Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/p/python-gffutils/python-gffutils_0.11.0-1_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/python-gffutils-0.11.0-146c2sv23/python-gffutils_0.11.0-1_all.buildinfo Get source package info: python-gffutils=0.11.0-1 Source URL: http://snapshot.notset.fr/mr/package/python-gffutils/0.11.0-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6.1 bedtools=2.30.0+dfsg-2 binutils=2.38.50.20220707-1 binutils-common=2.38.50.20220707-1 binutils-x86-64-linux-gnu=2.38.50.20220707-1 bsdextrautils=2.38-5 bsdutils=1:2.38-4 build-essential=12.9 bzip2=1.0.8-5 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.3.0-4 dash=0.5.11+git20210903+057cd650a4ed-8 debconf=1.5.79 debhelper=13.8 debianutils=5.7-0.2 dh-autoreconf=20 dh-python=5.20220403 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.9 dpkg-dev=1.21.9 dwz=0.14-1 file=1:5.41-4 findutils=4.9.0-3 fonts-urw-base35=20200910-1 g++=4:11.2.0-2 g++-11=11.3.0-4 gcc=4:11.2.0-2 gcc-11=11.3.0-4 gcc-11-base=11.3.0-4 gcc-12-base=12.1.0-5 gettext=0.21-6 gettext-base=0.21-6 grep=3.7-1 groff-base=1.22.4-8 gzip=1.12-1 help2man=1.49.2 hostname=3.23 init-system-helpers=1.64 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libarchive-zip-perl=1.68-1 libasan6=11.3.0-4 libatomic1=12.1.0-5 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libbinutils=2.38.50.20220707-1 libblas3=3.10.1-2 libblkid1=2.38-4 libbrotli1=1.0.9-2+b3 libbsd0=0.11.6-1 libbz2-1.0=1.0.8-5 libc-bin=2.33-8 libc-dev-bin=2.33-8 libc6=2.33-8 libc6-dev=2.33-8 libcap-ng0=0.8.3-1 libcap2=1:2.44-1 libcc1-0=12.1.0-5 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.28-2 libcrypt1=1:4.4.28-2 libctf-nobfd0=2.38.50.20220707-1 libctf0=2.38.50.20220707-1 libcurl3-gnutls=7.84.0-2 libdb5.3=5.3.28+dfsg1-0.10 libdebconfclient0=0.263 libdebhelper-perl=13.8 libdeflate0=1.12-1 libdpkg-perl=1.21.9 libelf1=0.187-1 libexpat1=2.4.8-1 libffi8=3.4.2-4 libfile-stripnondeterminism-perl=1.13.0-1 libfreetype6=2.12.1+dfsg-3 libfribidi0=1.0.8-2.1 libgcc-11-dev=11.3.0-4 libgcc-s1=12.1.0-5 libgcrypt20=1.10.1-2 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgfortran5=12.1.0-5 libglib2.0-0=2.72.3-1 libgmp10=2:6.2.1+dfsg1-1 libgnutls30=3.7.6-2 libgomp1=12.1.0-5 libgpg-error0=1.45-2 libgprofng0=2.38.50.20220707-1 libgraphite2-3=1.3.14-1 libgssapi-krb5-2=1.19.2-2+b2 libharfbuzz0b=2.7.4-1+b1 libhogweed6=3.7.3-1 libhts3=1.13+ds-2+b1 libhtscodecs2=1.2.2-1 libicu71=71.1-3 libidn2-0=2.3.3-1 libimagequant0=2.17.0-1 libisl23=0.24-2 libitm1=12.1.0-5 libjbig0=2.1-3.1+b2 libjpeg62-turbo=1:2.1.2-1 libk5crypto3=1.19.2-2+b2 libkeyutils1=1.6.3-1 libkrb5-3=1.19.2-2+b2 libkrb5support0=1.19.2-2+b2 liblapack3=3.10.1-2 liblcms2-2=2.12~rc1-2 libldap-2.5-0=2.5.12+dfsg-2 liblerc3=3.0+ds-1 liblocale-gettext-perl=1.07-4+b2 liblsan0=12.1.0-5 liblz4-1=1.9.3-2 liblzma5=5.2.5-2.1 libmagic-mgc=1:5.41-4 libmagic1=1:5.41-4 libmd0=1.0.4-2 libmount1=2.38-4 libmpc3=1.2.1-2 libmpdec3=2.5.1-2 libmpfr6=4.1.0-3 libncursesw6=6.3+20220423-2 libnettle8=3.7.3-1 libnghttp2-14=1.47.0-1+b1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libopenjp2-7=2.5.0-1 libp11-kit0=0.24.1-1 libpam-modules=1.4.0-13 libpam-modules-bin=1.4.0-13 libpam-runtime=1.4.0-13 libpam0g=1.4.0-13 libpcre2-8-0=10.40-1 libpcre3=2:8.39-14 libperl5.34=5.34.0-5 libpipeline1=1.5.6-1 libpng16-16=1.6.37-5 libpsl5=0.21.0-1.2 libpython3-stdlib=3.10.5-1 libpython3.10-minimal=3.10.5-1 libpython3.10-stdlib=3.10.5-1 libpython3.9-minimal=3.9.13-1 libpython3.9-stdlib=3.9.13-1 libquadmath0=12.1.0-5 libraqm0=0.7.0-4 libreadline8=8.1.2-1.2 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.28+dfsg-6 libsasl2-modules-db=2.1.28+dfsg-6 libseccomp2=2.5.4-1 libselinux1=3.4-1 libsigsegv2=2.14-1 libsmartcols1=2.38-4 libsqlite3-0=3.39.1-1 libssh2-1=1.10.0-3+b1 libssl3=3.0.4-2 libstdc++-11-dev=11.3.0-4 libstdc++6=12.1.0-5 libsub-override-perl=0.09-3 libsystemd0=251.2-8 libtasn1-6=4.18.0-4 libtiff5=4.4.0-3 libtinfo6=6.3+20220423-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.7-4 libtsan0=11.3.0-4 libubsan1=12.1.0-5 libuchardet0=0.0.7-1 libudev1=251.2-8 libunistring2=1.0-1 libuuid1=2.38-4 libwebp7=1.2.2-2+b1 libwebpdemux2=1.2.2-2+b1 libwebpmux3=1.2.2-2+b1 libxau6=1:1.0.9-1 libxcb1=1.14-3 libxdmcp6=1:1.1.2-3 libxml2=2.9.14+dfsg-1 libzstd1=1.5.2+dfsg-1 linux-libc-dev=5.18.5-1 login=1:4.11.1+dfsg1-2 lsb-base=11.2 m4=1.4.18-5 mailcap=3.70+nmu1 make=4.3-4.1 man-db=2.10.2-1 mawk=1.3.4.20200120-3.1 media-types=8.0.0 mime-support=3.66 ncurses-base=6.3+20220423-2 ncurses-bin=6.3+20220423-2 patch=2.7.6-7 perl=5.34.0-5 perl-base=5.34.0-5 perl-modules-5.34=5.34.0-5 po-debconf=1.0.21+nmu1 python3=3.10.5-1 python3-all=3.10.5-1 python3-argcomplete=2.0.0-1 python3-argh=0.26.2-2 python3-biopython=1.79+dfsg-3 python3-distutils=3.10.5-2 python3-lib2to3=3.10.5-2 python3-minimal=3.10.5-1 python3-nose=1.3.7-8 python3-numpy=1:1.21.5-1 python3-pil=9.2.0-1 python3-pkg-resources=59.6.0-1.2 python3-pybedtools=0.9.0-1 python3-pyfaidx=0.6.4-1 python3-pysam=0.17.0+ds-2+b1 python3-renderpm=3.6.11-1 python3-reportlab=3.6.11-1 python3-reportlab-accel=3.6.11-1 python3-setuptools=59.6.0-1.2 python3-simplejson=3.17.6-1 python3-six=1.16.0-3 python3.10=3.10.5-1 python3.10-minimal=3.10.5-1 python3.9=3.9.13-1 python3.9-minimal=3.9.13-1 readline-common=8.1.2-1.2 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sgml-base=1.30 sysvinit-utils=3.03-1 tar=1.34+dfsg-1 tzdata=2022a-1 util-linux=2.38-4 util-linux-extra=2.38-4 w3c-sgml-lib=1.3-3 xml-core=0.18+nmu1 xz-utils=5.2.5-2.1 