Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/r/r-cran-glmmtmb/r-cran-glmmtmb_1.0.2.1-1+b1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/r-cran-glmmtmb-1.0.2.1-1+b11sm18ur7/r-cran-glmmtmb_1.0.2.1-1+b1_amd64.buildinfo Get source package info: r-cran-glmmtmb=1.0.2.1-1 Source URL: http://snapshot.notset.fr/mr/package/r-cran-glmmtmb/1.0.2.1-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-14 automake=1:1.16.3-2 autopoint=0.21-3 autotools-dev=20180224.1+nmu1 base-files=11 base-passwd=3.5.48 bash=5.1-2 binutils=2.35.1-7 binutils-common=2.35.1-7 binutils-x86-64-linux-gnu=2.35.1-7 bsdextrautils=2.36.1-6 bsdutils=1:2.36.1-6 build-essential=12.9 bzip2=1.0.8-4 ca-certificates=20210119 coreutils=8.32-4+b1 cpp=4:10.2.1-1 cpp-10=10.2.1-6 dash=0.5.11+git20200708+dd9ef66-5 dctrl-tools=2.24-3+b1 debconf=1.5.74 debhelper=13.3.2 debianutils=4.11.2 dh-autoreconf=19 dh-r=20201129 dh-strip-nondeterminism=1.10.0-1 diffutils=1:3.7-5 dpkg=1.20.7.1 dpkg-dev=1.20.7.1 dwz=0.13+20210126-1 file=1:5.39-3 findutils=4.8.0-1 fontconfig=2.13.1-4.2 fontconfig-config=2.13.1-4.2 fonts-dejavu-core=2.37-2 g++=4:10.2.1-1 g++-10=10.2.1-6 gcc=4:10.2.1-1 gcc-10=10.2.1-6 gcc-10-base=10.2.1-6 gettext=0.21-3 gettext-base=0.21-3 gfortran=4:10.2.1-1 gfortran-10=10.2.1-6 grep=3.6-1 groff-base=1.22.4-6 gzip=1.10-2 hostname=3.23 icu-devtools=67.1-6 init-system-helpers=1.60 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-9 libalgorithm-c3-perl=0.11-1 libarchive-zip-perl=1.68-1 libasan6=10.2.1-6 libatomic1=10.2.1-6 libattr1=1:2.4.48-6 libaudit-common=1:3.0-2 libaudit1=1:3.0-2 libb-hooks-endofscope-perl=0.24-1.1 libb-hooks-op-check-perl=0.22-1+b3 libbinutils=2.35.1-7 libblas-dev=3.9.0-3 libblas3=3.9.0-3 libblkid1=2.36.1-6 libbrotli1=1.0.9-2+b2 libbsd0=0.10.0-1 libbz2-1.0=1.0.8-4 libbz2-dev=1.0.8-4 libc-bin=2.31-9 libc-dev-bin=2.31-9 libc6=2.31-9 libc6-dev=2.31-9 libcairo2=1.16.0-5 libcap-ng0=0.7.9-2.2+b1 libcc1-0=10.2.1-6 libclass-c3-perl=0.35-1 libclass-load-perl=0.25-1 libclass-load-xs-perl=0.10-1+b5 libcom-err2=1.45.7-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.1-7 libctf0=2.35.1-7 libcurl3-gnutls=7.74.0-1 libcurl4=7.74.0-1 libdata-optlist-perl=0.110-1.1 libdatrie1=0.2.13-1 libdb5.3=5.3.28+dfsg1-0.6 libdebconfclient0=0.256 libdebhelper-perl=13.3.2 libdeflate0=1.7-1 libdevel-callchecker-perl=0.008-1+b2 libdevel-globaldestruction-perl=0.14-1.1 libdevel-overloadinfo-perl=0.005-1 libdevel-stacktrace-perl=2.0400-1 libdist-checkconflicts-perl=0.11-1.1 libdpkg-perl=1.20.7.1 libdynaloader-functions-perl=0.003-1.1 libelf1=0.182-3 libencode-locale-perl=1.05-1.1 libeval-closure-perl=0.14-1 libexpat1=2.2.10-1 libffi7=3.3-5 libfile-stripnondeterminism-perl=1.10.0-1 libfile-which-perl=1.23-1 libfontconfig1=2.13.1-4.2 libfreetype6=2.10.4+dfsg-1 libfribidi0=1.0.8-2 libgcc-10-dev=10.2.1-6 libgcc-s1=10.2.1-6 libgcrypt20=1.8.7-2 libgdbm-compat4=1.19-2 libgdbm6=1.19-2 libgfortran-10-dev=10.2.1-6 libgfortran5=10.2.1-6 libglib2.0-0=2.66.4-3 libgmp10=2:6.2.1+dfsg-1 libgnutls30=3.7.0-5 libgomp1=10.2.1-6 libgpg-error0=1.38-2 libgraphite2-3=1.3.14-1 libgssapi-krb5-2=1.18.3-4 libharfbuzz0b=2.7.4-1 libhogweed6=3.6-2 libhttp-date-perl=6.05-1 libhttp-message-perl=6.27-1 libice6=2:1.0.10-1 libicu-dev=67.1-6 libicu67=67.1-6 libidn2-0=2.3.0-5 libio-html-perl=1.001-1.1 libisl23=0.23-1 libitm1=10.2.1-6 libjbig0=2.1-3.1+b2 libjpeg-dev=1:2.0.5-2 libjpeg62-turbo=1:2.0.5-2 libjpeg62-turbo-dev=1:2.0.5-2 libk5crypto3=1.18.3-4 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-4 libkrb5support0=1.18.3-4 liblapack-dev=3.9.0-3 liblapack3=3.9.0-3 libldap-2.4-2=2.4.57+dfsg-1 liblsan0=10.2.1-6 liblwp-mediatypes-perl=6.04-1 liblz4-1=1.9.3-1 liblzma-dev=5.2.5-1.0 liblzma5=5.2.5-1.0 libmagic-mgc=1:5.39-3 libmagic1=1:5.39-3 libmodule-implementation-perl=0.09-1.1 libmodule-runtime-conflicts-perl=0.003-1.1 libmodule-runtime-perl=0.016-1 libmoose-perl=2.2014-2 libmount1=2.36.1-6 libmpc3=1.2.0-1 libmpfr6=4.1.0-3 libmro-compat-perl=0.13-1 libnamespace-clean-perl=0.27-1 libncurses-dev=6.2+20201114-2 libncurses5-dev=6.2+20201114-2 libncurses6=6.2+20201114-2 libncursesw6=6.2+20201114-2 libnettle8=3.6-2 libnghttp2-14=1.42.0-1 libnlopt0=2.7.0-4+b2 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libp11-kit0=0.23.22-1 libpackage-deprecationmanager-perl=0.17-1.1 libpackage-stash-perl=0.39-1 libpackage-stash-xs-perl=0.29-1+b2 libpam-modules=1.4.0-2 libpam-modules-bin=1.4.0-2 libpam-runtime=1.4.0-2 libpam0g=1.4.0-2 libpango-1.0-0=1.46.2-3 libpangocairo-1.0-0=1.46.2-3 libpangoft2-1.0-0=1.46.2-3 libpaper-utils=1.1.28+b1 libpaper1=1.1.28+b1 libparams-classify-perl=0.015-1+b3 libparams-util-perl=1.102-1+b1 libpcre16-3=2:8.39-13 libpcre2-16-0=10.36-2 libpcre2-32-0=10.36-2 libpcre2-8-0=10.36-2 libpcre2-dev=10.36-2 libpcre2-posix2=10.36-2 libpcre3=2:8.39-13 libpcre3-dev=2:8.39-13 libpcre32-3=2:8.39-13 libpcrecpp0v5=2:8.39-13 libperl5.32=5.32.0-6 libpipeline1=1.5.3-1 libpixman-1-0=0.40.0-1 libpng-dev=1.6.37-3 libpng16-16=1.6.37-3 libpsl5=0.21.0-1.1 libquadmath0=10.2.1-6 libreadline-dev=8.1-1 libreadline8=8.1-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.27+dfsg-2 libsasl2-modules-db=2.1.27+dfsg-2 libseccomp2=2.5.1-1 libselinux1=3.1-2+b2 libsigsegv2=2.13-1 libsm6=2:1.2.3-1 libsmartcols1=2.36.1-6 libssh2-1=1.9.0-2 libssl1.1=1.1.1i-3 libstdc++-10-dev=10.2.1-6 libstdc++6=10.2.1-6 libsub-exporter-perl=0.987-1 libsub-exporter-progressive-perl=0.001013-1 libsub-identify-perl=0.14-1+b3 libsub-install-perl=0.928-1.1 libsub-name-perl=0.26-1+b1 libsub-override-perl=0.09-2 libswitch-perl=2.17-2.1 libsystemd0=247.2-5 libtasn1-6=4.16.0-2 libtcl8.6=8.6.11+dfsg-1 libthai-data=0.1.28-3 libthai0=0.1.28-3 libtiff5=4.2.0-1 libtimedate-perl=2.3300-1 libtinfo6=6.2+20201114-2 libtirpc-common=1.3.1-1 libtirpc-dev=1.3.1-1 libtirpc3=1.3.1-1 libtk8.6=8.6.11-1 libtool=2.4.6-15 libtry-tiny-perl=0.30-1 libtsan0=10.2.1-6 libubsan1=10.2.1-6 libuchardet0=0.0.7-1 libudev1=247.2-5 libunistring2=0.9.10-4 liburi-perl=5.06-1 libuuid1=2.36.1-6 libvariable-magic-perl=0.62-1+b3 libwebp6=0.6.1-2+b1 libwww-curl-perl=4.17-7+b1 libwww-curl-simple-perl=0.100191-2 libx11-6=2:1.7.0-2 libx11-data=2:1.7.0-2 libxau6=1:1.0.9-1 libxcb-render0=1.14-2.1 libxcb-shm0=1.14-2.1 libxcb1=1.14-2.1 libxdmcp6=1:1.1.2-3 libxext6=2:1.3.3-1.1 libxft2=2.3.2-2 libxml2=2.9.10+dfsg-6.3+b1 libxmuu1=2:1.1.2-2+b3 libxrender1=1:0.9.10-1 libxss1=1:1.2.3-1 libxt6=1:1.2.0-1 libzstd1=1.4.8+dfsg-1 linux-libc-dev=5.10.12-1 littler=0.3.12-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 ncurses-base=6.2+20201114-2 ncurses-bin=6.2+20201114-2 openssl=1.1.1i-3 patch=2.7.6-7 perl=5.32.0-6 perl-base=5.32.0-6 perl-modules-5.32=5.32.0-6 pkg-config=0.29.2-1 po-debconf=1.0.21+nmu1 r-base-core=4.0.3-1 r-base-dev=4.0.3-1 r-cran-boot=1.3-26-1 r-cran-lattice=0.20-41-1+b1 r-cran-littler=0.3.12-1 r-cran-lme4=1.1-26-1 r-cran-mass=7.3-53-1 r-cran-matrix=1.3-2-1 r-cran-minqa=1.2.4-1+b5 r-cran-nlme=3.1.151-1 r-cran-nloptr=1.2.2.2-1 r-cran-pkgkitten=0.2.0-1 r-cran-rcpp=1.0.6-1 r-cran-rcppeigen=0.3.3.9.1-1 r-cran-statmod=1.4.35-1 r-cran-tmb=1.7.18-2 readline-common=8.1-1 sed=4.7-1 sensible-utils=0.0.14 sysvinit-utils=2.96-5 tar=1.32+dfsg-1 tzdata=2021a-1 ucf=3.0043 unzip=6.0-26 util-linux=2.36.1-6 x11-common=1:7.7+21 xauth=1:1.1-1 xdg-utils=1.1.3-4 xz-utils=5.2.5-1.0 zip=3.0-11+b1 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210203T203559Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20210131T204918Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d r-cran-glmmtmb=1.0.2.1-1 && mkdir -p /build/r-cran-glmmtmb-5DX3mR && dpkg-source --no-check -x /*.dsc /build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1 && cd /build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1 && { printf '%s' 'r-cran-glmmtmb (1.0.2.1-1+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against r-cran-tmb 1.7.18, see upstream issue #615 -- amd64 / i386 Build Daemon (x86-csail-01) Mon, 01 Feb 2021 11:48:17 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/r-cran-glmmtmb-5DX3mR" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1612180097" dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/r-cran-glmmtmb-5DX3mR /tmp/r-cran-glmmtmb-1.0.2.1-1+b11sm18ur7 bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20210131T204918Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.ht2x_KPLBg as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.ht2x_KPLBg Reading package lists... Building dependency tree... util-linux is already the newest version (2.36.1-6). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20210131T204918Z unstable/main amd64 libfakeroot amd64 1.25.3-1.1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20210131T204918Z unstable/main amd64 fakeroot amd64 1.25.3-1.1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (535 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4661 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1.1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1.1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1.1_amd64.deb ... Unpacking fakeroot (1.25.3-1.1) ... Setting up libfakeroot:amd64 (1.25.3-1.1) ... Setting up fakeroot (1.25.3-1.1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-9) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210203T203559Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20210131T204918Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.ht2x_KPLBg Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Get:2 http://snapshot.notset.fr/archive/debian/20210203T203559Z unstable InRelease [153 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20210131T204918Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20210203T203559Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20210203T203559Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20210203T203559Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20210203T203559Z unstable/main amd64 Packages [11.6 MB] Fetched 34.4 MB in 30s (1138 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.ht2x_KPLBg I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d r-cran-glmmtmb=1.0.2.1-1 && mkdir -p /build/r-cran-glmmtmb-5DX3mR && dpkg-source --no-check -x /*.dsc /build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1 && cd /build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1 && { printf '%s' 'r-cran-glmmtmb (1.0.2.1-1+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against r-cran-tmb 1.7.18, see upstream issue #615 -- amd64 / i386 Build Daemon (x86-csail-01) Mon, 01 Feb 2021 11:48:17 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/r-cran-glmmtmb-5DX3mR"' exec /tmp/mmdebstrap.ht2x_KPLBg Reading package lists... NOTICE: 'r-cran-glmmtmb' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/r-pkg-team/r-cran-glmmtmb.git Please use: git clone https://salsa.debian.org/r-pkg-team/r-cran-glmmtmb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2980 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main r-cran-glmmtmb 1.0.2.1-1 (dsc) [2181 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main r-cran-glmmtmb 1.0.2.1-1 (tar) [2965 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main r-cran-glmmtmb 1.0.2.1-1 (diff) [13.2 kB] Fetched 2980 kB in 2s (1192 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'r-cran-glmmtmb_1.0.2.1-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting r-cran-glmmtmb in /build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1 dpkg-source: info: unpacking r-cran-glmmtmb_1.0.2.1.orig.tar.gz dpkg-source: info: unpacking r-cran-glmmtmb_1.0.2.1-1.debian.tar.xz I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1612180097" dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.ht2x_KPLBg dpkg-buildpackage: info: source package r-cran-glmmtmb dpkg-buildpackage: info: source version 1.0.2.1-1+b1 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by amd64 / i386 Build Daemon (x86-csail-01) dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary-arch dh binary-arch --buildsystem R dh_update_autotools_config -a -O--buildsystem=R dh_autoreconf -a -O--buildsystem=R dh_auto_configure -a -O--buildsystem=R dh_auto_build -a -O--buildsystem=R dh_auto_test -a -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=R dh_prep -a -O--buildsystem=R dh_auto_install -a -O--buildsystem=R I: R packages needed for DEP8: testthat, pscl I: R Package: glmmTMB Version: 1.0.2.1 I: Building using R version 4.0.3-1 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Mon, 01 Feb 2021 11:48:17 +0000 mkdir -p /build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1/debian/r-cran-glmmtmb/usr/lib/R/site-library R CMD INSTALL -l /build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1/debian/r-cran-glmmtmb/usr/lib/R/site-library --clean . "--built-timestamp='Mon, 01 Feb 2021 11:48:17 +0000'" * installing *source* package ‘glmmTMB’ ... ** package ‘glmmTMB’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ -std=gnu++11 accepts -g... yes checking how to run the C++ preprocessor... g++ -std=gnu++11 -E checking for g++ -std=gnu++11 option to support OpenMP... -fopenmp configure: creating ./config.status config.status: creating src/Makevars ** libs make[1]: Entering directory '/build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1/src' g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/TMB/include' -I'/usr/lib/R/site-library/RcppEigen/include' -fopenmp -DARMA_64BIT_WORD -fpic -g -O2 -fdebug-prefix-map=/build/r-base-oKyfjH/r-base-4.0.