Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/p/python-pairix/python-pairix_0.3.7-3_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/python-pairix-0.3.7-3yh21ad52/python-pairix_0.3.7-3_all.buildinfo Get source package info: python-pairix=0.3.7-3 Source URL: http://snapshot.notset.fr/mr/package/python-pairix/0.3.7-3/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11.1 automake=1:1.16.2-4 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.48 bash=5.1~rc2-1 binutils=2.35.1-2 binutils-common=2.35.1-2 binutils-x86-64-linux-gnu=2.35.1-2 bsdextrautils=2.36-3+b2 bsdutils=1:2.36-3+b2 build-essential=12.8 bzip2=1.0.8-4 coreutils=8.32-4+b1 cpp=4:10.2.0-1 cpp-10=10.2.0-16 dash=0.5.10.2-7 debconf=1.5.74 debhelper=13.2.1 debianutils=4.11.2 dh-autoreconf=19 dh-python=4.20201102 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13-5 file=1:5.38-5 findutils=4.7.0+git20201010-2 g++=4:10.2.0-1 g++-10=10.2.0-16 gcc=4:10.2.0-1 gcc-10=10.2.0-16 gcc-10-base=10.2.0-16 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 grep=3.4-1 groff-base=1.22.4-5 gzip=1.10-2 hostname=3.23 init-system-helpers=1.58 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libasan6=10.2.0-16 libatomic1=10.2.0-16 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3.1 libaudit1=1:2.8.5-3.1 libbinutils=2.35.1-2 libblkid1=2.36-3+b2 libbz2-1.0=1.0.8-4 libc-bin=2.31-4 libc-dev-bin=2.31-4 libc6=2.31-4 libc6-dev=2.31-4 libcap-ng0=0.7.9-2.2 libcc1-0=10.2.0-16 libcom-err2=1.45.6-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.1-2 libctf0=2.35.1-2 libdb5.3=5.3.28+dfsg1-0.6 libdebconfclient0=0.255 libdebhelper-perl=13.2.1 libdpkg-perl=1.20.5 libelf1=0.182-1 libexpat1=2.2.10-1 libexpat1-dev=2.2.10-1 libffi7=3.3-4 libfile-stripnondeterminism-perl=1.9.0-1 libgcc-10-dev=10.2.0-16 libgcc-s1=10.2.0-16 libgcrypt20=1.8.7-2 libgdbm-compat4=1.18.1-5.1 libgdbm6=1.18.1-5.1 libglib2.0-0=2.66.2-1 libgmp10=2:6.2.0+dfsg-6 libgomp1=10.2.0-16 libgpg-error0=1.38-2 libgssapi-krb5-2=1.17-10 libicu67=67.1-4 libisl22=0.22.1-1 libitm1=10.2.0-16 libk5crypto3=1.17-10 libkeyutils1=1.6.1-2 libkrb5-3=1.17-10 libkrb5support0=1.17-10 liblsan0=10.2.0-16 liblz4-1=1.9.2-2 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.38-5 libmagic1=1:5.38-5 libmount1=2.36-3+b2 libmpc3=1.2.0-1 libmpfr6=4.1.0-3 libncursesw6=6.2+20200918-1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libnss-nis=3.1-4 libnss-nisplus=1.3-4 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpcre2-8-0=10.34-7 libpcre3=2:8.39-13 libperl5.30=5.30.3-4 libpipeline1=1.5.3-1 libpython3-all-dev=3.8.6-1 libpython3-dev=3.8.6-1 libpython3-stdlib=3.8.6-1 libpython3.8=3.8.6-1 libpython3.8-dev=3.8.6-1 libpython3.8-minimal=3.8.6-1 libpython3.8-stdlib=3.8.6-1 libpython3.9=3.9.0-5 libpython3.9-dev=3.9.0-5 libpython3.9-minimal=3.9.0-5 libpython3.9-stdlib=3.9.0-5 libquadmath0=10.2.0-16 libreadline8=8.0-4 libseccomp2=2.4.4-1+b1 libselinux1=3.1-2+b1 libsigsegv2=2.12-2 libsmartcols1=2.36-3+b2 libsqlite3-0=3.33.0-1 libssl1.1=1.1.1h-1 libstdc++-10-dev=10.2.0-16 libstdc++6=10.2.0-16 libsub-override-perl=0.09-2 libsystemd0=246.6-2 libtinfo6=6.2+20200918-1 libtirpc-common=1.2.6-3 libtirpc-dev=1.2.6-3 libtirpc3=1.2.6-3 libtool=2.4.6-14 libtsan0=10.2.0-16 libubsan1=10.2.0-16 libuchardet0=0.0.7-1 libudev1=246.6-2 libunistring2=0.9.10-4 libuuid1=2.36-3+b2 libxml2=2.9.10+dfsg-6.2 libzstd1=1.4.5+dfsg-4 linux-libc-dev=5.9.1-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 mime-support=3.64 ncurses-base=6.2+20200918-1 ncurses-bin=6.2+20200918-1 patch=2.7.6-6 perl=5.30.3-4 perl-base=5.30.3-4 perl-modules-5.30=5.30.3-4 po-debconf=1.0.21 python3=3.8.6-1 python3-all=3.8.6-1 python3-all-dev=3.8.6-1 python3-atomicwrites=1.4.0-1 python3-attr=20.1.0-1 python3-dev=3.8.6-1 python3-distutils=3.8.6-1 python3-importlib-metadata=1.6.0-2 python3-lib2to3=3.8.6-1 python3-minimal=3.8.6-1 python3-more-itertools=4.2.0-3 python3-packaging=20.4-1 python3-pkg-resources=50.3.0-1 python3-pluggy=0.13.0-5 python3-py=1.9.0-1 python3-pyparsing=2.4.7-1 python3-pytest=4.6.11-1 python3-setuptools=50.3.0-1 python3-six=1.15.0-1 python3-wcwidth=0.1.9+dfsg1-2 python3-zipp=1.0.0-3 python3.8=3.8.6-1 python3.8-dev=3.8.6-1 python3.8-minimal=3.8.6-1 python3.9=3.9.0-5 python3.9-dev=3.9.0-5 python3.9-minimal=3.9.0-5 readline-common=8.0-4 sed=4.7-1 sensible-utils=0.0.12+nmu1 sysvinit-utils=2.96-5 tar=1.30+dfsg-7 util-linux=2.36-3+b2 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201108T155128Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d python-pairix=0.3.7-3 && mkdir -p /build/python-pairix-reh8mQ && dpkg-source --no-check -x /*.dsc /build/python-pairix-reh8mQ/python-pairix-0.3.7 && chown -R builduser:builduser /build/python-pairix-reh8mQ" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/python-pairix-reh8mQ/python-pairix-0.3.7 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1604931983" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/python-pairix-reh8mQ /tmp/python-pairix-0.3.7-3yh21ad52 bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20201108T155128Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.dTuxZ0Wq4U as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.dTuxZ0Wq4U Reading package lists... Building dependency tree... util-linux is already the newest version (2.36-3+b2). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20201108T155128Z unstable/main amd64 libfakeroot amd64 1.25.3-1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20201108T155128Z unstable/main amd64 fakeroot amd64 1.25.3-1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (1095 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4664 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1_amd64.deb ... Unpacking fakeroot (1.25.3-1) ... Setting up libfakeroot:amd64 (1.25.3-1) ... Setting up fakeroot (1.25.3-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-4) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201108T155128Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.dTuxZ0Wq4U Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20201108T155128Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 21s (1074 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.dTuxZ0Wq4U I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d python-pairix=0.3.7-3 && mkdir -p /build/python-pairix-reh8mQ && dpkg-source --no-check -x /*.dsc /build/python-pairix-reh8mQ/python-pairix-0.3.7 && chown -R builduser:builduser /build/python-pairix-reh8mQ"' exec /tmp/mmdebstrap.dTuxZ0Wq4U Reading package lists... NOTICE: 'python-pairix' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-pairix.git Please use: git clone https://salsa.debian.org/med-team/python-pairix.