output5.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/output2.nex -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/input3.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/output2_ungap_cut.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/input6.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/output4.nex -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/output2.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/input2.fasta.bz2 -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/output3.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/input2.fasta -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/__pycache__/__init__.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/input2.fasta.gz -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/data/output2.phy -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/__pycache__/test_mogrify.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/__pycache__/test_extract_ids.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/__pycache__/test_info.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/__pycache__/test_convert.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/__pycache__/__init__.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/integration/test_info.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/test_subcommands_common.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/test_subcommands_convert.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/__pycache__/test_transform.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/__pycache__/test_subcommands_backtrans_align.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/__pycache__/test_subcommands_common.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/__pycache__/test_subcommands_convert.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/__pycache__/__init__.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/__pycache__/test_subcommands_quality_filter.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/__pycache__/test_primer_trim.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/test/test_primer_trim.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/transform.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/__pycache__/__init__.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/__pycache__/transform.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/__pycache__/fileformat.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/fileformat.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/scripts copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/scripts/cli.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/scripts copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/scripts/__init__.py -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/scripts creating /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/scripts/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/scripts/__pycache__/__init__.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/scripts/__pycache__ copying /build/seqmagick-7OJKwr/seqmagick-0.8.4/.pybuild/cpython3_3.9/build/seqmagick/scripts/__pycache__/cli.cpython-39.pyc -> /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/scripts/__pycache__ byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/__init__.py to __init__.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/info.py to info.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/__init__.py to __init__.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/common.py to common.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/convert.py to convert.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/primer_trim.py to primer_trim.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/mogrify.py to mogrify.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/quality_filter.py to quality_filter.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/extract_ids.py to extract_ids.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/subcommands/backtrans_align.py to backtrans_align.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/__init__.py to __init__.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/test_subcommands_backtrans_align.py to test_subcommands_backtrans_align.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/test_subcommands_quality_filter.py to test_subcommands_quality_filter.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/test_transform.py to test_transform.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/test_convert.py to test_convert.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/test_extract_ids.py to test_extract_ids.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/__init__.py to __init__.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/test_mogrify.py to test_mogrify.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/data/__init__.py to __init__.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/integration/test_info.py to test_info.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/test_subcommands_common.py to test_subcommands_common.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/test_subcommands_convert.py to test_subcommands_convert.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/test/test_primer_trim.py to test_primer_trim.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/transform.py to transform.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/fileformat.py to fileformat.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/scripts/cli.py to cli.cpython-39.pyc byte-compiling /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick/scripts/__init__.py to __init__.cpython-39.pyc running install_egg_info running egg_info creating seqmagick.egg-info writing seqmagick.egg-info/PKG-INFO writing dependency_links to seqmagick.egg-info/dependency_links.txt writing entry points to seqmagick.egg-info/entry_points.txt writing requirements to seqmagick.egg-info/requires.txt writing top-level names to seqmagick.egg-info/top_level.txt writing manifest file 'seqmagick.egg-info/SOURCES.txt' reading manifest file 'seqmagick.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.git*' found anywhere in distribution warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files matching '*.png' found anywhere in distribution writing manifest file 'seqmagick.egg-info/SOURCES.txt' Copying seqmagick.egg-info to /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/lib/python3.9/dist-packages/seqmagick-0.0.0.egg-info Skipping SOURCES.txt running install_scripts Installing seqmagick script to /build/seqmagick-7OJKwr/seqmagick-0.8.4/debian/seqmagick/usr/bin dh_installdocs -i -O--buildsystem=pybuild dh_installchangelogs -i -O--buildsystem=pybuild dh_installman -i -O--buildsystem=pybuild dh_python3 -i -O--buildsystem=pybuild dh_installsystemduser -i -O--buildsystem=pybuild dh_perl -i -O--buildsystem=pybuild dh_link -i -O--buildsystem=pybuild dh_strip_nondeterminism -i -O--buildsystem=pybuild dh_compress -i -O--buildsystem=pybuild dh_fixperms -i -O--buildsystem=pybuild dh_missing -i -O--buildsystem=pybuild dh_installdeb -i -O--buildsystem=pybuild dh_gencontrol -i -O--buildsystem=pybuild dh_md5sums -i -O--buildsystem=pybuild dh_builddeb -i -O--buildsystem=pybuild dpkg-deb: building package 'seqmagick' in '../seqmagick_0.8.4-1_all.deb'. dpkg-genbuildinfo --build=all dpkg-genchanges --build=all >../seqmagick_0.8.4-1_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/seqmagick-7OJKwr /tmp/seqmagick-0.8.4-1z8qbiw6m I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.kwSd3u_8N1... I: success in 537.0112 seconds md5: seqmagick_0.8.4-1_all.deb: OK sha1: seqmagick_0.8.4-1_all.deb: OK sha256: seqmagick_0.8.4-1_all.deb: OK Checksums: OK