Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/r/r-bioc-fmcsr/r-bioc-fmcsr_1.38.0+dfsg-1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/r-bioc-fmcsr-1.38.0+dfsg-1vyltcrn7/r-bioc-fmcsr_1.38.0+dfsg-1_amd64.buildinfo Get source package info: r-bioc-fmcsr=1.38.0+dfsg-1 Source URL: http://snapshot.notset.fr/mr/package/r-bioc-fmcsr/1.38.0+dfsg-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6+b1 binutils=2.38-4 binutils-common=2.38-4 binutils-x86-64-linux-gnu=2.38-4 bsdextrautils=2.38-4 bsdutils=1:2.38-4 build-essential=12.9 bzip2=1.0.8-5 ca-certificates=20211016 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.3.0-1 dash=0.5.11+git20210903+057cd650a4ed-8 dctrl-tools=2.24-3+b1 debconf=1.5.79 debhelper=13.7.1 debianutils=5.7-0.2 dh-autoreconf=20 dh-r=20210816 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.7 dpkg-dev=1.21.7 dwz=0.14-1 file=1:5.41-4 findutils=4.9.0-3 fontconfig=2.13.1-4.4 fontconfig-config=2.13.1-4.4 fonts-dejavu-core=2.37-2 fonts-font-awesome=5.0.10+really4.7.0~dfsg-4.1 fonts-glyphicons-halflings=1.009~3.4.1+dfsg-2 g++=4:11.2.0-2 g++-11=11.3.0-1 gcc=4:11.2.0-2 gcc-11=11.3.0-1 gcc-11-base=11.3.0-1 gcc-12-base=12.1.0-1 gettext=0.21-6 gettext-base=0.21-6 gfortran=4:11.2.0-2 gfortran-11=11.3.0-1 grep=3.7-1 groff-base=1.22.4-8 gzip=1.12-1 hostname=3.23 icu-devtools=71.1-3 init-system-helpers=1.62 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libalgorithm-c3-perl=0.11-1 libarchive-zip-perl=1.68-1 libasan6=11.3.0-1 libatomic1=12.1.0-1 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libb-hooks-endofscope-perl=0.26-1 libb-hooks-op-check-perl=0.22-1+b4 libbinutils=2.38-4 libblas-dev=3.10.1-1 libblas3=3.10.1-1 libblkid1=2.38-4 libboost-dev=1.74.0.3 libboost1.74-dev=1.74.0-14+b1 libbrotli1=1.0.9-2+b3 libbsd0=0.11.6-1 libbz2-1.0=1.0.8-5 libbz2-dev=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dev=2.33-7 libcairo-gobject2=1.16.0-5 libcairo2=1.16.0-5 libcap-ng0=0.7.9-2.2+b2 libcap2=1:2.44-1 libcc1-0=12.1.0-1 libclass-c3-perl=0.35-1 libclass-load-perl=0.25-1 libclass-load-xs-perl=0.10-1+b6 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38-4 libctf0=2.38-4 libcurl3-gnutls=7.83.1-1 libcurl4=7.83.1-1 libdata-optlist-perl=0.112-1 libdatrie1=0.2.13-2 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.262 libdebhelper-perl=13.7.1 libdeflate0=1.10-2 libdevel-callchecker-perl=0.008-1+b3 libdevel-globaldestruction-perl=0.14-1.1 libdevel-overloadinfo-perl=0.007-1 libdevel-stacktrace-perl=2.0400-1 libdist-checkconflicts-perl=0.11-1.1 libdpkg-perl=1.21.7 libdynaloader-functions-perl=0.003-1.1 libelf1=0.187-1 libencode-locale-perl=1.05-1.1 libeval-closure-perl=0.14-1 libexpat1=2.4.8-1 libffi8=3.4.2-4 libfile-stripnondeterminism-perl=1.13.0-1 libfile-which-perl=1.27-1 libfontconfig1=2.13.1-4.4 libfreetype6=2.12.0+dfsg-1 libfribidi0=1.0.8-2.1 libgcc-11-dev=11.3.0-1 libgcc-s1=12.1.0-1 libgcrypt20=1.10.1-2 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgdk-pixbuf-2.0-0=2.42.8+dfsg-1 libgdk-pixbuf2.0-common=2.42.8+dfsg-1 libgfortran-11-dev=11.3.0-1 