Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/p/python-pbcore/python-pbcore_2.1.2+dfsg-2_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/python-pbcore-2.1.2+dfsg-2f7m3v890/python-pbcore_2.1.2+dfsg-2_all.buildinfo Get source package info: python-pbcore=2.1.2+dfsg-2 Source URL: http://snapshot.notset.fr/mr/package/python-pbcore/2.1.2+dfsg-2/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.1 autopoint=0.21-4 autotools-dev=20180224.1+nmu1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6 binutils=2.37.90.20220123-2 binutils-common=2.37.90.20220123-2 binutils-x86-64-linux-gnu=2.37.90.20220123-2 bsdextrautils=2.37.3-1+b1 bsdutils=1:2.37.3-1 build-essential=12.9 bzip2=1.0.8-5 ca-certificates=20211016 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.2.0-14 dash=0.5.11+git20210903+057cd650a4ed-3 debconf=1.5.79 debhelper=13.6 debianutils=5.7-0.1 dh-autoreconf=20 dh-python=5.20220119 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 docutils-common=0.17.1+dfsg-2 dpkg=1.21.1 dpkg-dev=1.21.1 dwz=0.14-1 file=1:5.41-2 findutils=4.8.0-1 fonts-urw-base35=20200910-1 g++=4:11.2.0-2 g++-11=11.2.0-14 gcc=4:11.2.0-2 gcc-11=11.2.0-14 gcc-11-base=11.2.0-14 gettext=0.21-4 gettext-base=0.21-4 grep=3.7-1 groff-base=1.22.4-8 gzip=1.10-4 hostname=3.23 init-system-helpers=1.61 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libaec0=1.0.6-1 libarchive-zip-perl=1.68-1 libasan6=11.2.0-14 libatomic1=11.2.0-14 libattr1=1:2.5.1-1 libaudit-common=1:3.0.6-1 libaudit1=1:3.0.6-1+b1 libbinutils=2.37.90.20220123-2 libblas3=3.10.0-2 libblkid1=2.37.3-1 libbrotli1=1.0.9-2+b3 libbsd0=0.11.5-1+b1 libbz2-1.0=1.0.8-5 libc-bin=2.33-4+b1 libc-dev-bin=2.33-4+b1 libc6=2.33-4+b1 libc6-dev=2.33-4+b1 libcap-ng0=0.7.9-2.2+b1 libcap2=1:2.44-1 libcc1-0=11.2.0-14 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.37.90.20220123-2 libctf0=2.37.90.20220123-2 libcurl3-gnutls=7.81.0-1 libcurl4=7.81.0-1 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.261 libdebhelper-perl=13.6 libdeflate0=1.9-1 libdpkg-perl=1.21.1 libedit2=3.1-20210910-1 libelf1=0.186-1 libexpat1=2.4.3-3 libffi8=3.4.2-4 libfile-stripnondeterminism-perl=1.13.0-1 libfreetype6=2.11.1+dfsg-1 libfribidi0=1.0.8-2 libgcc-11-dev=11.2.0-14 libgcc-s1=11.2.0-14 libgcrypt20=1.9.4-5 libgdbm-compat4=1.22-1 libgdbm6=1.22-1 libgfortran5=11.2.0-14 libglib2.0-0=2.70.3-1 libgmp10=2:6.2.1+dfsg-3 libgnutls30=3.7.3-4+b1 libgomp1=11.2.0-14 libgpg-error0=1.43-3 libgraphite2-3=1.3.14-1 libgssapi-krb5-2=1.18.3-7 libharfbuzz0b=2.7.4-1 libhdf5-103-1=1.10.7+repack-4 libhdf5-hl-100=1.10.7+repack-4 libhogweed6=3.7.3-1 libhts3=1.13+ds-2 libhtscodecs2=1.1.1-3+b1 libicu67=67.1-7 libidn2-0=2.3.2-2 libimagequant0=2.17.0-1 libisl23=0.24-2 libitm1=11.2.0-14 libjbig0=2.1-3.1+b2 libjpeg62-turbo=1:2.1.2-1 libjs-jquery=3.5.1+dfsg+~3.5.5-8 libjs-jquery-hotkeys=0~20130707+git2d51e3a9+dfsg-2.1 libjs-jquery-isonscreen=1.2.0-1.1 libjs-jquery-metadata=12-3 libjs-jquery-tablesorter=1:2.31.3+dfsg1-3 libjs-jquery-throttle-debounce=1.1+dfsg.1-1.1 libjs-sphinxdoc=4.3.2-1 libjs-underscore=1.13.2~dfsg-2 libk5crypto3=1.18.3-7 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-7 libkrb5support0=1.18.3-7 liblapack3=3.10.0-2 liblcms2-2=2.12~rc1-2 libldap-2.4-2=2.4.59+dfsg-1 liblsan0=11.2.0-14 liblz4-1=1.9.3-2 liblzf1=3.6-3 liblzma5=5.2.5-2 libmagic-mgc=1:5.41-2 libmagic1=1:5.41-2 libmd0=1.0.4-1 libmount1=2.37.3-1 libmpc3=1.2.1-1 libmpdec3=2.5.1-2 libmpfr6=4.1.0-3 libncursesw6=6.3-2 libnettle8=3.7.3-1 libnghttp2-14=1.43.0-1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libopenjp2-7=2.4.0-6 libp11-kit0=0.24.0-6 libpam-modules=1.4.0-11 libpam-modules-bin=1.4.0-11 libpam-runtime=1.4.0-11 libpam0g=1.4.0-11 libpcre2-8-0=10.39-3 libpcre3=2:8.39-13 libperl5.32=5.32.1-6 libpipeline1=1.5.5-1 libpng16-16=1.6.37-3 libpsl5=0.21.0-1.2 libpython3-stdlib=3.9.8-1 libpython3.10-minimal=3.10.2-1 libpython3.10-stdlib=3.10.2-1 libpython3.9-minimal=3.9.10-1 libpython3.9-stdlib=3.9.10-1 libquadmath0=11.2.0-14 libraqm0=0.7.0-4 libreadline8=8.1.2-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.27+dfsg2-3 libsasl2-modules-db=2.1.27+dfsg2-3 libseccomp2=2.5.3-2 libselinux1=3.3-1+b1 libsigsegv2=2.14-1 libsmartcols1=2.37.3-1 libsqlite3-0=3.37.2-2 libssh2-1=1.10.0-2 libssl1.1=1.1.1m-1 libstdc++-11-dev=11.2.0-14 libstdc++6=11.2.0-14 libsub-override-perl=0.09-2 libsystemd0=250.3-1 libsz2=1.0.6-1 libtasn1-6=4.18.0-4 libtiff5=4.3.0-3 libtinfo6=6.3-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.6-15 libtsan0=11.2.0-14 libubsan1=11.2.0-14 libuchardet0=0.0.7-1 libudev1=250.3-1 libunistring2=0.9.10-6 libuuid1=2.37.3-1 libwebp6=0.6.1-2.1 libwebpdemux2=0.6.1-2.1 libwebpmux3=0.6.1-2.1 libxau6=1:1.0.9-1 libxcb1=1.14-3 libxdmcp6=1:1.1.2-3 libxml2=2.9.12+dfsg-5+b1 libzstd1=1.4.8+dfsg-3 linux-libc-dev=5.15.15-1 login=1:4.8.1-2 lsb-base=11.1.0 m4=1.4.18-5 mailcap=3.70+nmu1 make=4.3-4.1 man-db=2.9.4-4 mawk=1.3.4.20200120-3 media-types=5.0.0 mime-support=3.66 ncurses-base=6.3-2 ncurses-bin=6.3-2 openssl=1.1.1m-1 patch=2.7.6-7 perl=5.32.1-6 perl-base=5.32.1-6 perl-modules-5.32=5.32.1-6 po-debconf=1.0.21+nmu1 pylint=2.12.2-1 python-babel-localedata=2.8.0+dfsg.1-7 python3=3.9.8-1 python3-alabaster=0.7.12-1 python3-all=3.9.8-1 python3-astroid=2.9.3-1 python3-attr=21.2.0-1 python3-babel=2.8.0+dfsg.1-7 python3-biopython=1.79+dfsg-1+b1 python3-certifi=2020.6.20-1 python3-chardet=4.0.0-1 python3-cov-core=1.15.0-3 python3-coverage=6.2+dfsg1-2 python3-distutils=3.9.10-1 python3-docutils=0.17.1+dfsg-2 python3-elementpath=2.3.0-1 python3-execnet=1.9.0-1 python3-h5py=3.6.0-2 python3-h5py-serial=3.6.0-2 python3-idna=3.2-2 python3-imagesize=1.3.0-1 python3-importlib-metadata=4.6.4-1 python3-iniconfig=1.1.1-1 python3-isort=5.6.4-1 python3-jinja2=3.0.1-2 python3-lazy-object-proxy=1.7.1-1 python3-lib2to3=3.9.10-1 python3-logilab-common=1.8.2-1 python3-markupsafe=2.0.1-2+b1 python3-mccabe=0.6.1-3 python3-minimal=3.9.8-1 python3-more-itertools=8.10.0-2 python3-mypy-extensions=0.4.3-2 python3-nose=1.3.7-8 python3-nose2=0.9.2-1 python3-numpy=1:1.21.5-1 python3-packaging=21.3-1 python3-pil=9.0.0-1 python3-pkg-resources=59.6.0-1.2 python3-platformdirs=2.4.1-1 python3-pluggy=0.13.0-7.1 python3-py=1.10.0-1 python3-pygments=2.10.0+dfsg-1 python3-pyparsing=2.4.7-1 python3-pysam=0.17.0+ds-2+b1 python3-pytest=6.2.5-1 python3-pytest-cov=3.0.0-1 python3-pytest-forked=1.4.0-1 python3-pytest-runner=2.11.1-1.2 python3-pytest-xdist=2.5.0-1 python3-renderpm=3.6.5-1 python3-reportlab=3.6.5-1 python3-reportlab-accel=3.6.5-1 python3-requests=2.25.1+dfsg-2 python3-roman=3.3-1 python3-setuptools=59.6.0-1.2 python3-six=1.16.0-3 python3-snowballstemmer=2.2.0-1 python3-sphinx=4.3.2-1 python3-toml=0.10.2-1 python3-typing-extensions=3.10.0.2-1 python3-tz=2021.3-1 python3-uritools=3.0.2-1 python3-urllib3=1.26.5-1~exp1 python3-wrapt=1.13.3-1+b1 python3-xmlschema=1.4.2-1 python3-zipp=1.0.0-3 python3.10=3.10.2-1 python3.10-minimal=3.10.2-1 python3.9=3.9.10-1 python3.9-minimal=3.9.10-1 readline-common=8.1.2-1 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sgml-base=1.30 sphinx-common=4.3.2-1 sysvinit-utils=3.01-1 tar=1.34+dfsg-1 tzdata=2021e-1 util-linux=2.37.3-1 xml-core=0.18+nmu1 xz-utils=5.2.5-2 zlib1g=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220203T031730Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220203T031730Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220201T153358Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220126T212728Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d python-pbcore=2.1.2+dfsg-2 && mkdir -p /build/python-pbcore-ZRbNCr && dpkg-source --no-check -x /*.dsc /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg && chown -R builduser:builduser /build/python-pbcore-ZRbNCr" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1643440254" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/python-pbcore-ZRbNCr /tmp/python-pbcore-2.1.2+dfsg-2f7m3v890 bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220126T212728Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.Z_CD2p4ef3 as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.Z_CD2p4ef3 Reading package lists... Building dependency tree... util-linux is already the newest version (2.37.3-1). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 136 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220126T212728Z unstable/main amd64 libfakeroot amd64 1.27-1 [48.5 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220126T212728Z unstable/main amd64 fakeroot amd64 1.27-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 136 kB in 0s (1007 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4692 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.27-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.27-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.27-1_amd64.deb ... Unpacking fakeroot (1.27-1) ... Setting up libfakeroot:amd64 (1.27-1) ... Setting up fakeroot (1.27-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-4+b1) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220203T031730Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220203T031730Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220201T153358Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220126T212728Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.Z_CD2p4ef3 Get:1 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm InRelease [129 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220201T153358Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220126T212728Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm/main Sources [11.8 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm/main amd64 Packages [11.2 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220201T153358Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220201T153358Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220201T153358Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220201T153358Z unstable/main amd64 Packages [12.1 MB] Fetched 35.4 MB in 29s (1220 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.Z_CD2p4ef3 I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d python-pbcore=2.1.2+dfsg-2 && mkdir -p /build/python-pbcore-ZRbNCr && dpkg-source --no-check -x /*.dsc /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg && chown -R builduser:builduser /build/python-pbcore-ZRbNCr"' exec /tmp/mmdebstrap.Z_CD2p4ef3 Reading package lists... NOTICE: 'python-pbcore' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-pbcore.git Please use: git clone https://salsa.debian.org/med-team/python-pbcore.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2980 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm/main python-pbcore 2.1.2+dfsg-2 (dsc) [2618 B] Get:2 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm/main python-pbcore 2.1.2+dfsg-2 (tar) [2918 kB] Get:3 http://snapshot.notset.fr/archive/debian/20220203T031730Z bookworm/main python-pbcore 2.1.2+dfsg-2 (diff) [59.6 kB] Fetched 2980 kB in 2s (1226 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'python-pbcore_2.1.2+dfsg-2.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting python-pbcore in /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg dpkg-source: info: unpacking python-pbcore_2.1.2+dfsg.orig.tar.xz dpkg-source: info: unpacking python-pbcore_2.1.2+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying doc-theme.patch dpkg-source: info: applying enable-build-time-testing.patch dpkg-source: info: applying exclude_test_missing_data.patch dpkg-source: info: applying b24746790c7105212e45dc2f40115d231bd8baae.patch dpkg-source: info: applying seek-curdir-for-xml.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1643440254" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.Z_CD2p4ef3 dpkg-buildpackage: info: source package python-pbcore dpkg-buildpackage: info: source version 2.1.2+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . debian/rules clean debian/rules:53: warning: overriding recipe for target 'override_dh_auto_clean' debian/rules:26: warning: ignoring old recipe for target 'override_dh_auto_clean' dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg' debian/rules:53: warning: overriding recipe for target 'override_dh_auto_clean' debian/rules:26: warning: ignoring old recipe for target 'override_dh_auto_clean' rm -f doc/pbcore.data.datasets.rst doc/pbcore.io.align.rst doc/pbcore.io.dataset.pyxb.rst rm -fr coverage.xml .eggs/README.txt .pytest_cache rm -rf .pybuild rm -rf _tmp doc/_build/ find . -name __pycache__ | xargs -r rm -rf rm -f .coverage nosetests.xml rm -rf pbcore.egg-info make[1]: Leaving directory '/build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-indep debian/rules:53: warning: overriding recipe for target 'override_dh_auto_clean' debian/rules:26: warning: ignoring old recipe for target 'override_dh_auto_clean' dh binary-indep --with python3 --buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_autoreconf -i -O--buildsystem=pybuild dh_auto_configure -i -O--buildsystem=pybuild I: pybuild base:237: python3.10 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( running config I: pybuild base:237: python3.9 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg' debian/rules:53: warning: overriding recipe for target 'override_dh_auto_clean' debian/rules:26: warning: ignoring old recipe for target 'override_dh_auto_clean' dh_auto_build I: pybuild base:237: /usr/bin/python3.10 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( running build running build_py creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore copying pbcore/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore copying pbcore/sequence.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/chemistry copying pbcore/chemistry/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/chemistry copying pbcore/chemistry/chemistry.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/chemistry creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io copying pbcore/io/FastaIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io copying pbcore/io/FastqIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io copying pbcore/io/FofnIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io copying pbcore/io/GffIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io copying pbcore/io/VcfIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io copying pbcore/io/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io copying pbcore/io/_utils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io copying pbcore/io/base.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io copying pbcore/io/opener.