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 175 MB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main python-pairix 0.3.7-3 (dsc) [2228 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main python-pairix 0.3.7-3 (tar) [175 MB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main python-pairix 0.3.7-3 (diff) [3292 B] Fetched 175 MB in 2min 25s (1210 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'python-pairix_0.3.7-3.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting python-pairix in /build/python-pairix-reh8mQ/python-pairix-0.3.7 dpkg-source: info: unpacking python-pairix_0.3.7.orig.tar.gz dpkg-source: info: unpacking python-pairix_0.3.7-3.debian.tar.xz I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/python-pairix-reh8mQ/python-pairix-0.3.7 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1604931983" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.dTuxZ0Wq4U dpkg-buildpackage: info: source package python-pairix dpkg-buildpackage: info: source version 0.3.7-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it I: pybuild base:232: python3.8 setup.py clean running clean removing '/build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.8' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-indep dh binary-indep --with python3 --buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_autoreconf -i -O--buildsystem=pybuild dh_auto_configure -i -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py config running config I: pybuild base:232: python3.8 setup.py config running config dh_auto_build -i -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3.9 setup.py build running build running build_ext building 'pypairix' extension creating build creating build/temp.linux-x86_64-3.9 creating build/temp.linux-x86_64-3.9/src x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.9 -c src/bgzf.c -o build/temp.linux-x86_64-3.9/src/bgzf.o src/bgzf.c: In function ‘bgzf_block_length’: src/bgzf.c:331:27: warning: unused variable ‘remaining’ [-Wunused-variable] 331 | int count, block_length, remaining; | ^~~~~~~~~ src/bgzf.c:330:40: warning: unused variable ‘compressed_block’ [-Wunused-variable] 330 | uint8_t header[BLOCK_HEADER_LENGTH], *compressed_block; | ^~~~~~~~~~~~~~~~ src/bgzf.c: In function ‘bgzf_flush’: src/bgzf.c:419:61: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 419 | if (fwrite(fp->compressed_block, 1, block_length, fp->fp) != block_length) { | ^~ src/bgzf.c: In function ‘bgzf_close’: src/bgzf.c:456:11: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 456 | int ret, count, block_length; | ^~~~~ x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.9 -c src/bgzip.c -o build/temp.linux-x86_64-3.9/src/bgzip.o x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.9 -c src/index.c -o build/temp.linux-x86_64-3.9/src/index.o src/index.c: In function ‘merge_chunks’: src/index.c:354:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 354 | for (l = 1; l < p->n; ++l) { | ^ src/index.c: In function ‘ti_index_core’: src/index.c:393:35: warning: overflow in conversion from ‘uint32_t’ {aka ‘unsigned int’} to ‘int32_t’ {aka ‘int’} changes value from ‘last_bin = 4294967295’ to ‘-1’ [-Woverflow] 393 | save_bin = save_tid = last_tid = last_bin = 0xffffffffu; | ^~~~~~~~ src/index.c:399:14: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare] 399 | if (lineno <= idx->conf.line_skip || str->s[0] == idx->conf.meta_char) { | ^~ src/index.c:423:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 423 | if (intv.bin != last_bin) { // then possibly write the binning index | ^~ src/index.c:431:21: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long int’} and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 431 | if (bgzf_tell(fp) <= last_off) { | ^~ src/index.c: In function ‘ti_index_save’: src/index.c:510:17: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘khint_t’ {aka ‘unsigned int’} [-Wsign-compare] 510 | for (i = 0; i < kh_size(idx->tname); ++i) | ^ src/index.c:514:17: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘khint_t’ {aka ‘unsigned int’} [-Wsign-compare] 514 | for (i = 0; i < kh_size(idx->tname); ++i) | ^ src/index.c:534:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 534 | for (x = 0; (int)x < p->n; ++x) { | ^ src/index.c:539:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 539 | for (x = 0; (int)x < p->n; ++x) { | ^ src/index.c: In function ‘ti_index_load_core’: src/index.c:659:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 659 | for (x = 0; x < p->n; ++x) { | ^ src/index.c: In function ‘ti_parse_region2d’: src/index.c:864:69: warning: passing argument 1 of ‘ti_get_region_split_character’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 864 | char region_split_character = ti_get_region_split_character(idx); | ^~~ In file included from src/index.c:11: src/pairix.h:218:56: note: expected ‘ti_index_t *’ {aka ‘struct __ti_index_t *’} but argument is of type ‘const ti_index_t *’ {aka ‘const struct __ti_index_t *’} 218 | char ti_get_region_split_character(ti_index_t *idx); | ~~~~~~~~~~~~^~~ src/index.c:878:30: warning: passing argument 1 of ‘ti_get_sc2’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 878 | int dim = ti_get_sc2(idx)+1==0?1:2; | ^~~ In file included from src/index.c:11: src/pairix.h:209:36: note: expected ‘ti_index_t *’ {aka ‘struct __ti_index_t *’} but argument is of type ‘const ti_index_t *’ {aka ‘const struct __ti_index_t *’} 209 | int ti_get_sc2(ti_index_t *idx); | ~~~~~~~~~~~~^~~ src/index.c: In function ‘reg2bins’: src/index.c:974:49: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 974 | for (k = 1 + (beg>>TAD_LIDX_SHIFT_PL12); k <= 1 + (end>>TAD_LIDX_SHIFT_PL12); ++k) list[i++] = k; | ^~ src/index.c:975:48: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 975 | for (k = 9 + (beg>>TAD_LIDX_SHIFT_PL9); k <= 9 + (end>>TAD_LIDX_SHIFT_PL9); ++k) list[i++] = k; | ^~ src/index.c:976:48: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 976 | for (k = 73 + (beg>>TAD_LIDX_SHIFT_PL6); k <= 73 + (end>>TAD_LIDX_SHIFT_PL6); ++k) list[i++] = k; | ^~ src/index.c:977:48: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 977 | for (k = 585 + (beg>>TAD_LIDX_SHIFT_PL3); k <= 585 + (end>>TAD_LIDX_SHIFT_PL3); ++k) list[i++] = k; | ^~ src/index.c:978:44: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 978 | for (k = 4681 + (beg>>TAD_LIDX_SHIFT); k <= 4681 + (end>>TAD_LIDX_SHIFT); ++k) list[i++] = k; | ^~ src/index.c: In function ‘ti_iter_query’: src/index.c:1038:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 1038 | for (j = 0; j < p->n; ++j) | ^ src/index.c: In function ‘ti_querys_2d_general’: src/index.c:1219:31: warning: initialization of ‘char **’ from incompatible pointer type ‘const char **’ [-Wincompatible-pointer-types] 1219 | char **chrpairlist = ti_seqname(t->idx, &n_seqpair_list); | ^~~~~~~~~~ src/index.c:1236:59: warning: passing