Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/p/python-csb/python-csb_1.2.5+dfsg-5_all.buildinfo
Use metasnap for getting required timestamps
New buildinfo file: /tmp/python-csb-1.2.5+dfsg-532piz5aj/python-csb_1.2.5+dfsg-5_all.buildinfo
Get source package info: python-csb=1.2.5+dfsg-5
Source URL: http://snapshot.notset.fr/mr/package/python-csb/1.2.5+dfsg-5/srcfiles?fileinfo=1
env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11 automake=1:1.16.1-4 autopoint=0.19.8.1-9 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.46 bash=5.0-4 binutils=2.32.51.20190909-1 binutils-common=2.32.51.20190909-1 binutils-x86-64-linux-gnu=2.32.51.20190909-1 bsdmainutils=11.1.2+b1 bsdutils=1:2.34-0.1 build-essential=12.8 bzip2=1.0.8-2 coreutils=8.30-3+b1 cpp=4:9.2.1-3.1 cpp-9=9.2.1-8 dash=0.5.10.2-6 debconf=1.5.73 debhelper=12.6.1 debianutils=4.9 dh-autoreconf=19 dh-python=4.20190722 dh-strip-nondeterminism=1.6.0-1 diffutils=1:3.7-3 dpkg=1.19.7 dpkg-dev=1.19.7 dwz=0.13-1 fdisk=2.34-0.1 file=1:5.37-5 findutils=4.7.0-1 fonts-lyx=2.3.3-2 g++=4:9.2.1-3.1 g++-9=9.2.1-8 gcc=4:9.2.1-3.1 gcc-9=9.2.1-8 gcc-9-base=9.2.1-8 gettext=0.19.8.1-9 gettext-base=0.19.8.1-9 grep=3.3-1 groff-base=1.22.4-3 gzip=1.9-3+b1 hostname=3.22+b1 init-system-helpers=1.57 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-5 libarchive-zip-perl=1.66-2 libasan5=9.2.1-8 libatomic1=9.2.1-8 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-2 libaudit1=1:2.8.5-2 libbinutils=2.32.51.20190909-1 libblas3=3.8.0-6 libblkid1=2.34-0.1 libbsd0=0.10.0-1 libbz2-1.0=1.0.8-2 libc-bin=2.29-2 libc-dev-bin=2.29-2 libc6=2.29-2 libc6-dev=2.29-2 libcap-ng0=0.7.9-2+b1 libcc1-0=9.2.1-8 libcroco3=0.6.13-1 libdb5.3=5.3.28+dfsg1-0.6 libdebconfclient0=0.249 libdebhelper-perl=12.6.1 libdpkg-perl=1.19.7 libelf1=0.176-1.1 libexpat1=2.2.9-1 libfdisk1=2.34-0.1 libffi6=3.2.1-9 libfile-stripnondeterminism-perl=1.6.0-1 libfreetype6=2.9.1-4 libgcc-9-dev=9.2.1-8 libgcc1=1:9.2.1-8 libgcrypt20=1.8.5-3 libgdbm-compat4=1.18.1-5 libgdbm6=1.18.1-5 libgfortran5=9.2.1-8 libglib2.0-0=2.62.0-3 libgmp10=2:6.1.2+dfsg-4 libgomp1=9.2.1-8 libgpg-error0=1.36-7 libicu63=63.2-2 libisl21=0.21-2 libitm1=9.2.1-8 libjs-jquery=3.3.1~dfsg-3 libjs-jquery-ui=1.12.1+dfsg-5 liblapack3=3.8.0-6 liblbfgsb0=3.0+dfsg.3-7 liblsan0=9.2.1-8 liblz4-1=1.8.3-1+b1 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.37-5 libmagic1=1:5.37-5 libmount1=2.34-0.1 libmpc3=1.1.0-1 libmpdec2=2.4.2-2 libmpfr6=4.0.2-1 libncurses6=6.1+20190803-1 libncursesw6=6.1+20190803-1 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpcre2-8-0=10.32-5+b1 libpcre3=2:8.39-12+b1 libperl5.28=5.28.1-6 libpipeline1=1.5.1-2 libpng16-16=1.6.37-1 libpython3-stdlib=3.7.5-1 libpython3.7-minimal=3.7.5~rc1-1 libpython3.7-stdlib=3.7.5~rc1-1 libquadmath0=9.2.1-8 libreadline8=8.0-3 libseccomp2=2.4.1-2 libselinux1=2.9-2+b2 libsigsegv2=2.12-2 libsmartcols1=2.34-0.1 libsqlite3-0=3.29.0-2 libssl1.1=1.1.1d-1 libstdc++-9-dev=9.2.1-8 libstdc++6=9.2.1-8 libsub-override-perl=0.09-2 libsystemd0=242-7 libtinfo6=6.1+20190803-1 libtool=2.4.6-11 libtsan0=9.2.1-8 libubsan1=9.2.1-8 libuchardet0=0.0.6-3 libudev1=242-7 libunistring2=0.9.10-2 libuuid1=2.34-0.1 libxml2=2.9.4+dfsg1-7+b3 linux-libc-dev=5.2.17-1 login=1:4.7-2 lsb-base=11.1.0 m4=1.4.18-2 make=4.2.1-1.2 man-db=2.8.7-3 mawk=1.3.3-17+b3 mime-support=3.63 ncurses-base=6.1+20190803-1 ncurses-bin=6.1+20190803-1 patch=2.7.6-6 perl=5.28.1-6 perl-base=5.28.1-6 perl-modules-5.28=5.28.1-6 po-debconf=1.0.21 python-matplotlib-data=3.0.2-2 python3=3.7.5-1 python3-all=3.7.5-1 python3-cycler=0.10.0-1 python3-dateutil=2.7.3-3 python3-decorator=4.3.0-1.1 python3-distutils=3.7.5~rc1-1 python3-kiwisolver=1.0.1-2+b1 python3-lib2to3=3.7.5~rc1-1 python3-matplotlib=3.0.2-2+b1 python3-minimal=3.7.5-1 python3-numpy=1:1.16.5-1 python3-pkg-resources=41.2.0-1 python3-pyparsing=2.4.2-1 python3-scipy=1.2.2-7 python3-setuptools=41.2.0-1 python3-six=1.12.0-2 python3.7=3.7.5~rc1-1 python3.7-minimal=3.7.5~rc1-1 readline-common=8.0-3 sed=4.7-1 sensible-utils=0.0.12 sysvinit-utils=2.96~beta-3 tar=1.30+dfsg-6+b1 ttf-bitstream-vera=1.10-8 tzdata=2019c-3 util-linux=2.34-0.1 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-1+b1 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main
deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main
deb http://snapshot.notset.fr/archive/debian/20191004T084544Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d python-csb=1.2.5+dfsg-5 && mkdir -p /build/python-csb-twJ57r && dpkg-source --no-check -x /*.dsc /build/python-csb-twJ57r/python-csb-1.2.5+dfsg && chown -R builduser:builduser /build/python-csb-twJ57r" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/python-csb-twJ57r/python-csb-1.2.5+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1570104087" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/python-csb-twJ57r /tmp/python-csb-1.2.5+dfsg-532piz5aj bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20191004T084544Z unstable main
I: automatically chosen mode: root
I: chroot architecture amd64 is equal to the host's architecture
I: automatically chosen format: tar
I: using /tmp/mmdebstrap.LvAWMLBV6x as tempdir
I: running apt-get update...
I: downloading packages with apt...
I: extracting archives...
I: installing essential packages...
I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.LvAWMLBV6x
Reading package lists...
Building dependency tree...
util-linux is already the newest version (2.34-0.1).
The following NEW packages will be installed:
  fakeroot libfakeroot
0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded.
Need to get 132 kB of archives.
After this operation, 393 kB of additional disk space will be used.
Get:1 http://snapshot.notset.fr/archive/debian/20191004T084544Z unstable/main amd64 libfakeroot amd64 1.24-1 [45.7 kB]
Get:2 http://snapshot.notset.fr/archive/debian/20191004T084544Z unstable/main amd64 fakeroot amd64 1.24-1 [85.9 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 132 kB in 0s (535 kB/s)
Selecting previously unselected package libfakeroot:amd64.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 4474 files and directories currently installed.)
Preparing to unpack .../libfakeroot_1.24-1_amd64.deb ...
Unpacking libfakeroot:amd64 (1.24-1) ...
Selecting previously unselected package fakeroot.
Preparing to unpack .../fakeroot_1.24-1_amd64.deb ...
Unpacking fakeroot (1.24-1) ...
Setting up libfakeroot:amd64 (1.24-1) ...
Setting up fakeroot (1.24-1) ...
update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
Processing triggers for libc-bin (2.29-2) ...
I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/
I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main
deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main
deb http://snapshot.notset.fr/archive/debian/20191004T084544Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.LvAWMLBV6x
Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB]
Hit:2 http://snapshot.notset.fr/archive/debian/20191004T084544Z unstable InRelease
Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources
Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages
Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources
Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages
Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources
Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages
Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB]
Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB]
Fetched 22.6 MB in 22s (1040 kB/s)
Reading package lists...