libgfortran5=12.1.0-1 libglib2.0-0=2.72.1-1 libgmp10=2:6.2.1+dfsg-3 libgnutls30=3.7.4-2 libgomp1=12.1.0-1 libgpg-error0=1.45-2 libgraphite2-3=1.3.14-1 libgssapi-krb5-2=1.19.2-2+b1 libharfbuzz0b=2.7.4-1+b1 libhogweed6=3.7.3-1 libhttp-date-perl=6.05-1 libhttp-message-perl=6.36-1 libice6=2:1.0.10-1 libicu-dev=71.1-3 libicu71=71.1-3 libidn2-0=2.3.2-2 libio-html-perl=1.004-3 libisl23=0.24-2 libitm1=12.1.0-1 libjbig0=2.1-3.1+b2 libjpeg-dev=1:2.1.2-1 libjpeg62-turbo=1:2.1.2-1 libjpeg62-turbo-dev=1:2.1.2-1 libjs-bootstrap=3.4.1+dfsg-2 libjs-d3=3.5.17-4 libjs-es5-shim=4.6.6-1 libjs-highlight.js=9.18.5+dfsg1-2 libjs-jquery=3.6.0+dfsg+~3.5.13-1 libjs-jquery-datatables=1.11.5+dfsg-2 libjs-jquery-datatables-extensions=0.0+git20150910.28fd64e+dfsg-5 libjs-jquery-selectize.js=0.12.6+dfsg-1.1 libjs-jquery-ui=1.13.1+dfsg-1 libjs-json=0~20210531+~1.0.8-1 libjs-microplugin.js=0.0.3+dfsg-1.1 libjs-sifter.js=0.6.0+dfsg-2 libjs-twitter-bootstrap-datepicker=1.3.1+dfsg1-4.1 libk5crypto3=1.19.2-2+b1 libkeyutils1=1.6.1-3 libkrb5-3=1.19.2-2+b1 libkrb5support0=1.19.2-2+b1 liblapack-dev=3.10.1-1 liblapack3=3.10.1-1 libldap-2.5-0=2.5.12+dfsg-1 liblsan0=12.1.0-1 liblwp-mediatypes-perl=6.04-1 liblz4-1=1.9.3-2 liblzma-dev=5.2.5-2.1 liblzma5=5.2.5-2.1 libmagic-mgc=1:5.41-4 libmagic1=1:5.41-4 libmd0=1.0.4-1 libmodule-implementation-perl=0.09-1.1 libmodule-runtime-conflicts-perl=0.003-1.1 libmodule-runtime-perl=0.016-1 libmoose-perl=2.2200-1+b1 libmount1=2.38-4 libmpc3=1.2.1-2 libmpfr6=4.1.0-3 libmro-compat-perl=0.15-1 libnamespace-clean-perl=0.27-1 libncurses-dev=6.3+20220423-2 libncurses5-dev=6.3+20220423-2 libncurses6=6.3+20220423-2 libncursesw6=6.3+20220423-2 libnettle8=3.7.3-1 libnghttp2-14=1.47.0-1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libp11-kit0=0.24.1-1 libpackage-deprecationmanager-perl=0.17-1.1 libpackage-stash-perl=0.40-1 libpackage-stash-xs-perl=0.29-1+b3 libpam-modules=1.4.0-13 libpam-modules-bin=1.4.0-13 libpam-runtime=1.4.0-13 libpam0g=1.4.0-13 libpango-1.0-0=1.50.7+ds-1 libpangocairo-1.0-0=1.50.7+ds-1 libpangoft2-1.0-0=1.50.7+ds-1 libpaper-utils=1.1.28+b1 libpaper1=1.1.28+b1 libparams-classify-perl=0.015-1+b4 libparams-util-perl=1.102-1+b2 libpcre16-3=2:8.39-14 libpcre2-16-0=10.40-1 libpcre2-32-0=10.40-1 libpcre2-8-0=10.40-1 libpcre2-dev=10.40-1 libpcre2-posix3=10.40-1 libpcre3=2:8.39-14 libpcre3-dev=2:8.39-14 libpcre32-3=2:8.39-14 libpcrecpp0v5=2:8.39-14 libperl5.34=5.34.0-4 libpipeline1=1.5.6-1 libpixman-1-0=0.40.0-1 libpng-dev=1.6.37-5 libpng16-16=1.6.37-5 libpsl5=0.21.0-1.2 libquadmath0=12.1.0-1 libreadline-dev=8.1.2-1.2 libreadline8=8.1.2-1.2 librsvg2-2=2.52.5+dfsg-3+b1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.28+dfsg-4 libsasl2-modules-db=2.1.28+dfsg-4 libscalar-list-utils-perl=1:1.62-1 libseccomp2=2.5.4-1 libselinux1=3.3-1+b2 libsigsegv2=2.14-1 libsm6=2:1.2.3-1 libsmartcols1=2.38-4 libssh2-1=1.10.0-3 libssl1.1=1.1.1o-1 libstdc++-11-dev=11.3.0-1 libstdc++6=12.1.0-1 libsub-exporter-perl=0.988-1 libsub-exporter-progressive-perl=0.001013-1 libsub-identify-perl=0.14-1+b4 libsub-install-perl=0.928-1.1 