zlib1g=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220720T032429Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220720T032429Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220718T151428Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220713T220842Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d python-gffutils=0.11.0-1 && mkdir -p /build/python-gffutils-7cFilr && dpkg-source --no-check -x /*.dsc /build/python-gffutils-7cFilr/python-gffutils-0.11.0 && chown -R builduser:builduser /build/python-gffutils-7cFilr" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/python-gffutils-7cFilr/python-gffutils-0.11.0 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1658067224" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/python-gffutils-7cFilr /tmp/python-gffutils-0.11.0-146c2sv23 bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220713T220842Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.Z286uLMilp as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.Z286uLMilp Reading package lists... Building dependency tree... util-linux is already the newest version (2.38-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 136 kB of archives. After this operation, 401 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220713T220842Z unstable/main amd64 libfakeroot amd64 1.29-1 [48.5 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220713T220842Z unstable/main amd64 fakeroot amd64 1.29-1 [87.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 136 kB in 0s (1018 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4623 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.29-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.29-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.29-1_amd64.deb ... Unpacking fakeroot (1.29-1) ... Setting up libfakeroot:amd64 (1.29-1) ... Setting up fakeroot (1.29-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-8) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220720T032429Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220720T032429Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220718T151428Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220713T220842Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.Z286uLMilp Get:1 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm InRelease [157 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220718T151428Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220713T220842Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm/main Sources [12.1 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm/main amd64 Packages [11.5 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220718T151428Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220718T151428Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220718T151428Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220718T151428Z unstable/main amd64 Packages [12.5 MB] Fetched 36.5 MB in 30s (1224 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.Z286uLMilp I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d python-gffutils=0.11.0-1 && mkdir -p /build/python-gffutils-7cFilr && dpkg-source --no-check -x /*.dsc /build/python-gffutils-7cFilr/python-gffutils-0.11.0 && chown -R builduser:builduser /build/python-gffutils-7cFilr"' exec /tmp/mmdebstrap.Z286uLMilp Reading package lists... NOTICE: 'python-gffutils' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/python-gffutils.git Please use: git clone https://salsa.debian.org/med-team/python-gffutils.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1559 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm/main python-gffutils 0.11.0-1 (dsc) [2324 B] Get:2 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm/main python-gffutils 0.11.0-1 (tar) [1551 kB] Get:3 http://snapshot.notset.fr/archive/debian/20220720T032429Z bookworm/main python-gffutils 0.11.0-1 (diff) [4776 B] Fetched 1559 kB in 1s (1201 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'python-gffutils_0.11.0-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting python-gffutils in /build/python-gffutils-7cFilr/python-gffutils-0.11.0 dpkg-source: info: unpacking python-gffutils_0.11.0.orig.tar.gz dpkg-source: info: unpacking python-gffutils_0.11.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying newer_bedtools dpkg-source: info: applying python3 I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/python-gffutils-7cFilr/python-gffutils-0.11.0 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1658067224" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.Z286uLMilp dpkg-buildpackage: info: source package python-gffutils dpkg-buildpackage: info: source version 0.11.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:239: python3.10 setup.py clean /usr/lib/python3/dist-packages/setuptools/dist.py:493: UserWarning: Normalizing ' 0.11.0' to '0.11.0' warnings.warn(tmpl.format(**locals())) running clean removing '/build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.10' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-indep dh binary-indep --with python3 --buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_autoreconf -i -O--buildsystem=pybuild dh_auto_configure -i -O--buildsystem=pybuild I: pybuild base:239: python3.10 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:493: UserWarning: Normalizing ' 0.11.0' to '0.11.0' warnings.warn(tmpl.format(**locals())) running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/python-gffutils-7cFilr/python-gffutils-0.11.0' dh_auto_build I: pybuild base:239: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:493: UserWarning: Normalizing ' 0.11.0' to '0.11.0' warnings.warn(tmpl.format(**locals())) running build running build_py creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/__init__.