argument 2 of ‘ti_querys_2d_multi’ from incompatible pointer type [-Wincompatible-pointer-types] 1236 | sequential_iter_t *siter = ti_querys_2d_multi(t, regions, n_sub_list); | ^~~~~~~ | | | char ** In file included from src/index.c:11: src/pairix.h:131:73: note: expected ‘const char **’ but argument is of type ‘char **’ 131 | sequential_iter_t *ti_querys_2d_multi(pairix_t *t, const char **regs, int nRegs); | ~~~~~~~~~~~~~^~~~ src/index.c:1242:30: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1242 | *sp=0; char *chr1 = reg; | ^~~ src/index.c:1246:31: warning: initialization of ‘char **’ from incompatible pointer type ‘const char **’ [-Wincompatible-pointer-types] 1246 | char **chrpairlist = ti_seqname(t->idx, &n_seqpair_list); | ^~~~~~~~~~ src/index.c:1263:59: warning: passing argument 2 of ‘ti_querys_2d_multi’ from incompatible pointer type [-Wincompatible-pointer-types] 1263 | sequential_iter_t *siter = ti_querys_2d_multi(t, regions, n_sub_list); | ^~~~~~~ | | | char ** In file included from src/index.c:11: src/pairix.h:131:73: note: expected ‘const char **’ but argument is of type ‘char **’ 131 | sequential_iter_t *ti_querys_2d_multi(pairix_t *t, const char **regs, int nRegs); | ~~~~~~~~~~~~~^~~~ src/index.c: In function ‘ti_query_2d_tid’: src/index.c:1417:24: warning: returning ‘ti_iter_t’ {aka ‘struct __ti_iter_t *’} from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 1417 | if (name == 0) return ti_iter_first(); | ^~~~~~~~~~~~~~~ src/index.c: In function ‘create_merged_iter’: src/index.c:1469:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 1469 | if( miter->iu = calloc(n,sizeof(iter_unit*))) { | ^~~~~ src/index.c: In function ‘merged_ti_read’: src/index.c:1537:19: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1537 | miu[i]->s = ti_iter_read(miu[i]->t->fp, miu[i]->iter, miu[i]->len, seqonly); | ^ src/index.c:1543:17: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1543 | miu[0]->s = ti_iter_read(miu[0]->t->fp, miu[0]->iter, miu[0]->len, seqonly); // get next entry for the flushed iter | ^ src/index.c: In function ‘sequential_ti_read’: src/index.c:1573:15: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1573 | char *s = ti_iter_read(siter->t->fp,siter->iter[siter->curr], len, 0); | ^~~~~~~~~~~~ src/index.c:1576:9: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1576 | s = ti_iter_read(siter->t->fp,siter->iter[siter->curr], len, 0); | ^ src/index.c: In function ‘get_unique_merged_seqname’: src/index.c:1643:22: warning: assignment to ‘char **’ from incompatible pointer type ‘const char **’ [-Wincompatible-pointer-types] 1643 | seqnames = ti_seqname(tbs[i]->idx,&len); | ^ src/index.c: In function ‘flip_region’: src/index.c:1744:19: warning: variable ‘split_pos’ set but not used [-Wunused-but-set-variable] 1744 | int l, i, l2, split_pos; | ^~~~~~~~~ src/index.c: In function ‘querys_2D_wrapper’: src/index.c:1911:34: warning: passing argument 1 of ‘flip_region’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1911 | char *reg2 = flip_region(reg, get_region_split_character(tb)); | ^~~ src/index.c:1743:27: note: expected ‘char *’ but argument is of type ‘const char *’ 1743 | char *flip_region ( char* s, char region_split_character) { | ~~~~~~^ src/index.c: In function ‘check_triangle’: src/index.c:1971:23: warning: initialization of ‘char **’ from incompatible pointer type ‘const char **’ [-Wincompatible-pointer-types] 1971 | char **seqnames = ti_seqname(idx,&len); | ^~~~~~~~~~ src/index.c:1977:64: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1977 | if(ti_get_tid(idx, reg2)!=-1) { free(seqnames); free(reg2); return(0); } // not a triangle | ^~~~ In file included from src/khash.h:94, from src/index.c:4: /usr/include/stdlib.h:565:25: note: expected ‘void *’ but argument is of type ‘const char *’ 565 | extern void free (void *__ptr) __THROW; | ~~~~~~^~~~~ src/index.c:1978:14: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1978 | free(reg2); | ^~~~ In file included from src/khash.h:94, from src/index.c:4: /usr/include/stdlib.h:565:25: note: expected ‘void *’ but argument is of type ‘const char *’ 565 | extern void free (void *__ptr) __THROW; | ~~~~~~^~~~~ x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.9 -c src/knetfile.c -o build/temp.linux-x86_64-3.9/src/knetfile.o x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.9 -c src/kstring.c -o build/temp.linux-x86_64-3.9/src/kstring.o src/kstring.c: In function ‘ksprintf’: src/kstring.c:15:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 15 | if (l + 1 > s->m - s->l) { | ^ x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.9 -c src/pairixmodule.c -o build/temp.linux-x86_64-3.9/src/pairixmodule.o src/pairixmodule.c: In function ‘pairix_new’: src/pairixmodule.c:367:9: warning: unused variable ‘i’ [-Wunused-variable] 367 | int i; | ^ src/pairixmodule.c: In function ‘pairix_querys_2D’: src/pairixmodule.c:559:28: warning: passing argument 1 of ‘flip_region’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 559 | reg2 = flip_region(reg, get_region_split_character(self->tb)); | ^~~ In file included from src/pairixmodule.c:34: src/pairix.h:223:33: note: expected ‘char *’ but argument is of type ‘const char *’ 223 | char* flip_region(char *s, char region_split_character); | ~~~~~~^ src/pairixmodule.c: In function ‘pairix_get_blocknames’: src/pairixmodule.c:603:23: warning: initialization of ‘char **’ from incompatible pointer type ‘const char **’ [-Wincompatible-pointer-types] 603 | char **blocknames = ti_seqname(self->tb->idx, &n); | ^~~~~~~~~~ src/pairixmodule.c: In function ‘pairix_get_header’: src/pairixmodule.c:693:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 693 | while ((s = sequential_ti_read(siter, &len)) != 0) { | ^ src/pairixmodule.c:704:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 704 | while ((s = sequential_ti_read(siter, &len)) != 0) { | ^ src/pairixmodule.c: In function ‘pairix_get_chromsize’: src/pairixmodule.c:726:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 726 | while ((s = sequential_ti_read(siter, &len)) != 0) { | ^ src/pairixmodule.c:738:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 738 | while ((s = sequential_ti_read(siter, &len)) != 0) { | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/src/bgzf.o build/temp.linux-x86_64-3.9/src/bgzip.o build/temp.linux-x86_64-3.9/src/index.o build/temp.linux-x86_64-3.9/src/knetfile.o build/temp.linux-x86_64-3.9/src/kstring.o build/temp.linux-x86_64-3.9/src/pairixmodule.o -lz -o /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/pypairix.cpython-39-x86_64-linux-gnu.so I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_ext building 'pypairix' extension creating build/temp.linux-x86_64-3.8 creating build/temp.linux-x86_64-3.8/src