I: installing remaining packages inside the chroot...
I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.LvAWMLBV6x
I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d python-csb=1.2.5+dfsg-5 && mkdir -p /build/python-csb-twJ57r && dpkg-source --no-check -x /*.dsc /build/python-csb-twJ57r/python-csb-1.2.5+dfsg && chown -R builduser:builduser /build/python-csb-twJ57r"' exec /tmp/mmdebstrap.LvAWMLBV6x
Reading package lists...
NOTICE: 'python-csb' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/python-csb.git
Please use:
git clone https://salsa.debian.org/med-team/python-csb.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 3012 kB of source archives.
Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main python-csb 1.2.5+dfsg-5 (dsc) [2250 B]
Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main python-csb 1.2.5+dfsg-5 (tar) [3000 kB]
Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main python-csb 1.2.5+dfsg-5 (diff) [9788 B]
Fetched 3012 kB in 2s (1208 kB/s)
Download complete and in download only mode
W: Download is performed unsandboxed as root as file 'python-csb_1.2.5+dfsg-5.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied)
dpkg-source: info: extracting python-csb in /build/python-csb-twJ57r/python-csb-1.2.5+dfsg
dpkg-source: info: unpacking python-csb_1.2.5+dfsg.orig.tar.gz
dpkg-source: info: unpacking python-csb_1.2.5+dfsg-5.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying exclude_online_tests.patch
dpkg-source: info: applying reproducible.patch
dpkg-source: info: applying fix_setup.patch
I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/python-csb-twJ57r/python-csb-1.2.5+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1570104087" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.LvAWMLBV6x
dpkg-buildpackage: info: source package python-csb
dpkg-buildpackage: info: source version 1.2.5+dfsg-5
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
 dpkg-source --before-build .
 fakeroot debian/rules clean
dh clean --with python3 --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:217: python3.7 setup.py clean 
Warning: 'classifiers' should be a list, got type 'tuple'
running clean
removing '/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build' (and everything under it)
'build/bdist.linux-amd64' does not exist -- can't clean it
'build/scripts-3.7' does not exist -- can't clean it
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules build-indep
dh build-indep --with python3 --buildsystem=pybuild
   dh_update_autotools_config -i -O--buildsystem=pybuild
   dh_autoreconf -i -O--buildsystem=pybuild
   dh_auto_configure -i -O--buildsystem=pybuild
I: pybuild base:217: python3.7 setup.py config 
Warning: 'classifiers' should be a list, got type 'tuple'
running config
   dh_auto_build -i -O--buildsystem=pybuild
I: pybuild base:217: /usr/bin/python3 setup.py build 
Warning: 'classifiers' should be a list, got type 'tuple'
running build
running build_py
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb
copying csb/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb
copying csb/build.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
copying csb/apps/embd.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
copying csb/apps/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
copying csb/apps/csfrag.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
copying csb/apps/helloworld.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
copying csb/apps/hhfrag.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
copying csb/apps/bfit.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
copying csb/apps/precision.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
copying csb/apps/buildhmm.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
copying csb/apps/bfite.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
copying csb/apps/promix.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
copying csb/apps/hhsearch.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics
copying csb/statistics/maxent.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics
copying csb/statistics/scalemixture.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics
copying csb/statistics/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics
copying csb/statistics/mixtures.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics
copying csb/statistics/ars.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics
copying csb/statistics/rand.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/core
copying csb/core/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/core
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/io
copying csb/io/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/io
copying csb/io/plots.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/io
copying csb/io/tsv.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/io
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test
copying csb/test/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test
copying csb/test/app.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statmech
copying csb/statmech/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statmech
copying csb/statmech/wham.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statmech
copying csb/statmech/ensembles.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statmech
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio
copying csb/bio/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/numeric
copying csb/numeric/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/numeric
copying csb/numeric/integrators.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/numeric
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers
copying csb/statistics/samplers/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/pdf
copying csb/statistics/pdf/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/pdf
copying csb/statistics/pdf/parameterized.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/pdf
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc
copying csb/statistics/samplers/mc/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc
copying csb/statistics/samplers/mc/neqsteppropagator.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc
copying csb/statistics/samplers/mc/singlechain.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc
copying csb/statistics/samplers/mc/multichain.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc
copying csb/statistics/samplers/mc/propagators.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases
copying csb/test/cases/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics
copying csb/test/cases/statistics/maxent.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics
copying csb/test/cases/statistics/scalemixture.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics
copying csb/test/cases/statistics/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics
copying csb/test/cases/statistics/mixtures.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics
copying csb/test/cases/statistics/ars.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics
copying csb/test/cases/statistics/rand.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/core
copying csb/test/cases/core/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/core
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io
copying csb/test/cases/io/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statmech
copying csb/test/cases/statmech/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statmech
copying csb/test/cases/statmech/wham.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statmech
copying csb/test/cases/statmech/ensembles.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statmech
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio
copying csb/test/cases/bio/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/numeric
copying csb/test/cases/numeric/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/numeric
copying csb/test/cases/numeric/integrators.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/numeric
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/samplers
copying csb/test/cases/statistics/samplers/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/samplers
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/pdf
copying csb/test/cases/statistics/pdf/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/pdf
copying csb/test/cases/statistics/pdf/parameterized.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/pdf
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/nmr
copying csb/test/cases/bio/nmr/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/nmr
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/structure
copying csb/test/cases/bio/structure/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/structure
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/utils
copying csb/test/cases/bio/utils/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/utils
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io
copying csb/test/cases/bio/io/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/fragments
copying csb/test/cases/bio/fragments/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/fragments
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/hmm
copying csb/test/cases/bio/hmm/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/hmm
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence
copying csb/test/cases/bio/sequence/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/whatif
copying csb/test/cases/bio/io/whatif/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/whatif
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/cs
copying csb/test/cases/bio/io/cs/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/cs
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/procheck
copying csb/test/cases/bio/io/procheck/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/procheck
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta
copying csb/test/cases/bio/io/fasta/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/clans
copying csb/test/cases/bio/io/clans/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/clans
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/hhpred
copying csb/test/cases/bio/io/hhpred/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/hhpred
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/wwpdb
copying csb/test/cases/bio/io/wwpdb/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/wwpdb
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/mrc
copying csb/test/cases/bio/io/mrc/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/mrc
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/noe
copying csb/test/cases/bio/io/noe/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/noe
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/alignment
copying csb/test/cases/bio/sequence/alignment/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/alignment
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/nmr
copying csb/bio/nmr/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/nmr
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/structure
copying csb/bio/structure/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/structure
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/utils
copying csb/bio/utils/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/utils
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/procheck.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/whatif.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/fasta.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/dssp.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/svg.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/clans.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/wwpdb.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/hhpred.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/cs.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/noe.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/vasco.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/mrc.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
copying csb/bio/io/psipred.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/fragments
copying csb/bio/fragments/rosetta.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/fragments
copying csb/bio/fragments/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/fragments
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/hmm
copying csb/bio/hmm/pseudocounts.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/hmm
copying csb/bio/hmm/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/hmm
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/sequence
copying csb/bio/sequence/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/sequence
copying csb/bio/sequence/alignment.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/sequence
running egg_info
creating csb.egg-info
writing csb.egg-info/PKG-INFO
writing dependency_links to csb.egg-info/dependency_links.txt
writing entry points to csb.egg-info/entry_points.txt
writing requirements to csb.egg-info/requires.txt
writing top-level names to csb.egg-info/top_level.txt
writing manifest file 'csb.egg-info/SOURCES.txt'
reading manifest file 'csb.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '*.*' under directory 'docs'
warning: no previously-included files matching '*.pickle' found under directory 'csb/test/data'
writing manifest file 'csb.egg-info/SOURCES.txt'