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/model copying pbcore/model/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/model copying pbcore/model/baseRegions.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/model creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/util copying pbcore/util/ToolRunner.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/util copying pbcore/util/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/util copying pbcore/util/decorators.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/util copying pbcore/util/statistics.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/util creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align copying pbcore/io/align/BamAlignment.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align copying pbcore/io/align/BamIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align copying pbcore/io/align/BlasrIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align copying pbcore/io/align/PacBioBamIndex.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align copying pbcore/io/align/_AlignmentMixin.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align copying pbcore/io/align/_BamSupport.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align copying pbcore/io/align/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetErrors.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetMembers.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetMetaTypes.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetReader.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetUtils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetWriter.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/run_split.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/utils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetValidator.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset running egg_info creating pbcore.egg-info writing pbcore.egg-info/PKG-INFO writing dependency_links to pbcore.egg-info/dependency_links.txt writing entry points to pbcore.egg-info/entry_points.txt writing requirements to pbcore.egg-info/requires.txt writing top-level names to pbcore.egg-info/top_level.txt writing manifest file 'pbcore.egg-info/SOURCES.txt' reading manifest file 'pbcore.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' warning: no directories found matching 'bin' adding license file 'LICENSE' writing manifest file 'pbcore.egg-info/SOURCES.txt' creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/chemistry/resources copying pbcore/chemistry/resources/mapping.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/chemistry/resources copying pbcore/data/Fluidigm_human_amplicons.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/Fluidigm_human_amplicons.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/Fluidigm_human_amplicons_tiny.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/barcodes-ed65-450.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/barcodes-ed65-450.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/blasr-output.m4 -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/blasr-output.m5 -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/chemistry.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/empty.aligned_subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/empty.aligned_subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/empty.ccs.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/empty.ccs.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/empty2.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/empty2.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/lambdaNEB.fa -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/lambdaNEB.fa.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/variants.gff -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/weird.fa -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/weird.fa.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data copying pbcore/data/datasets/CollectionMetadata.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/alignment.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/barcode.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/ccsaligned.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/ccsread.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/contig.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/empty_lambda.aligned.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/empty_lambda.aligned.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/empty_lambda.aligned.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/fofn.fofn -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/lambda.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/lambda.referenceset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/m150430_142051_Mon_p1_b25.sts.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/m150616_053259_ethan_c100710482550000001823136404221563_s1_p0.sts.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.alignmentset.chunk0contigs.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.alignmentset.chunk1contigs.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.pbalign.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.pbalign.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.pbalign.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.reference.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.reference.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.referenceset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.subreadset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.pbalign.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.pbalign.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.pbalign.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.subreadset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/reference.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/subread.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/subreadSetWithStats.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets I: pybuild base:237: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( running build running build_py creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore copying pbcore/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore copying pbcore/sequence.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/chemistry copying pbcore/chemistry/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/chemistry copying pbcore/chemistry/chemistry.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/chemistry creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io copying pbcore/io/FastaIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io copying pbcore/io/FastqIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io copying pbcore/io/FofnIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io copying pbcore/io/GffIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io copying pbcore/io/VcfIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io copying pbcore/io/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io copying pbcore/io/_utils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io copying pbcore/io/base.