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c glmmTMB.cpp -o glmmTMB.o In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:397, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 718 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes] 741 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 764 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__m128i’} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:377, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’ 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from ‘struct Eigen::internal::traits >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__m128’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from ‘struct Eigen::internal::traits >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from ‘class Eigen::QuaternionBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from ‘class Eigen::Quaternion’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:17:8: required from ‘struct tmbutils::vector’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:45:43: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__m128i’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:17:8: required from ‘struct tmbutils::vector’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:45:43: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Array, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::Array, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::Array, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >’ /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:238:22: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 2>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 2>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 2> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, 2> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Reverse.h:63:52: required from ‘class Eigen::Reverse, 2>’ /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:247:27: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:520, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Reverse.h: In instantiation of ‘class Eigen::Reverse, 2>’: /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:247:27: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Reverse.h:85:71: warning: ignoring attributes on template argument ‘Eigen::ArrayBase, 2> >::PacketScalar’ {aka ‘__m128i’} [-Wignored-attributes] 85 | typedef internal::reverse_packet_cond reverse_packet; | ^~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:17:8: required from ‘struct tmbutils::vector’ /usr/lib/R/site-library/TMB/include/convert.hpp:52:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:17:8: required from ‘struct tmbutils::vector’ /usr/lib/R/site-library/TMB/include/convert.hpp:52:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from ‘struct Eigen::internal::traits > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from ‘class Eigen::Map >’ /usr/lib/R/site-library/TMB/include/convert.hpp:99:24: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map >’ /usr/lib/R/site-library/TMB/include/convert.hpp:99:24: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:88:8: required from ‘struct tmbutils::matrix’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:413:57: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Matrix, 0, 8>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, Eigen::Matrix, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Matrix, 0>’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:413:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PermutationMatrix.h:65:13: required from ‘class Eigen::PermutationBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PermutationMatrix.h:297:7: required from ‘class Eigen::PermutationMatrix<-1, -1, int>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:284:21: required from ‘class Eigen::PartialPivLU >’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:494:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Array, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Array >’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:494:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Array > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Array > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::CwiseUnaryOp, const Eigen::Array > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Array >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::CwiseUnaryOp, const Eigen::Array > >’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:494:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Array, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Array >’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:519:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, -1, false, true>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, -1, false, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, -1, false>’ /usr/lib/R/site-library/TMB/include/atomic_convolve.hpp:8:57: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false> >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, -1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper, -1, -1, false> >’ /usr/lib/R/site-library/TMB/include/atomic_convolve.hpp:8:57: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper >’ /usr/lib/R/site-library/TMB/include/atomic_convolve.hpp:8:57: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > >’ /usr/lib/R/site-library/TMB/include/atomic_convolve.hpp:8:57: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:88:8: required from ‘struct tmbutils::matrix’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:518:51: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >’ /usr/lib/R/site-library/TMB/include/expm.hpp:129:36: required from ‘atomic::nestedTriangle::nestedTriangle(tmbutils::vector >) [with int n = 1]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >’ /usr/lib/R/site-library/TMB/include/expm.hpp:129:36: required from ‘atomic::nestedTriangle::nestedTriangle(tmbutils::vector >) [with int n = 1]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase, 1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 1, -1, false, true>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, 1, -1, false, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, 1, -1, false>’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1093:14: required from ‘SEXPREC* EvalADFunObjectTemplate(SEXP, SEXP, SEXP) [with ADFunType = CppAD::ADFun; SEXP = SEXPREC*]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1305:64: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/TMB/include/TMB.hpp:54, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ glmmTMB.cpp:585:3: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Array, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::Array, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::Array, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >’ glmmTMB.cpp:638:28: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Array >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >’ glmmTMB.cpp:881:13: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >’ glmmTMB.cpp:881:13: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >’ glmmTMB.cpp:890:22: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >’ /usr/lib/R/site-library/TMB/include/start_parallel.hpp:217:37: required from ‘VectorBase parallelADFun::Reverse(size_t, const VectorBase&) [with VectorBase = Eigen::Matrix; Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1724:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper >’ /usr/lib/R/site-library/TMB/include/expm.hpp:30:21: required from ‘Type atomic::Block::norm() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::ArrayWrapper > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::ArrayWrapper > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::ArrayWrapper >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::ArrayWrapper > >’ /usr/lib/R/site-library/TMB/include/expm.hpp:30:27: required from ‘Type atomic::Block::norm() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::internal::member_sum, 1>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::internal::member_sum, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::internal::member_sum, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from ‘class Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>’ /usr/lib/R/site-library/TMB/include/expm.hpp:31:47: required from ‘Type atomic::Block::norm() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Matrix >’ /usr/lib/R/site-library/TMB/include/expm.hpp:18:23: required from ‘atomic::Block atomic::Block::scale(Type) [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:165:29: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Matrix, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Matrix >’ /usr/lib/R/site-library/TMB/include/expm.hpp:25:29: required from ‘atomic::Block atomic::Block::addIdentity() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:168:45: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Inverse.h:69:7: required from ‘class Eigen::InverseImpl, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Inverse.h:43:7: required from ‘class Eigen::Inverse >’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:36: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from ‘struct Eigen::internal::unary_evaluator, -1, -1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from ‘class Eigen::internal::redux_evaluator, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > >; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, -1, false> >, const Eigen::ArrayWrapper > >; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/TMB/include/atomic_convolve.hpp:8:57: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Map > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Map > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Map > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Map >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Map > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:510:38: required from ‘struct Eigen::internal::cast_return_type >, const Eigen::CwiseUnaryOp, const Eigen::Map > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from ‘struct Eigen::MatrixBase > >::CastXpr’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of ‘template typename Eigen::MatrixBase > >::CastXpr::Type Eigen::MatrixBase > >::cast() const [with NewType = int]’ /usr/lib/R/site-library/TMB/include/convert.hpp:99:35: required from ‘tmbutils::vector asVector(SEXP) [with Type = int; SEXP = SEXPREC*]’ glmmTMB.cpp:625:3: required from ‘Type objective_function::operator()() [with Type = CppAD::AD]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1146:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Array >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:34:67: required from ‘Derived& Eigen::ArrayBase::operator-=(const Scalar&) [with Derived = Eigen::Array; Eigen::ArrayBase::Scalar = int]’ glmmTMB.cpp:903:16: required from ‘Type objective_function::operator()() [with Type = CppAD::AD]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1146:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Map > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Map > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Map > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Map >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Map > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:510:38: required from ‘struct Eigen::internal::cast_return_type >, const Eigen::CwiseUnaryOp, const Eigen::Map > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from ‘struct Eigen::MatrixBase > >::CastXpr’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of ‘template typename Eigen::MatrixBase > >::CastXpr::Type Eigen::MatrixBase > >::cast() const [with NewType = double]’ /usr/lib/R/site-library/TMB/include/convert.hpp:99:35: required from ‘tmbutils::vector asVector(SEXP) [with Type = double; SEXP = SEXPREC*]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1058:38: required from ‘SEXPREC* EvalADFunObjectTemplate(SEXP, SEXP, SEXP) [with ADFunType = CppAD::ADFun; SEXP = SEXPREC*]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1305:64: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from ‘class Eigen::MatrixWrapper >’ /usr/lib/R/site-library/TMB/include/convert.hpp:107:29: required from ‘tmbutils::matrix asMatrix(const tmbutils::vector&, int, int) [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1073:5: required from ‘SEXPREC* EvalADFunObjectTemplate(SEXP, SEXP, SEXP) [with ADFunType = CppAD::ADFun; SEXP = SEXPREC*]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1305:64: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Array, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Array >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:510:38: required from ‘struct Eigen::internal::cast_return_type, const Eigen::CwiseUnaryOp, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:48:179: required from ‘struct Eigen::ArrayBase >::CastXpr’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/../plugins/CommonCwiseUnaryOps.h:62:1: required by substitution of ‘template typename Eigen::ArrayBase >::CastXpr::Type Eigen::ArrayBase >::cast() const [with NewType = int]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:529:64: required from ‘tmbutils::matrix HessianSparsityPattern(CppAD::ADFun*) [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1101:2: required from ‘SEXPREC* EvalADFunObjectTemplate(SEXP, SEXP, SEXP) [with ADFunType = CppAD::ADFun; SEXP = SEXPREC*]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1305:64: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, -1, 1, false, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, -1, 1, false>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, -1>’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:473:48: required from ‘void data_indicator::fill(tmbutils::vector) [with VT = tmbutils::vector; Type = double]’ glmmTMB.cpp:628:3: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, 0, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:22:8: required from ‘struct tmbutils::array’ glmmTMB.cpp:570:17: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from ‘class Eigen::MatrixWrapper >’ /usr/lib/R/site-library/TMB/include/convenience.hpp:49:23: required from ‘tmbutils::vector operator*(Eigen::SparseMatrix, tmbutils::vector) [with Type = double]’ glmmTMB.cpp:638:24: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::MatrixWrapper >, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::MatrixWrapper >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::MatrixWrapper >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, Eigen::MatrixWrapper >, 0, 7>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, Eigen::MatrixWrapper >, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::MatrixWrapper >, 0>’ /usr/lib/R/site-library/TMB/include/convenience.hpp:49:13: required from ‘tmbutils::vector operator*(Eigen::SparseMatrix, tmbutils::vector) [with Type = double]’ glmmTMB.cpp:638:24: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::MatrixWrapper >, 0> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::MatrixWrapper >, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, Eigen::MatrixWrapper >, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper, Eigen::MatrixWrapper >, 0> >’ /usr/lib/R/site-library/TMB/include/convenience.hpp:49:32: required from ‘tmbutils::vector operator*(Eigen::SparseMatrix, tmbutils::vector) [with Type = double]’ glmmTMB.cpp:638:24: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::MatrixWrapper >, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::MatrixWrapper >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::MatrixWrapper >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, Eigen::MatrixWrapper >, 0, 7>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, Eigen::MatrixWrapper >, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::MatrixWrapper >, 0>’ /usr/lib/R/site-library/TMB/include/convenience.hpp:43:12: required from ‘tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]’ glmmTMB.cpp:640:13: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:609:56: required from ‘void report_stack::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector; Type = double]’ glmmTMB.cpp:908:18: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Array >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Array; Eigen::DenseBase::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from ‘Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Array]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1089:14: required from ‘SEXPREC* EvalADFunObjectTemplate(SEXP, SEXP, SEXP) [with ADFunType = CppAD::ADFun; SEXP = SEXPREC*]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1305:64: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from ‘class Eigen::MatrixWrapper >’ /usr/lib/R/site-library/TMB/include/convert.hpp:107:29: required from ‘tmbutils::matrix asMatrix(const tmbutils::vector&, int, int) [with Type = int]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:530:18: required from ‘tmbutils::matrix HessianSparsityPattern(CppAD::ADFun*) [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1101:2: required from ‘SEXPREC* EvalADFunObjectTemplate(SEXP, SEXP, SEXP) [with ADFunType = CppAD::ADFun; SEXP = SEXPREC*]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1305:64: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Array, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::Array, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::Array, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >’ glmmTMB.cpp:385:23: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >’ glmmTMB.cpp:420:36: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >’ glmmTMB.cpp:420:25: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Array, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::Array, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array > > > >’ glmmTMB.cpp:420:19: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::Array >’ glmmTMB.cpp:543:23: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:747:33: required from ‘static Derived& Eigen::internal::setIdentity_impl::run(Derived&) [with Derived = Eigen::Matrix; bool Big = false]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:776:50: required from ‘Derived& Eigen::MatrixBase::setIdentity() [with Derived = Eigen::Matrix]’ /usr/lib/R/site-library/TMB/include/expm.hpp:24:20: required from ‘atomic::Block atomic::Block::addIdentity() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:168:45: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorBlock.h:56:47: required from ‘class Eigen::VectorBlock, -1>’ /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:196:25: required from ‘tmbutils::array tmbutils::array::col(int) [with Type = CppAD::AD]’ glmmTMB.cpp:367:38: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = CppAD::AD]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = CppAD::AD]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = CppAD::AD]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1146:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/TMB/include/TMB.hpp:54, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from ‘class Eigen::SparseCompressedBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from ‘class Eigen::SparseMatrix’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:926:66: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = Eigen::internal::scalar_sum_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/TMB/include/tmbutils/spmat.hpp:22:22: required from ‘Eigen::SparseMatrix tmbutils::asSparseMatrix(SEXP) [with Type = double; SEXP = SEXPREC*]’ glmmTMB.cpp:585:3: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase >, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:269:33: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Transpose >, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Transpose >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Transpose >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Transpose >, 0, 8>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, Eigen::Transpose >, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Transpose >, 0>’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:269:21: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1084:12: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix, 1, int>; _Scalar = CppAD::AD; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator, int>*, std::vector, int>, std::allocator, int> > > >; SparseMatrixType = Eigen::SparseMatrix, 0, int>; DupFunctor = Eigen::internal::scalar_sum_op, CppAD::AD >]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator, int>*, std::vector, int>, std::allocator, int> > > >; _Scalar = CppAD::AD; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/TMB/include/tmbutils/spmat.hpp:22:22: required from ‘Eigen::SparseMatrix tmbutils::asSparseMatrix(SEXP) [with Type = CppAD::AD; SEXP = SEXPREC*]’ glmmTMB.cpp:585:3: required from ‘Type objective_function::operator()() [with Type = CppAD::AD]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1146:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Array; Eigen::Index = long int]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_product_op; Derived = Eigen::internal::redux_evaluator >; Eigen::internal::redux_impl::Scalar = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_product_op; Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:487:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::prod() const [with Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = int]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:631:39: required from ‘SEXPREC* report_stack::reportnames() [with Type = CppAD::AD; SEXP = SEXPREC*]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1148:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:829:17: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Array; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Array; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Array; Derived = Eigen::Block, 1, -1, false>]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1093:18: required from ‘SEXPREC* EvalADFunObjectTemplate(SEXP, SEXP, SEXP) [with ADFunType = CppAD::ADFun; SEXP = SEXPREC*]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1305:64: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from ‘struct Eigen::internal::evaluator > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from ‘struct Eigen::internal::evaluator >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1067:93: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = Eigen::internal::scalar_sum_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/TMB/include/tmbutils/spmat.hpp:22:22: required from ‘Eigen::SparseMatrix tmbutils::asSparseMatrix(SEXP) [with Type = double; SEXP = SEXPREC*]’ glmmTMB.cpp:585:3: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1>, Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1>, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1>, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl, 1>, Eigen::Matrix, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve, 1>, Eigen::Matrix >’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:139:21: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:140:34: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Array >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Array > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Array, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::Array >’ /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:292:3: required from ‘tmbutils::array tmbutils::array::operator/(T) [with T = tmbutils::vector; Type = double]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:1019:23: required from ‘density::VECSCALE_t::scalartype density::VECSCALE_t::operator()(density::VECSCALE_t::arraytype) [with distribution = density::UNSTRUCTURED_CORR_t; density::VECSCALE_t::scalartype = double; density::VECSCALE_t::arraytype = tmbutils::array]’ glmmTMB.cpp:383:22: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Map, 0, Eigen::Stride<0, 0> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >’ /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:292:3: required from ‘tmbutils::array tmbutils::array::operator/(T) [with T = double; Type = double]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:959:23: required from ‘density::SCALE_t::scalartype density::SCALE_t::operator()(density::SCALE_t::arraytype) [with distribution = density::MVNORM_t; density::SCALE_t::scalartype = double; density::SCALE_t::arraytype = tmbutils::array]’ glmmTMB.cpp:541:22: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Array; Eigen::Index = long int]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_max_op; Derived = Eigen::internal::redux_evaluator >; Eigen::internal::redux_impl::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_max_op; Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:438:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::maxCoeff() const [with Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:32:29: required from ‘Type atomic::Block::norm() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Eigen::DenseBase::Scalar = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from ‘Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:932:15: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator, int>*, std::vector, int>, std::allocator, int> > > >; SparseMatrixType = Eigen::SparseMatrix, 0, int>; DupFunctor = Eigen::internal::scalar_sum_op, CppAD::AD >]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator, int>*, std::vector, int>, std::allocator, int> > > >; _Scalar = CppAD::AD; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/TMB/include/tmbutils/spmat.hpp:22:22: required from ‘Eigen::SparseMatrix tmbutils::asSparseMatrix(SEXP) [with Type = CppAD::AD; SEXP = SEXPREC*]’ glmmTMB.cpp:585:3: required from ‘Type objective_function::operator()() [with Type = CppAD::AD]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1146:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map, 0, Eigen::Stride<0, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:29: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1089:50: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix, 1, int>; _Scalar = CppAD::AD; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator, int>*, std::vector, int>, std::allocator, int> > > >; SparseMatrixType = Eigen::SparseMatrix, 0, int>; DupFunctor = Eigen::internal::scalar_sum_op, CppAD::AD >]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator, int>*, std::vector, int>, std::allocator, int> > > >; _Scalar = CppAD::AD; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/TMB/include/tmbutils/spmat.hpp:22:22: required from ‘Eigen::SparseMatrix tmbutils::asSparseMatrix(SEXP) [with Type = CppAD::AD; SEXP = SEXPREC*]’ glmmTMB.cpp:585:3: required from ‘Type objective_function::operator()() [with Type = CppAD::AD]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1146:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from ‘struct Eigen::internal::unary_evaluator, 1, -1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose, 1, -1, false> >; SrcXprType = Eigen::Array; Functor = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose, 1, -1, false> >; SrcXprType = Eigen::Array; Functor = Eigen::internal::assign_op; Weak = void]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Array; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Array; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Array; Derived = Eigen::Block, 1, -1, false>]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1093:18: required from ‘SEXPREC* EvalADFunObjectTemplate(SEXP, SEXP, SEXP) [with ADFunType = CppAD::ADFun; SEXP = SEXPREC*]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1305:64: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 1, -1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, false>, 1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix, 1>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Matrix, 1, 8>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, Eigen::Matrix, 1, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Matrix, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::Matrix, 