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/1C3W_10.mrc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/1d3z.legacy.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/1d3z.regular.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/1nz9.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/1nz9A.frags -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/2JZC.sum -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/2l01.v2.str -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/2l01.v3.str -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/3p1u.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/3shm_ca.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/ISL5.1.isl -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/Sparky.peaks -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/Xeasy1.peaks -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/Xeasy2.peaks -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/ake-xray-ensemble-ca.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/csb.tsv -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/d1b24a2.hhm -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/d1ea0a1.hhr -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/d1nz0a_.a3m -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/d1nz0a_.hhm -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/d1nz0a_.mfasta -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/d1nz0a_.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/mapping.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/mapping2.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/mapping3.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/modified.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/modified2.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/out.clans -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/pdbout.txt -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/standard.tsv -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/struct.ali.mfasta -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/test.fa -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/test.hhm -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
copying csb/test/data/test2.hhm -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/nmr/resources
copying csb/bio/nmr/resources/AtomConnectivity.xml -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/nmr/resources
copying csb/bio/nmr/resources/RandomCoil.Corrections.tsv -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/nmr/resources
copying csb/bio/nmr/resources/RandomCoil.Reference.tsv -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/nmr/resources
   debian/rules override_dh_auto_test
make[1]: Entering directory '/build/python-csb-twJ57r/python-csb-1.2.5+dfsg'
LC_ALL=C.UTF-8 dh_auto_test -- --test --system=custom \
	--test-args='set -e; \
                             cd {build_dir}; \
                             PYTHONPATH={build_dir} PYTHONWARNINGS=d {interpreter} csb/test/app.py --generated-resources /tmp --verbosity 2'
I: pybuild base:217: set -e; \
                             cd /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build; \
                             PYTHONPATH=/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build PYTHONWARNINGS=d python3.7 csb/test/app.py --generated-resources /tmp --verbosity 2
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/__init__.py:162: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses
  import imp
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/hhpred.py:210: DeprecationWarning: invalid escape sequence \d
  m = re.search('(\d+)\D+(\d+)', line).groups()
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/hhpred.py:260: DeprecationWarning: invalid escape sequence \s
  seq = re.sub('\s+', '', ''.join(lines[1:]))
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/hhpred.py:307: DeprecationWarning: invalid escape sequence \-
  pattern = re.compile('^[A-Z\-]\s[0-9]+\s+')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/structure/__init__.py:2129: DeprecationWarning: invalid escape sequence \s
  string = ''.join(re.split('\s+', string))
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/structure/__init__.py:2131: DeprecationWarning: invalid escape sequence \s
  conf_string = ''.join(re.split('\s+', conf_string))
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/sequence/__init__.py:566: DeprecationWarning: invalid escape sequence \w
  self._residues += re.sub('([^\w\-\.])+', '', string)
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/wwpdb.py:1222: DeprecationWarning: invalid escape sequence \d
  res = re.search("(\d+(?:\.\d+)?)\s+ANGSTROM", line)
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/__init__.py:355: ResourceWarning: unclosed file <_io.BufferedWriter name='/tmp/1nz9.full.pickle'>
  Pickle.dump(ensemble, open(os.path.join(self.generatedData, '1nz9.full.pickle'), 'wb'))
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/__init__.py:361: ResourceWarning: unclosed file <_io.BufferedWriter name='/tmp/1nz9.model1.pickle'>
  Pickle.dump(model1, open(os.path.join(self.generatedData, '1nz9.model1.pickle'), 'wb'))
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/__init__.py:347: DeprecationWarning: invalid escape sequence \s
  """
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io/__init__.py:482: DeprecationWarning: invalid escape sequence \w
  "([0-9a-zA-Z]([-.\w]*[0-9a-zA-Z])"]
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/whatif.py:32: DeprecationWarning: invalid escape sequence \s
  re_ramachandran = re.compile('Ramachandran\s*Z-score\s*:\s*([0-9.Ee-]+)')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/whatif.py:33: DeprecationWarning: invalid escape sequence \s
  re_1st = re.compile('1st\s*generation\s*packing\s*quality\s*:\s*([0-9.Ee-]+)')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/whatif.py:34: DeprecationWarning: invalid escape sequence \s
  re_2nd = re.compile('2nd\s*generation\s*packing\s*quality\s*:\s*([0-9.Ee-]+)')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/whatif.py:35: DeprecationWarning: invalid escape sequence \s
  re_backbone = re.compile('Backbone\s*conformation\s*Z-score\s*:\s*([0-9.Ee-]+)')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/whatif.py:36: DeprecationWarning: invalid escape sequence \S
  re_rotamer = re.compile('chi-1\S*chi-2\s*rotamer\s*normality\s*:\s*([0-9.Ee-]+)')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/procheck.py:31: DeprecationWarning: invalid escape sequence \s
  input_file_name = re.compile('>>>-----.*?\n.*?\n\s*\|\s*(\S+)\s+')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/procheck.py:32: DeprecationWarning: invalid escape sequence \d
  residues = re.compile('(\d+)\s*residues\s\|')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/procheck.py:33: DeprecationWarning: invalid escape sequence \s
  ramachandran_plot = re.compile('Ramachandran\splot:\s*(\d+\.\d+)' +
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/procheck.py:34: DeprecationWarning: invalid escape sequence \s
  '%\s*core\s*(\d+\.\d+)%\s*allow\s*(\d+\.\d+)' +
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/procheck.py:35: DeprecationWarning: invalid escape sequence \s
  '%\s*gener\s*(\d+\.\d+)%\s*disall')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/procheck.py:36: DeprecationWarning: invalid escape sequence \s
  labelled_all = re.compile('Ramachandrans:\s*(\d+)\s*.*?out\sof\s*(\d+)')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/procheck.py:37: DeprecationWarning: invalid escape sequence \s
  labelled_chi = re.compile('Chi1-chi2\splots:\s*(\d+)\s*.*?out\sof\s*(\d+)')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/procheck.py:38: DeprecationWarning: invalid escape sequence \s
  bad_contacts = re.compile('Bad\scontacts:\s*(\d+)')
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/procheck.py:39: DeprecationWarning: invalid escape sequence \s
  g_factors = re.compile('G-factors\s*Dihedrals:\s*([0-9-+.]+)' +
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/procheck.py:40: DeprecationWarning: invalid escape sequence \s
  '\s*Covalent:\s*([0-9-+.]+)\s*Overall:\s*([0-9-+.]+)')
testMaxent (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/maxe.TestMaxent) ... skipped 'slow'
testEnsemble (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/scalemixture.TestScaleMixture) ... ok
testGamma (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/scalemixture.TestScaleMixture) ... ok
testGammaMAP (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/scalemixture.TestScaleMixture) ... ok
testInvGamma (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/scalemixture.TestScaleMixture) ... ok
testInvGammaMAP (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/scalemixture.TestScaleMixture) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/scalemixture.TestScaleMixture) ... ok
testRandom (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/scalemixture.TestScaleMixture) ... ok
testAutorcorrelation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics.TestStatFunction) ... ok
testCircmean (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics.TestStatFunction) ... ok
testCircvar (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics.TestStatFunction) ... ok
testCumulative (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics.TestStatFunction) ... ok
testEntropy (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics.TestStatFunction) ... ok
testKurtosis (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics.TestStatFunction) ... ok
testSkewness (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics.TestStatFunction) ... ok
testConformerMixture (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/mixtures.TestMixtures) ... ok
testSegmentMixture (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/mixtures.TestMixtures) ... ok
testNormal (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/ars.TestARS) ... ok
testSampleFromHistogram (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/rand.TestRand) ... ok
testTruncatedGamma (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/rand.TestRand) ... ok
testTruncatedNormal (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/rand.TestRand) ... ok
testAcceptSwap (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestAbstractExchangeMC) ... ok
testSwap (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestAbstractExchangeMC) ... ok
testAcceptProposal (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestAbstractSingleChainMC) ... ok
testAcceptanceRate (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestAbstractSingleChainMC) ... ok
testEnergy (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestAbstractSingleChainMC) ... ok
testLastMoveAccepted (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestAbstractSingleChainMC) ... ok
testSample (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestAbstractSingleChainMC) ... ok
testTemperature (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestAbstractSingleChainMC) ... ok
testUpdateStatistics (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestAbstractSingleChainMC) ... ok
testCalcPacc (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestHMCSampler) ... ok
testHamiltonian (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestHMCSampler) ... ok
testPropose (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestHMCSampler) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/samplers/__init__.py:1019: RuntimeWarning: covariance is not symmetric positive-semidefinite.
  cov=self._mass_matrix)
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc/__init__.py:320: RuntimeWarning: covariance is not symmetric positive-semidefinite.
  cov=covariance_matrix)
ok
testHMCPropagator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestMCPropagators) ... ok
testHMCPropagatorMM (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestMCPropagators) ... ok
testNCMCPropagator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestMCPropagators) ... skipped 'Takes quite a long time to run.'
testRWMCPropagator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestMCPropagators) ... ok
testHMCStepRENS (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestMultichain) ... ok
testMDRENS (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestMultichain) ... ok
testReplicaExchangeMC (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestMultichain) ... skipped 'Takes some time, rendered optional by a unit test.'
testThermostattedMDRens (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestMultichain) ... ok
testThermostattedMDRensMM (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestMultichain) ... ok
testProposeWithMomentum (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestNCMCSampler) ... ok
testProposeWithoutMomentum (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestNCMCSampler) ... ok
testHMCPropagation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestNeqsteppropagator) ... ok
testNonequilibriumStepPropagator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestNeqsteppropagator) ... ok
testPlainMDPropagation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestNeqsteppropagator) ... ok
testReducedHamiltonian (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestNeqsteppropagator) ... ok
testReducedHamiltonianPerturbation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestNeqsteppropagator) ... ok
testStep (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestNeqsteppropagator) ... ok
testCalcPaccSwap (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestReplicaExchangeMC) ... ok
testProposeSwap (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestReplicaExchangeMC) ... ok
testFiveReplicas (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestReplicaHistory) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/samplers/__init__.py:867: DeprecationWarning: elementwise comparison failed; this will raise an error in the future.