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/attributes.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/bins.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/biopython_integration.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/constants.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/convert.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/create.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/exceptions.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/feature.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/gffwriter.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/helpers.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/inspect.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/interface.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/merge_criteria.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/parser.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/pybedtools_integration.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/version.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils copying gffutils/iterators.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils package init file 'gffutils/scripts/__init__.py' not found (or not a regular file) creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/scripts copying gffutils/scripts/gffutils-flybase-convert.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/scripts creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/__init__.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/attr_test_cases.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/expected.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/feature_test.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/helpers_test.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/parser_test.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/performance_evaluation.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/synth_test_base.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/test_biopython_integration.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/test_issues.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/test_iterators.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/test_merge.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/test_merge_all.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test copying gffutils/test/test.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test package init file 'gffutils/test/data/__init__.py' not found (or not a regular file) creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/F3-unique-3.v2.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/FBgn0031208.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/FBgn0031208.gtf -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_gene_ids.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_transcript_ids.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.chromsizes.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/c_elegans_WS199_ann_gff.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/c_elegans_WS199_dna_shortened.fa -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/c_elegans_WS199_shortened_gff.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/dm6-chr2L.fa -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/dmel-all-no-analysis-r5.49_50k_lines.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/download-large-annotation-files.sh -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/ensembl_gtf.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/gencode-v19.gtf -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/gencode.vM8.5000_gene_ids.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/gencode.vM8.5000_transcript_ids.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/gencode.vM8.chromsizes.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/gff_example1.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/gff_example1.gff3.gz -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/glimmer_nokeyval.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/gms2_example.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/hybrid1.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/intro_docs_example.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/issue167.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/issue174.gtf -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/issue181.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/jgi_gff2.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/keep-order-test.gtf -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/keyval_sep_in_attrs.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/mouse_extra_comma.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/ncbi_gff3.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/nonascii -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/random-chr.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/sharr.gtf -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/synthetic.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/unsanitized.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/wormbase_gff2.