Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/p/python-pymummer/python-pymummer_0.11.0-2_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/python-pymummer-0.11.0-2ldit2yg2/python-pymummer_0.11.0-2_all.buildinfo Get source package info: python-pymummer=0.11.0-2 Source URL: http://snapshot.notset.fr/mr/package/python-pymummer/0.11.0-2/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11.1 automake=1:1.16.2-3 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.47 bash=5.0-7 binutils=2.35-2 binutils-common=2.35-2 binutils-x86-64-linux-gnu=2.35-2 bsdextrautils=2.36-2 bsdutils=1:2.36-2 build-essential=12.8 bzip2=1.0.8-4 coreutils=8.32-3 cpp=4:10.1.0-1 cpp-10=10.2.0-5 dash=0.5.10.2-7 debconf=1.5.74 debhelper=13.2 debianutils=4.11.1 dh-autoreconf=19 dh-python=4.20200804 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13-5 fastaq=3.17.0-3 file=1:5.38-5 findutils=4.7.0-1 g++=4:10.1.0-1 g++-10=10.2.0-5 gawk=1:5.0.1+dfsg-1 gcc=4:10.1.0-1 gcc-10=10.2.0-5 gcc-10-base=10.2.0-5 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 grep=3.4-1 groff-base=1.22.4-5 gzip=1.10-2 hostname=3.23 init-system-helpers=1.58 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libasan6=10.2.0-5 libatomic1=10.2.0-5 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3 libaudit1=1:2.8.5-3+b1 libbinutils=2.35-2 libblkid1=2.36-2 libbrotli1=1.0.7-7 libbz2-1.0=1.0.8-4 libc-bin=2.31-3 libc-dev-bin=2.31-3 libc6=2.31-3 libc6-dev=2.31-3 libcap-ng0=0.7.9-2.2 libcc1-0=10.2.0-5 libcom-err2=1.45.6-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35-2 libctf0=2.35-2 libcurl3-gnutls=7.72.0-1 libdb5.3=5.3.28+dfsg1-0.6 libdebconfclient0=0.253 libdebhelper-perl=13.2 libdeflate0=1.6-1 libdpkg-perl=1.20.5 libelf1=0.180-1+b1 libexpat1=2.2.9-1 libffi7=3.3-4 libfile-stripnondeterminism-perl=1.9.0-1 libgcc-10-dev=10.2.0-5 libgcc-s1=10.2.0-5 libgcrypt20=1.8.6-2 libgdbm-compat4=1.18.1-5.1 libgdbm6=1.18.1-5.1 libglib2.0-0=2.64.4-1 libgmp10=2:6.2.0+dfsg-6 libgnutls30=3.6.14-2+b1 libgomp1=10.2.0-5 libgpg-error0=1.38-2 libgssapi-krb5-2=1.17-10 libhogweed6=3.6-2 libhts3=1.10.2-5 libicu67=67.1-4 libidn2-0=2.3.0-1 libisl22=0.22.1-1 libitm1=10.2.0-5 libk5crypto3=1.17-10 libkeyutils1=1.6.1-2 libkrb5-3=1.17-10 libkrb5support0=1.17-10 libldap-2.4-2=2.4.51+dfsg-1 liblsan0=10.2.0-5 liblz4-1=1.9.2-2 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.38-5 libmagic1=1:5.38-5 libmount1=2.36-2 libmpc3=1.2.0~rc1-1 libmpfr6=4.1.0-3 libncurses6=6.2-1 libncursesw6=6.2-1 libnettle8=3.6-2 libnghttp2-14=1.41.0-3 libp11-kit0=0.23.21-2 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpcre2-8-0=10.34-7 libpcre3=2:8.39-13 libperl5.30=5.30.3-4 libpipeline1=1.5.3-1 libpsl5=0.21.0-1.1 libpython3-stdlib=3.8.2-3 libpython3.8-minimal=3.8.5-2 libpython3.8-stdlib=3.8.5-2 libquadmath0=10.2.0-5 libreadline8=8.0-4 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.27+dfsg-2 libsasl2-modules-db=2.1.27+dfsg-2 libseccomp2=2.4.3-1+b1 libselinux1=3.1-2 libsigsegv2=2.12-2 libsmartcols1=2.36-2 libsqlite3-0=3.33.0-1 libssh2-1=1.8.0-2.1 libssl1.1=1.1.1g-1 libstdc++-10-dev=10.2.0-5 libstdc++6=10.2.0-5 libsub-override-perl=0.09-2 libsystemd0=246.2-1 libtasn1-6=4.16.0-2 libtinfo6=6.2-1 libtool=2.4.6-14 libtsan0=10.2.0-5 libubsan1=10.2.0-5 libuchardet0=0.0.7-1 libudev1=246.2-1 libunistring2=0.9.10-4 libuuid1=2.36-2 libxml2=2.9.10+dfsg-5+b1 libzstd1=1.4.5+dfsg-4 linux-libc-dev=5.7.17-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 mime-support=3.64 mummer=3.23+dfsg-6 ncurses-base=6.2-1 ncurses-bin=6.2-1 patch=2.7.6-6 perl=5.30.3-4 perl-base=5.30.3-4 perl-modules-5.30=5.30.3-4 po-debconf=1.0.21 python3=3.8.2-3 python3-all=3.8.2-3 python3-distutils=3.8.5-1 python3-lib2to3=3.8.5-1 python3-minimal=3.8.2-3 python3-nose=1.3.7-7 python3-pkg-resources=49.3.1-2 python3-setuptools=49.3.1-2 python3.8=3.8.5-2 python3.8-minimal=3.8.5-2 readline-common=8.0-4 samtools=1.10-4 sed=4.7-1 sensible-utils=0.0.12+nmu1 sysvinit-utils=2.96-4 tar=1.30+dfsg-7 util-linux=2.36-2 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20200829T084349Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d python-pymummer=0.11.0-2 && mkdir -p /build/python-pymummer-9uaPoo && dpkg-source --no-check -x /*.dsc /build/python-pymummer-9uaPoo/python-pymummer-0.11.0 && chown -R builduser:builduser /build/python-pymummer-9uaPoo" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/python-pymummer-9uaPoo/python-pymummer-0.11.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1598626734" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/python-pymummer-9uaPoo /tmp/python-pymummer-0.11.0-2ldit2yg2 bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20200829T084349Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.gTWgwERVeb as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.gTWgwERVeb Reading package lists... Building dependency tree... util-linux is already the newest version (2.36-2). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 132 kB of archives. After this operation, 393 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20200829T084349Z unstable/main amd64 libfakeroot amd64 1.24-1 [45.7 kB] Get:2 http://snapshot.notset.fr/archive/debian/20200829T084349Z unstable/main amd64 fakeroot amd64 1.24-1 [85.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 132 kB in 0s (681 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4577 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.24-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.24-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.24-1_amd64.deb ... Unpacking fakeroot (1.24-1) ... Setting up libfakeroot:amd64 (1.24-1) ... Setting up fakeroot (1.24-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-3) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20200829T084349Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.gTWgwERVeb Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20200829T084349Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 22s (1034 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.gTWgwERVeb I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d python-pymummer=0.11.0-2 && mkdir -p /build/python-pymummer-9uaPoo && dpkg-source --no-check -x /*.dsc /build/python-pymummer-9uaPoo/python-pymummer-0.11.0 && chown -R builduser:builduser /build/python-pymummer-9uaPoo"' exec /tmp/mmdebstrap.gTWgwERVeb Reading package lists... NOTICE: 'python-pymummer' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-pymummer.git Please use: git clone https://salsa.debian.org/med-team/python-pymummer.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 34.4 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main python-pymummer 0.11.0-2 (dsc) [2262 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main python-pymummer 0.11.0-2 (tar) [29.3 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main python-pymummer 0.11.0-2 (diff) [2772 B] Fetched 34.4 kB in 0s (540 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'python-pymummer_0.11.0-2.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting python-pymummer in /build/python-pymummer-9uaPoo/python-pymummer-0.11.0 dpkg-source: info: unpacking python-pymummer_0.11.0.orig.tar.gz dpkg-source: info: unpacking python-pymummer_0.11.0-2.debian.tar.xz I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/python-pymummer-9uaPoo/python-pymummer-0.11.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1598626734" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.gTWgwERVeb dpkg-buildpackage: info: source package python-pymummer dpkg-buildpackage: info: source version 0.11.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . debian/rules clean LC_ALL=C.UTF-8 dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/python-pymummer-9uaPoo/python-pymummer-0.11.0' rm -f pymummer.egg-info/PKG-INFO pymummer.egg-info/SOURCES.txt pymummer.egg-info/dependency_links.txt pymummer.egg-info/requires.txt pymummer.egg-info/top_level.txt rm -rf .pybuild pymummer/tests/__pycache__ pymummer/__pycache__ make[1]: Leaving directory '/build/python-pymummer-9uaPoo/python-pymummer-0.11.0' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-indep LC_ALL=C.UTF-8 dh binary-indep --with python3 --buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_autoreconf -i -O--buildsystem=pybuild dh_auto_configure -i -O--buildsystem=pybuild I: pybuild base:217: python3.8 setup.py config Checking MUMmer programs found in path: OK nucmer OK show-coords OK show-snps OK delta-filter running config dh_auto_build -i -O--buildsystem=pybuild I: pybuild base:217: /usr/bin/python3 setup.py build Checking MUMmer programs found in path: OK nucmer OK show-coords OK show-snps OK delta-filter running build running build_py creating /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer copying pymummer/__init__.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer copying pymummer/coords_file.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer copying pymummer/alignment.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer copying pymummer/variant.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer copying pymummer/nucmer.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer copying pymummer/snp_file.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer copying pymummer/syscall.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer copying pymummer/snp.