  for t2 in trajs2])
ok
testFiveReplicasOffset (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestReplicaHistory) ... ok
testFourReplicas (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestReplicaHistory) ... ok
testTwoReplicas (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/samplers.TestReplicaHistory) ... ok
testParameterValidation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestDensityRegressions) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestDirichlet) ... ok
testParameterEstimation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestDirichlet) ... ok
testParameters (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestDirichlet) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGamma) ... ok
testParameterEstimation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGamma) ... ok
testParameters (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGamma) ... ok
testRandom (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGamma) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGeneralizedInverseGaussian) ... ok
testParameters (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGeneralizedInverseGaussian) ... ok
testRandom (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGeneralizedInverseGaussian) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGeneralizedNormal) ... ok
testParameterEstimation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGeneralizedNormal) ... ok
testParameters (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGeneralizedNormal) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGumbelMaximum) ... ok
testParameterEstimation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGumbelMaximum) ... ok
testParameters (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGumbelMaximum) ... ok
testRandom (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGumbelMaximum) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGumbelMinimum) ... ok
testParameterEstimation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGumbelMinimum) ... ok
testParameters (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGumbelMinimum) ... ok
testRandom (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestGumbelMinimum) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestInverseGamma) ... ok
testParameters (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestInverseGamma) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestInverseGaussian) ... ok
testParameterEstimation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestInverseGaussian) ... ok
testParameters (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestInverseGaussian) ... ok
testRandom (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestInverseGaussian) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestLaplace) ... ok
testParameterEstimation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestLaplace) ... ok
testParameters (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestLaplace) ... ok
testRandom (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestLaplace) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestMultivariateGaussian) ... ok
testParameterEstimation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestMultivariateGaussian) ... ok
testParameters (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestMultivariateGaussian) ... ok
testLogProb (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestNormal) ... ok
testParameterEstimation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestNormal) ... ok
testParameters (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestNormal) ... ok
testRandom (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf.TestNormal) ... ok
testSet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestAbstractGenericParameter) ... ok
testValue (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestAbstractGenericParameter) ... ok
testBindTo (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestNonVirtualParameter) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestNonVirtualParameter) ... ok
testIsVirtual (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestNonVirtualParameter) ... ok
testSet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestNonVirtualParameter) ... ok
testBindTo (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestParameter) ... ok
testConstrucor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestParameter) ... ok
testFindBaseParameter (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestParameter) ... ok
testIsVirtual (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestParameter) ... ok
testName (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestParameter) ... ok
testSet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestParameter) ... ok
testValue (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestParameter) ... ok
testAssignment (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestParameterizedDensity) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestParameterizedDensity) ... ok
testParameterChaining (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestParameterizedDensity) ... ok
testProperties (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statistics/pdf/parameterized.TestParameterizedDensity) ... ok
testGetitem (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestAbstractContainer) ... ok
testIterator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestAbstractContainer) ... ok
testGetitem (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestAbstractNIContainer) ... ok
testIterator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestAbstractNIContainer) ... ok
testAppend (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestCollectionContainer) ... ok
testBool (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestCollectionContainer) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestCollectionContainer) ... ok
testGetitem (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestCollectionContainer) ... ok
testIndices (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestCollectionContainer) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestCollectionContainer) ... ok
testUpdate (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestCollectionContainer) ... ok
runTest (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestDeepCopy) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/core/__init__.py:21: DeprecationWarning: Please use assertNotEqual instead.
  self.assertNotEquals(id(obj), id(copy))
ok
testAppend (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestDictionaryContainer) ... ok
testBool (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestDictionaryContainer) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestDictionaryContainer) ... ok
testGetitem (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestDictionaryContainer) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestDictionaryContainer) ... ok
testRemove (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestDictionaryContainer) ... ok
testSet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestDictionaryContainer) ... ok
testUpdate (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestDictionaryContainer) ... ok
testComparison (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testCreate (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testInOperator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testIsMember (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testIterator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testMembers (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testMutability (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testNames (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testParseName (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testParseValue (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testRepr (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testSerialization (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testStr (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
testValues (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestEnum) ... ok
runTest (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestIterable) ... ok
runTest (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/core.TestOrderedDict) ... ok
testWrite (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestAutoFlushStream) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io/__init__.py:199: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpu6ikwyoq' mode='r' encoding='UTF-8'>
  content = open(self.temp.name).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testGzip (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestDumpLoad) ... ok
testGzipFail (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestDumpLoad) ... ok
testLock (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestDumpLoad) ... ok
testLockGzip (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestDumpLoad) ... ok
testRecusionLimit (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestDumpLoad) ... ok
testSimple (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestDumpLoad) ... ok
testAllMarkers (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestEntryReader) ... ok
testDel (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestEntryReader) ... ok
testRead (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestEntryReader) ... ok
testReadAll (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestEntryReader) ... ok
testStartMarker (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestEntryReader) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestEntryWriter) ... ok
testContextManager (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestEntryWriter) ... ok
testWrite (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestEntryWriter) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io/__init__.py:439: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpt_t08xq5' mode='r' encoding='UTF-8'>
  self.assertEqual(open(temp.name).read(), 'D')
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testWriteAll (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestEntryWriter) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io/__init__.py:459: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpgbhgwyv_' mode='r' encoding='UTF-8'>
  self.assertEqual(open(temp.name).read(), 'A/B/C/')
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testWriteLine (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestEntryWriter) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io/__init__.py:449: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp9kh_sfxw' mode='r' encoding='UTF-8'>
  self.assertEqual(open(temp.name).read(), 'D' + csb.io.NEWLINE)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testClose (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestMemoryStream) ... ok
testContextManager (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestMemoryStream) ... ok
testFlush (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestMemoryStream) ... ok
testWrite (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestMemoryStream) ... ok
testExitCode (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestShell) ... ok
testSTDERR (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestShell) ... ok
testSTDOUT (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestShell) ... ok
testArrayCompatibility (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTable) ... ok
testDataAccess (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTable) ... ok
testDump (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTable) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io/__init__.py:124: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/csb.tsv' mode='r' encoding='UTF-8'>
  self.assertEqual(open(self.tsv).read(), open(dump.name).read())
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io/__init__.py:124: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp1a5om6nf' mode='r' encoding='UTF-8'>
  self.assertEqual(open(self.tsv).read(), open(dump.name).read())
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testInsert (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTable) ... ok
testIteration (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTable) ... ok
testSQLDataAccess (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTable) ... ok
testScalar (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTable) ... ok
testSelect (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTable) ... ok
testUpdate (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTable) ... ok
testWhere (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTable) ... ok
testAutoCleanup (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTempFile) ... ok
testCallForwarding (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTempFile) ... ok
testClose (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTempFile) ... ok
testContextManager (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTempFile) ... ok
testMultipleHandles (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTempFile) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io/__init__.py:287: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpzqew30mc' mode='r' encoding='UTF-8'>
  self.assertEqual(data, open(temp.name).read())
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testAutoCleanup (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTempFolder) ... ok
testClose (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTempFolder) ... ok
testContextManager (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/io.TestTempFolder) ... ok
testNonparametricWHAM (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statmech/wham.TestWHAM) ... ok
testWHAM (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statmech/wham.TestWHAM) ... ok
testBoltzmann (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statmech/ensembles.TestEnergy) ... ok
testComposite (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statmech/ensembles.TestEnergy) ... ok
testTsallis (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/statmech/ensembles.TestEnergy) ... ok
testConnected (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestAtomConnectivity) ... ok
testConnectedAtoms (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestAtomConnectivity) ... ok
testContains (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestAtomConnectivity) ... ok
testFactory (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestAtomConnectivity) ... ok
testGetAtoms (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestAtomConnectivity) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestChemShiftInfo) ... ok
testLabel (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestChemShiftInfo) ... ok
testNegative (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestChemShiftScoringModel) ... ok
testPositive (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestChemShiftScoringModel) ... ok
testScore (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestChemShiftScoringModel) ... ok
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/__init__.py:297: ResourceWarning: unclosed file <_io.BufferedReader name='/tmp/1nz9.model1.pickle'>
  return csb.io.Pickle.load(open(file, 'rb'))
ResourceWarning: Enable tracemalloc to get the object allocation traceback
testAtomContacts (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testAtoms (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testBuild (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testChain (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testCompare (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testConnect (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testConnected (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testContacts (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testContains (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testCutoff (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testIterator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testPosition (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testResidueContacts (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestContactMap) ... ok
testBuild (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestLabel) ... ok
testFromAtom (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestLabel) ... ok
testFromShift (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestLabel) ... ok
testFromString (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestLabel) ... ok
testGetAtom (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestLabel) ... ok
testMatch (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestLabel) ... ok
testParse (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestLabel) ... ok
testConnectedDimensions (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOEPeak) ... ok
testElement (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOEPeak) ... ok
testGet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOEPeak) ... ok
testHasConnectedDimensions (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOEPeak) ... ok
testHasElement (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOEPeak) ... ok
testIntensity (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOEPeak) ... ok
testNumDimensions (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOEPeak) ... ok
testConnect (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testConnectedDimensions (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testDimensions (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testElement (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testGetitem (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testHasConnectedDimensions (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testHasElement (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testIterator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testLen (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testMaxIntensity (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testMinIntensity (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testNumDimensions (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testNumProtonDimensions (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testProtonDimensions (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestNOESpectrum) ... ok
testFactory (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestRandomCoil) ... ok
testSecondaryShift (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestRandomCoil) ... ok
testSimpleSecondaryShift (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/nmr.TestRandomCoil) ... ok
testAppendAtom (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.ChainRegressions) ... ok
testApplyTransformation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.ChainRegressions) ... ok
testClone (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.ChainRegressions) ... ok
testListCoordinates (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.ChainRegressions) ... skipped 'may fail on slower machines'
testApplyTransformation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestAbstractEntity) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/__init__.py:297: ResourceWarning: unclosed file <_io.BufferedReader name='/tmp/1nz9.full.pickle'>