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io copying pbcore/io/opener.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/model copying pbcore/model/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/model copying pbcore/model/baseRegions.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/model creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util copying pbcore/util/ToolRunner.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util copying pbcore/util/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util copying pbcore/util/decorators.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util copying pbcore/util/statistics.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align copying pbcore/io/align/BamAlignment.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align copying pbcore/io/align/BamIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align copying pbcore/io/align/BlasrIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align copying pbcore/io/align/PacBioBamIndex.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align copying pbcore/io/align/_AlignmentMixin.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align copying pbcore/io/align/_BamSupport.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align copying pbcore/io/align/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetErrors.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetMembers.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetMetaTypes.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetReader.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetUtils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetWriter.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/run_split.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/utils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetValidator.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset running egg_info writing pbcore.egg-info/PKG-INFO writing dependency_links to pbcore.egg-info/dependency_links.txt writing entry points to pbcore.egg-info/entry_points.txt writing requirements to pbcore.egg-info/requires.txt writing top-level names to pbcore.egg-info/top_level.txt reading manifest file 'pbcore.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' warning: no directories found matching 'bin' adding license file 'LICENSE' writing manifest file 'pbcore.egg-info/SOURCES.txt' creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/chemistry/resources copying pbcore/chemistry/resources/mapping.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/chemistry/resources copying pbcore/data/Fluidigm_human_amplicons.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/Fluidigm_human_amplicons.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/Fluidigm_human_amplicons_tiny.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/barcodes-ed65-450.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/barcodes-ed65-450.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/blasr-output.m4 -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/blasr-output.m5 -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/chemistry.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/empty.aligned_subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/empty.aligned_subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/empty.ccs.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/empty.ccs.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/empty2.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/empty2.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/lambdaNEB.fa -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/lambdaNEB.fa.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/variants.gff -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/weird.fa -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/weird.fa.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data copying pbcore/data/datasets/CollectionMetadata.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/alignment.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/barcode.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/ccsaligned.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/ccsread.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/contig.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/empty_lambda.aligned.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/empty_lambda.aligned.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/empty_lambda.aligned.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/fofn.fofn -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/lambda.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/lambda.referenceset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/m150430_142051_Mon_p1_b25.sts.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/m150616_053259_ethan_c100710482550000001823136404221563_s1_p0.sts.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.alignmentset.chunk0contigs.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.alignmentset.chunk1contigs.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.pbalign.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.pbalign.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.pbalign.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.reference.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.reference.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.referenceset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim0.subreadset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.pbalign.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.pbalign.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.pbalign.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/pbalchemysim1.subreadset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/reference.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/subread.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets copying pbcore/data/datasets/subreadSetWithStats.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets PYTHONPATH=/build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build /usr/bin/make doc make[2]: Entering directory '/build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg' sphinx-apidoc -o doc/ pbcore/ && cd doc/ && make html File doc/pbcore.rst already exists, skipping. File doc/pbcore.chemistry.rst already exists, skipping. File doc/pbcore.data.rst already exists, skipping. Creating file doc/pbcore.data.datasets.rst. File doc/pbcore.io.rst already exists, skipping. Creating file doc/pbcore.io.align.rst. File doc/pbcore.io.dataset.rst already exists, skipping. File doc/pbcore.model.rst already exists, skipping. File doc/pbcore.util.rst already exists, skipping. File doc/modules.rst already exists, skipping. make[3]: Entering directory '/build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/doc' sphinx-apidoc -o . -d 4 ../pbcore/ File ./pbcore.rst already exists, skipping. File ./pbcore.chemistry.rst already exists, skipping. File ./pbcore.data.rst already exists, skipping. File ./pbcore.data.datasets.rst already exists, skipping. File ./pbcore.io.rst already exists, skipping. File ./pbcore.io.align.rst already exists, skipping. File ./pbcore.io.dataset.rst already