libsub-name-perl=0.26-1+b2 libsub-override-perl=0.09-2 libswitch-perl=2.17-2.1 libsystemd0=250.4-1 libtasn1-6=4.18.0-4 libtcl8.6=8.6.12+dfsg-1 libthai-data=0.1.29-1 libthai0=0.1.29-1 libtiff5=4.3.0-7 libtimedate-perl=2.3300-2 libtinfo6=6.3+20220423-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtk8.6=8.6.12-1 libtool=2.4.7-4 libtry-tiny-perl=0.31-1 libtsan0=11.3.0-1 libubsan1=12.1.0-1 libuchardet0=0.0.7-1 libudev1=250.4-1 libunistring2=1.0-1 liburi-perl=5.10-1 libuuid1=2.38-4 libuv1=1.44.1-2 libvariable-magic-perl=0.62-1+b4 libwebp7=1.2.2-2+b1 libwww-curl-perl=4.17-7+b2 libwww-curl-simple-perl=0.100191-2 libx11-6=2:1.7.5-1 libx11-data=2:1.7.5-1 libxau6=1:1.0.9-1 libxcb-render0=1.14-3 libxcb-shm0=1.14-3 libxcb1=1.14-3 libxdmcp6=1:1.1.2-3 libxext6=2:1.3.4-1 libxft2=2.3.4-1 libxml2=2.9.14+dfsg-1 libxmuu1=2:1.1.3-3 libxrender1=1:0.9.10-1 libxss1=1:1.2.3-1 libxt6=1:1.2.1-1 libzstd1=1.5.2+dfsg-1 linux-libc-dev=5.17.3-1 login=1:4.11.1+dfsg1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.2-1 mawk=1.3.4.20200120-3+b1 ncurses-base=6.3+20220423-2 ncurses-bin=6.3+20220423-2 node-html5shiv=3.7.3+dfsg-4 node-normalize.css=8.0.1-5 openssl=1.1.1o-1 patch=2.7.6-7 perl=5.34.0-4 perl-base=5.34.0-4 perl-modules-5.34=5.34.0-4 pkg-config=0.29.2-1 po-debconf=1.0.21+nmu1 r-base-core=4.2.0-1+b1 r-base-dev=4.2.0-1 r-bioc-biocgenerics=0.42.0-1 r-bioc-chemminer=3.48.0+dfsg-1 r-cran-base64enc=0.1-3-3 r-cran-bh=1.74.0-2 r-cran-bitops=1.0-7-1 r-cran-cli=3.3.0-1 r-cran-colorspace=2.0-3+dfsg-1 r-cran-commonmark=1.8.0-1 r-cran-crayon=1.5.1-1 r-cran-crosstalk=1.2.0+dfsg-1 r-cran-dbi=1.1.2-1 r-cran-digest=0.6.29-1 r-cran-dt=0.17+dfsg-3 r-cran-ellipsis=0.3.2-2 r-cran-fansi=1.0.3-1 r-cran-farver=2.1.0-1 r-cran-fastmap=1.1.0-1 r-cran-ggplot2=3.3.6+dfsg-1 r-cran-glue=1.6.2-1 r-cran-gridextra=2.3-3 r-cran-gtable=0.3.0+dfsg-2 r-cran-htmltools=0.5.2-1 r-cran-htmlwidgets=1.5.4+dfsg-1 r-cran-httpuv=1.6.5+dfsg-1 r-cran-isoband=0.2.5-1 r-cran-jsonlite=1.8.0+dfsg-1 r-cran-labeling=0.4.2-1 r-cran-later=1.3.0+dfsg-1 r-cran-lattice=0.20-45-3 r-cran-lazyeval=0.2.2-1+b1 r-cran-lifecycle=1.0.1-1 r-cran-littler=0.3.15-1 r-cran-magrittr=2.0.3-1 r-cran-mass=7.3-57-1 r-cran-matrix=1.4-1-1 r-cran-mgcv=1.8-40-1 r-cran-mime=0.12-1 r-cran-munsell=0.5.0-2 r-cran-nlme=3.1.157-1 r-cran-pillar=1.7.0+dfsg-1 r-cran-pkgconfig=2.0.3-2 r-cran-pkgkitten=0.2.2-2 r-cran-png=0.1-7-4 r-cran-promises=1.2.0.1+dfsg-1 r-cran-r6=2.5.1-1 r-cran-rcolorbrewer=1.1-3-1 r-cran-rcpp=1.0.8.3-1 r-cran-rcurl=1.98-1.6-1 r-cran-rjson=0.2.21-1 r-cran-rlang=1.0.2-1 r-cran-rsvg=2.2.0-1 r-cran-runit=0.4.32-3 r-cran-scales=1.2.0-1 r-cran-shiny=1.5.0+dfsg-2 r-cran-sourcetools=0.1.7-3 r-cran-stringi=1.7.6-1+b2 r-cran-tibble=3.1.7+dfsg-1 r-cran-utf8=1.2.2-1 r-cran-vctrs=0.4.1-1 r-cran-viridislite=0.4.0-2 r-cran-withr=2.5.0-1 r-cran-xtable=1:1.8-4-2 r-cran-yaml=2.3.5-1 readline-common=8.1.2-1.2 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 shared-mime-info=2.2-1 sysvinit-utils=3.03-1 tar=1.34+dfsg-1 tzdata=2022a-1 ucf=3.0043 unzip=6.0-26 util-linux=2.38-4 util-linux-extra=2.38-4 