  return csb.io.Pickle.load(open(file, 'rb'))
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testComponents (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestAbstractEntity) ... ok
testItems (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestAbstractEntity) ... ok
testListCoordinates (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestAbstractEntity) ... ok
testElement (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestAtom) ... ok
testName (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestAtom) ... ok
testResidue (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestAtom) ... ok
testSerialNumber (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestAtom) ... ok
testSorting (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestAtom) ... ok
testVector (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestAtom) ... ok
testAccession (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testAlign (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testAlphabet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testAppend (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testClone (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testComputeTorsion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testContains (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testEntryID (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testFind (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testFromSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testGetitem (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testHeader (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testId (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testListCoordinates (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testRMSD (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testSecStructure (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testSubregion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testSuperimpose (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testTMScore (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testTMSuperimpose (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testType (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestChain) ... ok
testAppend (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestDisorderedAtom) ... ok
testElement (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestDisorderedAtom) ... ok
testFind (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestDisorderedAtom) ... ok
testIteration (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestDisorderedAtom) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestDisorderedAtom) ... ok
testName (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestDisorderedAtom) ... ok
testResidue (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestDisorderedAtom) ... ok
testSerialNumber (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestDisorderedAtom) ... ok
testSorting (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestDisorderedAtom) ... ok
testVector (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestDisorderedAtom) ... ok
testAppend (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestEnsemble) ... ok
testComponents (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestEnsemble) ... ok
testFirstModel (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestEnsemble) ... ok
testGetitem (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestEnsemble) ... ok
testItems (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestEnsemble) ... ok
testToPDB (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestEnsemble) ... ok
testAppend (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testFactory (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testGetitem (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testHasStructure (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testId (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testInsertionCode (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testIsModified (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testItems (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testLabel (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testSequenceNumber (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testTorsion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testType (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestResidue) ... ok
testAccession (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestStructure) ... ok
testAppend (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestStructure) ... ok
testFirstChain (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestStructure) ... ok
testFromChain (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestStructure) ... ok
testGetitem (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestStructure) ... ok
testItems (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestStructure) ... ok
testRemove (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestStructure) ... ok
testToFASTA (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestStructure) ... ok
testToPDB (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestStructure) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/structure/__init__.py:353: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpj55o1kvu' mode='r' encoding='UTF-8'>
  self.assertEqual(pdbraw, open(tmp.name).read())
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/structure/__init__.py:358: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpbeg78vmh' mode='r' encoding='UTF-8'>
  self.assertEqual(pdbraw, open(tmp.name).read())
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testBool (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestTorsionAngles) ... ok
testConversion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestTorsionAngles) ... ok
testRMSD (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/structure.TestTorsionAngles) ... ok
testRmsdMirrorImage (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.Regressions) ... ok
testTMSuperimpose (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.Regressions) ... ok
testCenterOfMass (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testDeg (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testDistance (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testDistanceMatrix (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testFindPairs (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testFit (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testFitWellordered (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testInertiaTensor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testRad (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testRadiusOfGyration (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testRmsd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testRmsdCur (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testScaleAndFit (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testSecondMoments (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testTmScore (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testTmSuperimpose (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testTorsionRmsd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testWFit (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testWrmsd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/utils.TestUtils) ... ok
testParse (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/whatif.TestWhatCheckParser) ... ok
testCreate (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/cs.TestChemShift3Reader) ... ok
testGuess (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/cs.TestChemShift3Reader) ... ok
testReadFile (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/cs.TestChemShift3Reader) ... ok
testReadShifts (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/cs.TestChemShift3Reader) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/cs/__init__.py:49: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/2l01.v3.str' mode='r' encoding='UTF-8'>
  content = open(self.file).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testCreate (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/cs.TestChemShiftReader) ... ok
testGuess (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/cs.TestChemShiftReader) ... ok
testReadFile (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/cs.TestChemShiftReader) ... ok
testReadShifts (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/cs.TestChemShiftReader) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/cs/__init__.py:49: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/2l01.v2.str' mode='r' encoding='UTF-8'>
  content = open(self.file).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testParse (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/procheck.TestProcheckParser) ... ok
testAddAlignment (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestA3MOutputBuilder) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta/__init__.py:249: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpencqt8lx' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.alignment_string)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testAddSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestA3MOutputBuilder) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta/__init__.py:239: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpfl6h0np7' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.sequence_string)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testA3mToFasta (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestCrossAlignmentBuilding) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta/__init__.py:324: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpz0o3pvxj' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), 'A-CD\nAB-D')
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testFastaToA3m (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestCrossAlignmentBuilding) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta/__init__.py:314: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp37js7ymg' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), 'ACD\nAb-D')
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testAddAlignment (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestFASTAOutputBuilder) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta/__init__.py:249: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmppxackggt' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.alignment_string)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testAddSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestFASTAOutputBuilder) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta/__init__.py:239: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpfuv531am' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.sequence_string)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testReadA3M (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestNonStrictAlignmentReader) ... ok
testReadFASTA (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestNonStrictAlignmentReader) ... ok
testStrict (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestNonStrictAlignmentReader) ... ok
testCreate (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestOutputBuilder) ... ok
testParseString (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestPDBSequenceParser) ... ok
testReadJunk (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestPDBSequenceParser) ... ok
testReadNucleicSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestPDBSequenceParser) ... ok
testReadProteinSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestPDBSequenceParser) ... ok
testAddAlignment (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestPIROutputBuilder) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta/__init__.py:249: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp7xwazly0' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.alignment_string)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testAddSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestPIROutputBuilder) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta/__init__.py:239: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp2p6eibc3' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.sequence_string)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testReadA3M (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestSequenceAlignmentReader) ... ok
testReadFASTA (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestSequenceAlignmentReader) ... ok
testParseFile (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestSequenceParser) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta/__init__.py:19: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/test.fa' mode='r' encoding='UTF-8'>
  self.data = open(self.file).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testParseString (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestSequenceParser) ... ok
testRead (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestSequenceParser) ... ok
testMakeAlignment (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestStructureAlignmentFactory) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/wwpdb.py:326: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/3p1u.pdb' mode='r' encoding='UTF-8'>
  break
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/wwpdb.py:326: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/1d3z.regular.pdb' mode='r' encoding='UTF-8'>
  break
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testMakeEntry (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/fasta.TestStructureAlignmentFactory) ... ok
testClansEntryAddingAndSorting (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClans) ... ok
testClansEntrySortingWithCustomKeyFunction (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClans) ... ok
testClansInit (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClans) ... ok
testDuplicateEntryError (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClans) ... ok
testGetEntry (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClans) ... ok
testColorInit (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansColor) ... ok
testColorSetter (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansColor) ... ok
testParseClansColorWithCorrectInput (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansColor) ... ok
testParseClansColorWithWrongInput (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansColor) ... ok
testToClansColor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansColor) ... ok
testWrittenIsIdenticalToOriginal (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansFileWriter) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/clans.py:376: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/out.clans' mode='r' encoding='UTF-8'>
  self._clans_instance.filename)).read().split('\n', 1)[1]
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testForbiddenAssignments (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansParams) ... ok
testInstatiation (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansParams) ... ok
testUnknownParamFail (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansParams) ... ok
testParseFile (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansParser) ... ok
testPrematureGetter (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansParser) ... ok
testAddingAndRemovingSeqgroups (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansSeqgroup) ... ok
testAddingClansEntries (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansSeqgroup) ... ok
testAppendingSeqgroupsFromOtherInstance (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansSeqgroup) ... ok
testInit (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansSeqgroup) ... ok
testRemovingClansEntries (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/clans.TestClansSeqgroup) ... ok
testParseFile (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/hhpred.TestHHOutputParser) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/hhpred/__init__.py:166: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/d1ea0a1.hhr' mode='r' encoding='UTF-8'>
  content = open(filename).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testParseString (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/hhpred.TestHHOutputParser) ... ok
testLargeHitlist (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/hhpred.TestHHOutputRegressions) ... ok
testFormatStructure (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/hhpred.TestHHProfileParser) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/wwpdb.py:323: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/d1nz0a_.pdb' mode='r' encoding='UTF-8'>
  for line in open(structure_file):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/wwpdb.py:326: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp3mt5umnc' mode='r' encoding='UTF-8'>
  break
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testParseLogScales (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/hhpred.TestHHProfileParser) ... ok
testParseProbability (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/hhpred.TestHHProfileParser) ... ok
testParseRedundantA3M (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/hhpred.TestHHProfileRegressions) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/hhpred/__init__.py:48: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpnf68jk9a' mode='r' encoding='UTF-8'>
  generated = open(tmp.name).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testCommaSplitting (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestBiomoleculeRegressions) ... ok
testMap (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestCombinedResidueMapper) ... ok
testModifiedResidueMapping (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestCombinedResidueMapper) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/wwpdb.py:326: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/modified.pdb' mode='r' encoding='UTF-8'>
  break
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testAdd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestCustomProvider) ... ok
testFind (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestCustomProvider) ... ok
testGet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestCustomProvider) ... ok
testRemove (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestCustomProvider) ... ok
testAccession (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestDegenerateID) ... ok
testChain (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestDegenerateID) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestDegenerateID) ... ok
testEntryID (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestDegenerateID) ... ok
testFormat (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestDegenerateID) ... ok
testFactory (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestEntryID) ... ok
testMap (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestFastResidueMapper) ... ok
testModifiedResidueMapping (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestFastResidueMapper) ... ok