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer debian/rules override_dh_auto_test make[1]: Entering directory '/build/python-pymummer-9uaPoo/python-pymummer-0.11.0' PYBUILD_SYSTEM=custom \ PYBUILD_TEST_ARGS="{interpreter} setup.py test" \ dh_auto_test I: pybuild base:217: python3.8 setup.py test Checking MUMmer programs found in path: OK nucmer OK show-coords OK show-snps OK delta-filter running test WARNING: Testing via this command is deprecated and will be removed in a future version. Users looking for a generic test entry point independent of test runner are encouraged to use tox. running egg_info creating pymummer.egg-info writing pymummer.egg-info/PKG-INFO writing dependency_links to pymummer.egg-info/dependency_links.txt writing requirements to pymummer.egg-info/requires.txt writing top-level names to pymummer.egg-info/top_level.txt writing manifest file 'pymummer.egg-info/SOURCES.txt' reading manifest file 'pymummer.egg-info/SOURCES.txt' writing manifest file 'pymummer.egg-info/SOURCES.txt' running build_ext test_init_nucmer (alignment_test.TestNucmer) test __init__ nucmer ... ok test_init_promer (alignment_test.TestNucmer) test __init__ promer ... ok test_intersects_variant (alignment_test.TestNucmer) Test intersects_variant ... ok test_is_self_hit (alignment_test.TestNucmer) Test is_self_hit ... ok test_on_same_strand (alignment_test.TestNucmer) test on_same_strand ... ok test_qry_coords (alignment_test.TestNucmer) Test qry_coords ... ok test_qry_coords_from_ref_coord_test_bad_ref_coord (alignment_test.TestNucmer) Test qry_coords_from_ref_coord with bad ref coords ... ok test_qry_coords_from_ref_coord_test_different_strand (alignment_test.TestNucmer) Test qry_coords_from_ref_coord on different strand ... ok test_qry_coords_from_ref_coord_test_same_strand (alignment_test.TestNucmer) Test qry_coords_from_ref_coord on same strand ... ok test_qry_coords_from_ref_coord_when_variant_not_in_nucmer_match (alignment_test.TestNucmer) Test ref_coords_from_qry_coord when variant not in nucmer match ... ok test_ref_coords (alignment_test.TestNucmer) Test ref_coords ... ok test_ref_coords_from_qry_coord_test_same_strand (alignment_test.TestNucmer) Test ref_coords_from_qry_coord on same strand ... ok test_ref_coords_from_qry_coord_when_variant_not_in_nucmer_match (alignment_test.TestNucmer) Test ref_coords_from_qry_coord when variant not in nucmer match ... ok test_reverse_query (alignment_test.TestNucmer) Test reverse_query ... ok test_reverse_reference (alignment_test.TestNucmer) Test reverse_reference ... ok test_str (alignment_test.TestNucmer) Test __str__ ... ok test_swap (alignment_test.TestNucmer) test swap ... ok test_to_msp_crunch (alignment_test.TestNucmer) Test to_msp_crunch ... ok test_convert_to_msp_crunch_no_offset (coords_file_test.TestCoordsFile) Test convert_to_msp_crunch with no offsets ... ok test_convert_to_msp_crunch_with_offset (coords_file_test.TestCoordsFile) Test convert_to_msp_crunch with offsets ... ok test_coords_file (coords_file_test.TestCoordsFile) test coords_file ... ok test_delta_filter_command (nucmer_test.TestRunner) test _delta_filter_command ... ok test_nucmer_command (nucmer_test.TestRunner) test _nucmer_command ... ok test_run_nucmer (nucmer_test.TestRunner) test run_nucmer ... ok test_show_coords_command (nucmer_test.TestRunner) test _show_coords_command ... ok test_show_snps_command (nucmer_test.TestRunner) test _show_snps_command ... ok test_write_script_no_snps (nucmer_test.TestRunner) test _write_script no snps ... ok test_write_script_with_snps (nucmer_test.TestRunner) test _write_script with snps ... ok test_get_all_variants (snp_file_test.TestUtils) Test load all variants from file ... ok test_snp_file (snp_file_test.TestUtils) test coords_file ... ok test_str_no_c_option (snp_test.TestSnp) Test __str__ with format with no -C option ... ok test_str_with_c_option (snp_test.TestSnp) Test __str__ with format with -C option ... ok test_run_fail (syscall_test.TestSyscall) Test that run raises error when command fails ... The following command failed with exit code 127 notacommandandthrowerror The output was: /bin/sh: 1: notacommandandthrowerror: not found ok test_run_ok (syscall_test.TestSyscall) Test run is ok on command that works ... ok test_init (variant_test.TestVariant) Test init gets correct variant type ... ok test_update_indel_deletion (variant_test.TestVariant) Test update_indel extends deletions correctly ... ok test_update_indel_insertion (variant_test.TestVariant) Test update_indel extends insertions correctly ... ok test_update_indel_no_change (variant_test.TestVariant) Test