x11-common=1:7.7+23 xauth=1:1.1.1-1 xdg-utils=1.1.3-4.1 xz-utils=5.2.5-2.1 zip=3.0-12 zlib1g=1:1.2.11.dfsg-4 zlib1g-dev=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220524T030904Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220524T030904Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220629T093945Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220511T204932Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d r-bioc-fmcsr=1.38.0+dfsg-1 && mkdir -p /build/r-bioc-fmcsr-Ybtehi && dpkg-source --no-check -x /*.dsc /build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0+dfsg && chown -R builduser:builduser /build/r-bioc-fmcsr-Ybtehi" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1652436928" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/r-bioc-fmcsr-Ybtehi /tmp/r-bioc-fmcsr-1.38.0+dfsg-1vyltcrn7 bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.RGVJksKwk4 as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.RGVJksKwk4 Reading package lists... Building dependency tree... util-linux is already the newest version (2.38-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 135 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable/main amd64 libfakeroot amd64 1.28-1 [48.2 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable/main amd64 fakeroot amd64 1.28-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 135 kB in 0s (1009 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4628 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.28-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.28-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.28-1_amd64.deb ... Unpacking fakeroot (1.28-1) ... Setting up libfakeroot:amd64 (1.28-1) ... Setting up fakeroot (1.28-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220524T030904Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220524T030904Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220629T093945Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220511T204932Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.RGVJksKwk4 Get:1 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm InRelease [130 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220629T093945Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm/main Sources [12.0 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm/main amd64 Packages [11.5 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220629T093945Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220629T093945Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220629T093945Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220629T093945Z unstable/main amd64 Packages [12.5 MB] Fetched 36.2 MB in 30s (1218 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.RGVJksKwk4 I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d r-bioc-fmcsr=1.38.0+dfsg-1 && mkdir -p /build/r-bioc-fmcsr-Ybtehi && dpkg-source --no-check -x /*.dsc /build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0+dfsg && chown -R builduser:builduser /build/r-bioc-fmcsr-Ybtehi"' exec /tmp/mmdebstrap.RGVJksKwk4 Reading package lists... NOTICE: 'r-bioc-fmcsr' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/r-pkg-team/r-bioc-fmcsr.git Please use: git clone https://salsa.debian.org/r-pkg-team/r-bioc-fmcsr.