exists, skipping. File ./pbcore.model.rst already exists, skipping. File ./pbcore.util.rst already exists, skipping. File ./modules.rst already exists, skipping. sphinx-build -b html -d _build/doctrees . _build/html Running Sphinx v4.3.2 making output directory... done loading intersphinx inventory from http://docs.python.org/objects.inv... intersphinx inventory has moved: http://docs.python.org/objects.inv -> https://docs.python.org/3/objects.inv building [mo]: targets for 0 po files that are out of date building [html]: targets for 11 source files that are out of date updating environment: [new config] 11 added, 0 changed, 0 removed reading sources... [ 9%] index reading sources... [ 18%] modules reading sources... [ 27%] pbcore reading sources... [ 36%] pbcore.chemistry reading sources... [ 45%] pbcore.data reading sources... [ 54%] pbcore.data.datasets reading sources... [ 63%] pbcore.io reading sources... [ 72%] pbcore.io.align reading sources... [ 81%] pbcore.io.dataset reading sources... [ 90%] pbcore.model reading sources... [100%] pbcore.util /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/doc/pbcore.rst:7: WARNING: toctree contains reference to nonexisting document 'pbcore.deprecated' /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/DataSetMembers.py:docstring of pbcore.io.dataset.DataSetMembers:47: WARNING: Unexpected indentation. WARNING: autodoc: failed to import module 'Process' from module 'pbcore.util'; the following exception was raised: No module named 'pbcore.util.Process' looking for now-outdated files... none found pickling environment... done checking consistency... /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/doc/modules.rst: WARNING: document isn't included in any toctree /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/doc/pbcore.data.datasets.rst: WARNING: document isn't included in any toctree /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/doc/pbcore.io.align.rst: WARNING: document isn't included in any toctree /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/doc/pbcore.io.dataset.rst: WARNING: document isn't included in any toctree done preparing documents... done writing output... [ 9%] index writing output... [ 18%] modules writing output... [ 27%] pbcore writing output... [ 36%] pbcore.chemistry writing output... [ 45%] pbcore.data writing output... [ 54%] pbcore.data.datasets writing output... [ 63%] pbcore.io writing output... [ 72%] pbcore.io.align writing output... [ 81%] pbcore.io.dataset writing output... [ 90%] pbcore.model writing output... [100%] pbcore.util WARNING: dot command 'dot' cannot be run (needed for graphviz output), check the graphviz_dot setting generating indices... genindex py-modindex done writing additional pages... search done copying static files... done copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 8 warnings. The HTML pages are in _build/html. Build finished. The HTML pages are in _build/html. make[3]: Leaving directory '/build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/doc' make[2]: Leaving directory '/build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg' make[1]: Leaving directory '/build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -i -O--buildsystem=pybuild dh_prep -i -O--buildsystem=pybuild dh_auto_install -i -O--buildsystem=pybuild I: pybuild base:237: /usr/bin/python3.10 setup.py install --root /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore /usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running egg_info writing pbcore.egg-info/PKG-INFO writing dependency_links to pbcore.egg-info/dependency_links.txt writing entry points to pbcore.egg-info/entry_points.txt writing requirements to pbcore.egg-info/requires.txt writing top-level names to pbcore.egg-info/top_level.txt reading manifest file 'pbcore.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' warning: no directories found matching 'bin' adding license file 'LICENSE' writing manifest file 'pbcore.egg-info/SOURCES.txt' running install_lib creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10 creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/sequence.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/chemistry copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/chemistry/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/chemistry copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/chemistry/chemistry.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/chemistry creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/chemistry/resources copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/chemistry/resources/mapping.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/chemistry/resources creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/CollectionMetadata.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/alignment.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/barcode.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/ccsaligned.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/ccsread.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/contig.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/empty_lambda.aligned.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/empty_lambda.aligned.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/empty_lambda.aligned.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/fofn.fofn -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/lambda.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/lambda.referenceset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/m150430_142051_Mon_p1_b25.sts.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/m150616_053259_ethan_c100710482550000001823136404221563_s1_p0.sts.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.alignmentset.chunk0contigs.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.alignmentset.chunk1contigs.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.pbalign.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.pbalign.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.pbalign.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.reference.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.reference.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.referenceset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreadset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim1.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreadset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/reference.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/subread.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/datasets/subreadSetWithStats.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/Fluidigm_human_amplicons.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/Fluidigm_human_amplicons.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/Fluidigm_human_amplicons_tiny.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/barcodes-ed65-450.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/barcodes-ed65-450.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/blasr-output.m4 -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/blasr-output.m5 -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/chemistry.