update_indel does nothing in the right cases ... ok ---------------------------------------------------------------------- Ran 38 tests in 0.236s OK make[1]: Leaving directory '/build/python-pymummer-9uaPoo/python-pymummer-0.11.0' create-stamp debian/debhelper-build-stamp dh_testroot -i -O--buildsystem=pybuild dh_prep -i -O--buildsystem=pybuild dh_auto_install -i -O--buildsystem=pybuild I: pybuild base:217: /usr/bin/python3 setup.py install --root /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer Checking MUMmer programs found in path: OK nucmer OK show-coords OK show-snps OK delta-filter running install running build running build_py running install_lib creating /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr creating /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib creating /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8 creating /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages creating /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer copying /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer/__init__.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer copying /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer/coords_file.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer copying /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer/alignment.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer copying /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer/variant.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer copying /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer/nucmer.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer copying /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer/snp_file.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer copying /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer/syscall.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer copying /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/.pybuild/cpython3_3.8_pymummer/build/pymummer/snp.py -> /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer byte-compiling /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer/__init__.py to __init__.cpython-38.pyc byte-compiling /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer/coords_file.py to coords_file.cpython-38.pyc byte-compiling /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer/alignment.py to alignment.cpython-38.pyc byte-compiling /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer/variant.py to variant.cpython-38.pyc byte-compiling /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer/nucmer.py to nucmer.cpython-38.pyc byte-compiling /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer/snp_file.py to snp_file.cpython-38.pyc byte-compiling /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer/syscall.py to syscall.cpython-38.pyc byte-compiling /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer/snp.py to snp.cpython-38.pyc running install_egg_info running egg_info writing pymummer.egg-info/PKG-INFO writing dependency_links to pymummer.egg-info/dependency_links.txt writing requirements to pymummer.egg-info/requires.txt writing top-level names to pymummer.egg-info/top_level.txt reading manifest file 'pymummer.egg-info/SOURCES.txt' writing manifest file 'pymummer.egg-info/SOURCES.txt' Copying pymummer.egg-info to /build/python-pymummer-9uaPoo/python-pymummer-0.11.0/debian/python3-pymummer/usr/lib/python3.8/dist-packages/pymummer-0.11.0.egg-info Skipping SOURCES.txt running install_scripts dh_installdocs -i -O--buildsystem=pybuild dh_installchangelogs -i -O--buildsystem=pybuild dh_python3 -i -O--buildsystem=pybuild dh_installsystemduser -i -O--buildsystem=pybuild dh_perl -i -O--buildsystem=pybuild dh_link -i -O--buildsystem=pybuild dh_strip_nondeterminism -i -O--buildsystem=pybuild dh_compress -i -O--buildsystem=pybuild dh_fixperms -i -O--buildsystem=pybuild dh_missing -i -O--buildsystem=pybuild dh_installdeb -i -O--buildsystem=pybuild dh_gencontrol -i -O--buildsystem=pybuild dh_md5sums -i -O--buildsystem=pybuild dh_builddeb -i -O--buildsystem=pybuild dpkg-deb: building package 'python3-pymummer' in '../python3-pymummer_0.11.0-2_all.deb'. dpkg-genbuildinfo --build=all dpkg-genchanges --build=all >../python-pymummer_0.11.0-2_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/python-pymummer-9uaPoo /tmp/python-pymummer-0.11.0-2ldit2yg2 I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.gTWgwERVeb... I: success in 323.1366 seconds md5: python3-pymummer_0.11.0-2_all.deb: OK sha1: python3-pymummer_0.11.0-2_all.deb: OK sha256: python3-pymummer_0.11.0-2_all.deb: OK Checksums: OK