testAdd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestFileSystemProvider) ... ok
testFind (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestFileSystemProvider) ... ok
testGet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestFileSystemProvider) ... ok
testRemove (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestFileSystemProvider) ... ok
runTest (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestFind) ... ok
testFileName (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestLegacyStructureParser) ... ok
testGuessSequenceType (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestLegacyStructureParser) ... ok
testModels (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestLegacyStructureParser) ... ok
testParseBiomolecule (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestLegacyStructureParser) ... ok
testParseHetMolecules (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestLegacyStructureParser) ... ok
testParseModels (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestLegacyStructureParser) ... ok
testParseResidue (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestLegacyStructureParser) ... ok
testParseResidueSafe (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestLegacyStructureParser) ... ok
testParseStructure (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestLegacyStructureParser) ... ok
testHetMapping (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestMappingRegressions) ... ok
testNonStandardResidueMapping (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestMappingRegressions) ... ok
testCombinedMapping (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRegularStructureParser) ... ok
testFastMapping (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRegularStructureParser) ... ok
testFileName (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRegularStructureParser) ... ok
testGuessSequenceType (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRegularStructureParser) ... ok
testMapper (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRegularStructureParser) ... ok
testModels (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRegularStructureParser) ... ok
testParseModels (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRegularStructureParser) ... ok
testParseResidue (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRegularStructureParser) ... ok
testParseResidueSafe (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRegularStructureParser) ... ok
testParseStructure (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRegularStructureParser) ... ok
testRobustMapping (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRegularStructureParser) ... ok
testMap (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRobustResidueMapper) ... ok
testModifiedResidueMapping (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestRobustResidueMapper) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/wwpdb.py:326: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/modified2.pdb' mode='r' encoding='UTF-8'>
  break
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testSecStructureParsing (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestSecStructureRegressions) ... ok
testAccession (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestSeqResID) ... ok
testChain (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestSeqResID) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestSeqResID) ... ok
testEntryID (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestSeqResID) ... ok
testFormat (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestSeqResID) ... ok
testAccession (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestStandardID) ... ok
testChain (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestStandardID) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestStandardID) ... ok
testEntryID (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestStandardID) ... ok
testFormat (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestStandardID) ... ok
testFactory (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/wwpdb.TestStructureParser) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/wwpdb.py:323: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/1d3z.legacy.pdb' mode='r' encoding='UTF-8'>
  for line in open(structure_file):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testRead (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/mrc.TestDensityMapReader) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/mrc.py:248: DeprecationWarning: The binary mode of fromstring is deprecated, as it behaves surprisingly on unicode inputs. Use frombuffer instead
  array = numpy.fromstring(map_data, numpy.float32, count)
ok
testReadHeader (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/mrc.TestDensityMapReader) ... ok
testReadRawHeader (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/mrc.TestDensityMapReader) ... ok
testReconstructHeader (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/mrc.TestDensityMapWriter) ... ok
testWriteDensity (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/mrc.TestDensityMapWriter) ... ok
testRead (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/noe.TestSparkyPeakListReader) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/noe/__init__.py:22: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/Sparky.peaks' mode='r' encoding='UTF-8'>
  content = open(self.file).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testReadAll (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/noe.TestSparkyPeakListReader) ... ok
testReadFile (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/noe.TestSparkyPeakListReader) ... ok
testBuild (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/noe.TestXeasyFileBuilder) ... ok
testRead (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/noe.TestXeasyPeakListReader) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/noe/__init__.py:78: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/Xeasy1.peaks' mode='r' encoding='UTF-8'>
  content = open(self.file).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testRead (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/io/noe.TestXeasyPeakListReader2) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/noe/__init__.py:78: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/Xeasy2.peaks' mode='r' encoding='UTF-8'>
  content = open(self.file).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testAnchoredAround (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testBackbone (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testBackboneAt (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testEnd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testOverlap (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testQEnd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testQStart (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testRMSD (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testRMSDTo (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testSourceID (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testStart (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testTorsion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testTorsionAt (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestAssignment) ... ok
testCount (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestFragmentCluster) ... ok
testMean (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestFragmentCluster) ... ok
testShrink (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestFragmentCluster) ... ok
testShrinkOne (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestFragmentCluster) ... ok
testAccession (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testEnd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testFomObject (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testQEnd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testQStart (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testResidues (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testScore (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testSourceID (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testStart (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testSubregion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testTorsion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragment) ... ok
testAt (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragmentMap) ... ok
testComplement (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragmentMap) ... ok
testDump (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragmentMap) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/fragments/__init__.py:562: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpp1x_ev7e' mode='r' encoding='UTF-8'>
  new = open(tmp.name).read().rstrip()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testFromSource (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragmentMap) ... ok
testIndexer (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragmentMap) ... ok
testMarkUnconfident (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragmentMap) ... ok
testRead (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragmentMap) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/fragments/rosetta.py:457: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/1nz9A.frags' mode='r' encoding='UTF-8'>
  for line in open(file):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testSize (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragmentMap) ... ok
testSort (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragmentMap) ... ok
testSources (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragmentMap) ... ok
testStartingAt (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragmentMap) ... ok
testMakeChopped (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragsetfactory) ... ok
testMakeCombined (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragsetfactory) ... ok
testMakeFiltered (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragsetfactory) ... ok
testMakeFragset (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragsetfactory) ... ok
testMix (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestRosettaFragsetfactory) ... ok
testAccession (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTarget) ... ok
testAssign (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTarget) ... ok
testEntryID (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTarget) ... ok
testFilter (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTarget) ... ok
testFromProfile (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTarget) ... ok
testFromSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTarget) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTarget) ... ok
testMatches (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTarget) ... ok
testResidues (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTarget) ... ok
testSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTarget) ... ok
testAssign (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTargetResidue) ... ok
testAssignments (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTargetResidue) ... ok
testClosest (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTargetResidue) ... ok
testFilter (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTargetResidue) ... ok
testLongest (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTargetResidue) ... ok
testNative (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTargetResidue) ... ok
testPrecision (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTargetResidue) ... ok
testType (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTargetResidue) ... ok
testCompute (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTorsionAnglePredictor) ... ok
testComputeSingle (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTorsionAnglePredictor) ... ok
testFlatTorsionMap (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTorsionAnglePredictor) ... ok
testGetAngles (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTorsionAnglePredictor) ... ok
testTarget (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTorsionAnglePredictor) ... ok
testThreshold (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/fragments.TestTorsionAnglePredictor) ... ok
testAppend (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHMMLayer) ... ok
testIndexer (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHMMLayer) ... ok
testNeff (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHMMLayer) ... ok
testRank (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHMMLayer) ... ok
testResidue (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHMMLayer) ... ok
testAlignment (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHit) ... ok
testEquals (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHit) ... ok
testIncludes (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHit) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHit) ... ok
testSurpasses (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHit) ... ok
testIterator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHitList) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHitList) ... ok
testSort (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestHitList) ... ok
testAllLayers (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testChain (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testConvertScores (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testEmissionSimilarity (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testEnd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testID (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testLayers (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testName (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testScoreUnits (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testSegment (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testStart (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testStartInsertion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testStructure (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testSubregion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testToHMM (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMM) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMMSegment) ... ok
testToHMM (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestProfileHMMSegment) ... ok
runTest (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestPseudocountBuilder) ... ok
testBackground (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestState) ... ok
testEmission (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestState) ... ok
testSilent (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestState) ... ok
testTransitions (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestState) ... ok
testType (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/hmm.TestState) ... ok
testFormat (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignment) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py:312: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/d1nz0a_.a3m' mode='r' encoding='UTF-8'>
  self.a3m = open(self.file).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py:346: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/d1nz0a_.mfasta' mode='r' encoding='UTF-8'>
  ref = open(self.config.getTestFile('d1nz0a_.mfasta')).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testHMMSubregion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignment) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py:358: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/d1nz0a_.mfasta' mode='r' encoding='UTF-8'>
  ref = open(self.config.getTestFile('d1nz0a_.mfasta')).read()
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testInsertionAt (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignment) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignment) ... ok
testMatches (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignment) ... ok
testRows (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignment) ... ok
testSize (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignment) ... ok
testToString (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignment) ... ok
testAdd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testColumns (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testFormat (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testGapAt (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testIndexer (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testRowColumns (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testRowMap (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testRowResidues (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testRows (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testSize (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testSubregion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestA3MAlignmentSimple) ... ok
testAlphabet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testDump (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py:98: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpr_o2fvq6' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.data)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py:104: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp4h1efvlt' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.data)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testExtract (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testHeader (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testId (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testIndexeres (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testIterator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testStrip (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testSubregion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testToString (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testType (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestChainSequence) ... ok
testAlphabet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testDump (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py:98: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp8dknaxx7' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.data)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py:104: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpuit4b_z_' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.data)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testExtract (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testHeader (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testId (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testIndexeres (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testIterator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testStrip (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testSubregion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testToString (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testType (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestRichSequence) ... ok