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/empty.aligned_subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/empty.aligned_subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/empty.ccs.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/empty.ccs.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/empty2.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/empty2.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/lambdaNEB.fa -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/lambdaNEB.fa.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/variants.gff -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/weird.fa -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/data/weird.fa.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/FastaIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/FastqIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/FofnIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/GffIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/VcfIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/_utils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/base.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/opener.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align/BamAlignment.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align/BamIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align/BlasrIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align/PacBioBamIndex.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align/_AlignmentMixin.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align/_BamSupport.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/align/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset/DataSetErrors.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset/DataSetIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset/DataSetMembers.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset/DataSetMetaTypes.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset/DataSetReader.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset/DataSetUtils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset/DataSetWriter.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset/run_split.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset/utils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/io/dataset/DataSetValidator.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/model copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/model/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/model copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/model/baseRegions.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/model creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/util copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/util/ToolRunner.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/util copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/util/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/util copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/util/decorators.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/util copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.10_pbcore/build/pbcore/util/statistics.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/util byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/__init__.py to __init__.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/sequence.py to sequence.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/chemistry/__init__.py to __init__.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/chemistry/chemistry.py to chemistry.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/__init__.py to __init__.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/data/datasets/__init__.py to __init__.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/FastaIO.py to FastaIO.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/FastqIO.py to FastqIO.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/FofnIO.py to FofnIO.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/GffIO.py to GffIO.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/VcfIO.py to VcfIO.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/__init__.py to __init__.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/_utils.py to _utils.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/base.py to base.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/opener.py to opener.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align/BamAlignment.py to BamAlignment.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align/BamIO.py to BamIO.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align/BlasrIO.py to BlasrIO.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align/PacBioBamIndex.py to PacBioBamIndex.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align/_AlignmentMixin.py to _AlignmentMixin.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align/_BamSupport.py to _BamSupport.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/align/__init__.py to __init__.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset/DataSetErrors.py to DataSetErrors.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset/DataSetIO.py to DataSetIO.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset/DataSetMembers.py to DataSetMembers.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset/DataSetMetaTypes.py to DataSetMetaTypes.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset/DataSetReader.py to DataSetReader.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset/DataSetUtils.py to DataSetUtils.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset/DataSetWriter.py to DataSetWriter.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset/__init__.py to __init__.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset/run_split.py to run_split.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset/utils.py to utils.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/io/dataset/DataSetValidator.py to DataSetValidator.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/model/__init__.py to __init__.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/model/baseRegions.py to baseRegions.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/util/ToolRunner.py to ToolRunner.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/util/__init__.py to __init__.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/util/decorators.py to decorators.cpython-310.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore/util/statistics.py to statistics.cpython-310.pyc running install_egg_info Copying pbcore.egg-info to /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.10/dist-packages/pbcore-2.2.0.egg-info Skipping SOURCES.txt running install_scripts Installing .open script to /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/bin I: pybuild pybuild:324: chmod -x /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore//usr/lib/python3.10/dist-packages/pbcore/data/datasets/*.xml I: pybuild base:237: /usr/bin/python3 setup.py install --root /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore /usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running egg_info writing pbcore.egg-info/PKG-INFO writing dependency_links to pbcore.egg-info/dependency_links.txt writing entry points to pbcore.egg-info/entry_points.txt writing requirements to pbcore.egg-info/requires.txt writing top-level names to pbcore.egg-info/top_level.txt reading manifest file 'pbcore.