Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/s/sepp/sepp_4.3.10+dfsg-5_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/sepp-4.3.10+dfsg-50mvjhsm0/sepp_4.3.10+dfsg-5_amd64.buildinfo Get source package info: sepp=4.3.10+dfsg-5 Source URL: http://snapshot.notset.fr/mr/package/sepp/4.3.10+dfsg-5/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=ant=1.10.9-1 autoconf=2.69-13 automake=1:1.16.3-1 autopoint=0.21-3 autotools-dev=20180224.1+nmu1 base-files=11 base-passwd=3.5.48 bash=5.1-1 binutils=2.35.1-6 binutils-common=2.35.1-6 binutils-x86-64-linux-gnu=2.35.1-6 bsdextrautils=2.36.1-3 bsdutils=1:2.36.1-3 build-essential=12.8 bzip2=1.0.8-4 ca-certificates=20200601 ca-certificates-java=20190909 coreutils=8.32-4+b1 cpp=4:10.2.0-1 cpp-10=10.2.1-1 dash=0.5.11+git20200708+dd9ef66-5 debconf=1.5.74 debhelper=13.3 debianutils=4.11.2 default-jre-headless=2:1.11-72 dh-autoreconf=19 dh-python=4.20201102 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13+20201015-2 file=1:5.39-3 findutils=4.7.0+git20201010-2 fontconfig-config=2.13.1-4.2 fonts-dejavu-core=2.37-2 g++=4:10.2.0-1 g++-10=10.2.1-1 gcc=4:10.2.0-1 gcc-10=10.2.1-1 gcc-10-base=10.2.1-1 gettext=0.21-3 gettext-base=0.21-3 grep=3.6-1 groff-base=1.22.4-5 gzip=1.10-2 hmmer=3.3+dfsg2-1 hostname=3.23 init-system-helpers=1.60 intltool-debian=0.35.0+20060710.5 java-common=0.72 libacl1=2.2.53-8 libapache-pom-java=18-1 libarchive-zip-perl=1.68-1 libasan6=10.2.1-1 libasound2=1.2.4-1 libasound2-data=1.2.4-1 libatomic1=10.2.1-1 libattr1=1:2.4.48-5 libaudit-common=1:3.0-1 libaudit1=1:3.0-1 libavahi-client3=0.8-3 libavahi-common-data=0.8-3 libavahi-common3=0.8-3 libbinutils=2.35.1-6 libblkid1=2.36.1-3 libbrotli1=1.0.9-2+b2 libbsd0=0.10.0-1 libbz2-1.0=1.0.8-4 libc-bin=2.31-6 libc-dev-bin=2.31-6 libc6=2.31-6 libc6-dev=2.31-6 libcap-ng0=0.7.9-2.2+b1 libcc1-0=10.2.1-1 libcom-err2=1.45.6-1 libcommons-beanutils-java=1.9.4-1 libcommons-collections3-java=3.2.2-2 libcommons-lang-java=2.6-9 libcommons-logging-java=1.2-2 libcommons-parent-java=43-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.1-6 libctf0=2.35.1-6 libcups2=2.3.3op1-4 libdb5.3=5.3.28+dfsg1-0.6 libdbus-1-3=1.12.20-1 libdebconfclient0=0.255 libdebhelper-perl=13.3 libdivsufsort3=2.0.1-5 libdpkg-perl=1.20.5 libelf1=0.182-1 libexpat1=2.2.10-1 libezmorph-java=1.0.6-3 libffi7=3.3-5 libfile-stripnondeterminism-perl=1.9.0-1 libfontconfig1=2.13.1-4.2 libfreetype6=2.10.4+dfsg-1 libgcc-10-dev=10.2.1-1 libgcc-s1=10.2.1-1 libgcrypt20=1.8.7-2 libgdbm-compat4=1.18.1-5.1 libgdbm6=1.18.1-5.1 libgmp10=2:6.2.1+dfsg-1 libgnutls30=3.7.0-3 libgomp1=10.2.1-1 libgoogle-gson-java=2.8.6-1 libgpg-error0=1.38-2 libgsl25=2.6+dfsg-2 libgslcblas0=2.6+dfsg-2 libgssapi-krb5-2=1.18.3-4 libhogweed6=3.6-2 libicu67=67.1-5 libidn2-0=2.3.0-4 libisl23=0.23-1 libitm1=10.2.1-1 libjenkins-json-java=2.4-jenkins-3-5 libjpeg62-turbo=1:2.0.5-1.1 libk5crypto3=1.18.3-4 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-4 libkrb5support0=1.18.3-4 liblcms2-2=2.9-4+b1 liblmdb0=0.9.24-1 liblsan0=10.2.1-1 liblz4-1=1.9.3-1 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.39-3 libmagic1=1:5.39-3 libmbedcrypto3=2.16.5-1 libmbedtls12=2.16.5-1 libmbedx509-0=2.16.5-1 libmount1=2.36.1-3 libmpc3=1.2.0-1 libmpfr6=4.1.0-3 libncursesw6=6.2+20201114-1 libnettle8=3.6-2 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libnspr4=2:4.29-1 libnss3=2:3.60-1 libp11-kit0=0.23.22-1 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpcre2-8-0=10.36-2 libpcre3=2:8.39-13 libpcsclite1=1.9.0-1 libperl5.32=5.32.0-6 libpipeline1=1.5.3-1 libpng16-16=1.6.37-3 libpython3-stdlib=3.9.1-1 libpython3.9-minimal=3.9.1-1 libpython3.9-stdlib=3.9.1-1 libquadmath0=10.2.1-1 libreadline8=8.1-1 libseccomp2=2.5.1-1 libselinux1=3.1-2+b2 libsigsegv2=2.12-3 libsmartcols1=2.36.1-3 libsqlite3-0=3.34.0-1 libssl1.1=1.1.1i-1 libstdc++-10-dev=10.2.1-1 libstdc++6=10.2.1-1 libsub-override-perl=0.09-2 libsystemd0=247.2-2 libtasn1-6=4.16.0-2 libtinfo6=6.2+20201114-1 libtirpc-common=1.2.6-3 libtirpc-dev=1.2.6-3 libtirpc3=1.2.6-3 libtool=2.4.6-14 libtsan0=10.2.1-1 libubsan1=10.2.1-1 libuchardet0=0.0.7-1 libudev1=247.2-2 libunistring2=0.9.10-4 libuuid1=2.36.1-3 libx11-6=2:1.6.12-1 libx11-data=2:1.6.12-1 libxau6=1:1.0.8-1+b2 libxcb1=1.14-2 libxdmcp6=1:1.1.2-3 libxext6=2:1.3.3-1.1 libxi6=2:1.7.10-1 libxml2=2.9.10+dfsg-6.3+b1 libxrender1=1:0.9.10-1 libxtst6=2:1.2.3-1 libzstd1=1.4.5+dfsg-4 linux-libc-dev=5.9.15-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 mailcap=3.67 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 media-types=1.0.1 mime-support=3.66 ncbi-blast+=2.10.1+ds-1 ncbi-data=6.1.20170106+dfsg1-9 ncurses-base=6.2+20201114-1 ncurses-bin=6.2+20201114-1 openjdk-11-jre-headless=11.0.9.1+1-1 openssl=1.1.1i-1 patch=2.7.6-6 perl=5.32.0-6 perl-base=5.32.0-6 perl-modules-5.32=5.32.0-6 po-debconf=1.0.21 pplacer=1.1~alpha19-4 python3=3.9.1-1 python3-dendropy=4.5.1-1 python3-distutils=3.9.1-1 python3-lib2to3=3.9.1-1 python3-minimal=3.9.1-1 python3-pkg-resources=51.1.0-1 python3-setuptools=51.1.0-1 python3.9=3.9.1-1 python3.9-minimal=3.9.1-1 readline-common=8.1-1 sed=4.7-1 sensible-utils=0.0.12+nmu1 sysvinit-utils=2.96-5 tar=1.32+dfsg-1 tzdata=2020e-1 ucf=3.0043 util-linux=2.36.1-3 x11-common=1:7.7+21 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201224T143033Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d sepp=4.3.10+dfsg-5 && mkdir -p /build/sepp-mioLzI && dpkg-source --no-check -x /*.dsc /build/sepp-mioLzI/sepp-4.3.10+dfsg && chown -R builduser:builduser /build/sepp-mioLzI" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/sepp-mioLzI/sepp-4.3.10+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1608822691" dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/sepp-mioLzI /tmp/sepp-4.3.10+dfsg-50mvjhsm0 bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20201224T143033Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.AkVNGw4c1Y as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.AkVNGw4c1Y Reading package lists... Building dependency tree... util-linux is already the newest version (2.36.1-3). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20201224T143033Z unstable/main amd64 libfakeroot amd64 1.25.3-1.1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20201224T143033Z unstable/main amd64 fakeroot amd64 1.25.3-1.1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (783 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4619 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1.1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1.1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1.1_amd64.deb ... Unpacking fakeroot (1.25.3-1.1) ... Setting up libfakeroot:amd64 (1.25.3-1.1) ... Setting up fakeroot (1.25.3-1.1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-6) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201224T143033Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.AkVNGw4c1Y Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20201224T143033Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 22s (1027 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.AkVNGw4c1Y I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d sepp=4.3.10+dfsg-5 && mkdir -p /build/sepp-mioLzI && dpkg-source --no-check -x /*.dsc /build/sepp-mioLzI/sepp-4.3.10+dfsg && chown -R builduser:builduser /build/sepp-mioLzI"' exec /tmp/mmdebstrap.AkVNGw4c1Y Reading package lists... NOTICE: 'sepp' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/sepp.git Please use: git clone https://salsa.debian.org/med-team/sepp.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 4305 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main sepp 4.3.10+dfsg-5 (dsc) [2139 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main sepp 4.3.10+dfsg-5 (tar) [4288 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main sepp 4.3.10+dfsg-5 (diff) [14.5 kB] Fetched 4305 kB in 3s (1233 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'sepp_4.3.10+dfsg-5.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting sepp in /build/sepp-mioLzI/sepp-4.3.10+dfsg dpkg-source: info: unpacking sepp_4.3.10+dfsg.orig.tar.xz dpkg-source: info: unpacking sepp_4.3.10+dfsg-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying setup.patch dpkg-source: info: applying use_debian_packaged_guppy_from_pplacer.patch dpkg-source: info: applying change_java_version_for_ant.patch dpkg-source: info: applying json_collections.patch dpkg-source: info: applying java_build.patch dpkg-source: info: applying configuration_files_in_etc_and_per_user.patch dpkg-source: info: applying looking_for_integer_in_placements.patch dpkg-source: info: applying deactivating_log_test.patch dpkg-source: info: applying make_split_sequences_script.patch dpkg-source: info: applying using_python3_interpreter.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/sepp-mioLzI/sepp-4.3.10+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1608822691" dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.AkVNGw4c1Y dpkg-buildpackage: info: source package sepp dpkg-buildpackage: info: source version 4.3.10+dfsg-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' dh_auto_clean I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it rm -f -rf tools/bundled rm -f -rf tools/merge/build rm -f sepp.config tipp.config upp.config find . -name "*.class" -delete find . -name "*.jar" -delete rm -f home.path sepp.egg-info/PKG-INFO sepp.egg-info/SOURCES.txt sepp.egg-info/dependency_links.txt sepp.egg-info/requires.txt sepp.egg-info/top_level.txt make[1]: Leaving directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --with python3 --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild debian/rules override_dh_auto_configure make[1]: Entering directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' mkdir -p tools/bundled/Linux mkdir -p tools/merge/lib # Building the jars for sepp first, tipp then. cd tools/merge && \ CLASSPATH=/usr/share/java/jenkins-json-lib.jar:/usr/share/java/gson.jar ant && \ CLASSPATH=/usr/share/java/jenkins-json-lib.jar:/usr/share/java/gson.jar ant -f tipp.xml Buildfile: /build/sepp-mioLzI/sepp-4.3.10+dfsg/tools/merge/build.xml clean: compile: [mkdir] Created dir: /build/sepp-mioLzI/sepp-4.3.10+dfsg/tools/merge/classes [javac] /build/sepp-mioLzI/sepp-4.3.10+dfsg/tools/merge/build.xml:32: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds [javac] Compiling 23 source files to /build/sepp-mioLzI/sepp-4.3.10+dfsg/tools/merge/classes [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] /build/sepp-mioLzI/sepp-4.3.10+dfsg/tools/merge/src/edu/rice/cs/bioinfo/programs/phylonet/structs/tree/util/Trees.java:32: warning: SunGraphicsEnvironment is internal proprietary API and may be removed in a future release [javac] import sun.java2d.SunGraphicsEnvironment; [javac] ^ [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 2 warnings jar: [jar] Building jar: /build/sepp-mioLzI/sepp-4.3.10+dfsg/tools/merge/seppJsonMerger.jar BUILD SUCCESSFUL Total time: 31 seconds Buildfile: /build/sepp-mioLzI/sepp-4.3.10+dfsg/tools/merge/tipp.xml clean: compile: [javac] /build/sepp-mioLzI/sepp-4.3.10+dfsg/tools/merge/tipp.xml:32: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds jar: [jar] Building jar: /build/sepp-mioLzI/sepp-4.3.10+dfsg/tools/merge/tippJsonMerger.jar BUILD SUCCESSFUL Total time: 2 seconds # dh_auto_configure only calls the config for sepp, we need it for tipp and # upp as well. pybuild --configure --configure-args "tipp upp" I: pybuild base:232: python3.9 setup.py config tipp upp running config Creating main sepp config file at /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/.sepp/main.config and tools at /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/.sepp running tipp Creating main TIPP config file at /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/.sepp/tipp.config and tools at /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/.sepp Warning! REFERENCE variable is not defined. If you plan to run TIPP for abundance profiling, then have REFERENCE pointed to Reference directory. You can also change your config to point to the Reference directory by including the following line in your config: [reference] path=/location/of/reference_directory/ running upp Creating main UPP config file at /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/.sepp/upp.config and tools at /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/.sepp make[1]: Leaving directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' debian/rules override_dh_auto_build make[1]: Entering directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' dh_auto_build I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py creating /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/__init__.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/exhaustive_tipp.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/exhaustive.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/jobs.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/alignment.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/ensemble.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/decompose_tree.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/exhaustive_upp.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/problem.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/checkpointing.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/math_utils.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/tree.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/scheduler.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/algorithm.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/filemgr.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/config.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/metagenomics.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp copying sepp/scratch.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp running build_scripts creating build creating build/scripts-3.9 copying and adjusting run_sepp.py -> build/scripts-3.9 copying and adjusting run_tipp.py -> build/scripts-3.9 copying and adjusting run_upp.py -> build/scripts-3.9 copying and adjusting run_abundance.py -> build/scripts-3.9 copying and adjusting split_sequences.py -> build/scripts-3.9 copying and adjusting run_tipp_tool.py -> build/scripts-3.9 changing mode of build/scripts-3.9/run_sepp.py from 644 to 755 changing mode of build/scripts-3.9/run_tipp.py from 644 to 755 changing mode of build/scripts-3.9/run_upp.py from 644 to 755 changing mode of build/scripts-3.9/run_abundance.py from 644 to 755 changing mode of build/scripts-3.9/split_sequences.py from 644 to 755 changing mode of build/scripts-3.9/run_tipp_tool.py from 644 to 755 # Preparing a conffile with Debian paths for sepp. sed 's,path=.*\(pplacer\)$,path=/usr/bin/\1,' `find . -name main.config` | \ sed 's,path=.*\(hmm[a-z]*\)$,path=/usr/bin/\1,' | \ sed 's,path=.*\(seppJsonMerger.jar\)$,path=/usr/share/sepp/\1,' > sepp.config # Preparing a conffile with Debian paths for tipp. sed 's,path=.*\(pplacer\)$,path=/usr/bin/\1,' `find . -name tipp.config` | \ sed 's,path=.*\(hmm[a-z]*\)$,path=/usr/bin/\1,' | \ sed 's,path=.*\(tippJsonMerger.jar\)$,path=/usr/share/sepp/\1,' > tipp.config # Preparing a conffile with Debian paths for upp. sed 's,path=.*\(pplacer\)$,path=/usr/bin/\1,' `find . -name upp.config` | \ sed 's,path=.*\(hmm[a-z]*\)$,path=/usr/bin/\1,' | \ sed 's,path=.*\(seppJsonMerger.jar\)$,path=/usr/share/sepp/\1,' > upp.config make[1]: Leaving directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' ORIGIN_FOLDER=`pwd` && \ TEST_FOLDER=`mktemp -d` && \ cp -r test/ $TEST_FOLDER && \ cd $TEST_FOLDER && \ mkdir sepp/ && \ for F in $(ls $ORIGIN_FOLDER/sepp/*.py); do \ sed "s,/etc/sepp,$TEST_FOLDER," $F > sepp/${F##*/}; \ done && \ for F in $(ls $ORIGIN_FOLDER/*.config); do \ sed "s,/usr/share/sepp,$ORIGIN_FOLDER/tools/merge," $F > ${F##*/}; \ done && \ cd test/unittest/ && \ sed "s,\".*\.jar\",\"$ORIGIN_FOLDER/tools/merge/seppJsonMerger.jar\"," testMerge.py > testMergeCp.py && \ mv testMergeCp.py testMerge.py && \ PYTHONPATH=$PYTHONPATH:../../ python3 -m unittest discover -v testAlignmentReadFasta (testAlignment.Test) ... /tmp/tmp.0KK4bnmz77/sepp/alignment.py:293: DeprecationWarning: 'U' mode is deprecated file_obj = open(filename, 'rU') /tmp/tmp.0KK4bnmz77/test/unittest/testAlignment.py:38: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/mock/pyrg/sate.fasta' mode='rU' encoding='UTF-8'> alg.read_filepath(get_data_path("mock/pyrg/sate.fasta")) ResourceWarning: Enable tracemalloc to get the object allocation traceback ok testExtendedAlignment (testAlignment.Test) ... /tmp/tmp.0KK4bnmz77/test/unittest/testAlignment.py:107: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/simulated/test.fasta' mode='rU' encoding='UTF-8'> alg.read_filepath(get_data_path("simulated/test.fasta")) ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testAlignment.py:112: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/simulated/test.fas' mode='rU' encoding='UTF-8'> frg.read_filepath(get_data_path("simulated/test.fas")) ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testAlignment.py:130: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpmjrnivj4' mode='rU' encoding='UTF-8'> tmp = MutableAlignment().read_filepath(self.fp_dummy1) ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testAlignment.py:133: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp2yiod8cb' mode='rU' encoding='UTF-8'> tmp = MutableAlignment().read_filepath(self.fp_dummy2) ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpmjrnivj4' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:574: DeprecationWarning: 'U' mode is deprecated handle = open(path, 'rU') /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/tmp/cp1.extended.sto' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:41:13] alignment.py (line 556): INFO: Merging extension sto file (/tmp/tmp.0KK4bnmz77/test/unittest/data/tmp/cp1.extended.sto) into base alignment (/tmp/tmpmjrnivj4). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp2yiod8cb' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/tmp/cp2.extended.sto' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:41:13] alignment.py (line 556): INFO: Merging extension sto file (/tmp/tmp.0KK4bnmz77/test/unittest/data/tmp/cp2.extended.sto) into base alignment (/tmp/tmp2yiod8cb). ok testReadOnlySubAlignment (testAlignment.Test) ... /tmp/tmp.0KK4bnmz77/test/unittest/testAlignment.py:46: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/mock/pyrg/sate.fasta' mode='rU' encoding='UTF-8'> alg.read_filepath(get_data_path("mock/pyrg/sate.fasta")) ResourceWarning: Enable tracemalloc to get the object allocation traceback ok test_make_checkpoints (testCheckPoint.Test) ... /tmp/tmp.0KK4bnmz77/sepp/config.py:66: DeprecationWarning: This method will be removed in future versions. Use 'parser.read_file()' instead. cparser.readfp(filename) /tmp/tmp.0KK4bnmz77/sepp/config.py:323: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/sepp.config' mode='r' encoding='UTF-8'> main_cmd_defaults = _read_config_file( ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:41:14] config.py (line 350): INFO: Seed number: 297834 [01:41:14] algorithm.py (line 258): INFO: Reading input alignment: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> [01:41:14] algorithm.py (line 265): INFO: Reading input tree: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> [01:41:14] algorithm.py (line 238): INFO: Decomposition Sizes are set to alignment: 20 placement: 20 [01:41:14] exhaustive.py (line 350): INFO: Breaking into 33 placement subsets. [01:41:14] exhaustive.py (line 397): INFO: Breaking into 33 alignment subsets. [01:41:14] filemgr.py (line 129): INFO: Root temp directory built: /tmp/sepp/output.zsliazi_ [01:41:14] exhaustive.py (line 412): INFO: Breaking each alignment subset into 32 fragment chunks. [01:41:17] checkpointing.py (line 121): INFO: Checkpoint every 5 seconds [01:41:17] checkpointing.py (line 49): INFO: Checkpoint is being updated: /tmp/sepp/output.zsliazi_/checkpoints/dumpzwqvd95r /tmp/tmp.0KK4bnmz77/sepp/checkpointing.py:50: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpnub8d8bz' mode='r' encoding='UTF-8'> oldTmpFile = open(checkpoint_manager.checkpoint_path).readlines() ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:41:33] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.rlmkgk99.fasta [01:41:36] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.4zxe_l2o.fasta [01:41:37] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.wca2ppli.fasta [01:41:38] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.wme06_b7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_0/hmmsearch.results.vigtvuej [01:41:38] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.rzrww2gr.fasta [01:41:38] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.kwjxl0ta.fasta [01:41:39] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input.vs379w6e.fasta [01:41:39] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.input.a7hyuvuh.fasta [01:41:39] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.input.x3m3h8bu.fasta [01:41:39] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.d0nkcwk2.fasta [01:41:39] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.input.wbtoj79s.fasta [01:41:39] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.djyj7h7q.fasta [01:41:39] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.input.9ou1_jma.fasta [01:41:39] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.input.15n2uwap.fasta [01:41:39] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.2f8mbxp7.fasta [01:41:39] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.input.u6gievs0.fasta [01:41:39] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.wme06_b7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_1/hmmsearch.results.201ksi26 [01:41:39] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.wme06_b7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_2/hmmsearch.results.wxfn4eoc [01:41:40] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.input.97p1b8ee.fasta [01:41:40] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.wme06_b7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_7/hmmsearch.results.zehh0iro [01:41:40] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.wme06_b7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_3/hmmsearch.results.yxucd3af [01:41:40] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.wme06_b7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_6/hmmsearch.results.12qwjbye [01:41:40] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.8d0nw4de.fasta [01:41:40] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.wme06_b7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_8/hmmsearch.results.kalo5tvw [01:41:40] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.hatnma_n.fasta [01:41:40] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.wme06_b7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_5/hmmsearch.results.fec04ttn [01:41:40] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.wme06_b7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_4/hmmsearch.results.yhv35dlk [01:41:41] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.v_5l_tu4, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_1/hmmsearch.results.7fb18f29 [01:41:41] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.orqulqkr.fasta [01:41:41] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.v_5l_tu4, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_2/hmmsearch.results.tpfu38ah [01:41:41] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.v_5l_tu4, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_4/hmmsearch.results.4smxpzrp [01:41:41] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.7cdci2ul, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_1/hmmsearch.results.qp9mrwfe [01:41:41] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.wme06_b7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_9/hmmsearch.results.dn1oupwo [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.v_5l_tu4, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_3/hmmsearch.results.g36fzdho [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.v_5l_tu4, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_8/hmmsearch.results.4xu7xdi0 [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.7cdci2ul, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_0/hmmsearch.results.7nr1dnhe [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.7cdci2ul, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_7/hmmsearch.results.bk95c7uv [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.v_5l_tu4, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_0/hmmsearch.results.gb5kdvjs [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.v_5l_tu4, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_7/hmmsearch.results.48bi_5zc [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.7cdci2ul, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_6/hmmsearch.results.swybk5kg [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.v_5l_tu4, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_6/hmmsearch.results.ek7r0hcy [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.7cdci2ul, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_8/hmmsearch.results.h652p9b4 [01:41:42] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.input.00aze_ro.fasta [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.v_5l_tu4, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_9/hmmsearch.results.ymzo5r9_ [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.7cdci2ul, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_2/hmmsearch.results.hh9snkqe [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.7cdci2ul, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_3/hmmsearch.results.sqtb1rjx [01:41:42] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.v_5l_tu4, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_5/hmmsearch.results.9sxwgfuh [01:41:43] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.f_bh4a96, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_2/hmmsearch.results.qi4ql_gu [01:41:43] checkpointing.py (line 68): INFO: Checkpoint Saved to: /tmp/sepp/output.zsliazi_/checkpoints/dumpzwqvd95r and linked in /tmp/tmpnub8d8bz. [01:41:43] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.7cdci2ul, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_5/hmmsearch.results.ervurpbe [01:41:43] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.f_bh4a96, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_4/hmmsearch.results._ck0zfhd [01:41:44] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.input.zmj0xqeq.fasta [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.7cdci2ul, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_9/hmmsearch.results.ierotnlq [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.f_bh4a96, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_5/hmmsearch.results.1v_7jxzh [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.gu8z7lhe, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_0/hmmsearch.results.560baxew [01:41:44] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.input.s8y7nhjf.fasta [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.7cdci2ul, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_4/hmmsearch.results.t2ho8nuo [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.f_bh4a96, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmsearch.results.f_sbgt_6 [01:41:44] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.input.y9fl8_9e.fasta [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.f_bh4a96, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_8/hmmsearch.results.v7itq_de [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.f_bh4a96, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_3/hmmsearch.results.zvewsx7r [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.f_bh4a96, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_6/hmmsearch.results.gnm20w8d [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.f_bh4a96, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_1/hmmsearch.results.a0y7x8k_ [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.gu8z7lhe, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_6/hmmsearch.results.i3tk9577 [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.gu8z7lhe, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_2/hmmsearch.results.hmk6y9jh [01:41:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.f_bh4a96, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_9/hmmsearch.results.av986jbg [01:41:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.gu8z7lhe, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_4/hmmsearch.results.v33jdunu [01:41:45] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.p53lercv.fasta [01:41:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.f_bh4a96, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_7/hmmsearch.results.m9gv6dn4 [01:41:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.gu8z7lhe, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_3/hmmsearch.results.usqhddxl [01:41:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.gu8z7lhe, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_1/hmmsearch.results.98xndymc [01:41:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.gu8z7lhe, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_5/hmmsearch.results.at9uo04a [01:41:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.gu8z7lhe, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_8/hmmsearch.results.fklw2nqd [01:41:45] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.input.mdik76_0.fasta [01:41:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.8_hvuxvm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/FC_16_0_4/hmmsearch.results.bxup_g4m [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.8_hvuxvm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/FC_16_0_0/hmmsearch.results.kh8ri6zq [01:41:46] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.input.j12_jjp0.fasta [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.gu8z7lhe, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_7/hmmsearch.results.6ykyi3vs [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.8_hvuxvm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/FC_16_0_2/hmmsearch.results.i3f2pgbk [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.model.3j5e4c4w, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/FC_22_0_1/hmmsearch.results.58dv6kor [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.model.3j5e4c4w, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/FC_22_0_5/hmmsearch.results.gptg47h8 [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.gu8z7lhe, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_9/hmmsearch.results.yi_84fbe [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.8_hvuxvm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/FC_16_0_3/hmmsearch.results.1dki4is_ [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.8_hvuxvm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/FC_16_0_6/hmmsearch.results.0xypsydo [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.model.3j5e4c4w, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/FC_22_0_6/hmmsearch.results.su6uc3wg [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.8_hvuxvm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/FC_16_0_5/hmmsearch.results.f1189o8g [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.model.3j5e4c4w, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/FC_22_0_7/hmmsearch.results._bc67jgl [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.8_hvuxvm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/FC_16_0_1/hmmsearch.results.6qbhbilj [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.model.3j5e4c4w, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/FC_22_0_8/hmmsearch.results.3p_7fzbw [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.8_hvuxvm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/FC_16_0_8/hmmsearch.results.69bmbedu [01:41:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.8_hvuxvm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/FC_16_0_9/hmmsearch.results.73peyl47 [01:41:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.model.3j5e4c4w, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/FC_22_0_2/hmmsearch.results.342k0jyu [01:41:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.model.3j5e4c4w, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/FC_22_0_3/hmmsearch.results.m2t611ix [01:41:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.model.3j5e4c4w, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/FC_22_0_0/hmmsearch.results.902adn5o [01:41:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.model.3j5e4c4w, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/FC_22_0_9/hmmsearch.results.dkgc71jh [01:41:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.8_hvuxvm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/FC_16_0_7/hmmsearch.results.qffn63j3 [01:41:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.model.3j5e4c4w, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/FC_22_0_4/hmmsearch.results.01eeixcc [01:41:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.model.pook9mt1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/FC_20_0_7/hmmsearch.results.w1rbg4ut [01:41:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.model.pook9mt1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/FC_20_0_2/hmmsearch.results.hg2zggr7 [01:41:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.model.pook9mt1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/FC_20_0_3/hmmsearch.results.l32eyyu5 [01:41:48] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.69yjemm_.fasta [01:41:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.model.pook9mt1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/FC_20_0_9/hmmsearch.results.duqtsyx8 [01:41:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.model.pook9mt1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/FC_20_0_5/hmmsearch.results.tw6d3r6s [01:41:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_3/hmmsearch.results.oeleo6_7 [01:41:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.model.pook9mt1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/FC_20_0_0/hmmsearch.results.o264d9cv [01:41:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_6/hmmsearch.results.to8vnezz [01:41:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_4/hmmsearch.results.4gvd41la [01:41:49] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.input.zl7xa28g.fasta [01:41:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.model.pook9mt1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/FC_20_0_6/hmmsearch.results.0pf0to7_ [01:41:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_2/hmmsearch.results.wmwwl0ei [01:41:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_9/hmmsearch.results.nlf7yud6 [01:41:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_0/hmmsearch.results.45swnnil [01:41:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_1/hmmsearch.results.f6lnjjxh [01:41:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.model.pook9mt1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/FC_20_0_4/hmmsearch.results.4g7nqki_ [01:41:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.model.pook9mt1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/FC_20_0_8/hmmsearch.results.epi9hczg [01:41:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_8/hmmsearch.results.3lvaxyd6 [01:41:49] checkpointing.py (line 49): INFO: Checkpoint is being updated: /tmp/sepp/output.zsliazi_/checkpoints/dump76g53klp [01:41:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.model.pook9mt1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/FC_20_0_1/hmmsearch.results.sqbhijev [01:41:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_7/hmmsearch.results.k_r64nns [01:41:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_5/hmmsearch.results.a3fh8jrv [01:41:50] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input.gf8j5kf2.fasta [01:41:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.model.ol59x8g6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/FC_29_0_5/hmmsearch.results.by9yg6na [01:41:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.model.ol59x8g6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/FC_29_0_8/hmmsearch.results.qcussawy [01:41:50] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.input.hl920856.fasta [01:41:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.model.ol59x8g6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/FC_29_0_1/hmmsearch.results.e5x319ih [01:41:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.mrsouiby, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_0/hmmsearch.results.8h52i0r5 [01:41:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.model.ol59x8g6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/FC_29_0_4/hmmsearch.results.f2plo7l4 [01:41:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.model.ol59x8g6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/FC_29_0_3/hmmsearch.results.ksmqdldi [01:41:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.7ryb18ao, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/FC_17_0_5/hmmsearch.results.lk2ki15j [01:41:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.mrsouiby, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_5/hmmsearch.results.uzkrt2s0 [01:41:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.model.ol59x8g6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/FC_29_0_7/hmmsearch.results.9lt8oyrf [01:41:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.model.ol59x8g6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/FC_29_0_6/hmmsearch.results.1gdzf8xr [01:41:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.model.ol59x8g6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/FC_29_0_0/hmmsearch.results.ib4g57j3 [01:41:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.mrsouiby, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_1/hmmsearch.results.245sm1xx [01:41:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.mrsouiby, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_3/hmmsearch.results.xqznzo0p [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.7ryb18ao, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/FC_17_0_7/hmmsearch.results.1qgnnte4 [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.mrsouiby, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_2/hmmsearch.results.e4el6zaw [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.model.ol59x8g6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/FC_29_0_2/hmmsearch.results.6z5f9gnj [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.7ryb18ao, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/FC_17_0_4/hmmsearch.results.xrx63beh [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.mrsouiby, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_6/hmmsearch.results.az23d_ro [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.model.ol59x8g6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/FC_29_0_9/hmmsearch.results.7qx5elhe [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.7ryb18ao, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/FC_17_0_3/hmmsearch.results.9eiaoifb [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.model.kma85oz_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/FC_28_0_0/hmmsearch.results.tr3p5m9d [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.mrsouiby, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_4/hmmsearch.results.pe5wlxmq [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.7ryb18ao, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/FC_17_0_0/hmmsearch.results.g9fl285h [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.7ryb18ao, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/FC_17_0_6/hmmsearch.results.qo08p4o5 [01:41:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.mrsouiby, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_9/hmmsearch.results.lztfwyie [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.7ryb18ao, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/FC_17_0_9/hmmsearch.results.z2dssm_a [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.model.kma85oz_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/FC_28_0_5/hmmsearch.results.alni9xl5 [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.model.kma85oz_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/FC_28_0_3/hmmsearch.results.onr86ggb [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.7ryb18ao, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/FC_17_0_1/hmmsearch.results.38omnc3x [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.model.kma85oz_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/FC_28_0_1/hmmsearch.results.9jdlfygk [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.model.kma85oz_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/FC_28_0_2/hmmsearch.results.fif520wg [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.model.kma85oz_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/FC_28_0_8/hmmsearch.results.zfe3ugdl [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.7ryb18ao, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/FC_17_0_2/hmmsearch.results.rrfrsg9q [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.model.kma85oz_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/FC_28_0_7/hmmsearch.results.7lqvi5k5 [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.model.kma85oz_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/FC_28_0_4/hmmsearch.results.64ul6pyl [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.7ryb18ao, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/FC_17_0_8/hmmsearch.results.3b_uef5n [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0j8arqqr, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_5/hmmsearch.results.nasa3t3p [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.mrsouiby, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_7/hmmsearch.results.7s7t1jts [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.mrsouiby, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_8/hmmsearch.results.qdw10tl5 [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.model.kma85oz_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/FC_28_0_6/hmmsearch.results.iyzsxtff [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0j8arqqr, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_9/hmmsearch.results.3od714gb [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0j8arqqr, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_4/hmmsearch.results.kexryb2w [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0j8arqqr, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_2/hmmsearch.results.0ezlpe4c [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0j8arqqr, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_0/hmmsearch.results.polaxgtb [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0j8arqqr, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_8/hmmsearch.results.781k3gkq [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.model.kma85oz_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/FC_28_0_9/hmmsearch.results.3lzjs5vz [01:41:53] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input.l2up8lhc.fasta [01:41:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0j8arqqr, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_7/hmmsearch.results.mylv54yb [01:41:54] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0j8arqqr, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_6/hmmsearch.results.rigzfiga [01:41:54] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0j8arqqr, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_1/hmmsearch.results.yp7fqyzc [01:41:54] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0j8arqqr, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_3/hmmsearch.results._x_r_s0v [01:41:54] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.input.p027yosr.fasta [01:41:54] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.model._3qmgh9d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/FC_26_0_3/hmmsearch.results.c3dhgwfj [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.model._3qmgh9d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/FC_26_0_1/hmmsearch.results.rg4tjr85 [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.model._3qmgh9d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/FC_26_0_6/hmmsearch.results.aao0ispr [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.2e0z1447, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_2/hmmsearch.results.nw8tino7 [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.model._3qmgh9d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/FC_26_0_9/hmmsearch.results.sos_lmko [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.model.kiqc5mgu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/FC_23_0_6/hmmsearch.results.4jdyk8rl [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.2e0z1447, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_8/hmmsearch.results.8x2f1oie [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.model._3qmgh9d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/FC_26_0_8/hmmsearch.results.we1sqtvc [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.2e0z1447, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_4/hmmsearch.results.1zbrdie9 [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.2e0z1447, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_3/hmmsearch.results.k7qjr76a [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.2e0z1447, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_5/hmmsearch.results.9n6woy_g [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.model.kiqc5mgu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/FC_23_0_5/hmmsearch.results.c14dliop [01:41:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.2e0z1447, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_6/hmmsearch.results.qaug4the [01:41:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.model.kiqc5mgu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/FC_23_0_7/hmmsearch.results.agc3idqo [01:41:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.model.kiqc5mgu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/FC_23_0_3/hmmsearch.results.97qfb1r8 [01:41:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.model.kiqc5mgu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/FC_23_0_8/hmmsearch.results.u3p74iby [01:41:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.model.kiqc5mgu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/FC_23_0_0/hmmsearch.results.ho1fe2ea [01:41:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.model.kiqc5mgu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/FC_23_0_4/hmmsearch.results.b8hsw7f3 [01:41:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fekn0gyg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_0/hmmsearch.results.t7nqp1ia [01:41:56] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.6hlezud0.fasta [01:41:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.2e0z1447, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_7/hmmsearch.results.w6006o2u [01:41:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.model._3qmgh9d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/FC_26_0_4/hmmsearch.results.1bbgvesl [01:41:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.2e0z1447, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_0/hmmsearch.results.gni4l_id [01:41:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.model._3qmgh9d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/FC_26_0_7/hmmsearch.results.qfbwmuae [01:41:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.model.kiqc5mgu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/FC_23_0_1/hmmsearch.results._7uyn9ht [01:41:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.model.kiqc5mgu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/FC_23_0_9/hmmsearch.results.hj9fi6sv [01:41:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.model.kiqc5mgu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/FC_23_0_2/hmmsearch.results.opr1doi1 [01:41:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fekn0gyg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_1/hmmsearch.results.nzinkd6w [01:41:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.model._3qmgh9d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/FC_26_0_0/hmmsearch.results.vhicul6_ [01:41:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.rk14an5t, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/FC_8_0_2/hmmsearch.results.dm86e_wq [01:41:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.2e0z1447, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_1/hmmsearch.results.1n7nc3u8 [01:41:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.model._3qmgh9d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/FC_26_0_2/hmmsearch.results.7byv5sgf [01:41:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.2e0z1447, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_9/hmmsearch.results.nh4c8qso [01:41:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fekn0gyg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_7/hmmsearch.results.wcja4oum [01:41:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fekn0gyg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_5/hmmsearch.results.avh5woia [01:41:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.model._3qmgh9d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/FC_26_0_5/hmmsearch.results.jffzg4d4 [01:41:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fekn0gyg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_9/hmmsearch.results.oktu2wmm [01:41:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fekn0gyg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_8/hmmsearch.results.bi475gdt [01:41:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.rk14an5t, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/FC_8_0_0/hmmsearch.results.4fbgk3q0 [01:41:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fekn0gyg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_3/hmmsearch.results.dkvbxa2_ [01:41:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.model.de9tx3im, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/FC_24_0_2/hmmsearch.results.wqx4_sak [01:41:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fekn0gyg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_6/hmmsearch.results.24p3qgt5 [01:41:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.rk14an5t, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/FC_8_0_8/hmmsearch.results.jq5yynu9 [01:41:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.rk14an5t, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/FC_8_0_3/hmmsearch.results.woel7csn [01:41:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.rk14an5t, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/FC_8_0_9/hmmsearch.results.abzwgavv [01:41:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fekn0gyg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_4/hmmsearch.results.az790yfr [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.model.de9tx3im, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/FC_24_0_1/hmmsearch.results.v1r09i78 [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.model.de9tx3im, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/FC_24_0_0/hmmsearch.results.2gjvx_4m [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.model.de9tx3im, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/FC_24_0_6/hmmsearch.results.fzhf1cpg [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.rk14an5t, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/FC_8_0_6/hmmsearch.results.zcnmx7ad [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.rk14an5t, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/FC_8_0_4/hmmsearch.results.5xjcu3bf [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.rk14an5t, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/FC_8_0_1/hmmsearch.results.u6w9964r [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.model.de9tx3im, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/FC_24_0_4/hmmsearch.results.tn4uz9wy [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fekn0gyg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_2/hmmsearch.results.ve0jhgcp [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.model.de9tx3im, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/FC_24_0_9/hmmsearch.results.mcc49n5a [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.rk14an5t, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/FC_8_0_7/hmmsearch.results.qjmgr6qc [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.model.de9tx3im, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/FC_24_0_8/hmmsearch.results.xdu4j3w0 [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.model.de9tx3im, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/FC_24_0_5/hmmsearch.results.wkfob4og [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.model.de9tx3im, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/FC_24_0_7/hmmsearch.results.9txp8fv3 [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.rk14an5t, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/FC_8_0_5/hmmsearch.results.00nt2uj7 [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.model.de9tx3im, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/FC_24_0_3/hmmsearch.results.lmpnjm2a [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.model.5byd_jbu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/FC_30_0_1/hmmsearch.results._zbd7o9g [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.model.5byd_jbu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/FC_30_0_7/hmmsearch.results.8i9c4xl9 [01:42:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.model.5byd_jbu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/FC_30_0_6/hmmsearch.results.wwms0b4h [01:42:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.model.5byd_jbu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/FC_30_0_2/hmmsearch.results.kdkku1bm [01:42:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.model.5byd_jbu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/FC_30_0_0/hmmsearch.results.gn84ly9l [01:42:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.5bl4416a, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/FC_18_0_9/hmmsearch.results.hjxxd41l [01:42:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.model.5byd_jbu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/FC_30_0_5/hmmsearch.results.f1sd5c29 [01:42:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.5bl4416a, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/FC_18_0_1/hmmsearch.results.gao0tz7b [01:42:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.model.5byd_jbu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/FC_30_0_3/hmmsearch.results.7yw8908p [01:42:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.model.5byd_jbu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/FC_30_0_9/hmmsearch.results.42bi6yew [01:42:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.model.5byd_jbu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/FC_30_0_4/hmmsearch.results.0juul19l [01:42:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.model.5byd_jbu, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/FC_30_0_8/hmmsearch.results.urhyogtw [01:42:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.5bl4416a, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/FC_18_0_8/hmmsearch.results.ok7u2ayo [01:42:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.5bl4416a, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/FC_18_0_5/hmmsearch.results.b7k441my [01:42:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.5bl4416a, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/FC_18_0_6/hmmsearch.results.p8idjexg [01:42:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.model.2giyevnb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/FC_19_0_3/hmmsearch.results.u0l16bef [01:42:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.5bl4416a, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/FC_18_0_3/hmmsearch.results.mbssedd1 [01:42:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.0bf91zsz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_6/hmmsearch.results.do2ts050 [01:42:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.model.2giyevnb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/FC_19_0_9/hmmsearch.results.tl0814re [01:42:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.model.2giyevnb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/FC_19_0_0/hmmsearch.results.m3l5ip1i [01:42:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.0bf91zsz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_1/hmmsearch.results.pv1ytdtr [01:42:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.5bl4416a, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/FC_18_0_7/hmmsearch.results.mgh9fekf [01:42:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.5bl4416a, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/FC_18_0_4/hmmsearch.results.azbal96k [01:42:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.0bf91zsz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_3/hmmsearch.results.qoctt1m7 [01:42:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.model.2giyevnb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/FC_19_0_4/hmmsearch.results.x9pq_n9u [01:42:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.5bl4416a, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/FC_18_0_0/hmmsearch.results.2wm23yc1 [01:42:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.model.2giyevnb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/FC_19_0_8/hmmsearch.results.juhcu0d3 [01:42:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.model.2giyevnb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/FC_19_0_6/hmmsearch.results.i5q1x0wr [01:42:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.model.2giyevnb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/FC_19_0_7/hmmsearch.results.0osrf9cd [01:42:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.0bf91zsz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_0/hmmsearch.results.6tqs3hx7 [01:42:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.model.2giyevnb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/FC_19_0_2/hmmsearch.results.qq_5pry1 [01:42:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.model.ioxvf8_v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/FC_31_0_0/hmmsearch.results.ykr6s8rh [01:42:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.model.2giyevnb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/FC_19_0_1/hmmsearch.results.c3kugvrm [01:42:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.model.ioxvf8_v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/FC_31_0_4/hmmsearch.results.nsd7s2wx [01:42:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.0bf91zsz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_5/hmmsearch.results.zo2x_7m2 [01:42:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.5bl4416a, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/FC_18_0_2/hmmsearch.results.djz3cmfk [01:42:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.model.2giyevnb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/FC_19_0_5/hmmsearch.results.sm2w2zts [01:42:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.0bf91zsz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_7/hmmsearch.results.aq0jwyl0 [01:42:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.0bf91zsz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_2/hmmsearch.results.88bfof9l [01:42:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.model.ioxvf8_v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/FC_31_0_5/hmmsearch.results.0hhyxzl8 [01:42:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.model.r7fw8m2b, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_3/hmmsearch.results.fos1anj4 [01:42:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.model.ioxvf8_v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/FC_31_0_9/hmmsearch.results.blwmejeh [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.model.ioxvf8_v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/FC_31_0_7/hmmsearch.results.cfio7ij3 [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.0bf91zsz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_4/hmmsearch.results.32v8_v2r [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.model.r7fw8m2b, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_6/hmmsearch.results.vhfdwho_ [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.model.r7fw8m2b, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_0/hmmsearch.results.7nlmgdey [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.model.ioxvf8_v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/FC_31_0_3/hmmsearch.results.v9lqyjnz [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.0bf91zsz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_9/hmmsearch.results.9r9zvenm [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.model.ioxvf8_v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/FC_31_0_8/hmmsearch.results.bl2qhe9i [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.model.r7fw8m2b, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_5/hmmsearch.results.jhv2akmr [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.model.ioxvf8_v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/FC_31_0_2/hmmsearch.results.4kmodsmv [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.model.ioxvf8_v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/FC_31_0_1/hmmsearch.results.72payz6p [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.model.r7fw8m2b, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_1/hmmsearch.results.msemcomu [01:42:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.model.r7fw8m2b, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_4/hmmsearch.results.khy5_z7s [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.model.r7fw8m2b, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_7/hmmsearch.results.7w5clw3t [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.model.ioxvf8_v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/FC_31_0_6/hmmsearch.results.b91urlei [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.9og93ti2, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_5/hmmsearch.results.erfk78hu [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.0bf91zsz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_8/hmmsearch.results.xzq7e50z [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.model.fa04mj5z, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/FC_25_0_4/hmmsearch.results.mhiv2iil [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.model.r7fw8m2b, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_9/hmmsearch.results.mhdjlcz3 [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.model.r7fw8m2b, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_2/hmmsearch.results.jkriijbh [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.model.fa04mj5z, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/FC_25_0_3/hmmsearch.results.xmttsnp9 [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.w2aifn0u, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/FC_9_0_0/hmmsearch.results.zfooq640 [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.9og93ti2, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_1/hmmsearch.results.wsn4nxnw [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.9og93ti2, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_4/hmmsearch.results.ugylo8ex [01:42:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.9og93ti2, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_3/hmmsearch.results.cwg7kotl [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.model.fa04mj5z, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/FC_25_0_0/hmmsearch.results.bcfnspo4 [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.model.fa04mj5z, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/FC_25_0_9/hmmsearch.results.70xmlnxm [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.9og93ti2, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_8/hmmsearch.results.4f0d1xa7 [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.model.r7fw8m2b, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_8/hmmsearch.results.zqj8a_cm [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.model.fa04mj5z, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/FC_25_0_2/hmmsearch.results.n83b132j [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.w2aifn0u, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/FC_9_0_7/hmmsearch.results._l898v_i [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.w2aifn0u, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/FC_9_0_3/hmmsearch.results.nuf1gur9 [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.model.fa04mj5z, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/FC_25_0_8/hmmsearch.results.y99dmz_c [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.w2aifn0u, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/FC_9_0_2/hmmsearch.results.1fkoo1fh [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.w2aifn0u, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/FC_9_0_4/hmmsearch.results.1xh6gc0y [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.model.fa04mj5z, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/FC_25_0_7/hmmsearch.results.88ul_xjh [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.model.fa04mj5z, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/FC_25_0_5/hmmsearch.results.ykowhv07 [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.w2aifn0u, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/FC_9_0_1/hmmsearch.results.1eyo_zak [01:42:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.9og93ti2, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_6/hmmsearch.results.myqw4w3z [01:42:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.9og93ti2, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_7/hmmsearch.results.wg9ivub3 [01:42:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.w2aifn0u, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/FC_9_0_8/hmmsearch.results.m06go4yk [01:42:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.model.fa04mj5z, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/FC_25_0_1/hmmsearch.results.9kqyj8i_ [01:42:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.model.fa04mj5z, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/FC_25_0_6/hmmsearch.results.gouxkqxt [01:42:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.9og93ti2, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_9/hmmsearch.results.svc3rx8i [01:42:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.9og93ti2, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_2/hmmsearch.results.c7yyvv8y [01:42:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.w2aifn0u, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/FC_9_0_5/hmmsearch.results.z6u7bmkb [01:42:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.9og93ti2, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_0/hmmsearch.results.uqs1xcfb [01:42:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.model.319i76bq, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_6/hmmsearch.results.2qwwfkpq [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.model.319i76bq, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_0/hmmsearch.results.8hc410hd [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.model.319i76bq, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_2/hmmsearch.results.37w2h_3y [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.w2aifn0u, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/FC_9_0_6/hmmsearch.results.mphxg3aa [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.model.319i76bq, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_5/hmmsearch.results.dhegwll2 [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.ai86ew9m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/FC_10_0_9/hmmsearch.results.bi8ec4yk [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.model.319i76bq, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_4/hmmsearch.results._id4xo0p [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.model.uxcxjvtj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/FC_32_0_6/hmmsearch.results.lrybadkd [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.ai86ew9m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/FC_10_0_0/hmmsearch.results.sj67jv_b [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.model.319i76bq, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_3/hmmsearch.results.c0bnttig [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.model.319i76bq, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_9/hmmsearch.results.fd24go3r [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.ai86ew9m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/FC_10_0_3/hmmsearch.results._ywklomr [01:42:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.ai86ew9m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/FC_10_0_7/hmmsearch.results.srpm_cn4 [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.w2aifn0u, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/FC_9_0_9/hmmsearch.results.jsg1jd_d [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.model.uxcxjvtj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/FC_32_0_1/hmmsearch.results.upkdcvdo [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.model.319i76bq, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_1/hmmsearch.results.7umo3ihc [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.model.319i76bq, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_7/hmmsearch.results.fqkpso6e [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.model.319i76bq, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_8/hmmsearch.results.91pgz457 [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ag_t53u1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_2/hmmsearch.results.xqcz3n35 [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.ai86ew9m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/FC_10_0_5/hmmsearch.results.lwdpx5ww [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.model.uxcxjvtj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/FC_32_0_4/hmmsearch.results.e2biaz34 [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.model.uxcxjvtj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/FC_32_0_9/hmmsearch.results.2x6itspq [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.ai86ew9m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/FC_10_0_4/hmmsearch.results.7fqx1vfw [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.ai86ew9m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/FC_10_0_1/hmmsearch.results.ny32hwz8 [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.model.uxcxjvtj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/FC_32_0_3/hmmsearch.results.wj9ilfey [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.model.uxcxjvtj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/FC_32_0_2/hmmsearch.results.lhgrn462 [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.ai86ew9m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_295tn83gi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/FC_10_0_2/hmmsearch.results.gep2nmnc [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.model.uxcxjvtj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/FC_32_0_0/hmmsearch.results.ljdksz35 [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.model.uxcxjvtj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/FC_32_0_5/hmmsearch.results.eykwm9it [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.ai86ew9m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/FC_10_0_8/hmmsearch.results.93iyi209 [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.model.uxcxjvtj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/FC_32_0_8/hmmsearch.results.8hlronb7 [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.ai86ew9m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/FC_10_0_6/hmmsearch.results.717bcba2 [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ag_t53u1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_586icyru0.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_5/hmmsearch.results.e9frz24k [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ag_t53u1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_403ft6jsx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_4/hmmsearch.results.uncgyd5b [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ag_t53u1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_7/hmmsearch.results.donr7m2g [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ag_t53u1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_08pbapcgp.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_0/hmmsearch.results.p9r_5kfe [01:42:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ag_t53u1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_14nlnryhi.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_1/hmmsearch.results.xe7bxnb1 [01:42:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ag_t53u1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8us8x9y0t.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_8/hmmsearch.results.q9cqcyyx [01:42:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ag_t53u1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9hjkx4z9u.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_9/hmmsearch.results.3nxulwf9 [01:42:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ag_t53u1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ebq9jx7w.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_6/hmmsearch.results.xgmmwlpq [01:42:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ag_t53u1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3782pl_t4.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_3/hmmsearch.results.zkcx38xl [01:42:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.model.uxcxjvtj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7tl6759jx.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/FC_32_0_7/hmmsearch.results.av7sp5gu [01:42:12] checkpointing.py (line 68): INFO: Checkpoint Saved to: /tmp/sepp/output.zsliazi_/checkpoints/dump76g53klp and linked in /tmp/tmpnub8d8bz. [01:42:12] exhaustive.py (line 80): WARNING: Fragments [] are not scored against any subset [01:42:13] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.gu8z7lhe, fragments:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_0/hmmalign.frag.1w25fgto.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.kwjxl0ta.fasta [01:42:13] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_2/hmmalign.frag.8isa45ou.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.d0nkcwk2.fasta [01:42:13] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.wme06_b7, fragments:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_0/hmmalign.frag.6sba2noj.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.rlmkgk99.fasta [01:42:13] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.v_5l_tu4, fragments:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_0/hmmalign.frag.p4s_a_qg.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.4zxe_l2o.fasta [01:42:13] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_1/hmmalign.frag.zq9b04k9.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.d0nkcwk2.fasta [01:42:13] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_0. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.8d0nw4de.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:13] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0j8arqqr, fragments:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_0/hmmalign.frag.0kfox87e.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.2f8mbxp7.fasta [01:42:13] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.mrsouiby, fragments:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_0/hmmalign.frag.vi7hc4gy.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.djyj7h7q.fasta [01:42:13] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.txx1a7td, fragments:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_0/hmmalign.frag.hgh0z5jw.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.d0nkcwk2.fasta [01:42:13] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.model.319i76bq, fragments:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_0/hmmalign.frag._vi1_gci.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.input.hl920856.fasta [01:42:13] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.model.r7fw8m2b, fragments:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_0/hmmalign.frag.se4nfoj_.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.input.j12_jjp0.fasta [01:42:14] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_1. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.wca2ppli.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:14] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_5. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.kwjxl0ta.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_0/hmmalign.results.8kqei3ep' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:14] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_0/hmmalign.results.8kqei3ep) into base alignment (/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.kwjxl0ta.fasta). [01:42:14] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.backbone.xrz4pkl9.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.tree.mc8gmk3m.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.extended.0.26b6r5tk.fasta, output:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.extended.0.26b6r5tk.jplace [01:42:14] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_8. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.orqulqkr.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:15] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_9. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input.gf8j5kf2.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:15] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_2. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.4zxe_l2o.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_0/hmmalign.results.m3dpv6pp' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:15] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_0/hmmalign.results.m3dpv6pp) into base alignment (/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.4zxe_l2o.fasta). [01:42:15] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.backbone.zxietxjv.