testAlphabet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testDump (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py:98: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpw4_wuw61' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.data)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py:104: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmps783vkkr' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.data)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testExtract (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testHeader (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testId (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testIndexeres (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testIterator (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testSequence (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testStrip (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testSubregion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testToString (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testType (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequence) ... ok
testAdd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testColumns (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testFormat (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testGapAt (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testIndexer (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testRowColumns (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testRowMap (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testRowResidues (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testRows (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testSize (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testSubregion (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceAlignment) ... ok
testToFASTA (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence.TestSequenceCollection) ... /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py:151: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpf7ettaqn' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.data)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py:157: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpnkpg1lvu' mode='r' encoding='UTF-8'>
  self.assertEqual(open(tmp.name).read().strip(), self.data)
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
testAlignment (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testConstructor (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testEnd (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testGaps (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testIdenticals (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testIdentity (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testIsEmpty (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testLength (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testQend (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testQstart (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testQuery (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testScore (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testStart (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testStr (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testSubject (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestAlignmentResult) ... ok
testAlign (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestGlobalAlignmentAlgorithm) ... ok
testEmptyAlignment (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestGlobalAlignmentAlgorithm) ... ok
testScore (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestIdentityMatrix) ... ok
testAlign (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestLocalAlignmentAlgorithm) ... ok
testEmptyAlignment (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestLocalAlignmentAlgorithm) ... ok
testScore (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/bio/sequence/alignment.TestSimilarityMatrix) ... ok
testCaching (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.InvertibleMatrixTest) ... ok
testDiagonalTweak (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.InvertibleMatrixTest) ... skipped 'machine-specific'
testUnityMultipleTweak (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.InvertibleMatrixTest) ... skipped 'machine-specific'
testDihedralAngles (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.MathRegressions) ... ok
testDegree2Radian (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestMath) ... ok
testDihedralAngles (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestMath) ... ok
testExp (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestMath) ... ok
testFromPolar (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestMath) ... ok
testLog (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestMath) ... ok
testPolar (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestMath) ... ok
testRadian2Degree (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestMath) ... ok
testRotationMatrix (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestMath) ... ok
testLogTrapezoidal (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestNumeric) ... ok
testLogTrapezoidal2D (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestNumeric) ... ok
testSimpson2D (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestNumeric) ... ok
testTrapezoidal (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestNumeric) ... ok
testTrapezoidal2D (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric.TestNumeric) ... ok
testLeapFrog (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric/integrators.ReferenceRegressions) ... ok
testVelocityVerlet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric/integrators.ReferenceRegressions) ... ok
testFastLeapFrog (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric/integrators.TestIntegrators) ... ok
testLeapFrog (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric/integrators.TestIntegrators) ... ok
testVelocityVerlet (build/python-csb-twJ57r/python-csb-1-2-5+dfsg/-pybuild/cpython3_3-7_csb/build/csb/test/cases/numeric/integrators.TestIntegrators) ... ok

----------------------------------------------------------------------
Ran 697 tests in 242.003s

OK (skipped=6)
make[1]: Leaving directory '/build/python-csb-twJ57r/python-csb-1.2.5+dfsg'
   create-stamp debian/debhelper-build-stamp
 fakeroot debian/rules binary-indep
dh binary-indep --with python3 --buildsystem=pybuild
   dh_testroot -i -O--buildsystem=pybuild
   dh_prep -i -O--buildsystem=pybuild
   dh_auto_install -i -O--buildsystem=pybuild
I: pybuild base:217: /usr/bin/python3 setup.py install --root /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb 
Warning: 'classifiers' should be a list, got type 'tuple'
running install
running build
running build_py
running egg_info
writing csb.egg-info/PKG-INFO
writing dependency_links to csb.egg-info/dependency_links.txt
writing entry points to csb.egg-info/entry_points.txt
writing requirements to csb.egg-info/requires.txt
writing top-level names to csb.egg-info/top_level.txt
reading manifest file 'csb.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching '*.*' under directory 'docs'
warning: no previously-included files matching '*.pickle' found under directory 'csb/test/data'
writing manifest file 'csb.egg-info/SOURCES.txt'
running install_lib
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps/embd.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps/csfrag.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps/helloworld.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps/hhfrag.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps/bfit.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps/precision.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps/buildhmm.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps/bfite.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps/promix.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/apps/hhsearch.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/maxent.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/scalemixture.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/mixtures.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/__pycache__/ars.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/__pycache__/maxent.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/__pycache__/mixtures.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/__pycache__/scalemixture.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/__pycache__/rand.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc/neqsteppropagator.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc/singlechain.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc/multichain.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc/__pycache__/singlechain.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc/__pycache__/multichain.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc/__pycache__/propagators.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc/__pycache__/neqsteppropagator.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/samplers/mc/propagators.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/ars.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/rand.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/pdf
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/pdf/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/pdf
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/pdf/parameterized.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/pdf
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/pdf/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/pdf/__pycache__/parameterized.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/pdf/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statistics/pdf/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/pdf/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/build.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/core
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/core/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/core
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/core/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/core/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/core/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/io/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/io/plots.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/io/tsv.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/io
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/io/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/io/__pycache__/tsv.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/io/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/maxent.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/scalemixture.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/mixtures.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/__pycache__/ars.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/__pycache__/maxent.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/__pycache__/mixtures.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/__pycache__/scalemixture.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/__pycache__/rand.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/samplers
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/samplers/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/samplers
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/samplers/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/samplers/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/samplers/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/ars.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/rand.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/pdf
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/pdf/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/pdf
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/pdf/parameterized.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/pdf
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/pdf/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/pdf/__pycache__/parameterized.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/pdf/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statistics/pdf/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/pdf/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/core
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/core/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/core
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/core/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/core/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/core/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/io
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/io/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/io/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statmech
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statmech/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statmech
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statmech/wham.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statmech
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statmech/ensembles.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statmech
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statmech/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statmech/__pycache__/ensembles.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statmech/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statmech/__pycache__/wham.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statmech/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/statmech/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statmech/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/nmr
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/nmr/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/nmr
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/nmr/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/nmr/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/nmr/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/structure
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/structure/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/structure
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/structure/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/structure/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/structure/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/utils
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/utils/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/utils
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/utils/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/utils/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/utils/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/whatif
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/whatif/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/whatif
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/whatif/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/whatif/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/whatif/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/cs
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/cs/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/cs
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/cs/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/cs/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/cs/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/procheck
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/procheck/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/procheck
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/procheck/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/procheck/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/procheck/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/fasta
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/fasta
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/fasta/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/fasta/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/fasta/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/clans
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/clans/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/clans
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/clans/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/clans/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/clans/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/hhpred
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/hhpred/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/hhpred
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/hhpred/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/hhpred/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/hhpred/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/wwpdb
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/wwpdb/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/wwpdb
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/wwpdb/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/wwpdb/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/wwpdb/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/mrc
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/mrc/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/mrc
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/mrc/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/mrc/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/mrc/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/noe
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/noe/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/noe
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/noe/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/io/noe/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/noe/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/fragments
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/fragments/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/fragments
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/fragments/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/fragments/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/fragments/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/hmm
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/hmm/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/hmm
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/hmm/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/hmm/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/hmm/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/sequence
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/sequence
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/sequence/alignment
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/alignment/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/sequence/alignment