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 73.3 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm/main r-bioc-fmcsr 1.38.0+dfsg-1 (dsc) [2121 B] Get:2 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm/main r-bioc-fmcsr 1.38.0+dfsg-1 (tar) [65.3 kB] Get:3 http://snapshot.notset.fr/archive/debian/20220524T030904Z bookworm/main r-bioc-fmcsr 1.38.0+dfsg-1 (diff) [5876 B] Fetched 73.3 kB in 0s (828 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'r-bioc-fmcsr_1.38.0+dfsg-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting r-bioc-fmcsr in /build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0+dfsg dpkg-source: info: unpacking r-bioc-fmcsr_1.38.0+dfsg.orig.tar.xz dpkg-source: info: unpacking r-bioc-fmcsr_1.38.0+dfsg-1.debian.tar.xz I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1652436928" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.RGVJksKwk4 dpkg-buildpackage: info: source package r-bioc-fmcsr dpkg-buildpackage: info: source version 1.38.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary-arch dh binary-arch --buildsystem R dh_update_autotools_config -a -O--buildsystem=R dh_autoreconf -a -O--buildsystem=R configure.ac:32: warning: AC_OUTPUT should be used without arguments. configure.ac:32: You should run autoupdate. dh_auto_configure -a -O--buildsystem=R dh_auto_build -a -O--buildsystem=R dh: command-omitted: The call to "dh_auto_test -a -O--buildsystem=R" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=R dh_prep -a -O--buildsystem=R dh_auto_install --destdir=debian/r-bioc-fmcsr/ -a -O--buildsystem=R I: R Package: fmcsR Version: 1.38.0 I: Building using R version 4.2.0-1 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Fri, 13 May 2022 12:15:28 +0200 mkdir -p /build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0\+dfsg/debian/r-bioc-fmcsr/usr/lib/R/site-library R CMD INSTALL -l /build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0\+dfsg/debian/r-bioc-fmcsr/usr/lib/R/site-library --clean . "--built-timestamp='Fri, 13 May 2022 12:15:28 +0200'" * installing *source* package ‘fmcsR’ ... ** using staged installation checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for inline... inline checking for size_t... yes checking for alarm... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating config.h ** libs make[1]: Entering directory '/build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0+dfsg/src' g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c MCS.cpp -o MCS.o g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c MCSCompound.cpp -o MCSCompound.o g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c MCSMap.cpp -o MCSMap.o g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c MCSRingDetector.cpp -o MCSRingDetector.o g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fmcs_R_wrap.cpp -o fmcs_R_wrap.o g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-eH67wr/r-base-4.