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data copying gffutils/test/data/wormbase_gff2_alt.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data running build_scripts creating build creating build/scripts-3.10 copying and adjusting gffutils/scripts/gffutils-cli -> build/scripts-3.10 changing mode of build/scripts-3.10/gffutils-cli from 644 to 755 PYTHONPATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0 PATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0/gffutils/scripts/:/usr/sbin:/usr/bin:/sbin:/bin:/usr/sbin:/usr/bin:/sbin:/bin \ help2man --version-string=0.11.0 --no-info \ --name="Command line interface for python-gffutils." \ gffutils-cli > debian/gffutils-cli.1 PYTHONPATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0 PATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0/gffutils/scripts/:/usr/sbin:/usr/bin:/sbin:/bin:/usr/sbin:/usr/bin:/sbin:/bin \ help2man --version-string=0.11.0 --no-info \ --include <(echo -e "[NAME]\ngffutils-cli_fetch \- Fetch IDs") \ 'gffutils-cli fetch' > debian/gffutils-cli-fetch.1 PYTHONPATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0 PATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0/gffutils/scripts/:/usr/sbin:/usr/bin:/sbin:/bin:/usr/sbin:/usr/bin:/sbin:/bin \ help2man --version-string=0.11.0 --no-info \ --include <(echo -e "[NAME]\ngffutils-cli_children \- Fetch children from the database according to ID") \ 'gffutils-cli children' > debian/gffutils-cli-children.1 PYTHONPATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0 PATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0/gffutils/scripts/:/usr/sbin:/usr/bin:/sbin:/bin:/usr/sbin:/usr/bin:/sbin:/bin \ help2man --version-string=0.11.0 --no-info \ --include <(echo -e "[NAME]\ngffutils-cli_parents \- Fetch parents from the database according to ID") \ 'gffutils-cli parents' > debian/gffutils-cli-parents.1 PYTHONPATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0 PATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0/gffutils/scripts/:/usr/sbin:/usr/bin:/sbin:/bin:/usr/sbin:/usr/bin:/sbin:/bin \ help2man --version-string=0.11.0 --no-info \ --include <(echo -e "[NAME]\ngffutils-cli_region \- Returns features within provided genomic coordinates") \ 'gffutils-cli region' > debian/gffutils-cli-region.1 PYTHONPATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0 PATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0/gffutils/scripts/:/usr/sbin:/usr/bin:/sbin:/bin:/usr/sbin:/usr/bin:/sbin:/bin \ help2man --version-string=0.11.0 --no-info \ --include <(echo -e "[NAME]\ngffutils-cli_create \- Create a database") \ 'gffutils-cli create' > debian/gffutils-cli-create.1 PYTHONPATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0 PATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0/gffutils/scripts/:/usr/sbin:/usr/bin:/sbin:/bin:/usr/sbin:/usr/bin:/sbin:/bin \ help2man --version-string=0.11.0 --no-info \ --include <(echo -e "[NAME]\ngffutils-cli_common \- Identify child features in common") \ 'gffutils-cli common' > debian/gffutils-cli-common.1 PYTHONPATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0 PATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0/gffutils/scripts/:/usr/sbin:/usr/bin:/sbin:/bin:/usr/sbin:/usr/bin:/sbin:/bin \ help2man --version-string=0.11.0 --no-info \ --include <(echo -e "[NAME]\ngffutils-cli_clean \- Perform various QC operations to clean a GFF or GTF file") \ 'gffutils-cli clean' > debian/gffutils-cli-clean.1 PYTHONPATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0 PATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0/gffutils/scripts/:/usr/sbin:/usr/bin:/sbin:/bin:/usr/sbin:/usr/bin:/sbin:/bin \ help2man --version-string=0.11.0 --no-info \ --include <(echo -e "[NAME]\ngffutils-cli_sanitize \- Sanitize a GFF file") \ 'gffutils-cli sanitize' > debian/gffutils-cli-sanitize.1 PYTHONPATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0 PATH=/build/python-gffutils-7cFilr/python-gffutils-0.11.0/gffutils/scripts/:/usr/sbin:/usr/bin:/sbin:/bin:/usr/sbin:/usr/bin:/sbin:/bin \ help2man --version-string=0.11.0 --no-info \ --include <(echo -e "[NAME]\ngffutils-cli_rmdups \- Remove duplicates from a GFF file") \ 'gffutils-cli rmdups' > debian/gffutils-cli-rmdups.1 make[1]: Leaving directory '/build/python-gffutils-7cFilr/python-gffutils-0.11.0' dh: command-omitted: The call to "dh_auto_test -i -O--buildsystem=pybuild" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -i -O--buildsystem=pybuild dh_prep -i -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-gffutils/ -i -O--buildsystem=pybuild I: pybuild base:239: /usr/bin/python3 setup.py install --root /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils /usr/lib/python3/dist-packages/setuptools/dist.py:493: UserWarning: Normalizing ' 0.11.0' to '0.11.0' warnings.warn(tmpl.format(**locals())) running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py package init file 'gffutils/scripts/__init__.py' not found (or not a regular file) package init file 'gffutils/test/data/__init__.py' not found (or not a regular file) running build_scripts running install_lib creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10 creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/__init__.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/attributes.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/bins.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/biopython_integration.