x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.8 -c src/bgzf.c -o build/temp.linux-x86_64-3.8/src/bgzf.o src/bgzf.c: In function ‘bgzf_block_length’: src/bgzf.c:331:27: warning: unused variable ‘remaining’ [-Wunused-variable] 331 | int count, block_length, remaining; | ^~~~~~~~~ src/bgzf.c:330:40: warning: unused variable ‘compressed_block’ [-Wunused-variable] 330 | uint8_t header[BLOCK_HEADER_LENGTH], *compressed_block; | ^~~~~~~~~~~~~~~~ src/bgzf.c: In function ‘bgzf_flush’: src/bgzf.c:419:61: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 419 | if (fwrite(fp->compressed_block, 1, block_length, fp->fp) != block_length) { | ^~ src/bgzf.c: In function ‘bgzf_close’: src/bgzf.c:456:11: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 456 | int ret, count, block_length; | ^~~~~ x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.8 -c src/bgzip.c -o build/temp.linux-x86_64-3.8/src/bgzip.o x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.8 -c src/index.c -o build/temp.linux-x86_64-3.8/src/index.o src/index.c: In function ‘merge_chunks’: src/index.c:354:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 354 | for (l = 1; l < p->n; ++l) { | ^ src/index.c: In function ‘ti_index_core’: src/index.c:393:35: warning: overflow in conversion from ‘uint32_t’ {aka ‘unsigned int’} to ‘int32_t’ {aka ‘int’} changes value from ‘last_bin = 4294967295’ to ‘-1’ [-Woverflow] 393 | save_bin = save_tid = last_tid = last_bin = 0xffffffffu; | ^~~~~~~~ src/index.c:399:14: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare] 399 | if (lineno <= idx->conf.line_skip || str->s[0] == idx->conf.meta_char) { | ^~ src/index.c:423:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 423 | if (intv.bin != last_bin) { // then possibly write the binning index | ^~ src/index.c:431:21: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long int’} and ‘uint64_t’ {aka ‘long unsigned int’} [-Wsign-compare] 431 | if (bgzf_tell(fp) <= last_off) { | ^~ src/index.c: In function ‘ti_index_save’: src/index.c:510:17: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘khint_t’ {aka ‘unsigned int’} [-Wsign-compare] 510 | for (i = 0; i < kh_size(idx->tname); ++i) | ^ src/index.c:514:17: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘khint_t’ {aka ‘unsigned int’} [-Wsign-compare] 514 | for (i = 0; i < kh_size(idx->tname); ++i) | ^ src/index.c:534:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 534 | for (x = 0; (int)x < p->n; ++x) { | ^ src/index.c:539:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 539 | for (x = 0; (int)x < p->n; ++x) { | ^ src/index.c: In function ‘ti_index_load_core’: src/index.c:659:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 659 | for (x = 0; x < p->n; ++x) { | ^ src/index.c: In function ‘ti_parse_region2d’: src/index.c:864:69: warning: passing argument 1 of ‘ti_get_region_split_character’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 864 | char region_split_character = ti_get_region_split_character(idx); | ^~~ In file included from src/index.c:11: src/pairix.h:218:56: note: expected ‘ti_index_t *’ {aka ‘struct __ti_index_t *’} but argument is of type ‘const ti_index_t *’ {aka ‘const struct __ti_index_t *’} 218 | char ti_get_region_split_character(ti_index_t *idx); | ~~~~~~~~~~~~^~~ src/index.c:878:30: warning: passing argument 1 of ‘ti_get_sc2’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 878 | int dim = ti_get_sc2(idx)+1==0?1:2; | ^~~ In file included from src/index.c:11: src/pairix.h:209:36: note: expected ‘ti_index_t *’ {aka ‘struct __ti_index_t *’} but argument is of type ‘const ti_index_t *’ {aka ‘const struct __ti_index_t *’} 209 | int ti_get_sc2(ti_index_t *idx); | ~~~~~~~~~~~~^~~ src/index.c: In function ‘reg2bins’: src/index.c:974:49: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 974 | for (k = 1 + (beg>>TAD_LIDX_SHIFT_PL12); k <= 1 + (end>>TAD_LIDX_SHIFT_PL12); ++k) list[i++] = k; | ^~ src/index.c:975:48: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 975 | for (k = 9 + (beg>>TAD_LIDX_SHIFT_PL9); k <= 9 + (end>>TAD_LIDX_SHIFT_PL9); ++k) list[i++] = k; | ^~ src/index.c:976:48: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 976 | for (k = 73 + (beg>>TAD_LIDX_SHIFT_PL6); k <= 73 + (end>>TAD_LIDX_SHIFT_PL6); ++k) list[i++] = k; | ^~ src/index.c:977:48: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 977 | for (k = 585 + (beg>>TAD_LIDX_SHIFT_PL3); k <= 585 + (end>>TAD_LIDX_SHIFT_PL3); ++k) list[i++] = k; | ^~ src/index.c:978:44: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 978 | for (k = 4681 + (beg>>TAD_LIDX_SHIFT); k <= 4681 + (end>>TAD_LIDX_SHIFT); ++k) list[i++] = k; | ^~ src/index.c: In function ‘ti_iter_query’: src/index.c:1038:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare] 1038 | for (j = 0; j < p->n; ++j) | ^ src/index.c: In function ‘ti_querys_2d_general’: src/index.c:1219:31: warning: initialization of ‘char **’ from incompatible pointer type ‘const char **’ [-Wincompatible-pointer-types] 1219 | char **chrpairlist = ti_seqname(t->idx, &n_seqpair_list); | ^~~~~~~~~~ src/index.c:1236:59: warning: passing argument 2 of ‘ti_querys_2d_multi’ from incompatible pointer type [-Wincompatible-pointer-types] 1236 | sequential_iter_t *siter = ti_querys_2d_multi(t, regions, n_sub_list); | ^~~~~~~ | | | char ** In file included from src/index.c:11: src/pairix.h:131:73: note: expected ‘const char **’ but argument is of type ‘char **’ 131 | sequential_iter_t *ti_querys_2d_multi(pairix_t *t, const char **regs, int nRegs); | ~~~~~~~~~~~~~^~~~ src/index.c:1242:30: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1242 | *sp=0; char *chr1 = reg; | ^~~ src/index.c:1246:31: warning: initialization of ‘char **’ from incompatible pointer type ‘const char **’ [-Wincompatible-pointer-types] 1246 | char **chrpairlist = ti_seqname(t->idx, &n_seqpair_list); | ^~~~~~~~~~ src/index.c:1263:59: warning: passing argument 2 of ‘ti_querys_2d_multi’ from incompatible pointer type [-Wincompatible-pointer-types] 1263 | sequential_iter_t *siter = ti_querys_2d_multi(t, regions, n_sub_list); | ^~~~~~~ | | | char ** In file included from src/index.c:11: src/pairix.h:131:73: note: expected ‘const char **’ but argument is of type ‘char **’ 131 | sequential_iter_t *ti_querys_2d_multi(pairix_t *t, const char **regs, int nRegs); | ~~~~~~~~~~~~~^~~~ src/index.c: In function ‘ti_query_2d_tid’: src/index.c:1417:24: warning: returning ‘ti_iter_t’ {aka ‘struct __ti_iter_t *’} from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 1417 | if (name == 0) return ti_iter_first(); | ^~~~~~~~~~~~~~~ src/index.c: In function ‘create_merged_iter’: src/index.c:1469:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 1469 | if( miter->iu = calloc(n,sizeof(iter_unit*))) { | ^~~~~ src/index.c: In function ‘merged_ti_read’: src/index.c:1537:19: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1537 | miu[i]->s = ti_iter_read(miu[i]->t->fp, miu[i]->iter, miu[i]->len, seqonly); | ^ src/index.c:1543:17: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1543 | miu[0]->s = ti_iter_read(miu[0]->t->fp, miu[0]->iter, miu[0]->len, seqonly); // get next entry for the flushed iter | ^ src/index.c: In function ‘sequential_ti_read’: src/index.c:1573:15: warning: initialization discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1573 | char *s = ti_iter_read(siter->t->fp,siter->iter[siter->curr], len, 0); | ^~~~~~~~~~~~ src/index.c:1576:9: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1576 | s = ti_iter_read(siter->t->fp,siter->iter[siter->curr], len, 0); | ^ src/index.c: In function ‘get_unique_merged_seqname’: src/index.c:1643:22: warning: assignment to ‘char **’ from incompatible pointer type ‘const char **’ [-Wincompatible-pointer-types] 1643 | seqnames = ti_seqname(tbs[i]->idx,&len); | ^ src/index.c: In function ‘flip_region’: src/index.c:1744:19: warning: variable ‘split_pos’ set but not used [-Wunused-but-set-variable] 1744 | int l, i, l2, split_pos; | ^~~~~~~~~ src/index.c: In function ‘querys_2D_wrapper’: src/index.c:1911:34: warning: passing argument 1 of ‘flip_region’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1911 | char *reg2 = flip_region(reg, get_region_split_character(tb)); | ^~~ src/index.c:1743:27: note: expected ‘char *’ but argument is of type ‘const char *’ 1743 | char *flip_region ( char* s, char region_split_character) { | ~~~~~~^ src/index.c: In function ‘check_triangle’: src/index.c:1971:23: warning: initialization of ‘char **’ from incompatible pointer type ‘const char **’ [-Wincompatible-pointer-types] 1971 | char **seqnames = ti_seqname(idx,&len); | ^~~~~~~~~~ src/index.c:1977:64: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1977 | if(ti_get_tid(idx, reg2)!=-1) { free(seqnames); free(reg2); return(0); } // not a triangle | ^~~~ In file included from src/khash.h:94, from src/index.c:4: /usr/include/stdlib.h:565:25: note: expected ‘void *’ but argument is of type ‘const char *’ 565 | extern void free (void *__ptr) __THROW; | ~~~~~~^~~~~ src/index.c:1978:14: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1978 | free(reg2); | ^~~~ In file included from src/khash.h:94, from src/index.c:4: /usr/include/stdlib.h:565:25: note: expected ‘void *’ but argument is of type ‘const char *’ 565 | extern void free (void *__ptr) __THROW; | ~~~~~~^~~~~ x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.8 -c src/knetfile.c -o build/temp.linux-x86_64-3.8/src/knetfile.o x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.8 -c src/kstring.c -o build/temp.linux-x86_64-3.8/src/kstring.o src/kstring.c: In function ‘ksprintf’: src/kstring.c:15:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 15 | if (l + 1 > s->m - s->l) { | ^ x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_FILE_OFFSET_BITS=64 -D_USE_KNETFILE=1 -Isrc -I/usr/include/python3.8 -c src/pairixmodule.c -o build/temp.linux-x86_64-3.8/src/pairixmodule.o src/pairixmodule.c: In function ‘pairix_new’: src/pairixmodule.c:367:9: warning: unused variable ‘i’ [-Wunused-variable] 367 | int i; | ^ src/pairixmodule.c: In function ‘pairix_querys_2D’: src/pairixmodule.c:559:28: warning: passing argument 1 of ‘flip_region’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 559 | reg2 = flip_region(reg, get_region_split_character(self->tb)); | ^~~ In file included from src/pairixmodule.c:34: src/pairix.h:223:33: note: expected ‘char *’ but argument is of type ‘const char *’ 223 | char* flip_region(char *s, char region_split_character); | ~~~~~~^ src/pairixmodule.c: In function ‘pairix_get_blocknames’: src/pairixmodule.c:603:23: warning: initialization of ‘char **’ from incompatible pointer type ‘const char **’ [-Wincompatible-pointer-types] 603 | char **blocknames = ti_seqname(self->tb->idx, &n); | ^~~~~~~~~~ src/pairixmodule.c: In function ‘pairix_get_header’: src/pairixmodule.c:693:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 693 | while ((s = sequential_ti_read(siter, &len)) != 0) { | ^ src/pairixmodule.c:704:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 704 | while ((s = sequential_ti_read(siter, &len)) != 0) { | ^ src/pairixmodule.c: In function ‘pairix_get_chromsize’: src/pairixmodule.c:726:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 726 | while ((s = sequential_ti_read(siter, &len)) != 0) { | ^ src/pairixmodule.c:738:15: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 738 | while ((s = sequential_ti_read(siter, &len)) != 0) { | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/python-pairix-reh8mQ/python-pairix-0.3.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.8/src/bgzf.o build/temp.linux-x86_64-3.8/src/bgzip.o build/temp.linux-x86_64-3.8/src/index.o build/temp.linux-x86_64-3.8/src/knetfile.o build/temp.linux-x86_64-3.8/src/kstring.o build/temp.linux-x86_64-3.8/src/pairixmodule.o -lz -o /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/pypairix.cpython-38-x86_64-linux-gnu.so dh_auto_test -i -O--buildsystem=pybuild I: pybuild pybuild:284: cp -a /build/python-pairix-reh8mQ/python-pairix-0.3.7/samples /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build; cp -a /build/python-pairix-reh8mQ/python-pairix-0.3.7/VERSION.txt /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build; I: pybuild base:232: cd /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build; python3.9 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.9.0+, pytest-4.6.11, py-1.9.0, pluggy-0.13.0 rootdir: /build/python-pairix-reh8mQ/python-pairix-0.3.7 collected 48 items test/test_oldindex.py ........................ [ 50%] test/test_oldindex2.py ........................ [100%] =============================== warnings summary =============================== test/test_oldindex.py:58 /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/test/test_oldindex.py:58: DeprecationWarning: invalid escape sequence \s fields = line.rstrip().split('\s+') :58 :58 :58 :58 :58 :58 :58 :58 :58 :58 :58 :58 :58 :58 :58 :58 :58 :58: DeprecationWarning: invalid escape sequence \s test/test_oldindex2.py:57 /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/test/test_oldindex2.py:57: DeprecationWarning: invalid escape sequence \s fields = line.rstrip().split('\s+') :57 :57 :57 :57 :57 :57 :57 :57 :57 :57 :57 :57 :57 :57 :57 :57 :57 :57: DeprecationWarning: invalid escape sequence \s -- Docs: https://docs.pytest.org/en/latest/warnings.html =================== 48 passed, 36 warnings in 26.92 seconds ==================== The file is a triangle. The file is a triangle. The file is not a triangle. The file is a triangle. The file is a triangle. The file is not a triangle. I: pybuild pybuild:284: cp -a /build/python-pairix-reh8mQ/python-pairix-0.3.7/samples /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build; cp -a /build/python-pairix-reh8mQ/python-pairix-0.3.7/VERSION.txt /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build; I: pybuild base:232: cd /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build; python3.8 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.8.6, pytest-4.6.11, py-1.9.0, pluggy-0.13.0 rootdir: /build/python-pairix-reh8mQ/python-pairix-0.3.7 collected 48 items test/test_oldindex.py ........................ [ 50%] test/test_oldindex2.py ........................ [100%] =============================== warnings summary =============================== test/test_oldindex.py:58 /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/test/test_oldindex.py:58: DeprecationWarning: invalid escape sequence \s fields = line.rstrip().split('\s+') test/test_oldindex2.py:57 /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/test/test_oldindex2.py:57: DeprecationWarning: invalid escape sequence \s fields = line.rstrip().split('\s+') -- Docs: https://docs.pytest.org/en/latest/warnings.html ==================== 48 passed, 2 warnings in 23.56 seconds ==================== The file is a triangle. The file is a triangle. The file is not a triangle. The file is a triangle. The file is a triangle. The file is not a triangle. create-stamp debian/debhelper-build-stamp dh_testroot -i -O--buildsystem=pybuild dh_prep -i -O--buildsystem=pybuild dh_auto_install -i -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3.9 setup.py install --root /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix running install running build running build_ext running install_lib creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9 creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/pypairix.cpython-39-x86_64-linux-gnu.so -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_merged_nodups.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_merged_nodups.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_old_merged_nodups.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_merged_nodups.txt.bsorted.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/hg19.chrom.sizes.-chr -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/SRR1171591.variants.snp.vqsr.p.vcf.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_merged_nodups.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_merged_nodups.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_old_merged_nodups.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_merged_nodups.txt.bsorted.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/hg19.chrom.sizes.-chr -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/SRR1171591.variants.snp.vqsr.p.vcf.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_old_merged_nodups.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample2.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test.bed -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodup.tab.chrblock_sorted.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_4dn.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_juicer_shortform.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_merged_nodups.txt.bsorted.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.ff.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_old_merged_nodups.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_old_merged_nodups.txt.bsorted.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_juicer_shortform.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_old_merged_nodups.txt.bsorted.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/4dn.bsorted.chr21_22_only.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample1.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodup.tab.chrblock_sorted.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_merged_nodups.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test.regions2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/hg19.chrom.sizes.chr21_22_only:50000 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.ff.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_old_merged_nodups.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test.regions -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample2.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_4dn_2.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/mock.largechr.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/mock.largechr.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample1.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/hg19.chrom.sizes.chr21_22_only -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_merged_nodups.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/4dn.bsorted.chr21_22_only.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/SRR1171591.variants.snp.vqsr.p.vcf.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_4dn.cp.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.nofrag.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.nofrag.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_4dn_2.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_juicer_shortform.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_juicer_shortform.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index/test_4dn.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_old_merged_nodups.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample2.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test.bed -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodup.tab.chrblock_sorted.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_4dn.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_juicer_shortform.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_merged_nodups.txt.bsorted.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.ff.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_old_merged_nodups.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_old_merged_nodups.txt.bsorted.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_juicer_shortform.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_old_merged_nodups.txt.bsorted.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/4dn.bsorted.chr21_22_only.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample1.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodup.tab.chrblock_sorted.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_merged_nodups.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test.regions2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/hg19.chrom.sizes.chr21_22_only:50000 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.ff.