0>; OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Matrix, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:413:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from ‘struct Eigen::internal::evaluator > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from ‘struct Eigen::internal::evaluator >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:79:45: required from ‘void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix; Functor = Eigen::internal::assign_op; typename SrcXprType::Scalar = double; typename DstXprType::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:38:16: required from ‘Derived& Eigen::SparseMatrixBase::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; Derived = Eigen::SparseMatrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1125:27: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = Eigen::internal::scalar_sum_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; _Scalar = double; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/TMB/include/tmbutils/spmat.hpp:22:22: required from ‘Eigen::SparseMatrix tmbutils::asSparseMatrix(SEXP) [with Type = double; SEXP = SEXPREC*]’ glmmTMB.cpp:585:3: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Diagonal.h:63:53: required from ‘class Eigen::Diagonal, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:319:19: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0>, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 0>, -1, 1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 0>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 0>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 0>, -1, 1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:319:43: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:352:80: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, 7>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0>, -1, 1, false> >, Eigen::Transpose, 1, -1, false> >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:352:67: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:121:7: required from ‘class Eigen::internal::dense_product_base, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, 6>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:353:35: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:174:81: required from ‘class Eigen::DenseBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:121:7: required from ‘class Eigen::internal::dense_product_base, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, 6>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, 1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:353:35: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, Eigen::Block, -1, 1, false>, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, 7>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, -1, -1, false>, Eigen::Block, -1, 1, false>, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:355:32: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, -1, 1, false> >, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:373:56: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, false> >, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from ‘class Eigen::ArrayWrapper, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:381:32: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::Array; Functor = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::Array; Functor = Eigen::internal::assign_op; Weak = void]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Array; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Array; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:41:28: required from ‘Derived& Eigen::DenseBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Array; Derived = Eigen::Block, -1, 1, false>]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:611:32: required from ‘void report_stack::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector; Type = double]’ glmmTMB.cpp:908:18: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Eigen::DenseBase::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from ‘Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:436:18: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::Matrix, 0>; OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Matrix, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:413:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:496, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:110:68: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor, Eigen::Matrix, Eigen::Matrix, Eigen::Matrix, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Eigen::internal::generic_product_impl::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; int Options = 0; Scalar = double; Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product, Eigen::Matrix, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::Matrix, 0>; OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Matrix, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:413:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:391:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 391 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:392:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 392 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:393:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 393 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Inverse.h:69:7: required from ‘class Eigen::InverseImpl >, Eigen::SolverStorage>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Inverse.h:43:7: required from ‘class Eigen::Inverse > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/InverseImpl.h:28:43: required from ‘static void Eigen::internal::compute_inverse::run(const MatrixType&, ResultType&) [with MatrixType = Eigen::Matrix; ResultType = Eigen::Matrix; int Size = -1]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/InverseImpl.h:310:60: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; Eigen::Index = long int]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Array, const Eigen::Array > >; Eigen::internal::redux_impl::Scalar = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; typename Eigen::internal::traits::Scalar = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; typename Eigen::internal::traits::Scalar = int]’ /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:238:26: required from ‘int tmbutils::array::index(tmbutils::vector) [with Type = CppAD::AD]’ /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:211:38: required from ‘Type& tmbutils::array::operator()(int, int) [with Type = CppAD::AD]’ glmmTMB.cpp:447:21: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = CppAD::AD]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = CppAD::AD]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = CppAD::AD]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1146:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, -1, 1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, false>, 1, -1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 1, -1, false>, 1, -1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:221:22: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, 1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:961:41: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, true>, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, -1, 1, false>; Eigen::DenseBase::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:379:13: required from ‘static bool Eigen::internal::ldlt_inplace<1>::unblocked(MatrixType&, TranspositionType&, Workspace&, Eigen::internal::SignMatrix&) [with MatrixType = Eigen::Matrix; TranspositionType = Eigen::Transpositions<-1, -1, int>; Workspace = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:520:51: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from ‘struct Eigen::internal::evaluator_wrapper_base, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from ‘struct Eigen::internal::unary_evaluator, -1, 1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, Eigen::Array > >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/BlasUtil.h:464:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Transpose >, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:269:16: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0>, -1, 1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, 0>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 0>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: required from ‘class Eigen::internal::visitor_evaluator, const Eigen::Block, 0>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:110:17: required from ‘void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::max_coeff_visitor, const Eigen::Block, 0>, -1, 1, false> > >; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0>, -1, 1, false> >]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:266:14: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:131:44: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; Eigen::Index = long int]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Array, const Eigen::Array > >; Eigen::internal::redux_impl::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::Array >; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:146:37: required from ‘density::MVNORM_t::scalartype density::MVNORM_t::Quadform(density::MVNORM_t::vectortype) [with scalartype_ = double; density::MVNORM_t::scalartype = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:150:53: required from ‘density::MVNORM_t::scalartype density::MVNORM_t::operator()(density::MVNORM_t::vectortype) [with scalartype_ = double; density::MVNORM_t::scalartype = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:1019:21: required from ‘density::VECSCALE_t::scalartype density::VECSCALE_t::operator()(density::VECSCALE_t::arraytype) [with distribution = density::UNSTRUCTURED_CORR_t; density::VECSCALE_t::scalartype = double; density::VECSCALE_t::arraytype = tmbutils::array]’ glmmTMB.cpp:383:22: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false> >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:357:27: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 0, Eigen::Stride<0, 0> > >; Eigen::internal::redux_impl::Scalar = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:35: required from ‘Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix, 1, int>; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:163:21: required from ‘Eigen::SparseCompressedBase::InnerIterator::InnerIterator(const Eigen::SparseCompressedBase&, Eigen::Index) [with Derived = Eigen::SparseMatrix, 1, int>; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1089:50: required from ‘Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix, 1, int>; _Scalar = CppAD::AD; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator, int>*, std::vector, int>, std::allocator, int> > > >; SparseMatrixType = Eigen::SparseMatrix, 0, int>; DupFunctor = Eigen::internal::scalar_sum_op, CppAD::AD >]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from ‘void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator, int>*, std::vector, int>, std::allocator, int> > > >; _Scalar = CppAD::AD; int _Options = 0; _StorageIndex = int]’ /usr/lib/R/site-library/TMB/include/tmbutils/spmat.hpp:22:22: required from ‘Eigen::SparseMatrix tmbutils::asSparseMatrix(SEXP) [with Type = CppAD::AD; SEXP = SEXPREC*]’ glmmTMB.cpp:585:3: required from ‘Type objective_function::operator()() [with Type = CppAD::AD]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1146:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, 1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, 1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:369:102: required from ‘struct Eigen::internal::plain_object_eval, -1, -1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = Eigen::internal::sub_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:355:25: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:369:102: required from ‘struct Eigen::internal::plain_object_eval, -1, 1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:370:45: required from ‘struct Eigen::internal::generic_product_impl, -1, -1, false>, Eigen::Block, -1, 1, false>, Eigen::DenseShape, Eigen::DenseShape, 7>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>; Rhs = Eigen::Block, -1, 1, false>; int Options = 0; Scalar = double; Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; Func = Eigen::internal::sub_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, Eigen::Block, -1, 1, false>, 0>; ExpressionType = Eigen::Block, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:355:25: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0, 7>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, -1, -1, false>, Eigen::Transpose, 1, -1, false> >, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:45: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, 1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, 1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, -1, false>, -1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, -1, -1, false>, 1, -1, false> >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, -1, -1, false>, 1, -1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:58: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0, 7>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:45: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:496, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = false]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:104:15: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product::ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product::ResScalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:125:16: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor, Eigen::Matrix, Eigen::Matrix, Eigen::Matrix, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Eigen::internal::generic_product_impl::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::Matrix, 