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/constants.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/convert.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/create.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/exceptions.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/feature.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/gffwriter.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/helpers.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/inspect.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/interface.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/merge_criteria.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/parser.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/pybedtools_integration.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/version.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/iterators.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/scripts copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/scripts/gffutils-flybase-convert.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/scripts creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/__init__.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/attr_test_cases.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/expected.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/feature_test.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/helpers_test.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/parser_test.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/performance_evaluation.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/synth_test_base.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/test_biopython_integration.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/test_issues.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/test_iterators.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/test_merge.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/test_merge_all.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/test.py -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/F3-unique-3.v2.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/FBgn0031208.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/FBgn0031208.gtf -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_gene_ids.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.5000_transcript_ids.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/Saccharomyces_cerevisiae.R64-1-1.83.chromsizes.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/c_elegans_WS199_ann_gff.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/c_elegans_WS199_dna_shortened.fa -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/c_elegans_WS199_shortened_gff.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/dm6-chr2L.fa -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/dmel-all-no-analysis-r5.49_50k_lines.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/download-large-annotation-files.sh -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/ensembl_gtf.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/gencode-v19.gtf -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/gencode.vM8.5000_gene_ids.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/gencode.vM8.5000_transcript_ids.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/gencode.vM8.chromsizes.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/gff_example1.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/gff_example1.gff3.gz -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/glimmer_nokeyval.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/gms2_example.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/hybrid1.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/intro_docs_example.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/issue167.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/issue174.gtf -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/issue181.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/jgi_gff2.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/keep-order-test.gtf -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/keyval_sep_in_attrs.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/mouse_extra_comma.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/ncbi_gff3.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/nonascii -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/random-chr.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/sharr.gtf -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/synthetic.gff3 -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/unsanitized.gff -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/wormbase_gff2.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data copying /build/python-gffutils-7cFilr/python-gffutils-0.11.0/.pybuild/cpython3_3.10_gffutils/build/gffutils/test/data/wormbase_gff2_alt.txt -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/data byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/__init__.py to __init__.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/attributes.py to attributes.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/bins.py to bins.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/biopython_integration.py to biopython_integration.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/constants.py to constants.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/convert.py to convert.