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' warning: no directories found matching 'bin' adding license file 'LICENSE' writing manifest file 'pbcore.egg-info/SOURCES.txt' running install_lib creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9 creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/sequence.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/chemistry copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/chemistry/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/chemistry copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/chemistry/chemistry.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/chemistry creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/chemistry/resources copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/chemistry/resources/mapping.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/chemistry/resources creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/chemistry/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/chemistry/__pycache__/__init__.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/chemistry/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/chemistry/__pycache__/chemistry.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/chemistry/__pycache__ creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/CollectionMetadata.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/alignment.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/barcode.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/ccsaligned.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/ccsread.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/contig.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/empty_lambda.aligned.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/empty_lambda.aligned.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/empty_lambda.aligned.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/fofn.fofn -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/lambda.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/lambda.referenceset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/m150430_142051_Mon_p1_b25.sts.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/m150616_053259_ethan_c100710482550000001823136404221563_s1_p0.sts.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.alignmentset.chunk0contigs.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.alignmentset.chunk1contigs.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.pbalign.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.pbalign.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.pbalign.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.reference.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.reference.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.referenceset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreadset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim1.alignmentset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreadset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/reference.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/subread.dataset.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/subreadSetWithStats.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/datasets/__pycache__/__init__.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/Fluidigm_human_amplicons.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/Fluidigm_human_amplicons.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/Fluidigm_human_amplicons_tiny.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/barcodes-ed65-450.fasta -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/barcodes-ed65-450.fasta.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/blasr-output.m4 -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/blasr-output.m5 -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/chemistry.xml -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/empty.aligned_subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/empty.aligned_subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/empty.ccs.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/empty.ccs.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/empty2.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/empty2.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/lambdaNEB.fa -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/lambdaNEB.fa.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam.bai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam.pbi -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/variants.gff -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/weird.fa -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/weird.fa.fai -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/data/__pycache__/__init__.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/__pycache__ creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/FastaIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/FastqIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/FofnIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/GffIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/VcfIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/_utils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/base.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/opener.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/BamAlignment.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/BamIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/BlasrIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/PacBioBamIndex.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/_AlignmentMixin.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/_BamSupport.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/__pycache__/__init__.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/__pycache__/BamIO.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/__pycache__/PacBioBamIndex.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/__pycache__/_BamSupport.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/__pycache__/BamAlignment.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/__pycache__/_AlignmentMixin.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/align/__pycache__/BlasrIO.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/__pycache__ creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/DataSetErrors.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/DataSetIO.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/DataSetMembers.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/DataSetMetaTypes.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/DataSetReader.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/DataSetUtils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/DataSetWriter.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/run_split.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/utils.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/DataSetValidator.