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_old_merged_nodups.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test.regions -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample2.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_4dn_2.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/mock.largechr.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/mock.largechr.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample1.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/hg19.chrom.sizes.chr21_22_only -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/4dn.bsorted.chr21_22_only.largechr.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/SRR1171591.variants.snp.vqsr.p.vcf.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/merged_nodup.tab.chrblock_sorted.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/test_4dn.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/4dn.bsorted.chr21_22_only.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/merged_nodups.space.chrblock_sorted.subsample1.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/merged_nodup.tab.chrblock_sorted.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/mock.largechr.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/mock.largechr.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/merged_nodups.space.chrblock_sorted.subsample1.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/4dn.bsorted.chr21_22_only.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/SRR1171591.variants.snp.vqsr.p.vcf.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/old_index2/test_4dn.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_merged_nodups.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/4dn.bsorted.chr21_22_only.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/SRR1171591.variants.snp.vqsr.p.vcf.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_4dn.cp.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.nofrag.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.nofrag.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_4dn_2.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_juicer_shortform.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_juicer_shortform.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/samples/test_4dn.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.9_pairix/build/VERSION.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages running install_egg_info running egg_info creating pypairix.egg-info writing pypairix.egg-info/PKG-INFO writing dependency_links to pypairix.egg-info/dependency_links.txt writing top-level names to pypairix.egg-info/top_level.txt writing manifest file 'pypairix.egg-info/SOURCES.txt' reading manifest file 'pypairix.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pypairix.egg-info/SOURCES.txt' Copying pypairix.egg-info to /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.9/dist-packages/pypairix-0.3.7.egg-info Skipping SOURCES.txt running install_scripts I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix running install running build running build_ext running install_lib creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8 creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/pypairix.cpython-38-x86_64-linux-gnu.so -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_merged_nodups.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_merged_nodups.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_old_merged_nodups.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_merged_nodups.txt.bsorted.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/hg19.chrom.sizes.-chr -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/SRR1171591.variants.snp.vqsr.p.vcf.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_merged_nodups.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_merged_nodups.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_old_merged_nodups.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_merged_nodups.txt.bsorted.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/hg19.chrom.sizes.-chr -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/SRR1171591.variants.snp.vqsr.p.vcf.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_old_merged_nodups.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample2.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test.bed -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodup.tab.chrblock_sorted.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_4dn.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_juicer_shortform.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_merged_nodups.txt.bsorted.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.ff.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_old_merged_nodups.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_old_merged_nodups.txt.bsorted.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_juicer_shortform.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_old_merged_nodups.txt.bsorted.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/4dn.bsorted.chr21_22_only.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample1.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodup.tab.chrblock_sorted.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_merged_nodups.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test.regions2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/hg19.chrom.sizes.chr21_22_only:50000 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.ff.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_old_merged_nodups.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test.regions -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample2.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_4dn_2.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/mock.largechr.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/mock.largechr.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample1.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/hg19.chrom.sizes.chr21_22_only -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_merged_nodups.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/4dn.bsorted.chr21_22_only.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/SRR1171591.variants.snp.vqsr.p.vcf.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_4dn.cp.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.nofrag.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/merged_nodups.space.chrblock_sorted.subsample3.bsorted.nofrag.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_4dn_2.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_juicer_shortform.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_juicer_shortform.