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/create.py to create.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/exceptions.py to exceptions.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/feature.py to feature.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/gffwriter.py to gffwriter.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/helpers.py to helpers.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/inspect.py to inspect.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/interface.py to interface.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/merge_criteria.py to merge_criteria.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/parser.py to parser.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/pybedtools_integration.py to pybedtools_integration.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/version.py to version.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/iterators.py to iterators.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/scripts/gffutils-flybase-convert.py to gffutils-flybase-convert.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/__init__.py to __init__.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/attr_test_cases.py to attr_test_cases.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/expected.py to expected.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/feature_test.py to feature_test.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/helpers_test.py to helpers_test.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/parser_test.py to parser_test.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/performance_evaluation.py to performance_evaluation.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/synth_test_base.py to synth_test_base.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/test_biopython_integration.py to test_biopython_integration.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/test_issues.py to test_issues.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/test_iterators.py to test_iterators.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/test_merge.py to test_merge.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/test_merge_all.py to test_merge_all.cpython-310.pyc byte-compiling /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils/test/test.py to test.cpython-310.pyc running install_egg_info running egg_info writing gffutils.egg-info/PKG-INFO writing dependency_links to gffutils.egg-info/dependency_links.txt writing requirements to gffutils.egg-info/requires.txt writing top-level names to gffutils.egg-info/top_level.txt reading manifest file 'gffutils.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.rst' under directory 'docs/source' warning: no files found matching '*.py' under directory 'docs/source' warning: no files found matching '*' under directory 'docs/source/images' warning: no files found matching 'docs/Makefile' warning: no files found matching 'docs/make.bat' warning: no files found matching 'gffutils/test/data/__init__.py' warning: no files found matching 'gffutils/test/data/t.py' adding license file 'LICENSE' writing manifest file 'gffutils.egg-info/SOURCES.txt' Copying gffutils.egg-info to /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/lib/python3.10/dist-packages/gffutils-0.11.0.egg-info Skipping SOURCES.txt running install_scripts creating /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/bin copying build/scripts-3.10/gffutils-cli -> /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/bin changing mode of /build/python-gffutils-7cFilr/python-gffutils-0.11.0/debian/python3-gffutils/usr/bin/gffutils-cli to 755 debian/rules override_dh_install make[1]: Entering directory '/build/python-gffutils-7cFilr/python-gffutils-0.11.0' dh_install find debian -name "*.bak" -delete make[1]: Leaving directory '/build/python-gffutils-7cFilr/python-gffutils-0.11.0' dh_installdocs -i -O--buildsystem=pybuild dh_installchangelogs -i -O--buildsystem=pybuild dh_installman -i -O--buildsystem=pybuild dh_python3 -i -O--buildsystem=pybuild dh_installsystemduser -i -O--buildsystem=pybuild dh_lintian -i -O--buildsystem=pybuild dh_perl -i -O--buildsystem=pybuild dh_link -i -O--buildsystem=pybuild dh_strip_nondeterminism -i -O--buildsystem=pybuild dh_compress -i -O--buildsystem=pybuild dh_fixperms -i -O--buildsystem=pybuild dh_missing -i -O--buildsystem=pybuild dh_installdeb -i -O--buildsystem=pybuild dh_gencontrol -i -O--buildsystem=pybuild dh_md5sums -i -O--buildsystem=pybuild dh_builddeb -i -O--buildsystem=pybuild dpkg-deb: building package 'python3-gffutils' in '../python3-gffutils_0.11.0-1_all.deb'. dpkg-genbuildinfo --build=all -O../python-gffutils_0.11.0-1_all.buildinfo dpkg-genchanges --build=all -O../python-gffutils_0.11.0-1_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/python-gffutils-7cFilr /tmp/python-gffutils-0.11.0-146c2sv23 I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.Z286uLMilp... I: success in 615.5346 seconds md5: Value of 'md5' differs for python3-gffutils_0.11.0-1_all.deb md5: Size differs for python3-gffutils_0.11.0-1_all.deb sha1: Value of 'sha1' differs for python3-gffutils_0.11.0-1_all.deb sha1: Size differs for python3-gffutils_0.11.0-1_all.deb sha256: Value of 'sha256' differs for python3-gffutils_0.11.0-1_all.deb sha256: Size differs for python3-gffutils_0.11.0-1_all.deb Checksums: FAIL Cannot generate diffoscope for python3-gffutils_0.11.0-1_all.deb: RetryError[]