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/__pycache__/__init__.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/__pycache__/DataSetIO.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/__pycache__/DataSetReader.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/__pycache__/DataSetMembers.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/__pycache__/utils.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/__pycache__/DataSetUtils.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/__pycache__/DataSetWriter.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/__pycache__/DataSetErrors.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/__pycache__/DataSetValidator.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/dataset/__pycache__/DataSetMetaTypes.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__pycache__ creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/__pycache__/__init__.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/__pycache__/FastaIO.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/__pycache__/base.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/__pycache__/_utils.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/__pycache__/FastqIO.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/__pycache__/FofnIO.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/__pycache__/GffIO.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/__pycache__/VcfIO.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/io/__pycache__/opener.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/__pycache__ creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/model copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/model/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/model copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/model/baseRegions.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/model creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util/ToolRunner.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util/__init__.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util/decorators.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util/statistics.py -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util/__pycache__/__init__.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util/__pycache__/decorators.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/util/__pycache__/ToolRunner.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util/__pycache__ creating /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/__pycache__/__init__.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/__pycache__ copying /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.9_pbcore/build/pbcore/__pycache__/sequence.cpython-39.pyc -> /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/__pycache__ byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/sequence.py to sequence.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/chemistry/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/chemistry/chemistry.py to chemistry.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/data/datasets/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/FastaIO.py to FastaIO.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/FastqIO.py to FastqIO.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/FofnIO.py to FofnIO.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/GffIO.py to GffIO.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/VcfIO.py to VcfIO.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/_utils.py to _utils.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/base.py to base.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/opener.py to opener.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/BamAlignment.py to BamAlignment.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/BamIO.py to BamIO.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/BlasrIO.py to BlasrIO.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/PacBioBamIndex.py to PacBioBamIndex.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/_AlignmentMixin.py to _AlignmentMixin.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/_BamSupport.py to _BamSupport.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/align/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/DataSetErrors.py to DataSetErrors.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/DataSetIO.py to DataSetIO.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/DataSetMembers.py to DataSetMembers.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/DataSetMetaTypes.py to DataSetMetaTypes.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/DataSetReader.py to DataSetReader.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/DataSetUtils.py to DataSetUtils.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/DataSetWriter.py to DataSetWriter.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/run_split.py to run_split.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/utils.py to utils.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/io/dataset/DataSetValidator.py to DataSetValidator.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/model/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/model/baseRegions.py to baseRegions.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util/ToolRunner.py to ToolRunner.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util/decorators.py to decorators.cpython-39.pyc byte-compiling /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore/util/statistics.py to statistics.cpython-39.pyc running install_egg_info Copying pbcore.egg-info to /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.9/dist-packages/pbcore-2.2.0.egg-info Skipping SOURCES.txt running install_scripts Installing .open script to /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/bin I: pybuild pybuild:324: chmod -x /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg/debian/python3-pbcore//usr/lib/python3.9/dist-packages/pbcore/data/datasets/*.xml debian/rules override_dh_install make[1]: Entering directory '/build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg' debian/rules:53: warning: overriding recipe for target 'override_dh_auto_clean' debian/rules:26: warning: ignoring old recipe for target 'override_dh_auto_clean' dh_install dh_install: warning: Cannot find (any matches for) "_tmp/usr/share/doc/python3-pbcore/tests" (tried in ., debian/tmp) dh_install: warning: python-pbcore-doc missing files: _tmp/usr/share/doc/python3-pbcore/tests dh_install: error: missing files, aborting make[1]: *** [debian/rules:19: override_dh_install] Error 25 make[1]: Leaving directory '/build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg' make: *** [debian/rules:12: binary-indep] Error 2 dpkg-buildpackage: error: debian/rules binary-indep subprocess returned exit status 2 E: run_chroot failed: E: command failed: chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/python-pbcore-ZRbNCr/python-pbcore-2.1.2+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1643440254" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all" W: listening on child socket failed: I: removing tempdir /tmp/mmdebstrap.Z_CD2p4ef3... E: mmdebstrap failed to run mmdebstrap failed