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.tree.q2p2jhd0.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.extended.0.ecl9inbe.fasta, output:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.extended.0.ecl9inbe.jplace [01:42:15] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_7. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.rlmkgk99.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_0/hmmalign.results.5a0cpi_f' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:15] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_0/hmmalign.results.5a0cpi_f) into base alignment (/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.rlmkgk99.fasta). [01:42:16] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_3. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.2f8mbxp7.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:16] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_7/pplacer.backbone.8rmu4vby.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_7/pplacer.tree.ri6_uysk.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_7/pplacer.extended.0.jcl0xy0f.fasta, output:/tmp/sepp/output.zsliazi_/root/P_7/pplacer.extended.0.jcl0xy0f.jplace /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_0/hmmalign.results.3rwr0rfv' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:16] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_0/hmmalign.results.3rwr0rfv) into base alignment (/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.2f8mbxp7.fasta). [01:42:16] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_4. [01:42:16] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_3/pplacer.backbone.g3jxsr7e.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_3/pplacer.tree.1qlft3du.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_3/pplacer.extended.0.z8o_xwcm.fasta, output:/tmp/sepp/output.zsliazi_/root/P_3/pplacer.extended.0.z8o_xwcm.jplace /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.djyj7h7q.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_0/hmmalign.results.6x_zkxeb' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:16] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_0/hmmalign.results.6x_zkxeb) into base alignment (/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.djyj7h7q.fasta). [01:42:16] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.backbone.e0af8nt6.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.tree.3gqyihnb.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.extended.0.5ygau26i.fasta, output:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.extended.0.5ygau26i.jplace [01:42:17] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_6. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.d0nkcwk2.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_0/hmmalign.results.bj3rkmc9' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:17] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_0/hmmalign.results.bj3rkmc9) into base alignment (/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.d0nkcwk2.fasta). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_1/hmmalign.results.4ey6gy3f' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:17] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_1/hmmalign.results.4ey6gy3f) into base alignment (/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.d0nkcwk2.fasta). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_2/hmmalign.results.4_ol87kh' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:17] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_2/hmmalign.results.4_ol87kh) into base alignment (/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.d0nkcwk2.fasta). [01:42:17] checkpointing.py (line 49): INFO: Checkpoint is being updated: /tmp/sepp/output.zsliazi_/checkpoints/dump1o12rj1o [01:42:17] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.backbone.rnvs03hp.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.tree.cvid8ggm.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.extended.2.urn5v2ho.fasta, output:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.extended.2.urn5v2ho.jplace [01:42:17] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.backbone.2uj7177l.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.tree.parterdl.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.extended.1.ner_7ulp.fasta, output:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.extended.1.ner_7ulp.jplace [01:42:17] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.backbone.vu98aq_4.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.tree.zrw5lj4y.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.extended.0.dw5iqmup.fasta, output:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.extended.0.dw5iqmup.jplace [01:42:17] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_13. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.p53lercv.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:18] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_14. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.hatnma_n.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:19] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_11. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.rzrww2gr.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:19] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_10. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input.l2up8lhc.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:19] checkpointing.py (line 68): INFO: Checkpoint Saved to: /tmp/sepp/output.zsliazi_/checkpoints/dump1o12rj1o and linked in /tmp/tmpnub8d8bz. [01:42:20] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_12. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.69yjemm_.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:20] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_15. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.6hlezud0.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:20] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_16. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input.vs379w6e.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:21] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_17. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.input.9ou1_jma.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:21] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_18. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.input.s8y7nhjf.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:21] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_19. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_19/A_19_0/hmmbuild.input.y9fl8_9e.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:21] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_20. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_20/A_20_0/hmmbuild.input.x3m3h8bu.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:22] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_22. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_22/A_22_0/hmmbuild.input.a7hyuvuh.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:22] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_25. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_25/A_25_0/hmmbuild.input.zl7xa28g.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:22] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_26. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_26/A_26_0/hmmbuild.input.u6gievs0.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:22] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_24. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_24/A_24_0/hmmbuild.input.00aze_ro.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:23] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_23. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_23/A_23_0/hmmbuild.input.97p1b8ee.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:23] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_28. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_28/A_28_0/hmmbuild.input.15n2uwap.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:23] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_29. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_29/A_29_0/hmmbuild.input.wbtoj79s.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:23] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_21. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.input.hl920856.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_0/hmmalign.results.y4517fhr' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:23] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/FC_21_0_0/hmmalign.results.y4517fhr) into base alignment (/tmp/sepp/output.zsliazi_/root/P_21/A_21_0/hmmbuild.input.hl920856.fasta). [01:42:24] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_30. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_30/A_30_0/hmmbuild.input.zmj0xqeq.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:24] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_21/pplacer.backbone.kuslna1s.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_21/pplacer.tree.blz9gveu.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_21/pplacer.extended.0.w7faue6a.fasta, output:/tmp/sepp/output.zsliazi_/root/P_21/pplacer.extended.0.w7faue6a.jplace [01:42:24] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_31. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_31/A_31_0/hmmbuild.input.mdik76_0.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:24] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_32. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_32/A_32_0/hmmbuild.input.p027yosr.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:24] checkpointing.py (line 49): INFO: Checkpoint is being updated: /tmp/sepp/output.zsliazi_/checkpoints/dumpq8xn_ig7 [01:42:25] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_27. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.input.j12_jjp0.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_0/hmmalign.results.0l8tgpc5' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:25] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/FC_27_0_0/hmmalign.results.0l8tgpc5) into base alignment (/tmp/sepp/output.zsliazi_/root/P_27/A_27_0/hmmbuild.input.j12_jjp0.fasta). [01:42:25] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_27/pplacer.backbone.ifmwcifa.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_27/pplacer.tree.owhqdc8h.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_27/pplacer.extended.0.3e37ya5_.fasta, output:/tmp/sepp/output.zsliazi_/root/P_27/pplacer.extended.0.3e37ya5_.jplace [01:42:27] checkpointing.py (line 68): INFO: Checkpoint Saved to: /tmp/sepp/output.zsliazi_/checkpoints/dumpq8xn_ig7 and linked in /tmp/tmpnub8d8bz. [01:42:27] checkpointing.py (line 147): INFO: Paused Checkpointing. Cumulative time: 70 [01:42:32] jobs.py (line 131): INFO: Finished jsonmerger Job with input: input:pipe output:/tmp/tmp4rxlcclw/output_placement.json [01:42:32] checkpointing.py (line 136): INFO: Stop Checkpointing. Cumulative time: 70 [01:42:32] algorithm.py (line 195): INFO: Current execution Finished in 78 seconds [01:42:32] algorithm.py (line 197): INFO: All checkpointed executions Finished in 70 cumulative time /tmp/tmp.0KK4bnmz77/test/unittest/testCheckPoint.py:29: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> self.x.options.alignment_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testCheckPoint.py:32: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info' mode='r' encoding='UTF-8'> self.x.options.info_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testCheckPoint.py:36: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> self.x.options.tree_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testCheckPoint.py:39: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/input_fragments.fasta' mode='r' encoding='UTF-8'> self.x.options.fragment_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback ok testConfigFile (testConfig.Test) ... /tmp/tmp.0KK4bnmz77/test/unittest/testConfig.py:34: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> config._options_singelton = None ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testConfig.py:34: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info' mode='r' encoding='UTF-8'> config._options_singelton = None ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testConfig.py:34: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> config._options_singelton = None ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testConfig.py:34: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/input_fragments.fasta' mode='r' encoding='UTF-8'> config._options_singelton = None ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/config.py:66: DeprecationWarning: This method will be removed in future versions. Use 'parser.read_file()' instead. cparser.readfp(filename) /tmp/tmp.0KK4bnmz77/sepp/config.py:323: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpsbo1zh2t' mode='r' encoding='UTF-8'> main_cmd_defaults = _read_config_file( ResourceWarning: Enable tracemalloc to get the object allocation traceback /usr/lib/python3.9/argparse.py:941: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/configs/test.config' mode='r' encoding='UTF-8'> setattr(namespace, self.dest, values) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:33] config.py (line 350): INFO: Seed number: 297834 ok testConfigFileMissingFile (testConfig.Test) ... /tmp/tmp.0KK4bnmz77/test/unittest/testConfig.py:66: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/configs/test.config' mode='r' encoding='UTF-8'> config._options_singelton = None ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/config.py:323: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpo7fhsdz4' mode='r' encoding='UTF-8'> main_cmd_defaults = _read_config_file( ResourceWarning: Enable tracemalloc to get the object allocation traceback /usr/lib/python3.9/argparse.py:941: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/configs/test2.config' mode='r' encoding='UTF-8'> setattr(namespace, self.dest, values) ResourceWarning: Enable tracemalloc to get the object allocation traceback /usr/lib/python3.9/argparse.py:941: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/simulated/test.fas' mode='r' encoding='UTF-8'> setattr(namespace, self.dest, values) ResourceWarning: Enable tracemalloc to get the object allocation traceback /usr/lib/python3.9/argparse.py:941: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/simulated/test.small.fas' mode='r' encoding='UTF-8'> setattr(namespace, self.dest, values) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:33] config.py (line 350): INFO: Seed number: 297834 ok testCpuCount (testConfig.Test) ... /tmp/tmp.0KK4bnmz77/test/unittest/testConfig.py:120: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/configs/test2.config' mode='r' encoding='UTF-8'> config._options_singelton = None ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testConfig.py:120: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/simulated/test.small.fas' mode='r' encoding='UTF-8'> config._options_singelton = None ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testConfig.py:120: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/simulated/test.fas' mode='r' encoding='UTF-8'> config._options_singelton = None ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/config.py:323: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpf0iy2quw' mode='r' encoding='UTF-8'> main_cmd_defaults = _read_config_file( ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:33] config.py (line 350): INFO: Seed number: 297834 [01:42:33] config.py (line 350): INFO: Seed number: 297834 ok testLog (testConfig.Test) ... ok testMainConfigFile (testConfig.Test) ... /tmp/tmp.0KK4bnmz77/sepp/config.py:318: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead _LOG.warn( [01:42:33] config.py (line 318): WARNING: Main configuration file was not found at: /tmp/tmpf0iy2quw Proceeding without the main configuration... [01:42:33] config.py (line 350): INFO: Seed number: 297834 ok testError (testExternalJobs.Test) ... Traceback (most recent call last): File "/tmp/tmp.0KK4bnmz77/sepp/jobs.py", line 150, in run raise JobError("\n".join([ sepp.scheduler.JobError: The following execution failed: find somerandomdirectorywewillneverhavehere_ordowe find: ‘somerandomdirectorywewillneverhavehere_ordowe’: No such file or directory ok testNoPipe (testExternalJobs.Test) ... [01:42:34] jobs.py (line 131): INFO: Finished test_find_job Job with input: pattern: . options: -name *.py (pipe: 1) /usr/lib/python3.9/multiprocessing/pool.py:138: ResourceWarning: unclosed file <_io.TextIOWrapper name='./.stdout' mode='w' encoding='UTF-8'> task = job = result = func = args = kwds = None ResourceWarning: Enable tracemalloc to get the object allocation traceback /usr/lib/python3.9/multiprocessing/pool.py:138: ResourceWarning: unclosed file <_io.TextIOWrapper name='./.stderr' mode='w' encoding='UTF-8'> task = job = result = func = args = kwds = None ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/jobs.py:169: ResourceWarning: unclosed file <_io.TextIOWrapper name='./.stderr' mode='r' encoding='UTF-8'> return open(self._kwargs["stderr"].name, 'r').read() ResourceWarning: Enable tracemalloc to get the object allocation traceback Traceback (most recent call last): File "/tmp/tmp.0KK4bnmz77/sepp/jobs.py", line 150, in run raise JobError("\n".join([ sepp.scheduler.JobError: The following execution failed: find somerandomdirectorywewillneverhavehere_ordowe find: ‘somerandomdirectorywewillneverhavehere_ordowe’: No such file or directory /usr/lib/python3.9/multiprocessing/pool.py:138: ResourceWarning: unclosed file <_io.TextIOWrapper name='./.stdout' mode='w' encoding='UTF-8'> task = job = result = func = args = kwds = None ResourceWarning: Enable tracemalloc to get the object allocation traceback /usr/lib/python3.9/multiprocessing/pool.py:138: ResourceWarning: unclosed file <_io.TextIOWrapper name='./.stderr' mode='w' encoding='UTF-8'> task = job = result = func = args = kwds = None ResourceWarning: Enable tracemalloc to get the object allocation traceback ok testSuccess (testExternalJobs.Test) ... [01:42:35] jobs.py (line 131): INFO: Finished test_find_job Job with input: pattern: . options: -name test*.py (pipe: 0) [01:42:35] jobs.py (line 131): INFO: Finished test_find_job Job with input: pattern: .. options: -name testAlignment.py (pipe: 0) ok testMerge (testMerge.Test) ... /tmp/tmp.0KK4bnmz77/test/unittest/testMerge.py:25: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/tmp/tempmerge' mode='r' encoding='UTF-8'> stdindata = open(get_data_path("tmp/tempmerge")).read() ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:41] jobs.py (line 131): INFO: Finished jsonmerger Job with input: input:pipe output:/tmp/tmp.0KK4bnmz77/test/unittest/data/tmp/mergedfile ok test_diamCent (testMidpoint.Test) ... [01:42:41] algorithm.py (line 258): INFO: Reading input alignment: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> [01:42:41] algorithm.py (line 265): INFO: Reading input tree: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> /usr/lib/python3.9/multiprocessing/pool.py:265: ResourceWarning: unclosed running multiprocessing pool _warn(f"unclosed running multiprocessing pool {self!r}", ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:42:42] algorithm.py (line 238): INFO: Decomposition Sizes are set to alignment: 40 placement: 40 [01:42:42] exhaustive.py (line 350): INFO: Breaking into 17 placement subsets. [01:42:42] exhaustive.py (line 397): INFO: Breaking into 17 alignment subsets. [01:42:42] exhaustive.py (line 412): INFO: Breaking each alignment subset into 32 fragment chunks. [01:42:56] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.8oz9dson.fasta [01:42:57] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.lpikf0a7.fasta [01:42:57] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.2_lqwc0e.fasta [01:42:57] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.0pftf69j.fasta [01:42:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.fpbqxzzd, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:42:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.fpbqxzzd, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:42:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.fpbqxzzd, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:42:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.fpbqxzzd, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:42:59] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.y6ocefow.fasta [01:42:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.fpbqxzzd, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:42:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.fpbqxzzd, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:42:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.fpbqxzzd, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:42:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.8rb7ke5n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.8rb7ke5n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.8rb7ke5n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.fpbqxzzd, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.8rb7ke5n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.8rb7ke5n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.8rb7ke5n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.fpbqxzzd, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.fpbqxzzd, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.8rb7ke5n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.8rb7ke5n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.2v_1_osc.fasta [01:43:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.oq5l6g1_.fasta [01:43:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.m5j1hgth.fasta [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.8rb7ke5n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input.522cmqou.fasta [01:43:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.cyefgi4t.fasta [01:43:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.q29zrknc.fasta [01:43:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input.yu5_35uh.fasta [01:43:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:01] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.av1x4akr.fasta [01:43:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.8rb7ke5n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:01] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.fhxkncee.fasta [01:43:01] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.ener448o.fasta [01:43:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:01] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input.zfhqomrx.fasta [01:43:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.e0fs9qmo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.e0fs9qmo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.e0fs9qmo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.3796ox9h, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.3796ox9h, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.3796ox9h, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.e0fs9qmo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.e0fs9qmo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.3796ox9h, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.e0fs9qmo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.e0fs9qmo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.e0fs9qmo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.21wbhy_g.fasta [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.e0fs9qmo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.9fwuqemf, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.e0fs9qmo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.3796ox9h, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.9fwuqemf, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.9fwuqemf, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.9fwuqemf, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bwahi5qt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.3796ox9h, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bwahi5qt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.9fwuqemf, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.3796ox9h, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.9fwuqemf, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.9fwuqemf, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bwahi5qt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bwahi5qt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bwahi5qt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.9fwuqemf, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bwahi5qt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.9fwuqemf, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bwahi5qt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.3796ox9h, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.9fwuqemf, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.3796ox9h, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bwahi5qt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.3796ox9h, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.r5n7oslx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.r5n7oslx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.r5n7oslx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.r5n7oslx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.r5n7oslx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bwahi5qt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.r5n7oslx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.bzzw6meg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.bzzw6meg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bwahi5qt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.r5n7oslx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.r5n7oslx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.eeccu23n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.bzzw6meg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.bzzw6meg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.bzzw6meg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.bzzw6meg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.r5n7oslx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.bzzw6meg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.eeccu23n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.bzzw6meg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.eeccu23n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.eeccu23n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.eeccu23n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.eeccu23n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.1i1a7bnl, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.eeccu23n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.1i1a7bnl, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.eeccu23n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.1i1a7bnl, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.r5n7oslx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.bzzw6meg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.1i1a7bnl, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.1i1a7bnl, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.bzzw6meg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.1i1a7bnl, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.1i1a7bnl, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.1i1a7bnl, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.qoj065b_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.eeccu23n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.qoj065b_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.qoj065b_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.1i1a7bnl, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.qoj065b_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.eeccu23n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.1i1a7bnl, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.mv5hc6ac, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.mv5hc6ac, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.qoj065b_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.qoj065b_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.mv5hc6ac, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.mv5hc6ac, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.krzc0125, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.krzc0125, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.qoj065b_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.mv5hc6ac, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.krzc0125, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.krzc0125, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.qoj065b_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.mv5hc6ac, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.krzc0125, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.mv5hc6ac, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.qoj065b_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.krzc0125, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.krzc0125, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.mv5hc6ac, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.krzc0125, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.qoj065b_, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.mv5hc6ac, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.oo41y72g, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.mv5hc6ac, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.krzc0125, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.oo41y72g, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.oo41y72g, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.oo41y72g, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.krzc0125, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.oo41y72g, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.eqrcl097, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.eqrcl097, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2jow1dwb0.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.eqrcl097, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7gapi8f1v.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.eqrcl097, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.oo41y72g, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52t9ya74e.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.oo41y72g, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.eqrcl097, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9ugs7qfcq.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.oo41y72g, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.oo41y72g, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6ls0oi33b.fasta, elim:99999999, filter:False, output:Piped [01:43:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.eqrcl097, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1p_yr5k95.fasta, elim:99999999, filter:False, output:Piped [01:43:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.eqrcl097, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4puukurwg.fasta, elim:99999999, filter:False, output:Piped [01:43:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.oo41y72g, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.eqrcl097, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0418f1g1z.fasta, elim:99999999, filter:False, output:Piped [01:43:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.eqrcl097, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3w62_ffvj.fasta, elim:99999999, filter:False, output:Piped [01:43:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.eqrcl097, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8xxpvijay.fasta, elim:99999999, filter:False, output:Piped [01:43:16] exhaustive.py (line 80): WARNING: Fragments [] are not scored against any subset [01:43:16] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_1/hmmalign.frag.j74xelrx.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.2_lqwc0e.fasta [01:43:16] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.mv5hc6ac, fragments:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_0/hmmalign.frag.orp08u07.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.av1x4akr.fasta [01:43:16] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_0/hmmalign.frag.dikuw6e6.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.2_lqwc0e.fasta [01:43:16] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_0/hmmalign.frag.7mgsgyjd.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.fhxkncee.fasta [01:43:16] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.3qh5bfk0, fragments:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_2/hmmalign.frag.q_xvuytg.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.2_lqwc0e.fasta [01:43:16] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.atyi7e9j, fragments:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_1/hmmalign.frag.z41k404m.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.fhxkncee.fasta [01:43:17] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.eeccu23n, fragments:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_0/hmmalign.frag.wmlf2i01.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.q29zrknc.fasta [01:43:17] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.fpbqxzzd, fragments:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.frag._cf_nt0v.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.8oz9dson.fasta [01:43:17] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_4. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:293: DeprecationWarning: 'U' mode is deprecated file_obj = open(filename, 'rU') /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.2v_1_osc.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:17] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.e0fs9qmo, fragments:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_0/hmmalign.frag.id7pqymp.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.0pftf69j.fasta [01:43:17] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.8rb7ke5n, fragments:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_0/hmmalign.frag.91ady5ne.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.lpikf0a7.fasta [01:43:17] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_5. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.oq5l6g1_.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:17] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_7. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.ener448o.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:18] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_6. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.cyefgi4t.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:18] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_8. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.y6ocefow.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:19] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_9. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input.zfhqomrx.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:19] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_10. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input.yu5_35uh.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:19] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_0. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.av1x4akr.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:574: DeprecationWarning: 'U' mode is deprecated handle = open(path, 'rU') /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_0/hmmalign.results.39vtcjgy' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:19] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_0/hmmalign.results.39vtcjgy) into base alignment (/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.av1x4akr.fasta). [01:43:20] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_13. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.m5j1hgth.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:20] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_0/pplacer.backbone.vntkgq02.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_0/pplacer.tree.68qvohz1.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_0/pplacer.extended.0.7dkkfbgr.fasta, output:/tmp/sepp/output.zsliazi_/root/P_0/pplacer.extended.0.7dkkfbgr.jplace [01:43:20] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_12. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.21wbhy_g.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:20] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_1. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.2_lqwc0e.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_0/hmmalign.results.1e7ldmwl' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:20] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_0/hmmalign.results.1e7ldmwl) into base alignment (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.2_lqwc0e.fasta). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_1/hmmalign.results.mxxfk4r1' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:20] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_1/hmmalign.results.mxxfk4r1) into base alignment (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.2_lqwc0e.fasta). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_2/hmmalign.results.l310m5v_' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:21] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_2/hmmalign.results.l310m5v_) into base alignment (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.2_lqwc0e.fasta). [01:43:21] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_2. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.fhxkncee.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_0/hmmalign.results.p98lhfdc' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:21] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_0/hmmalign.results.p98lhfdc) into base alignment (/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.fhxkncee.fasta). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_1/hmmalign.results.jwivjs5e' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:21] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_1/hmmalign.results.jwivjs5e) into base alignment (/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.fhxkncee.fasta). [01:43:21] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.backbone.rjhy8f23.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.tree.i7smci99.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.0.v2ji1wfo.fasta, output:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.0.v2ji1wfo.jplace [01:43:21] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.backbone.intpuvra.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.tree.b8gvqwvy.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.1.12ai3245.fasta, output:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.1.12ai3245.jplace [01:43:21] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.backbone.rn6pv1go.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.tree.dmbup4jh.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.2.yxyj5ymg.fasta, output:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.2.yxyj5ymg.jplace [01:43:22] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_3. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.q29zrknc.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_0/hmmalign.results.5v83zgve' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:22] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_0/hmmalign.results.5v83zgve) into base alignment (/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.q29zrknc.fasta). [01:43:22] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.backbone.hjuyteq_.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.tree.keob5wuw.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.extended.1.ft7pjx5z.fasta, output:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.extended.1.ft7pjx5z.jplace [01:43:22] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.backbone.114xdx6d.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.tree.f3jcfyr7.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.extended.0.rtshcuu2.fasta, output:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.extended.0.rtshcuu2.jplace [01:43:22] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_11. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.8oz9dson.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.results._0z5el8k' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:22] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.results._0z5el8k) into base alignment (/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.8oz9dson.fasta). [01:43:22] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_3/pplacer.backbone.b9c5bihs.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_3/pplacer.tree.9tjvhl2a.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_3/pplacer.extended.0.466w3nyx.fasta, output:/tmp/sepp/output.zsliazi_/root/P_3/pplacer.extended.0.466w3nyx.jplace [01:43:23] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.backbone.mb7kd08z.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.tree.gntsp1mx.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.extended.0._3kzjrh1.fasta, output:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.extended.0._3kzjrh1.jplace [01:43:23] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_16. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input.522cmqou.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:23] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_14. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.0pftf69j.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_0/hmmalign.results.chbjcd_9' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:23] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_0/hmmalign.results.chbjcd_9) into base alignment (/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.0pftf69j.fasta). [01:43:23] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_15. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.lpikf0a7.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_0/hmmalign.results.1zba2eh_' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:23] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_0/hmmalign.results.1zba2eh_) into base alignment (/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.lpikf0a7.fasta). [01:43:24] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_14/pplacer.backbone.jc839wcu.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_14/pplacer.tree.fm0mktae.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_14/pplacer.extended.0.ep0xn7_n.fasta, output:/tmp/sepp/output.zsliazi_/root/P_14/pplacer.extended.0.ep0xn7_n.jplace [01:43:24] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_15/pplacer.backbone.pkxanqk4.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_15/pplacer.tree.gui2119k.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_15/pplacer.extended.0.r0tam6bb.fasta, output:/tmp/sepp/output.zsliazi_/root/P_15/pplacer.extended.0.r0tam6bb.jplace [01:43:28] jobs.py (line 131): INFO: Finished jsonmerger Job with input: input:pipe output:/tmp/tmpu63_34p0/output_placement.json [01:43:28] algorithm.py (line 195): INFO: Current execution Finished in 47 seconds [01:43:28] algorithm.py (line 197): INFO: All checkpointed executions Finished in 134 cumulative time /tmp/tmp.0KK4bnmz77/test/unittest/testMidpoint.py:27: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> self.x.options.alignment_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testMidpoint.py:30: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info' mode='r' encoding='UTF-8'> self.x.options.info_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testMidpoint.py:34: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> self.x.options.tree_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback ok test_diamMid (testMidpoint.Test) ... /tmp/tmp.0KK4bnmz77/test/unittest/testMidpoint.py:56: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/input_fragments.fasta' mode='r' encoding='UTF-8'> self.x.options.fragment_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:43:29] algorithm.py (line 258): INFO: Reading input alignment: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> [01:43:29] algorithm.py (line 265): INFO: Reading input tree: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> [01:43:29] algorithm.py (line 238): INFO: Decomposition Sizes are set to alignment: 40 placement: 40 [01:43:29] exhaustive.py (line 350): INFO: Breaking into 17 placement subsets. [01:43:29] exhaustive.py (line 397): INFO: Breaking into 17 alignment subsets. [01:43:29] exhaustive.py (line 412): INFO: Breaking each alignment subset into 32 fragment chunks. [01:43:43] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.o8u7nlia.fasta [01:43:43] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.cjipfxr2.fasta [01:43:44] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.m5gc95ls.fasta [01:43:44] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input._sjbjcsi.fasta [01:43:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.hbefwkw3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:44] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input.8uoo4wjb.fasta [01:43:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.hbefwkw3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:44] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.1b_12gfu.fasta [01:43:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.hbefwkw3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.hbefwkw3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:44] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.c_c_get5.fasta [01:43:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.hbefwkw3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:44] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.hbefwkw3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:45] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.rz7pmmvh.fasta [01:43:45] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.41_ob0do.fasta [01:43:45] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.wx6k3cdw.fasta [01:43:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.gjcg24t3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.gjcg24t3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.hbefwkw3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.gjcg24t3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.gjcg24t3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.gjcg24t3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.gjcg24t3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:45] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.hbefwkw3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.gjcg24t3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.hbefwkw3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.gjcg24t3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:46] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.0z543khm.fasta [01:43:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.hbefwkw3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.kkb2a8qo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.kkb2a8qo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.kkb2a8qo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:46] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.gjcg24t3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:46] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.nho6k1qe.fasta [01:43:46] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.c_45fxv0.fasta [01:43:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fzosbjzy, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.kkb2a8qo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:47] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.wmhggdj5.fasta [01:43:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.kkb2a8qo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.kkb2a8qo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.gjcg24t3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.kkb2a8qo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.kkb2a8qo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fzosbjzy, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u5i8snss, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.kkb2a8qo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:47] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input._0_rb5di.fasta [01:43:47] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u5i8snss, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fzosbjzy, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fzosbjzy, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.kkb2a8qo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fzosbjzy, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u5i8snss, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u5i8snss, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u5i8snss, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fzosbjzy, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fzosbjzy, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:48] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u5i8snss, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.j80nzx_d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.j80nzx_d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fzosbjzy, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.j80nzx_d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fzosbjzy, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u5i8snss, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u5i8snss, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.94jrabui, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u5i8snss, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fzosbjzy, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u5i8snss, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:49] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.j80nzx_d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.94jrabui, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.j80nzx_d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.j80nzx_d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.t8qzk208, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.94jrabui, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.t8qzk208, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.j80nzx_d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.94jrabui, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.j80nzx_d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:50] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.94jrabui, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.94jrabui, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.ebm198f9, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.t8qzk208, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.t8qzk208, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.t8qzk208, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.j80nzx_d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.94jrabui, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.j80nzx_d, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.94jrabui, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:51] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.t8qzk208, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.ebm198f9, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.ebm198f9, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.t8qzk208, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.ebm198f9, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.t8qzk208, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.dclqpos8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.ebm198f9, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.ebm198f9, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:52] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.t8qzk208, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.dclqpos8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.ebm198f9, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.dclqpos8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.t8qzk208, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.94jrabui, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.dclqpos8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.dclqpos8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.ebm198f9, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.94jrabui, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:53] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.v8pbg954, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:54] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.dclqpos8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:54] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.v8pbg954, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:54] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.ne9u_ois, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:54] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.v8pbg954, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.dclqpos8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.dclqpos8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.dclqpos8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.ebm198f9, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.ne9u_ois, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.ebm198f9, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:55] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input._1rhn1uk.fasta [01:43:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.v8pbg954, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:55] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.ne9u_ois, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.6ntbv16f, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.ne9u_ois, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.v8pbg954, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.ne9u_ois, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:56] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.2talgieo.fasta [01:43:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.ne9u_ois, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.ne9u_ois, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.6ntbv16f, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.v8pbg954, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.v8pbg954, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.v8pbg954, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:56] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.6ntbv16f, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.dclqpos8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.ne9u_ois, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.v8pbg954, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.ne9u_ois, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.v8pbg954, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.6ntbv16f, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.6ntbv16f, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.ne9u_ois, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.6ntbv16f, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:57] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.6ntbv16f, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.poyj4zb6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.6ntbv16f, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.poyj4zb6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.6ntbv16f, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.6ntbv16f, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:58] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.poyj4zb6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.89lf4234, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.89lf4234, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.poyj4zb6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.89lf4234, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.poyj4zb6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.poyj4zb6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.poyj4zb6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.poyj4zb6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.89lf4234, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:43:59] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.89lf4234, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.89lf4234, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.89lf4234, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6kxlc31g_.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4q6b8qnoy.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.poyj4zb6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_52ls06na6.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.89lf4234, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2s0h3_6pg.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0_7seieyd.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_8j0hrooyz.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.poyj4zb6, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3x2axmfft.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1avj0p8t1.fasta, elim:99999999, filter:False, output:Piped [01:44:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.89lf4234, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_7wtl6os4w.fasta, elim:99999999, filter:False, output:Piped [01:44:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.89lf4234, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_982acf940.fasta, elim:99999999, filter:False, output:Piped [01:44:01] exhaustive.py (line 80): WARNING: Fragments [] are not scored against any subset [01:44:01] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.hbefwkw3, fragments:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_0/hmmalign.frag.6vjkw0f_.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.o8u7nlia.fasta [01:44:01] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.6ntbv16f, fragments:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_0/hmmalign.frag.rm5slbbt.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.c_45fxv0.fasta [01:44:01] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_0. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:293: DeprecationWarning: 'U' mode is deprecated file_obj = open(filename, 'rU') /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.41_ob0do.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:01] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.t8qzk208, fragments:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_0/hmmalign.frag.d29rbyz8.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.rz7pmmvh.fasta [01:44:01] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.fzosbjzy, fragments:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_0/hmmalign.frag.nl9eopha.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input._sjbjcsi.fasta [01:44:02] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.j80nzx_d, fragments:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.frag.08rgacrz.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.1b_12gfu.fasta [01:44:02] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_0/hmmalign.frag.apny6czh.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.2talgieo.fasta [01:44:02] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_1/hmmalign.frag.8e0j34lw.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.wmhggdj5.fasta [01:44:02] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_0/hmmalign.frag.864zaeet.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.wmhggdj5.fasta [01:44:02] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.j42o96o3, fragments:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_2/hmmalign.frag.wxyh7qw1.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.wmhggdj5.fasta [01:44:02] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.y49c1cyv, fragments:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_1/hmmalign.frag.wk_j1ax0.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.2talgieo.fasta [01:44:02] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_3. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.m5gc95ls.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:02] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_4. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.nho6k1qe.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:03] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_1. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.o8u7nlia.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:574: DeprecationWarning: 'U' mode is deprecated handle = open(path, 'rU') /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_0/hmmalign.results.ypzignad' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:03] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_0/hmmalign.results.ypzignad) into base alignment (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.o8u7nlia.fasta). [01:44:03] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_6. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.cjipfxr2.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:03] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.backbone.yb_kv3tv.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.tree.6900w5fs.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.0.3ilhj6yg.fasta, output:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.0.3ilhj6yg.jplace [01:44:04] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_7. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.0z543khm.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:04] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_8. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.wx6k3cdw.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:05] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_10. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input._1rhn1uk.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:05] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_9. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input.8uoo4wjb.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:05] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_5. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.c_45fxv0.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_0/hmmalign.results.hjvr35zm' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:05] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_0/hmmalign.results.hjvr35zm) into base alignment (/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.c_45fxv0.fasta). [01:44:06] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_15. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.c_c_get5.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:06] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.backbone.bj137ycu.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.tree.gtl3lwsy.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.extended.0.cr83t7ce.fasta, output:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.extended.0.cr83t7ce.jplace [01:44:06] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_16. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input._0_rb5di.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:07] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_2. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.rz7pmmvh.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_0/hmmalign.results.92lh8g35' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:07] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_0/hmmalign.results.92lh8g35) into base alignment (/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.rz7pmmvh.fasta). [01:44:07] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.backbone.jib23jei.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.tree.ur2kkt2_.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.extended.0.2wuj366a.fasta, output:/tmp/sepp/output.zsliazi_/root/P_2/pplacer.extended.0.2wuj366a.jplace [01:44:07] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_14. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input._sjbjcsi.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_0/hmmalign.results.g_ik2p3k' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:07] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_0/hmmalign.results.g_ik2p3k) into base alignment (/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input._sjbjcsi.fasta). [01:44:07] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_11. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.1b_12gfu.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.results.g0lfsqnr' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:08] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.results.g0lfsqnr) into base alignment (/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.1b_12gfu.fasta). [01:44:08] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_14/pplacer.backbone.ezb9zzys.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_14/pplacer.tree.aiy0n4_6.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_14/pplacer.extended.0.z_i0xrrc.fasta, output:/tmp/sepp/output.zsliazi_/root/P_14/pplacer.extended.0.z_i0xrrc.jplace [01:44:08] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_13. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.wmhggdj5.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_0/hmmalign.results.73hypwzk' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:08] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_0/hmmalign.results.73hypwzk) into base alignment (/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.wmhggdj5.fasta). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_1/hmmalign.results.fxscjz47' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:08] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_1/hmmalign.results.fxscjz47) into base alignment (/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.wmhggdj5.fasta). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_2/hmmalign.results.gae0z7kr' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:08] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_2/hmmalign.results.gae0z7kr) into base alignment (/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.wmhggdj5.fasta). [01:44:08] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.backbone.2ej8c23g.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.tree.05estq45.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.extended.0.so1d37x0.fasta, output:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.extended.0.so1d37x0.jplace [01:44:09] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_12. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.2talgieo.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_0/hmmalign.results.t52e7g69' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:09] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_0/hmmalign.results.t52e7g69) into base alignment (/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.2talgieo.fasta). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_1/hmmalign.results.t3hqgapk' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:09] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_1/hmmalign.results.t3hqgapk) into base alignment (/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.2talgieo.fasta). [01:44:09] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.backbone._np6ljnr.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.tree.qox6k62j.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.extended.0.4dnooapg.fasta, output:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.extended.0.4dnooapg.jplace [01:44:09] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.backbone.6d5vpicp.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.tree.ve_ozb0a.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.extended.1.lqw3pjek.fasta, output:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.extended.1.lqw3pjek.jplace [01:44:09] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.backbone.kx812kne.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.tree.jsjgoxa5.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.extended.2.9pkau2z7.fasta, output:/tmp/sepp/output.zsliazi_/root/P_13/pplacer.extended.2.9pkau2z7.jplace [01:44:09] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.backbone.1dalom8u.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.tree.mwk8yg5o.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.extended.0.x2ydolr0.fasta, output:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.extended.0.x2ydolr0.jplace [01:44:10] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.backbone.ez5sag3s.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.tree.dsms_ae_.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.extended.1.zums9q9b.fasta, output:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.extended.1.zums9q9b.jplace [01:44:15] jobs.py (line 131): INFO: Finished jsonmerger Job with input: input:pipe output:/tmp/tmpyas7pnp2/output_placement.json [01:44:15] algorithm.py (line 195): INFO: Current execution Finished in 46 seconds [01:44:15] algorithm.py (line 197): INFO: All checkpointed executions Finished in 180 cumulative time /tmp/tmp.0KK4bnmz77/test/unittest/testMidpoint.py:27: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> self.x.options.alignment_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testMidpoint.py:30: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info' mode='r' encoding='UTF-8'> self.x.options.info_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testMidpoint.py:34: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> self.x.options.tree_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback ok test_fake_jobs (testSepp.Test) ... /tmp/tmp.0KK4bnmz77/test/unittest/testSepp.py:28: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> self.x.options.alignment_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testSepp.py:31: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info' mode='r' encoding='UTF-8'> self.x.options.info_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testSepp.py:35: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> self.x.options.tree_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/test/unittest/testSepp.py:83: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/input_fragments.fasta' mode='r' encoding='UTF-8'> self.x.options.fragment_file = open( ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:15] algorithm.py (line 258): INFO: Reading input alignment: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> [01:44:15] algorithm.py (line 265): INFO: Reading input tree: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> [01:44:15] algorithm.py (line 238): INFO: Decomposition Sizes are set to alignment: 40 placement: 40 [01:44:15] exhaustive.py (line 350): INFO: Breaking into 19 placement subsets. [01:44:15] exhaustive.py (line 397): INFO: Breaking into 19 alignment subsets. [01:44:15] exhaustive.py (line 412): INFO: Breaking each alignment subset into 32 fragment chunks. [01:44:33] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.u5jtmu7n.fasta [01:44:33] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input.3juql83f.fasta [01:44:33] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.57poura1.fasta [01:44:33] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input._jmdhvti.fasta [01:44:33] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.32k_b5gg.fasta [01:44:33] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.9ize5nb0.fasta [01:44:33] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input.bn5usk6v.fasta [01:44:33] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.8hr057rj.fasta [01:44:34] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.bydzaicb.fasta [01:44:34] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.h8wjzoa2.fasta [01:44:34] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.input.70ro81ua.fasta [01:44:34] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.qiyep4gj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:34] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.7ub8ibqm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:35] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.4utt14ht, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:35] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.vhnckom7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:35] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.di2agj9y, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:35] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.input.s_noft03.fasta [01:44:35] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.18q3svsg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:35] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.tgomiim1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:35] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.td93sygf, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:35] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.w0nk5ops.fasta [01:44:35] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.vrluv63o.fasta [01:44:35] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.voswh2in.fasta [01:44:35] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.i02m83hq.fasta [01:44:35] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.avthoq9s, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:35] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model._l3r4a1b, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:35] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.kty4mqd0.fasta [01:44:35] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.utylp038.fasta [01:44:35] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.a4ybbpk4.fasta [01:44:36] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.em3jfn5m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:36] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.m0s5t3bz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:36] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.1l_61asw, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:36] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.4ulofqds, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:36] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.z94d2lwq, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:36] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.5_f4euvm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:36] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.2e3sce1l, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:36] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ydjfqo1q, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:36] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.o1l5mzqw, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0ocr73lqo.fasta, elim:99999999, filter:False, output:Piped [01:44:36] exhaustive.py (line 80): WARNING: Fragments [] are not scored against any subset [01:44:36] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_0. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:293: DeprecationWarning: 'U' mode is deprecated file_obj = open(filename, 'rU') /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.57poura1.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:37] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.m0s5t3bz, fragments:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.frag.id7bcv68.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.vrluv63o.fasta [01:44:37] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_1. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.h8wjzoa2.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:37] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_2. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.voswh2in.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:38] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_3. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.i02m83hq.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:38] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_4. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.u5jtmu7n.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:38] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_5. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.a4ybbpk4.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:38] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_6. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.8hr057rj.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:39] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_7. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.32k_b5gg.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:39] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_8. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.utylp038.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:39] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_9. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input._jmdhvti.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:40] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_12. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.bydzaicb.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:40] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_13. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.9ize5nb0.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:40] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_10. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input.bn5usk6v.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:40] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_14. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.w0nk5ops.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:41] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_15. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.kty4mqd0.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:41] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_16. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input.3juql83f.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:41] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_17. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.input.s_noft03.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:41] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_18. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.input.70ro81ua.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:42] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_11. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.vrluv63o.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:574: DeprecationWarning: 'U' mode is deprecated handle = open(path, 'rU') /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.results.67ngehjt' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:44:42] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.results.67ngehjt) into base alignment (/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.vrluv63o.fasta). [01:44:42] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.backbone.n86ctkjp.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.tree.vwbmambg.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.extended.0.p_dlfvic.fasta, output:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.extended.0.p_dlfvic.jplace [01:44:46] jobs.py (line 131): INFO: Finished jsonmerger Job with input: input:pipe output:/tmp/tmp1wtytp0o/output_placement.json [01:44:46] algorithm.py (line 195): INFO: Current execution Finished in 31 seconds [01:44:46] algorithm.py (line 197): INFO: All checkpointed executions Finished in 212 cumulative time ok test_id_collision_collision (testSepp.Test) ... [01:44:46] algorithm.py (line 258): INFO: Reading input alignment: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> [01:44:46] algorithm.py (line 265): INFO: Reading input tree: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> [01:44:46] algorithm.py (line 238): INFO: Decomposition Sizes are set to alignment: 40 placement: 40 [01:44:46] exhaustive.py (line 350): INFO: Breaking into 19 placement subsets. [01:44:46] exhaustive.py (line 397): INFO: Breaking into 19 alignment subsets. ok test_id_collision_working (testSepp.Test) ... [01:44:46] algorithm.py (line 258): INFO: Reading input alignment: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> [01:44:46] algorithm.py (line 265): INFO: Reading input tree: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> [01:44:46] algorithm.py (line 238): INFO: Decomposition Sizes are set to alignment: 40 placement: 40 [01:44:47] exhaustive.py (line 350): INFO: Breaking into 19 placement subsets. [01:44:47] exhaustive.py (line 397): INFO: Breaking into 19 alignment subsets. [01:44:47] exhaustive.py (line 412): INFO: Breaking each alignment subset into 32 fragment chunks. [01:45:03] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.ba8zup0_.fasta [01:45:03] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.0m2jq82w.fasta [01:45:05] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.qjwpsr08.fasta [01:45:05] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input.ej0d5qnt.fasta [01:45:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.h94_92ps, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:05] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.h94_92ps, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.h94_92ps, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:06] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.vbso0dmt.fasta [01:45:06] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.h94_92ps, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:06] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.ybn1onu0.fasta [01:45:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.h94_92ps, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.h94_92ps, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.h94_92ps, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.p5_28itm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.p5_28itm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:07] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.smb7bcg7.fasta [01:45:07] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.p5_28itm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:07] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.yyy5obdg.fasta [01:45:07] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.input.pf99dngb.fasta [01:45:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.p5_28itm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:08] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.2sw__8h0.fasta [01:45:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.h94_92ps, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:08] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.kano93z3.fasta [01:45:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.h94_92ps, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.p5_28itm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u6ivae2l, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.p5_28itm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:08] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.u_mef2jj.fasta [01:45:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.p5_28itm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:08] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.p5_28itm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.p5_28itm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.p5_28itm, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:09] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.h94_92ps, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:10] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input.l5hmumgl.fasta [01:45:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u6ivae2l, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u6ivae2l, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.exjpaknb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:10] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input._gnv8knt.fasta [01:45:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.exjpaknb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.exjpaknb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:10] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.qu1u8t9y.fasta [01:45:10] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.input.twi6nhvo.fasta [01:45:10] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.exjpaknb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:11] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.v4vtavyp.fasta [01:45:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u6ivae2l, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.exjpaknb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.exjpaknb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.exjpaknb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:11] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.v1482fej.fasta [01:45:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u6ivae2l, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:11] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u6ivae2l, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.zazunrzg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.zazunrzg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.exjpaknb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.exjpaknb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.z7um22pk, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.zazunrzg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:12] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.z7um22pk, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.zazunrzg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u6ivae2l, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u6ivae2l, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.zazunrzg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u6ivae2l, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:13] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input._9l7n16h.fasta [01:45:13] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.z7um22pk, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.zazunrzg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.z7um22pk, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.6ehvy3in, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.z7um22pk, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.z7um22pk, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.z7um22pk, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.z7um22pk, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.z7um22pk, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:14] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.zazunrzg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.z7um22pk, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.6ehvy3in, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:15] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.el6dr6dn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.6ehvy3in, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.el6dr6dn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.zazunrzg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.6ehvy3in, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.zazunrzg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.u6ivae2l, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.6ehvy3in, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.6ehvy3in, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.el6dr6dn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.el6dr6dn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.el6dr6dn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.exjpaknb, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:16] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.6ehvy3in, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:17] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:17] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.zazunrzg, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:17] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.6ehvy3in, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:17] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.6ehvy3in, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:17] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.el6dr6dn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:17] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.el6dr6dn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:17] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:17] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.el6dr6dn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:18] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:18] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.el6dr6dn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:18] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.el6dr6dn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:18] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:18] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:18] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.6ehvy3in, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:18] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:18] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:18] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:18] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.7jfoak6v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.7jfoak6v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.7jfoak6v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.7jfoak6v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.7jfoak6v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:19] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.7jfoak6v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:20] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:20] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:20] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:20] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.espj5hnz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:20] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.espj5hnz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:20] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.7jfoak6v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:20] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.7jfoak6v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:21] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.7jfoak6v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:21] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.7jfoak6v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:21] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.espj5hnz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:21] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.espj5hnz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:21] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.espj5hnz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:21] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.pqesa5k5, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:21] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.pqesa5k5, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:21] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.espj5hnz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:22] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.espj5hnz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:22] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.kwsfnrla, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:22] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.pqesa5k5, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:22] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.espj5hnz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:22] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.pqesa5k5, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:22] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.pqesa5k5, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:22] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.pqesa5k5, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:22] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.pqesa5k5, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:22] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.pqesa5k5, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:23] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.kwsfnrla, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:23] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.kwsfnrla, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:23] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.q5ld99zn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:23] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.q5ld99zn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:23] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.kwsfnrla, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:23] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.kwsfnrla, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:23] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.pqesa5k5, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:23] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.q5ld99zn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:23] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.espj5hnz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:23] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.pqesa5k5, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:24] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.kwsfnrla, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:24] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.kwsfnrla, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:24] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.q5ld99zn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:24] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.espj5hnz, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:24] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.kwsfnrla, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:24] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.q5ld99zn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:24] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.q5ld99zn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:24] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.fqino7yt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:25] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.q5ld99zn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:25] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.kwsfnrla, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:25] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.fqino7yt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:26] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.fqino7yt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:26] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.q5ld99zn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:26] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.fqino7yt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:26] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.fqino7yt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:26] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.q5ld99zn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:26] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.fqino7yt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:26] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.fqino7yt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:26] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.kwsfnrla, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:26] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:26] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:27] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:27] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:27] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.fqino7yt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:27] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.q5ld99zn, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:27] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:27] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.fqino7yt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:27] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:27] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.2y4upngo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:27] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:27] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:27] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.fqino7yt, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.2y4upngo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.fb6umhfs, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.fb6umhfs, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_1_sbn72x1.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.2y4upngo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.2y4upngo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_9k0jdkqt1.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.fb6umhfs, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.2y4upngo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.fb6umhfs, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.2y4upngo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.2y4upngo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_4aruqkrs8.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.2y4upngo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.2y4upngo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_3wrv_zhg4.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.fb6umhfs, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0zp5g_3ll.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.2y4upngo, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.fb6umhfs, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_6uvz2tbs5.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.fb6umhfs, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_75lk9absu.fasta, elim:99999999, filter:False, output:Piped [01:45:28] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.fb6umhfs, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_2_b2nvi8f.fasta, elim:99999999, filter:False, output:Piped [01:45:29] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.fb6umhfs, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_85lxtubxi.fasta, elim:99999999, filter:False, output:Piped [01:45:29] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.fb6umhfs, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_5nf8fw6yg.fasta, elim:99999999, filter:False, output:Piped [01:45:29] exhaustive.py (line 80): WARNING: Fragments [] are not scored against any subset [01:45:29] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_0/hmmalign.frag._xcr3aau.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.kano93z3.fasta [01:45:29] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.f9grv3f8, fragments:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_1/hmmalign.frag.426svka0.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.kano93z3.fasta [01:45:29] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_0/hmmalign.frag.8_aqqm14.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.v4vtavyp.fasta [01:45:29] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_0/hmmalign.frag.izrkxwny.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.yyy5obdg.fasta [01:45:29] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.bq_7jfwx, fragments:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_1/hmmalign.frag.k3ymwn8y.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.yyy5obdg.fasta [01:45:29] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.z7um22pk, fragments:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_0/hmmalign.frag._jrsyeo5.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.ybn1onu0.fasta [01:45:29] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.8iy1__ow, fragments:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_1/hmmalign.frag.j8fpnno6.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.v4vtavyp.fasta [01:45:29] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_0. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:293: DeprecationWarning: 'U' mode is deprecated file_obj = open(filename, 'rU') [01:45:30] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.exjpaknb, fragments:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_0/hmmalign.frag.r2kjz64c.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.qjwpsr08.fasta /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.qu1u8t9y.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:30] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.espj5hnz, fragments:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_0/hmmalign.frag.uisya3na.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.u_mef2jj.fasta [01:45:30] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.zazunrzg, fragments:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.frag.ue1h7fii.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.vbso0dmt.fasta [01:45:30] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_3. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.ba8zup0_.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:30] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_2. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input._9l7n16h.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:31] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_1. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.kano93z3.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:574: DeprecationWarning: 'U' mode is deprecated handle = open(path, 'rU') /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_0/hmmalign.results.t766lr_z' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:31] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_0/hmmalign.results.t766lr_z) into base alignment (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.kano93z3.fasta). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_1/hmmalign.results.3sa7ujj5' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:31] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_1/hmmalign.results.3sa7ujj5) into base alignment (/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.kano93z3.fasta). [01:45:31] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_8. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.2sw__8h0.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:31] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.backbone._cbs7vop.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.tree.981bqtnf.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.0.zy9u55yn.fasta, output:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.0.zy9u55yn.jplace [01:45:31] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.backbone.2hduhrh5.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.tree.nm2w0v3w.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.1.bw9wrsti.fasta, output:/tmp/sepp/output.zsliazi_/root/P_1/pplacer.extended.1.bw9wrsti.jplace [01:45:32] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_9. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input.ej0d5qnt.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:32] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_10. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input._gnv8knt.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:32] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_4. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.yyy5obdg.