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index/test_4dn.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_old_merged_nodups.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample2.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test.bed -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodup.tab.chrblock_sorted.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_4dn.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_juicer_shortform.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_merged_nodups.txt.bsorted.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.ff.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_old_merged_nodups.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_old_merged_nodups.txt.bsorted.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_juicer_shortform.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_old_merged_nodups.txt.bsorted.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/4dn.bsorted.chr21_22_only.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample1.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodup.tab.chrblock_sorted.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_merged_nodups.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test.regions2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/hg19.chrom.sizes.chr21_22_only:50000 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.ff.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_old_merged_nodups.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test.regions -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample2.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_4dn_2.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/mock.largechr.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/mock.largechr.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample1.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/hg19.chrom.sizes.chr21_22_only -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/4dn.bsorted.chr21_22_only.largechr.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples creating /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/SRR1171591.variants.snp.vqsr.p.vcf.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/merged_nodup.tab.chrblock_sorted.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/test_4dn.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/4dn.bsorted.chr21_22_only.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/merged_nodups.space.chrblock_sorted.subsample1.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/merged_nodup.tab.chrblock_sorted.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/mock.largechr.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/mock.largechr.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/4dn.bsorted.chr21_22_only.nontriangle.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/merged_nodups.space.chrblock_sorted.subsample1.txt.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/4dn.bsorted.chr21_22_only.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/SRR1171591.variants.snp.vqsr.p.vcf.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/old_index2/test_4dn.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples/old_index2 copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.txt.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_merged_nodups.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/4dn.bsorted.chr21_22_only.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/SRR1171591.variants.snp.vqsr.p.vcf.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_4dn.cp.pairs -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.nofrag.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/merged_nodups.space.chrblock_sorted.subsample3.bsorted.nofrag.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_4dn_2.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_juicer_shortform.bsorted.pairs.gz.px2 -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_juicer_shortform.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/samples/test_4dn.pairs.gz -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/samples copying /build/python-pairix-reh8mQ/python-pairix-0.3.7/.pybuild/cpython3_3.8_pairix/build/VERSION.txt -> /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages running install_egg_info running egg_info writing pypairix.egg-info/PKG-INFO writing dependency_links to pypairix.egg-info/dependency_links.txt writing top-level names to pypairix.egg-info/top_level.txt reading manifest file 'pypairix.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'pypairix.egg-info/SOURCES.txt' Copying pypairix.egg-info to /build/python-pairix-reh8mQ/python-pairix-0.3.7/debian/python3-pairix/usr/lib/python3.8/dist-packages/pypairix-0.3.7.egg-info Skipping SOURCES.txt running install_scripts debian/rules override_dh_install make[1]: Entering directory '/build/python-pairix-reh8mQ/python-pairix-0.3.7' tar caf samples.tar.xz samples --mode=go=rX,u+rw,a-s --owner=0 --group=0 --numeric-owner dh_install find debian/python3-pairix/usr/lib -name samples -type d | xargs rm -rf find debian/*/usr/lib -name VERSION.txt -delete make[1]: Leaving directory '/build/python-pairix-reh8mQ/python-pairix-0.3.7' dh_installdocs -i -O--buildsystem=pybuild dh_installchangelogs -i -O--buildsystem=pybuild dh_python3 -i -O--buildsystem=pybuild E: dh_python3 dh_python3:176: no package to act on (python3-foo or one with ${python3:Depends} in Depends) dh_installsystemduser -i -O--buildsystem=pybuild dh_perl -i -O--buildsystem=pybuild dh_link -i -O--buildsystem=pybuild dh_strip_nondeterminism -i -O--buildsystem=pybuild dh_compress -i -O--buildsystem=pybuild dh_fixperms -i -O--buildsystem=pybuild dh_missing -i -O--buildsystem=pybuild dh_installdeb -i -O--buildsystem=pybuild dh_gencontrol -i -O--buildsystem=pybuild dh_md5sums -i -O--buildsystem=pybuild dh_builddeb -i -O--buildsystem=pybuild dpkg-deb: building package 'python-pairix-examples' in '../python-pairix-examples_0.3.7-3_all.deb'. dpkg-genbuildinfo --build=all dpkg-genchanges --build=all >../python-pairix_0.3.7-3_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/python-pairix-reh8mQ /tmp/python-pairix-0.3.7-3yh21ad52 I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.dTuxZ0Wq4U... I: success in 1326.8143 seconds md5: Value of 'md5' differs for python-pairix-examples_0.3.7-3_all.deb md5: Size differs for python-pairix-examples_0.3.7-3_all.deb sha1: Value of 'sha1' differs for python-pairix-examples_0.3.7-3_all.deb sha1: Size differs for python-pairix-examples_0.3.7-3_all.deb sha256: Value of 'sha256' differs for python-pairix-examples_0.3.7-3_all.deb sha256: Size differs for python-pairix-examples_0.3.7-3_all.deb Checksums: FAIL diffoscope run passed