0>; OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Matrix, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:413:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1981:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1981 | PacketBlock kernel; | ^~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gebp_kernel::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, Eigen::internal::gebp_kernel::ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; Eigen::internal::gebp_kernel::ResScalar = double]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:133:13: required from ‘static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product::ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product::ResScalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from ‘void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:125:16: required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor, Eigen::Matrix, Eigen::Matrix, Eigen::Matrix, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; Eigen::internal::generic_product_impl::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::Matrix, 0>; OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Matrix, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:413:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1537:103: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1537 | const int SResPacketHalfSize = unpacket_traits::half>::size; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1592:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1592 | typedef typename conditional=8,typename unpacket_traits::half,SResPacket>::type SResPacketHalf; | ^~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1593:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1593 | typedef typename conditional=8,typename unpacket_traits::half,SLhsPacket>::type SLhsPacketHalf; | ^~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1594:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1594 | typedef typename conditional=8,typename unpacket_traits::half,SRhsPacket>::type SRhsPacketHalf; | ^~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1595:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] 1595 | typedef typename conditional=8,typename unpacket_traits::half,SAccPacket>::type SAccPacketHalf; | ^~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, -1, 1, true>, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, -1, 1, true>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, -1, 1, true, true>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Derived = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from ‘tmbutils::vector::vector(T1) [with T1 = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:31:20: required from ‘Type atomic::Block::norm() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false>, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 1, -1, false, true>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Derived = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from ‘tmbutils::vector::vector(T1) [with T1 = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:31:20: required from ‘Type atomic::Block::norm() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array; SrcXprType = Eigen::Block, -1, 1, false>; Functor = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array; SrcXprType = Eigen::Block, -1, 1, false>; Functor = Eigen::internal::assign_op; Weak = void]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array; Src = Eigen::Block, -1, 1, false>; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Array; Src = Eigen::Block, -1, 1, false>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Array; Src = Eigen::Block, -1, 1, false>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:33:26: required from ‘tmbutils::vector& tmbutils::vector::operator=(const T1&) [with T1 = Eigen::VectorBlock, -1>; Type = int]’ /usr/lib/R/site-library/TMB/include/tmbutils/array.hpp:196:13: required from ‘tmbutils::array tmbutils::array::col(int) [with Type = CppAD::AD]’ glmmTMB.cpp:367:38: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = CppAD::AD]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = CppAD::AD]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = CppAD::AD]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1146:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128i’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Transpose >, 1>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Transpose >, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Transpose >, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Transpose >, 1, 8>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, Eigen::Transpose >, 1, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Transpose >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Transpose >, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:269:16: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 1, -1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:321:36: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, -1, -1, false>, 1, -1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, -1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, -1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, -1, -1, false>, 1, -1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::Block, -1, -1, false>, 1, -1, false>; typename Eigen::NumTraits::Scalar>::Real = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:321:36: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:499, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘struct Eigen::internal::general_matrix_vector_product, 0, false, double, Eigen::internal::const_blas_data_mapper, false, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Dest = Eigen::Array; typename Dest::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Eigen::internal::generic_product_impl::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>; Eigen::internal::generic_product_impl_base::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; int Options = 0; Scalar = double; Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product, Eigen::MatrixWrapper >, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from ‘tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/convenience.hpp:43:23: required from ‘tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]’ glmmTMB.cpp:640:13: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:75:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 75 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:76:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 76 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:77:71: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 77 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 2, Eigen::Stride<0, 0> >, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 2, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 2, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 2, Eigen::Stride<0, 0> >, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from ‘tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/convenience.hpp:43:23: required from ‘tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]’ glmmTMB.cpp:640:13: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, const Eigen::Matrix >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from ‘tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/convenience.hpp:43:23: required from ‘tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]’ glmmTMB.cpp:640:13: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Map, 2, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:287:40: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Dest = Eigen::Array; typename Dest::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from ‘tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/convenience.hpp:43:23: required from ‘tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]’ glmmTMB.cpp:640:13: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Matrix >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:523:30: required from ‘void Eigen::PartialPivLU::compute() [with _MatrixType = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:131:14: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, Eigen::internal::member_sum, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, Eigen::internal::member_sum, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, Eigen::internal::member_sum, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from ‘class Eigen::PartialReduxExpr, const Eigen::Matrix >, Eigen::internal::member_sum, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:523:46: required from ‘void Eigen::PartialPivLU::compute() [with _MatrixType = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:131:14: required from ‘Eigen::PartialPivLU& Eigen::PartialPivLU::compute(const Eigen::EigenBase&) [with InputType = Eigen::Matrix; _MatrixType = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:323:10: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; Eigen::Index = long int]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Block, -1, 1, true>, -1, 1, false> > >; Eigen::internal::redux_impl::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, 1, true>, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:221:28: required from ‘static typename Eigen::NumTraits::Scalar>::Real Eigen::internal::lpNorm_selector::run(const Eigen::MatrixBase&) [with Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:269:52: required from ‘typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::lpNorm() const [with int p = 1; Derived = Eigen::Block, -1, 1, true>, -1, 1, false>; typename Eigen::NumTraits::Scalar>::Real = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:508:74: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:251:54: required from ‘static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Block, 1, -1, false>; Rhs = Eigen::Block, -1, 1, false>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:138:63: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix, 2>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix, 2> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix, 2> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, Eigen::Matrix, 2, 8>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, Eigen::Matrix, 2, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::Matrix, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:565:26: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:139:9: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase > >, Eigen::Matrix, 2>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase > >, Eigen::Matrix, 2> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase > >, Eigen::Matrix, 2> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base > >, Eigen::Matrix, 2, 8>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl > >, Eigen::Matrix, 2, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product > >, Eigen::Matrix, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:595:38: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:139:9: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:499, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h: In instantiation of ‘static void Eigen::internal::general_matrix_vector_product::run(Index, Index, const LhsMapper&, const RhsMapper&, Eigen::internal::general_matrix_vector_product::ResScalar*, Index, RhsScalar) [with Index = long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateRhs = false; int Version = 0; Eigen::internal::general_matrix_vector_product::ResScalar = double]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Dest = Eigen::Array; typename Dest::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Eigen::internal::generic_product_impl::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>; Eigen::internal::generic_product_impl_base::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: required from ‘static void Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; int Options = 0; Scalar = double; Eigen::internal::Assignment, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product, Eigen::MatrixWrapper >, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from ‘tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/convenience.hpp:43:23: required from ‘tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]’ glmmTMB.cpp:640:13: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 112 | conj_helper pcj; | ^~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:112:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:139:9: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:67: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, 1, -1, false>; Eigen::DenseBase::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:586:18: required from ‘void Eigen::LDLT::_solve_impl(const RhsType&, DstType&) const [with RhsType = Eigen::Matrix; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:139:9: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, -1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, -1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Block, -1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, -1, -1, false>, 1, -1, false> >; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:369:102: required from ‘struct Eigen::internal::plain_object_eval, -1, -1, false>, -1, -1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:369:45: required from ‘struct Eigen::internal::generic_product_impl, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, Eigen::DenseShape, Eigen::DenseShape, 7>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, 1, false>; Lhs = Eigen::Block, -1, -1, false>, -1, -1, false>; Rhs = Eigen::Transpose, -1, -1, false>, 1, -1, false> >; int Options = 0; Scalar = double; Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>, -1, 1, false>; Src = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>; Func = Eigen::internal::sub_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, -1, -1, false>, -1, -1, false>, Eigen::Transpose, -1, -1, false>, 1, -1, false> >, 0>; ExpressionType = Eigen::Block, -1, -1, false>, -1, 1, false>; StorageBase = Eigen::MatrixBase]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:325:38: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from ‘class Eigen::Matrix’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:155:52: required from ‘void Eigen::internal::tribb_kernel::operator()(Eigen::internal::tribb_kernel::ResScalar*, Index, Index, const LhsScalar*, const RhsScalar*, Index, Index, const ResScalar&) [with LhsScalar = double; RhsScalar = double; Index = long int; int mr = 4; int nr = 4; bool ConjLhs = false; bool ConjRhs = false; int ResInnerStride = 1; int UpLo = 1; Eigen::internal::tribb_kernel::ResScalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:116:13: required from ‘static void Eigen::internal::general_matrix_matrix_triangular_product::run(Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_triangular_product::ResScalar*, Index, Index, const ResScalar&, Eigen::internal::level3_blocking&) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 1; bool ConjugateRhs = false; int ResInnerStride = 1; int UpLo = 1; int Version = 0; Eigen::internal::general_matrix_matrix_triangular_product::ResScalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/SelfadjointProduct.h:113:12: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:371, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In instantiation of ‘Index Eigen::internal::first_default_aligned(const Scalar*, Index) [with Scalar = double; Index = long int]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixVector.h:128:55: required from ‘static void Eigen::internal::general_matrix_vector_product::run(Index, Index, const LhsMapper&, const RhsMapper&, Eigen::internal::general_matrix_vector_product::ResScalar*, Index, RhsScalar) [with Index = long int; LhsScalar = double; LhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateLhs = false; RhsScalar = double; RhsMapper = Eigen::internal::const_blas_data_mapper; bool ConjugateRhs = false; int Version = 0; Eigen::internal::general_matrix_vector_product::ResScalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/GeneralProduct.h:244:134: required from ‘static void Eigen::internal::gemv_dense_selector<2, 0, true>::run(const Lhs&, const Rhs&, Dest&, const typename Dest::Scalar&) [with Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Dest = Eigen::Array; typename Dest::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:383:34: required from ‘static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Eigen::internal::generic_product_impl::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:361:27: required from ‘static void Eigen::internal::generic_product_impl_base::scaleAndAddTo(Dst&, const Lhs&, const Rhs&, const Scalar&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>; Eigen::internal::generic_product_impl_base::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:349:33: required from ‘static void Eigen::internal::generic_product_impl_base::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Array; Lhs = Eigen::Matrix; Rhs = Eigen::MatrixWrapper >; Derived = Eigen::internal::generic_product_impl, Eigen::MatrixWrapper >, Eigen::DenseShape, Eigen::DenseShape, 7>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; OtherDerived = Eigen::Product, Eigen::MatrixWrapper >, 0>; Derived = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::Product, Eigen::MatrixWrapper >, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from ‘tmbutils::vector::vector(T1) [with T1 = Eigen::Product, Eigen::MatrixWrapper >, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/convenience.hpp:43:23: required from ‘tmbutils::vector operator*(tmbutils::matrix, tmbutils::vector) [with Type = double]’ glmmTMB.cpp:640:13: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:470:60: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 470 | return first_aligned::alignment>(array, size); | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 1, -1, false> >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, 1, -1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::Matrix, 0>; OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Matrix, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:413:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from ‘const CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix; Rhs = Eigen::Matrix; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::internal::traits::Lhs>::Scalar = double; Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Product, Eigen::Matrix, 0>; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Product, Eigen::Matrix, 0>; OtherDerived = Eigen::Product, Eigen::Matrix, 0>; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Product, Eigen::Matrix, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Matrix, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:413:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, 1, true> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from ‘class Eigen::internal::redux_evaluator, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from ‘ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, -1, 1, true>; ResultType = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:23: required from ‘const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_sum; int Direction = 1; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:61: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Derived = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from ‘tmbutils::vector::vector(T1) [with T1 = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:31:20: required from ‘Type atomic::Block::norm() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from ‘class Eigen::internal::redux_evaluator, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from ‘ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, 1, -1, false>; ResultType = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1318:23: required from ‘const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_sum; int Direction = 1; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:61: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Derived = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from ‘tmbutils::vector::vector(T1) [with T1 = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:31:20: required from ‘Type atomic::Block::norm() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 0, 8>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:492:30: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, Eigen::CwiseNullaryOp, Eigen::Matrix > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, Eigen::CwiseNullaryOp, Eigen::Matrix > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, Eigen::CwiseNullaryOp, Eigen::Matrix > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:86:7: required from ‘class Eigen::SolveImpl >, Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:62:7: required from ‘class Eigen::Solve >, Eigen::CwiseNullaryOp, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:577:39: required from ‘static void Eigen::internal::Assignment >, Eigen::internal::assign_op::Scalar>, Eigen::internal::Dense2Dense>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op::Scalar>&) [with DstXprType = Eigen::Matrix; MatrixType = Eigen::Matrix; Eigen::internal::Assignment >, Eigen::internal::assign_op::Scalar>, Eigen::internal::Dense2Dense>::SrcXprType = Eigen::Inverse > >; typename Eigen::PartialPivLU::Scalar = double; typename DstXprType::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:381:43: required from ‘static Eigen::Index Eigen::internal::partial_lu_impl::unblocked_lu(Eigen::internal::partial_lu_impl::MatrixType&, PivIndex*, PivIndex&) [with Scalar = double; int StorageOrder = 0; PivIndex = int; Eigen::Index = long int; Eigen::internal::partial_lu_impl::MatrixType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:436:26: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0, 5>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:406:78: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, -1, -1, false>, -1, 1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = Eigen::internal::div_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>, -1, 1, false>; SrcXprType = Eigen::CwiseNullaryOp, Eigen::Matrix >; Functor = Eigen::internal::div_assign_op; Weak = void]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>, -1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = Eigen::internal::div_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>, -1, 1, false>; Src = Eigen::CwiseNullaryOp, Eigen::Matrix >; Func = Eigen::internal::div_assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SelfCwiseBinaryOp.h:41:28: required from ‘Derived& Eigen::DenseBase::operator/=(const Scalar&) [with Derived = Eigen::Block, -1, -1, false>, -1, 1, false>; Eigen::DenseBase::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LLT.h:326:21: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp, Eigen::Matrix >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from ‘Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Eigen::DenseBase::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from ‘Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h:171:23: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘void density::MVNORM_t::simulate(density::MVNORM_t::vectortype&) [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:184:3: required from ‘density::MVNORM_t::vectortype density::MVNORM_t::simulate() [with scalartype_ = double; density::MVNORM_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:385:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Block, -1, 1, true>; Eigen::Index = long int]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, -1, 1, true> >; Eigen::internal::redux_impl::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from ‘ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, -1, 1, true>; ResultType = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:23: required from ‘const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_sum; int Direction = 1; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:61: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Derived = Eigen::Array]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:171:31: required from ‘Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const T&) [with T = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:24:22: required from ‘tmbutils::vector::vector(T1) [with T1 = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 1>; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:31:20: required from ‘Type atomic::Block::norm() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:160:37: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, -1, 1, true>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::Matrix >, -1, 1, true, false>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, const Eigen::Matrix >, -1, 1, true, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, const Eigen::Matrix >, -1, 1, true>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1307:33: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix >, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix >, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, const Eigen::Matrix >, 1, -1, false, false>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, const Eigen::Matrix >, 1, -1, false, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, const Eigen::Matrix >, 1, -1, false>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1309:33: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:961:41: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from ‘Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:961:41: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: required from ‘class Eigen::internal::visitor_evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:110:17: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: required from ‘struct Eigen::internal::unary_evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:71:51: required from ‘class Eigen::internal::visitor_evaluator, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:110:17: required from ‘void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::max_coeff_visitor, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >; Derived = Eigen::CwiseUnaryOp, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Visitor.h:266:14: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:496, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = true]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:153:19: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 5; bool Conjugate = false; int TriStorageOrder = 0; int OtherInnerStride = 1]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Matrix; Rhs = Eigen::Matrix; int Side = 1; int Mode = 5]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:509:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Matrix; unsigned int _Mode = 5]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:568:25: required from ‘void Eigen::LDLT::_solve_impl(const RhsType&, DstType&) const [with RhsType = Eigen::Matrix; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:139:9: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1981:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1981 | PacketBlock kernel; | ^~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_lhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int Pack1 = 4; int Pack2 = 2; bool Conjugate = false; bool PanelMode = false]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/TriangularSolverMatrix.h:160:21: required from ‘static void Eigen::internal::triangular_solve_matrix::run(Index, Index, const