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_0/hmmalign.results.hsa9oe7y' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:32] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_0/hmmalign.results.hsa9oe7y) into base alignment (/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.yyy5obdg.fasta). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_1/hmmalign.results.rouhnf1x' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:32] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_1/hmmalign.results.rouhnf1x) into base alignment (/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.yyy5obdg.fasta). [01:45:33] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_13. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.0m2jq82w.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:33] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.backbone.zufo_ey0.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.tree.pfjaq4qj.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.extended.1.a0emgb3o.fasta, output:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.extended.1.a0emgb3o.jplace [01:45:33] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.backbone.f9m3ay3_.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.tree.rq4r1ygf.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.extended.0.vawmmqkg.fasta, output:/tmp/sepp/output.zsliazi_/root/P_4/pplacer.extended.0.vawmmqkg.jplace [01:45:33] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_7. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.ybn1onu0.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_0/hmmalign.results.t9andren' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:33] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_0/hmmalign.results.t9andren) into base alignment (/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.ybn1onu0.fasta). [01:45:34] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_5. [01:45:34] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_7/pplacer.backbone.f5w3eouy.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_7/pplacer.tree.5o1klrdg.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_7/pplacer.extended.0.fsmiih5j.fasta, output:/tmp/sepp/output.zsliazi_/root/P_7/pplacer.extended.0.fsmiih5j.jplace /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.v4vtavyp.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_0/hmmalign.results.lxiu8hax' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:34] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_0/hmmalign.results.lxiu8hax) into base alignment (/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.v4vtavyp.fasta). /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_1/hmmalign.results.iddefnny' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:34] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_1/hmmalign.results.iddefnny) into base alignment (/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.v4vtavyp.fasta). [01:45:34] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_6. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.qjwpsr08.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_0/hmmalign.results.q5ydw471' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:34] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_0/hmmalign.results.q5ydw471) into base alignment (/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.qjwpsr08.fasta). [01:45:35] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.backbone.o3xfji8w.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.tree.ahcc3voj.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.extended.0.kbs7laps.fasta, output:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.extended.0.kbs7laps.jplace [01:45:35] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.backbone.deoj2_md.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.tree.pthj1rnm.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.extended.1.grbwxhpo.fasta, output:/tmp/sepp/output.zsliazi_/root/P_5/pplacer.extended.1.grbwxhpo.jplace [01:45:35] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_14. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.smb7bcg7.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:35] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.backbone.hgnlrjm1.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.tree.knkunjb1.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.extended.0.4cv7a86k.fasta, output:/tmp/sepp/output.zsliazi_/root/P_6/pplacer.extended.0.4cv7a86k.jplace [01:45:36] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_16. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input.l5hmumgl.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:36] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_17. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.input.twi6nhvo.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:36] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_15. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.v1482fej.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:36] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_18. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.input.pf99dngb.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:37] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_12. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.u_mef2jj.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_0/hmmalign.results.2e92m_pe' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:37] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_0/hmmalign.results.2e92m_pe) into base alignment (/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.u_mef2jj.fasta). [01:45:37] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_11. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.vbso0dmt.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.results.0hptrlxg' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:45:37] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.results.0hptrlxg) into base alignment (/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.vbso0dmt.fasta). [01:45:37] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.backbone.tua879cd.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.tree.aqhzelxk.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.extended.0.f2zevtwl.fasta, output:/tmp/sepp/output.zsliazi_/root/P_12/pplacer.extended.0.f2zevtwl.jplace [01:45:38] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.backbone.76gfaoy9.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.tree.ewttfxuz.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.extended.0.ufnbqcyr.fasta, output:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.extended.0.ufnbqcyr.jplace [01:45:43] jobs.py (line 131): INFO: Finished jsonmerger Job with input: input:pipe output:/tmp/tmp5o_ex4wx/output_placement.json [01:45:43] algorithm.py (line 195): INFO: Current execution Finished in 56 seconds [01:45:43] algorithm.py (line 197): INFO: All checkpointed executions Finished in 269 cumulative time ok test_notpiped_jobs (testSepp.Test) ... [01:45:43] algorithm.py (line 258): INFO: Reading input alignment: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> [01:45:43] algorithm.py (line 265): INFO: Reading input tree: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> [01:45:43] algorithm.py (line 238): INFO: Decomposition Sizes are set to alignment: 40 placement: 40 [01:45:43] exhaustive.py (line 350): INFO: Breaking into 19 placement subsets. [01:45:44] exhaustive.py (line 397): INFO: Breaking into 19 alignment subsets. [01:45:44] exhaustive.py (line 412): INFO: Breaking each alignment subset into 32 fragment chunks. [01:45:59] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.5vs6o58z.fasta [01:45:59] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.askwz8z1.fasta [01:45:59] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.input.ifmsbq2e.fasta [01:46:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.03s666s3.fasta [01:46:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.28_q07na.fasta [01:46:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.i5fkcayi.fasta [01:46:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.b2my0xel.fasta [01:46:00] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.8072j6ai.fasta [01:46:00] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.model.0g_w_ugd, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/FC_3_0_0/hmmsearch.results.kly1qg1n [01:46:01] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.r1r90jy0.fasta [01:46:01] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.input.d3hm1nyw.fasta [01:46:01] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input.9fou38j1.fasta [01:46:01] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.model.1xgh9ipj, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/FC_12_0_0/hmmsearch.results.nf6ho3mj [01:46:01] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.35i114xx.fasta [01:46:01] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.jpfyvoec.fasta [01:46:01] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.4feytjou.fasta [01:46:02] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.lo1zjy95.fasta [01:46:02] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.y156qvuh.fasta [01:46:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.model.mc6tl4lk, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/FC_2_0_0/hmmsearch.results.fadgnfz_ [01:46:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.model.uutn1_j8, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/FC_6_0_0/hmmsearch.results.escrssly [01:46:02] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input.o0fxp84p.fasta [01:46:02] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input.76mu2q38.fasta [01:46:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.model.gv6zewot, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/FC_9_0_0/hmmsearch.results.wal3hn3r [01:46:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.model.5kpz4r6q, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/FC_7_0_0/hmmsearch.results.02i0fldw [01:46:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.model.y8ndy2o2, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/FC_18_0_0/hmmsearch.results.3sxi50sv [01:46:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.model.h8045k1h, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/FC_17_0_0/hmmsearch.results.d42regyy [01:46:02] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.model.os1vmcd4, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/FC_0_0_0/hmmsearch.results._zldwvn7 [01:46:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.model.hvafe1xp, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/FC_13_0_0/hmmsearch.results.uzsb9r80 [01:46:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.model.vtye4n3r, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/FC_1_0_0/hmmsearch.results.z7l4uf07 [01:46:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.model.ggfso3ud, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/FC_15_0_0/hmmsearch.results.ss1q83ds [01:46:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.model.znurz46m, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/FC_8_0_0/hmmsearch.results.pn20hs2e [01:46:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.model.4k3kvxs7, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/FC_4_0_0/hmmsearch.results.9z1l2zph [01:46:03] jobs.py (line 131): INFO: Finished hmmbuild Job with input: /tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.hb9eu_r4.fasta [01:46:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.model.kg0r582v, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/FC_14_0_0/hmmsearch.results._wfar0ol [01:46:03] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.5vrqk4o1, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmsearch.results.st9rjx7e [01:46:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.model.k1zzw_zc, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/FC_16_0_0/hmmsearch.results.qa8w216y [01:46:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.model.2x_8jij0, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/FC_10_0_0/hmmsearch.results.6b_4u76l [01:46:04] jobs.py (line 131): INFO: Finished hmmsearch Job with input: model:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.model.h2p_qn2n, fragments:/tmp/sepp/output.zsliazi_/fragment_chunks/fragment_chunk_0z1r2ckzs.fasta, elim:99999999, filter:False, output:/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/FC_5_0_0/hmmsearch.results.axbj_gyv [01:46:04] exhaustive.py (line 80): WARNING: Fragments [] are not scored against any subset [01:46:04] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_1. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:293: DeprecationWarning: 'U' mode is deprecated file_obj = open(filename, 'rU') /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_1/A_1_0/hmmbuild.input.b2my0xel.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:04] jobs.py (line 131): INFO: Finished hmmalign Job with input: model:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.model.5vrqk4o1, fragments:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.frag.ore_9n08.fasta, trim:False, base_alignment:/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.lo1zjy95.fasta [01:46:04] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_0. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_0/A_0_0/hmmbuild.input.8072j6ai.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:05] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_2. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_2/A_2_0/hmmbuild.input.i5fkcayi.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:05] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_3. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_3/A_3_0/hmmbuild.input.5vs6o58z.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:05] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_4. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_4/A_4_0/hmmbuild.input.4feytjou.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:05] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_5. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_5/A_5_0/hmmbuild.input.hb9eu_r4.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:06] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_6. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_6/A_6_0/hmmbuild.input.03s666s3.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:06] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_7. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_7/A_7_0/hmmbuild.input.r1r90jy0.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:06] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_8. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_8/A_8_0/hmmbuild.input.y156qvuh.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:06] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_9. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_9/A_9_0/hmmbuild.input.9fou38j1.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:07] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_10. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_10/A_10_0/hmmbuild.input.o0fxp84p.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:07] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_14. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_14/A_14_0/hmmbuild.input.jpfyvoec.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:07] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_12. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_12/A_12_0/hmmbuild.input.askwz8z1.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:07] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_13. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_13/A_13_0/hmmbuild.input.28_q07na.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:08] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_15. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_15/A_15_0/hmmbuild.input.35i114xx.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:08] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_16. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_16/A_16_0/hmmbuild.input.76mu2q38.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:08] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_17. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_17/A_17_0/hmmbuild.input.d3hm1nyw.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:08] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_18. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_18/A_18_0/hmmbuild.input.ifmsbq2e.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:09] exhaustive.py (line 151): INFO: Merging sub-alignments for placement problem : P_11. /tmp/tmp.0KK4bnmz77/sepp/alignment.py:544: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.lo1zjy95.fasta' mode='rU' encoding='UTF-8'> self.read_filepath(base_alignment, "FASTA") ResourceWarning: Enable tracemalloc to get the object allocation traceback /tmp/tmp.0KK4bnmz77/sepp/alignment.py:574: DeprecationWarning: 'U' mode is deprecated handle = open(path, 'rU') /tmp/tmp.0KK4bnmz77/sepp/alignment.py:555: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.results.fcagzpu1' mode='rU' encoding='UTF-8'> ext.read_extended_alignment(path) ResourceWarning: Enable tracemalloc to get the object allocation traceback [01:46:09] alignment.py (line 556): INFO: Merging extension sto file (/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/FC_11_0_0/hmmalign.results.fcagzpu1) into base alignment (/tmp/sepp/output.zsliazi_/root/P_11/A_11_0/hmmbuild.input.lo1zjy95.fasta). [01:46:09] jobs.py (line 131): INFO: Finished pplacer Job with input: backbone_alignment_file:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.backbone._4y3yv_j.fasta, tree_file:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.tree.13vgwqzv.tre, info_file:/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info, extended alignment:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.extended.0.41cq0vub.fasta, output:/tmp/sepp/output.zsliazi_/root/P_11/pplacer.extended.0.41cq0vub.jplace [01:46:13] jobs.py (line 131): INFO: Finished jsonmerger Job with input: input:pipe output:/tmp/tmp0cp0lrai/output_placement.json [01:46:13] algorithm.py (line 195): INFO: Current execution Finished in 29 seconds [01:46:13] algorithm.py (line 197): INFO: All checkpointed executions Finished in 299 cumulative time ok test_seqnames_whitespaces (testSepp.Test) ... [01:46:13] algorithm.py (line 258): INFO: Reading input alignment: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta' mode='r' encoding='UTF-8'> [01:46:13] algorithm.py (line 265): INFO: Reading input tree: <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk' mode='r' encoding='UTF-8'> [01:46:13] algorithm.py (line 238): INFO: Decomposition Sizes are set to alignment: 40 placement: 40 [01:46:13] exhaustive.py (line 350): INFO: Breaking into 19 placement subsets. [01:46:13] exhaustive.py (line 397): INFO: Breaking into 19 alignment subsets. ok ---------------------------------------------------------------------- Ran 20 tests in 302.293s OK sys:1: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp.0KK4bnmz77/test/unittest/data/configs/test2.config' mode='r' encoding='UTF-8'> make[1]: Leaving directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild debian/rules override_dh_auto_install make[1]: Entering directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' dh_auto_install I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp running install running build running build_py running build_scripts running install_lib creating /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr creating /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib creating /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9 creating /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages creating /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/__init__.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/exhaustive_tipp.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/exhaustive.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/jobs.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/alignment.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/ensemble.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/decompose_tree.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/exhaustive_upp.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/problem.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/checkpointing.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/math_utils.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/tree.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/scheduler.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/algorithm.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/filemgr.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/config.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/metagenomics.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp copying /build/sepp-mioLzI/sepp-4.3.10+dfsg/.pybuild/cpython3_3.9/build/sepp/scratch.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/__init__.py to __init__.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/exhaustive_tipp.py to exhaustive_tipp.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/exhaustive.py to exhaustive.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/jobs.py to jobs.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/alignment.py to alignment.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/ensemble.py to ensemble.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/decompose_tree.py to decompose_tree.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/exhaustive_upp.py to exhaustive_upp.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/problem.py to problem.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/checkpointing.py to checkpointing.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/math_utils.py to math_utils.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/tree.py to tree.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/scheduler.py to scheduler.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/algorithm.py to algorithm.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/filemgr.py to filemgr.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/config.py to config.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/metagenomics.py to metagenomics.cpython-39.pyc byte-compiling /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp/scratch.py to scratch.cpython-39.pyc running install_data copying home.path -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/ running install_egg_info running egg_info creating sepp.egg-info writing sepp.egg-info/PKG-INFO writing dependency_links to sepp.egg-info/dependency_links.txt writing requirements to sepp.egg-info/requires.txt writing top-level names to sepp.egg-info/top_level.txt writing manifest file 'sepp.egg-info/SOURCES.txt' reading manifest file 'sepp.egg-info/SOURCES.txt' writing manifest file 'sepp.egg-info/SOURCES.txt' Copying sepp.egg-info to /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/lib/python3.9/dist-packages/sepp-4.3.10.egg-info Skipping SOURCES.txt running install_scripts creating /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin copying build/scripts-3.9/run_tipp.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin copying build/scripts-3.9/run_sepp.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin copying build/scripts-3.9/run_abundance.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin copying build/scripts-3.9/run_tipp_tool.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin copying build/scripts-3.9/run_upp.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin copying build/scripts-3.9/split_sequences.py -> /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin changing mode of /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin/run_tipp.py to 755 changing mode of /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin/run_sepp.py to 755 changing mode of /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin/run_abundance.py to 755 changing mode of /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin/run_tipp_tool.py to 755 changing mode of /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin/run_upp.py to 755 changing mode of /build/sepp-mioLzI/sepp-4.3.10+dfsg/debian/sepp/usr/bin/split_sequences.py to 755 # Deleting upstream configuration file, which we are not packaging. rm -f debian/sepp/usr/home.path # Moving split_sequences into the subdirectory /usr/share/sepp/util, as it is # not really part of the software but instead a helper script. mkdir -p debian/sepp/usr/share/sepp mv debian/sepp/usr/bin/split_sequences.py debian/sepp/usr/share/sepp # Not installing upp for now. rm -f debian/sepp/usr/bin/run_upp.py make[1]: Leaving directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' dh_install -a -O--buildsystem=pybuild dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' dh_installman --language=C make[1]: Leaving directory '/build/sepp-mioLzI/sepp-4.3.10+dfsg' dh_python3 -a -O--buildsystem=pybuild dh_installsystemduser -a -O--buildsystem=pybuild dh_lintian -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -a -O--buildsystem=pybuild dh_strip -a -a -O--buildsystem=pybuild dh_makeshlibs -a -a -O--buildsystem=pybuild dh_shlibdeps -a -a -O--buildsystem=pybuild dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package sepp: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'sepp' in '../sepp_4.3.10+dfsg-5_amd64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../sepp_4.3.10+dfsg-5_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/sepp-mioLzI /tmp/sepp-4.3.10+dfsg-50mvjhsm0 I: cleaning package lists and apt cache... W: deleting files in /tmp: sepp W: deleting files in /tmp: tmp.0KK4bnmz77 W: deleting files in /tmp: hsperfdata_builduser W: deleting files in /tmp: tmp8xevmo_3 W: deleting files in /tmp: tmpqvhybf6g W: deleting files in /tmp: hsperfdata_root W: deleting files in /tmp: tmpblkyxzex I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.AkVNGw4c1Y... I: success in 877.2125 seconds md5: sepp_4.3.10+dfsg-5_amd64.deb: OK sha1: sepp_4.3.10+dfsg-5_amd64.deb: OK sha256: sepp_4.3.10+dfsg-5_amd64.deb: OK Checksums: OK