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c util.cpp -o util.o g++ -std=gnu++14 -shared -L/usr/lib/R/lib -Wl,-z,relro -o fmcsR.so MCS.o MCSCompound.o MCSMap.o MCSRingDetector.o fmcs_R_wrap.o util.o -L/usr/lib/R/lib -lR make[1]: Leaving directory '/build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0+dfsg/src' make[1]: Entering directory '/build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0+dfsg/src' make[1]: Leaving directory '/build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0+dfsg/src' installing to /build/r-bioc-fmcsr-Ybtehi/r-bioc-fmcsr-1.38.0+dfsg/debian/r-bioc-fmcsr/usr/lib/R/site-library/00LOCK-r-bioc-fmcsr-1.38.0+dfsg/00new/fmcsR/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fmcsR) Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 300. Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 301. Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 304. W: Ignoring specified R dependency: R (>= 2.10.0) I: Using r-bioc-chemminer for Depends:ChemmineR I: Using r-bioc-biocstyle for Suggests:BiocStyle I: Using r-cran-knitr for Suggests:knitr W: Cannot find a debian package for Suggests:knitcitations W: Cannot find a debian package for Suggests:knitrBootstrap I: Using r-cran-rmarkdown for Suggests:rmarkdown I: Using r-cran-runit for Imports:RUnit I: Using r-bioc-chemminer for Imports:ChemmineR I: Using r-bioc-biocgenerics for Imports:BiocGenerics I: BioConductor API version: r-api-bioc-3.15 I: Use r-bioc-fmcsr as Debian binary package for variables substitution dh_installdocs -a -O--buildsystem=R dh_installchangelogs -a -O--buildsystem=R dh_installsystemduser -a -O--buildsystem=R dh_perl -a -O--buildsystem=R dh_link -a -O--buildsystem=R dh_strip_nondeterminism -a -O--buildsystem=R dh_compress -a -O--buildsystem=R dh_fixperms -a -O--buildsystem=R dh_missing -a -O--buildsystem=R dh_dwz -a -O--buildsystem=R dh_strip -a -O--buildsystem=R dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -a -O--buildsystem=R dh_gencontrol -a -O--buildsystem=R dh_md5sums -a -O--buildsystem=R dh_builddeb -a -O--buildsystem=R dpkg-deb: building package 'r-bioc-fmcsr' in '../r-bioc-fmcsr_1.38.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'r-bioc-fmcsr-dbgsym' in '../r-bioc-fmcsr-dbgsym_1.38.0+dfsg-1_amd64.deb'. dpkg-genbuildinfo --build=any -O../r-bioc-fmcsr_1.38.0+dfsg-1_amd64.buildinfo dpkg-genchanges --build=any -O../r-bioc-fmcsr_1.38.0+dfsg-1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/r-bioc-fmcsr-Ybtehi /tmp/r-bioc-fmcsr-1.38.0+dfsg-1vyltcrn7 I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.RGVJksKwk4... I: success in 515.6315 seconds md5: r-bioc-fmcsr-dbgsym_1.38.0+dfsg-1_amd64.deb: OK md5: r-bioc-fmcsr_1.38.0+dfsg-1_amd64.deb: OK sha1: r-bioc-fmcsr-dbgsym_1.38.0+dfsg-1_amd64.deb: OK sha1: r-bioc-fmcsr_1.38.0+dfsg-1_amd64.deb: OK sha256: r-bioc-fmcsr-dbgsym_1.38.0+dfsg-1_amd64.deb: OK sha256: r-bioc-fmcsr_1.38.0+dfsg-1_amd64.deb: OK Checksums: OK