Scalar*, Index, Scalar*, Index, Index, Eigen::internal::level3_blocking&) [with Scalar = double; Index = long int; int Mode = 6; bool Conjugate = false; int TriStorageOrder = 1; int OtherInnerStride = 1]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:102:12: required from ‘static void Eigen::internal::triangular_solver_selector::run(const Lhs&, Rhs&) [with Lhs = const Eigen::Transpose >; Rhs = Eigen::Matrix; int Side = 1; int Mode = 6]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/SolveTriangular.h:182:21: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with int Side = 1; OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Transpose >; unsigned int _Mode = 6]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/TriangularMatrix.h:509:37: required from ‘void Eigen::TriangularViewImpl<_MatrixType, _Mode, Eigen::Dense>::solveInPlace(const Eigen::MatrixBase&) const [with OtherDerived = Eigen::Matrix; _MatrixType = const Eigen::Transpose >; unsigned int _Mode = 6]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Cholesky/LDLT.h:592:25: required from ‘void Eigen::LDLT::_solve_impl(const RhsType&, DstType&) const [with RhsType = Eigen::Matrix; DstType = Eigen::Matrix; _MatrixType = Eigen::Matrix; int _UpLo = 1]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Solve.h:147:26: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:139:9: required from ‘void density::MVNORM_t::setSigma(density::MVNORM_t::matrixtype, bool) [with scalartype_ = double; density::MVNORM_t::matrixtype = tmbutils::matrix]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:276:19: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 1847 | PacketBlock kernel; | ^~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase >, -1, 1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase >, -1, 1, false>, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase >, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase >, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase >, -1, 1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense >, -1, 1, false, true>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Transpose >, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:269:16: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from ‘const CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Matrix; Rhs = Eigen::Transpose >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::internal::traits::Lhs>::Scalar = double; Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Transpose >, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:269:16: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:961:41: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Functor = Eigen::internal::swap_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Src = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Func = Eigen::internal::swap_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Src = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Func = Eigen::internal::swap_assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:418:22: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Functor = Eigen::internal::swap_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Src = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Func = Eigen::internal::swap_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Src = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Func = Eigen::internal::swap_assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:418:22: required from ‘void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>; Derived = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:480:24: [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, 8>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, -1, 1, true> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Matrix >, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from ‘ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; ResultType = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1307:23: required from ‘const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index, Eigen::Index) const [with ArgType = const Eigen::CwiseUnaryOp, const Eigen::Matrix >; MemberOp = Eigen::internal::member_sum; int Direction = 0; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:381:29: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, const Eigen::Matrix >, 1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Matrix >, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, const Eigen::Matrix >, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, const Eigen::Matrix >, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from ‘ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, const Eigen::Matrix >, 1, -1, false>; ResultType = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1309:23: required from ‘const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index, Eigen::Index) const [with ArgType = const Eigen::CwiseUnaryOp, const Eigen::Matrix >; MemberOp = Eigen::internal::member_sum; int Direction = 0; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:381:29: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>; Functor = Eigen::internal::swap_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>; SrcXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>; Functor = Eigen::internal::swap_assign_op; Weak = void]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>; Src = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>; Func = Eigen::internal::swap_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>; Src = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>; Func = Eigen::internal::swap_assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:418:22: required from ‘void Eigen::DenseBase::swap(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>; Derived = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:390:25: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:274:18: required from ‘void Eigen::internal::outer_product_selector_run(Dst&, const Lhs&, const Rhs&, const Func&, const Eigen::internal::false_type&) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>; Lhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>; Func = Eigen::internal::generic_product_impl, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, Eigen::DenseShape, Eigen::DenseShape, 5>::sub]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:329:41: required from ‘static void Eigen::internal::generic_product_impl::subTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>; Lhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:178:42: required from ‘static void Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::sub_assign_op&) [with DstXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>; Lhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>; int Options = 0; Scalar = double; Eigen::internal::Assignment, Eigen::internal::sub_assign_op, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>; Func = Eigen::internal::sub_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/NoAlias.h:58:31: required from ‘ExpressionType& Eigen::NoAlias::operator-=(const StorageBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, 0>; ExpressionType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>; StorageBase = Eigen::MatrixBase]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:406:53: [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 3>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:280:48: required from ‘void Eigen::internal::outer_product_selector_run(Dst&, const Lhs&, const Rhs&, const Func&, const Eigen::internal::false_type&) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>; Lhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>; Rhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>; Func = Eigen::internal::generic_product_impl, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false>, Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, 1, -1, false>, 1, -1, false>, Eigen::DenseShape, Eigen::DenseShape, 5>::sub]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:329:41: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator >, -1, 1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator >, -1, 1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 1, -1, false> >, const Eigen::Block >, -1, 1, false> >; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Product, Eigen::Transpose >, 0>; Type = double]’ /usr/lib/R/site-library/TMB/include/tmbutils/density.hpp:269:16: required from ‘density::UNSTRUCTURED_CORR_t::UNSTRUCTURED_CORR_t(density::UNSTRUCTURED_CORR_t::vectortype) [with scalartype_ = double; density::UNSTRUCTURED_CORR_t::vectortype = tmbutils::vector]’ glmmTMB.cpp:380:40: required from ‘Type termwise_nll(tmbutils::array&, tmbutils::vector, per_term_info&, bool) [with Type = double]’ glmmTMB.cpp:572:24: required from ‘Type allterms_nll(tmbutils::vector&, tmbutils::vector, tmbutils::vector >&, bool) [with Type = double]’ glmmTMB.cpp:634:23: required from ‘Type objective_function::operator()() [with Type = double]’ /usr/lib/R/site-library/TMB/include/tmb_core.hpp:1377:7: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2, 8>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, Eigen::CwiseNullaryOp, Eigen::Matrix >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/LU/PartialPivLU.h:237:28: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; Eigen::Index = long int]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from ‘static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Matrix >, -1, 1, true> >; Eigen::internal::redux_impl::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from ‘ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, const Eigen::Matrix >, -1, 1, true>; ResultType = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1307:23: required from ‘const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index, Eigen::Index) const [with ArgType = const Eigen::CwiseUnaryOp, const Eigen::Matrix >; MemberOp = Eigen::internal::member_sum; int Direction = 0; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:381:29: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >; Functor = Eigen::internal::sub_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >; Functor = Eigen::internal::sub_assign_op; Weak = void]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >; Func = Eigen::internal::sub_assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >; Func = Eigen::internal::sub_assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:164:18: required from ‘Derived& Eigen::MatrixBase::operator-=(const Eigen::MatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, 1, true>, -1, 1, false> >; Derived = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:305:135: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false, true>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 24 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 22 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true, true>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 24 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from ‘const CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>; Rhs = Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::internal::traits::Lhs>::Scalar = double; Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from ‘struct Eigen::internal::unary_evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 26 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, -1, false>, -1, -1, false>, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 23 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, Eigen::Matrix >, 1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, Eigen::Matrix >, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, Eigen::Matrix >, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from ‘class Eigen::internal::BlockImpl_dense, Eigen::Matrix >, 1, -1, false, false>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl, Eigen::Matrix >, 1, -1, false, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block, Eigen::Matrix >, 1, -1, false>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:1009:11: [ skipping 25 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, Eigen::Matrix >, 1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, false>; SrcXprType = Eigen::Block, Eigen::Matrix >, 1, -1, false>; Functor = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from ‘static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, 1, -1, false>; SrcXprType = Eigen::Block, Eigen::Matrix >, 1, -1, false>; Functor = Eigen::internal::assign_op; Weak = void]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Block, Eigen::Matrix >, 1, -1, false>; Func = Eigen::internal::assign_op]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Block, Eigen::Matrix >, 1, -1, false>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, 1, -1, false>; Src = Eigen::Block, Eigen::Matrix >, 1, -1, false>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: [ skipping 26 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:818:25: required from ‘void Eigen::PlainObjectBase::_init1(const Eigen::DenseBase&) [with T = Eigen::Inverse >; OtherDerived = Eigen::Inverse >; Derived = Eigen::Matrix]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:294:31: required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const T&) [with T = Eigen::Inverse >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’ /usr/lib/R/site-library/TMB/include/tmbutils/vector.hpp:93:22: required from ‘tmbutils::matrix::matrix(T1) [with T1 = Eigen::Inverse >; Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:36:14: required from ‘atomic::Block atomic::Block::inverse() [with Type = double]’ /usr/lib/R/site-library/TMB/include/expm.hpp:180:33: required from ‘matrix_pade atomic::expm(matrix_pade) [with matrix_pade = atomic::nestedTriangle<0>]’ /usr/lib/R/site-library/TMB/include/expm.hpp:192:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from ‘class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from ‘class Eigen::CwiseUnaryOp, const Eigen::Matrix >’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:519:1: required from ‘bool atomic::atomicinvpd::reverse(size_t, const CppAD::vector&, const CppAD::vector&, CppAD::vector&, const CppAD::vector&) [with Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:519:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:519:1: required from ‘bool atomic::atomicinvpd::reverse(size_t, const CppAD::vector&, const CppAD::vector&, CppAD::vector&, const CppAD::vector&) [with Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:519:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> > >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::Stride<0, 0> > >’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘bool atomic::atomicmatmul::reverse(size_t, const CppAD::vector&, const CppAD::vector&, CppAD::vector&, const CppAD::vector&) [with Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, 8>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘void atomic::matmul(const CppAD::vector&, CppAD::vector&) [with Double = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘bool atomic::atomicmatmul::forward(size_t, size_t, const CppAD::vector&, CppAD::vector&, const CppAD::vector&, CppAD::vector&) [with Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 1>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 1> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from ‘class Eigen::internal::dense_product_base, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 1, 8>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from ‘class Eigen::ProductImpl, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 1, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from ‘class Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 1>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:796:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if::value, void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if::value, void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘void atomic::matmul(const CppAD::vector&, CppAD::vector&) [with Double = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘bool atomic::atomicmatmul::forward(size_t, size_t, const CppAD::vector&, CppAD::vector&, const CppAD::vector&, CppAD::vector&) [with Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1, -1, false>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, 1, -1, false, true>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:796:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if::value, void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if::value, void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘void atomic::matmul(const CppAD::vector&, CppAD::vector&) [with Double = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘bool atomic::atomicmatmul::forward(size_t, size_t, const CppAD::vector&, CppAD::vector&, const CppAD::vector&, CppAD::vector&) [with Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from ‘class Eigen::TransposeImpl, 0, Eigen::Stride<0, 0> >, 1, -1, false>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from ‘class Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:796:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if::value, void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if::value, void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘void atomic::matmul(const CppAD::vector&, CppAD::vector&) [with Double = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘bool atomic::atomicmatmul::forward(size_t, size_t, const CppAD::vector&, CppAD::vector&, const CppAD::vector&, CppAD::vector&) [with Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from ‘class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 2>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, -1, 1, true>, 0>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense, 0, Eigen::Stride<0, 0> >, -1, 1, true, true>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:796:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if::value, void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if::value, void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘void atomic::matmul(const CppAD::vector&, CppAD::vector&) [with Double = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘bool atomic::atomicmatmul::forward(size_t, size_t, const CppAD::vector&, CppAD::vector&, const CppAD::vector&, CppAD::vector&) [with Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, 0>’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from ‘class Eigen::MatrixBase, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true>, Eigen::Dense>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from ‘const CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; Rhs = Eigen::Map, 0, Eigen::Stride<0, 0> >; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::internal::traits::Lhs>::Scalar = double; Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:796:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if::value, void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if::value, void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘void atomic::matmul(const CppAD::vector&, CppAD::vector&) [with Double = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘bool atomic::atomicmatmul::forward(size_t, size_t, const CppAD::vector&, CppAD::vector&, const CppAD::vector&, CppAD::vector&) [with Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from ‘struct Eigen::internal::unary_evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, Eigen::internal::IndexBased, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, 1, -1, false> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:796:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if::value, void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if::value, void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘void atomic::matmul(const CppAD::vector&, CppAD::vector&) [with Double = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘bool atomic::atomicmatmul::forward(size_t, size_t, const CppAD::vector&, CppAD::vector&, const CppAD::vector&, CppAD::vector&) [with Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from ‘struct Eigen::internal::evaluator, 0, Eigen::Stride<0, 0> >, -1, 1, true> >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from ‘struct Eigen::internal::binary_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from ‘struct Eigen::internal::evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from ‘class Eigen::internal::redux_evaluator, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> > >’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from ‘typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose, 0, Eigen::Stride<0, 0> >, 1, -1, false> >, const Eigen::Block, 0, Eigen::Stride<0, 0> >, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:796:41: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if::value, void*>::type) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if::value, void*>::type = void*]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Map, 0, Eigen::Stride<0, 0> >; Src = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>]’ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from ‘Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Product, 0, Eigen::Stride<0, 0> >, Eigen::Map, 0, Eigen::Stride<0, 0> >, 0>; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘void atomic::matmul(const CppAD::vector&, CppAD::vector&) [with Double = double]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from ‘bool atomic::atomicmatmul::forward(size_t, size_t, const CppAD::vector&, CppAD::vector&, const CppAD::vector&, CppAD::vector&) [with Type = double; size_t = long unsigned int]’ /usr/lib/R/site-library/TMB/include/atomic_math.hpp:426:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits::type’ {aka ‘__m128d’} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:371, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/TMB/include/TMB.hpp:53, from glmmTMB.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function ‘void report_stack::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector >; Type = CppAD::AD]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:31: warning: iteration 1152921504606846976 invokes undefined behavior [-Waggressive-loop-optimizations] 259 | while(size) ptr[--size].~T(); | ~~~~~~~~~~~~~~^~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:11: note: within this loop 259 | while(size) ptr[--size].~T(); | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function ‘void report_stack::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector; Type = double]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:31: warning: iteration 1152921504606846976 invokes undefined behavior [-Waggressive-loop-optimizations] 259 | while(size) ptr[--size].~T(); | ~~~~~~~~~~~~~~^~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:11: note: within this loop 259 | while(size) ptr[--size].~T(); | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function ‘void report_stack::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector > >; Type = CppAD::AD >]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:31: warning: iteration 1152921504606846976 invokes undefined behavior [-Waggressive-loop-optimizations] 259 | while(size) ptr[--size].~T(); | ~~~~~~~~~~~~~~^~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:11: note: within this loop 259 | while(size) ptr[--size].~T(); | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h: In member function ‘void report_stack::push(Vector_Matrix_Or_Array, const char*) [with Vector_Matrix_Or_Array = tmbutils::vector > > >; Type = CppAD::AD > >]’: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:31: warning: iteration 1152921504606846976 invokes undefined behavior [-Waggressive-loop-optimizations] 259 | while(size) ptr[--size].~T(); | ~~~~~~~~~~~~~~^~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:259:11: note: within this loop 259 | while(size) ptr[--size].~T(); | ^~~~ g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-z,relro -o glmmTMB.so glmmTMB.o -llapack -lblas -lgfortran -lm -lquadmath -fopenmp -L/usr/lib/R/lib -lR make[1]: Leaving directory '/build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1/src' make[1]: Entering directory '/build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1/src' make[1]: Leaving directory '/build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1/src' installing to /build/r-cran-glmmtmb-5DX3mR/r-cran-glmmtmb-1.0.2.1/debian/r-cran-glmmtmb/usr/lib/R/site-library/00LOCK-r-cran-glmmtmb-1.0.2.1/00new/glmmTMB/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmmTMB) W: Ignoring specified R dependency: R (>= 3.2.0) I: Using r-cran-testthat for Recommends:testthat I: Using r-cran-pscl for Recommends:pscl I: Using r-cran-knitr for Suggests:knitr I: Using r-cran-rmarkdown for Suggests:rmarkdown I: Using r-cran-mass for Suggests:MASS I: Using r-cran-lattice for Suggests:lattice I: Using r-cran-ggplot2 for Suggests:ggplot2 (>= 2.2.1) I: Using r-cran-mlmrev for Suggests:mlmRev I: Using r-cran-bbmle for Suggests:bbmle (>= 1.0.19) I: Using r-cran-coda for Suggests:coda I: Using r-cran-reshape2 for Suggests:reshape2 I: Using r-cran-car for Suggests:car (>= 3.0.6) I: Using r-cran-emmeans for Suggests:emmeans (>= 1.4) I: Using r-cran-estimability for Suggests:estimability W: Cannot find a debian package for Suggests:DHARMa I: Using r-cran-multcomp for Suggests:multcomp W: Cannot find a debian package for Suggests:MuMIn I: Using r-cran-effects for Suggests:effects (>= 4.0-1) W: Cannot find a debian package for Suggests:dotwhisker I: Using r-cran-broom for Suggests:broom I: Using r-cran-broom.mixed for Suggests:broom.mixed I: Using r-cran-plyr for Suggests:plyr I: Using r-cran-png for Suggests:png I: Using r-cran-boot for Suggests:boot W: Cannot find a debian package for Suggests:texreg I: Using r-cran-xtable for Suggests:xtable W: Cannot find a debian package for Suggests:huxtable I: Using r-cran-numderiv for Suggests:numDeriv I: Using r-cran-tmb for Imports:TMB (>= 1.7.14) I: Using r-cran-lme4 for Imports:lme4 (>= 1.1-18.9000) I: Using r-cran-matrix for Imports:Matrix I: Using r-cran-nlme for Imports:nlme I: Using r-cran-tmb for LinkingTo:TMB I: Using r-cran-rcppeigen for LinkingTo:RcppEigen I: Use r-cran-glmmtmb as Debian binary package for variables substitution dh_installdocs -a -O--buildsystem=R dh_installchangelogs -a -O--buildsystem=R dh_installsystemduser -a -O--buildsystem=R dh_perl -a -O--buildsystem=R dh_link -a -O--buildsystem=R dh_strip_nondeterminism -a -O--buildsystem=R dh_compress -a -O--buildsystem=R dh_fixperms -a -O--buildsystem=R dh_missing -a -O--buildsystem=R dh_dwz -a -a -O--buildsystem=R dh_strip -a -a -O--buildsystem=R dh_makeshlibs -a -a -O--buildsystem=R dh_shlibdeps -a -a -O--buildsystem=R dh_installdeb -a -O--buildsystem=R dh_gencontrol -a -O--buildsystem=R dh_md5sums -a -O--buildsystem=R dh_builddeb -a -O--buildsystem=R dpkg-deb: building package 'r-cran-glmmtmb' in '../r-cran-glmmtmb_1.0.2.1-1+b1_amd64.deb'. dpkg-deb: building package 'r-cran-glmmtmb-dbgsym' in '../r-cran-glmmtmb-dbgsym_1.0.2.1-1+b1_amd64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../r-cran-glmmtmb_1.0.2.1-1+b1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/r-cran-glmmtmb-5DX3mR /tmp/r-cran-glmmtmb-1.0.2.1-1+b11sm18ur7 I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.ht2x_KPLBg... I: success in 720.6168 seconds md5: r-cran-glmmtmb-dbgsym_1.0.2.1-1+b1_amd64.deb: OK md5: r-cran-glmmtmb_1.0.2.1-1+b1_amd64.deb: OK sha1: r-cran-glmmtmb-dbgsym_1.0.2.1-1+b1_amd64.deb: OK sha1: r-cran-glmmtmb_1.0.2.1-1+b1_amd64.deb: OK sha256: r-cran-glmmtmb-dbgsym_1.0.2.1-1+b1_amd64.deb: OK sha256: r-cran-glmmtmb_1.0.2.1-1+b1_amd64.deb: OK Checksums: OK