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/sequence/alignment/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/alignment/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/sequence/alignment/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/sequence/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/sequence/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/sequence/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/bio/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/numeric
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/numeric/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/numeric
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/numeric/integrators.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/numeric
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/numeric/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/numeric/__pycache__/integrators.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/numeric/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/cases/numeric/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/numeric/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/app.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/mapping.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/3shm_ca.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/pdbout.txt -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/mapping3.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/1nz9.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/1d3z.legacy.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/Xeasy2.peaks -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/test.hhm -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/mapping2.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/d1nz0a_.mfasta -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/d1b24a2.hhm -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/d1nz0a_.a3m -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/ISL5.1.isl -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/2l01.v3.str -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/csb.tsv -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/struct.ali.mfasta -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/Xeasy1.peaks -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/1d3z.regular.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/standard.tsv -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/2JZC.sum -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/3p1u.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/1nz9A.frags -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/2l01.v2.str -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/out.clans -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/ake-xray-ensemble-ca.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/test.fa -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/modified.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/Sparky.peaks -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/modified2.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/d1nz0a_.hhm -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/d1ea0a1.hhr -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/d1nz0a_.pdb -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/test2.hhm -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/data/1C3W_10.mrc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/data
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/test/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statmech
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statmech/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statmech
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statmech/wham.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statmech
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statmech/ensembles.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statmech
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statmech/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statmech/__pycache__/ensembles.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statmech/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statmech/__pycache__/wham.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statmech/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/statmech/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statmech/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/nmr
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/nmr/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/nmr
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/nmr/resources
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/nmr/resources/AtomConnectivity.xml -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/nmr/resources
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/nmr/resources/RandomCoil.Corrections.tsv -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/nmr/resources
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/nmr/resources/RandomCoil.Reference.tsv -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/nmr/resources
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/nmr/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/nmr/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/nmr/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/structure
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/structure/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/structure
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/structure/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/structure/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/structure/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/utils
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/utils/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/utils
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/utils/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/utils/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/utils/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/procheck.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/whatif.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/fasta.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/dssp.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/svg.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/clans.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/wwpdb.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/hhpred.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/cs.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/noe.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/vasco.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__pycache__/whatif.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__pycache__/procheck.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__pycache__/fasta.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__pycache__/wwpdb.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__pycache__/dssp.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__pycache__/clans.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__pycache__/cs.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__pycache__/hhpred.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__pycache__/mrc.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/__pycache__/noe.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/mrc.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/io/psipred.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/fragments
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/fragments/rosetta.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/fragments
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/fragments/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/fragments
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/fragments/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/fragments/__pycache__/rosetta.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/fragments/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/fragments/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/fragments/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/hmm
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/hmm/pseudocounts.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/hmm
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/hmm/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/hmm
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/hmm/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/hmm/__pycache__/pseudocounts.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/hmm/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/hmm/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/hmm/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/sequence
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/sequence/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/sequence
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/sequence/alignment.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/sequence
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/sequence/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/sequence/__pycache__/alignment.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/sequence/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/sequence/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/sequence/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/bio/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/__pycache__
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/numeric
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/numeric/__init__.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/numeric
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/numeric/integrators.py -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/numeric
creating /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/numeric/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/numeric/__pycache__/integrators.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/numeric/__pycache__
copying /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/.pybuild/cpython3_3.7_csb/build/csb/numeric/__pycache__/__init__.cpython-37.pyc -> /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/numeric/__pycache__
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps/embd.py to embd.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps/csfrag.py to csfrag.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps/helloworld.py to helloworld.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps/hhfrag.py to hhfrag.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps/bfit.py to bfit.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps/precision.py to precision.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps/buildhmm.py to buildhmm.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps/bfite.py to bfite.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps/promix.py to promix.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/apps/hhsearch.py to hhsearch.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/maxent.py to maxent.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/scalemixture.py to scalemixture.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/mixtures.py to mixtures.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc/neqsteppropagator.py to neqsteppropagator.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc/singlechain.py to singlechain.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc/multichain.py to multichain.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/samplers/mc/propagators.py to propagators.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/ars.py to ars.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/rand.py to rand.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/pdf/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statistics/pdf/parameterized.py to parameterized.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/build.py to build.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/core/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/io/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/io/plots.py to plots.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/io/tsv.py to tsv.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/maxent.py to maxent.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/scalemixture.py to scalemixture.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/mixtures.py to mixtures.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/samplers/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/ars.py to ars.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/rand.py to rand.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/pdf/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statistics/pdf/parameterized.py to parameterized.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/core/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/io/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statmech/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statmech/wham.py to wham.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/statmech/ensembles.py to ensembles.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/nmr/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/structure/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/utils/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/whatif/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/cs/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/procheck/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/fasta/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/clans/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/hhpred/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/wwpdb/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/mrc/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/io/noe/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/fragments/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/hmm/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/sequence/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/bio/sequence/alignment/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/numeric/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/cases/numeric/integrators.py to integrators.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/test/app.py to app.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statmech/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statmech/wham.py to wham.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/statmech/ensembles.py to ensembles.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/nmr/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/structure/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/utils/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/procheck.py to procheck.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/whatif.py to whatif.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/fasta.py to fasta.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/dssp.py to dssp.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/svg.py to svg.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/clans.py to clans.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/wwpdb.py to wwpdb.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/hhpred.py to hhpred.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/cs.py to cs.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/noe.py to noe.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/vasco.py to vasco.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/mrc.py to mrc.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/io/psipred.py to psipred.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/fragments/rosetta.py to rosetta.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/fragments/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/hmm/pseudocounts.py to pseudocounts.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/hmm/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/sequence/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/bio/sequence/alignment.py to alignment.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/numeric/__init__.py to __init__.cpython-37.pyc
byte-compiling /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb/numeric/integrators.py to integrators.cpython-37.pyc
running install_egg_info
Copying csb.egg-info to /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/lib/python3.7/dist-packages/csb-1.2.5.egg-info
Skipping SOURCES.txt
running install_scripts
Installing csb-bfit script to /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/bin
Installing csb-bfite script to /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/bin
Installing csb-buildhmm script to /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/bin
Installing csb-csfrag script to /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/bin
Installing csb-embd script to /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/bin
Installing csb-hhfrag script to /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/bin
Installing csb-hhsearch script to /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/bin
Installing csb-precision script to /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/bin
Installing csb-promix script to /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/bin
Installing csb-test script to /build/python-csb-twJ57r/python-csb-1.2.5+dfsg/debian/python3-csb/usr/bin
   debian/rules override_dh_install
make[1]: Entering directory '/build/python-csb-twJ57r/python-csb-1.2.5+dfsg'
dh_install
mkdir -p debian/csb/usr
mv debian/python3-csb/usr/bin debian/csb/usr
make[1]: Leaving directory '/build/python-csb-twJ57r/python-csb-1.2.5+dfsg'
   dh_installdocs -i -O--buildsystem=pybuild
   dh_installchangelogs -i -O--buildsystem=pybuild
   dh_installman -i -O--buildsystem=pybuild
   dh_python3 -i -O--buildsystem=pybuild
   dh_installinit -i -O--buildsystem=pybuild
   dh_installsystemduser -i -O--buildsystem=pybuild
   dh_perl -i -O--buildsystem=pybuild
   dh_link -i -O--buildsystem=pybuild
   dh_strip_nondeterminism -i -O--buildsystem=pybuild
   dh_compress -i -O--buildsystem=pybuild
   dh_fixperms -i -O--buildsystem=pybuild
   dh_missing -i -O--buildsystem=pybuild
   dh_installdeb -i -O--buildsystem=pybuild
   dh_gencontrol -i -O--buildsystem=pybuild
   dh_md5sums -i -O--buildsystem=pybuild
   dh_builddeb -i -O--buildsystem=pybuild
dpkg-deb: building package 'csb' in '../csb_1.2.5+dfsg-5_all.deb'.
dpkg-deb: building package 'python3-csb' in '../python3-csb_1.2.5+dfsg-5_all.deb'.
 dpkg-genbuildinfo --build=all
 dpkg-genchanges --build=all >../python-csb_1.2.5+dfsg-5_all.changes
dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
I: running special hook: sync-out /build/python-csb-twJ57r /tmp/python-csb-1.2.5+dfsg-532piz5aj
I: cleaning package lists and apt cache...
W: deleting files in /tmp: tmp9zh8_pcc
W: deleting files in /tmp: 1nz9.full.pickle
W: deleting files in /tmp: 1nz9.model1.pickle
W: deleting files in /tmp: tmp3auslcot
W: deleting files in /tmp: tmp053klsxq
I: creating tarball...
I: done
I: removing tempdir /tmp/mmdebstrap.LvAWMLBV6x...
I: success in 628.2302 seconds
md5: csb_1.2.5+dfsg-5_all.deb: OK
md5: python3-csb_1.2.5+dfsg-5_all.deb: OK
sha1: csb_1.2.5+dfsg-5_all.deb: OK
sha1: python3-csb_1.2.5+dfsg-5_all.deb: OK
sha256: csb_1.2.5+dfsg-5_all.deb: OK
sha256: python3-csb_1.2.5+dfsg-5_all.deb: OK
Checksums: OK