Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/p/plastimatch/plastimatch_1.9.3+dfsg.1-3_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/plastimatch-1.9.3+dfsg.1-3fof5l6jb/plastimatch_1.9.3+dfsg.1-3_amd64.buildinfo Get source package info: plastimatch=1.9.3+dfsg.1-3 Source URL: http://snapshot.notset.fr/mr/package/plastimatch/1.9.3+dfsg.1-3/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6 binutils=2.38-3 binutils-common=2.38-3 binutils-x86-64-linux-gnu=2.38-3 bsdextrautils=2.38-4 bsdutils=1:2.38-4 build-essential=12.9 bzip2=1.0.8-5 cmake=3.23.1-2 cmake-data=3.23.1-2 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.3.0-1 dash=0.5.11+git20210903+057cd650a4ed-8 debconf=1.5.79 debhelper=13.7.1 debianutils=5.7-0.1 dh-autoreconf=20 dh-elpa-helper=2.0.10 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.7 dpkg-dev=1.21.7 dwz=0.14-1 emacsen-common=3.0.4 file=1:5.41-4 findutils=4.9.0-3 g++=4:11.2.0-2 g++-11=11.3.0-1 gcc=4:11.2.0-2 gcc-11=11.3.0-1 gcc-11-base=11.3.0-1 gcc-12-base=12-20220319-1 gettext=0.21-6 gettext-base=0.21-6 grep=3.7-1 groff-base=1.22.4-8 gzip=1.12-1 hdf5-helpers=1.10.7+repack-4 hostname=3.23 icu-devtools=71.1-2 init-system-helpers=1.62 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libaec-dev=1.0.6-1 libaec0=1.0.6-1 libarchive-zip-perl=1.68-1 libarchive13=3.6.0-1 libasan6=11.3.0-1 libatomic1=12-20220319-1 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libbinutils=2.38-3 libblas-dev=3.10.1-1 libblas3=3.10.1-1 libblkid1=2.38-4 libbrotli1=1.0.9-2+b3 libbz2-1.0=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dev=2.33-7 libcap-ng0=0.7.9-2.2+b2 libcap2=1:2.44-1 libcc1-0=12-20220319-1 libcharls-dev=2.3.4-1 libcharls2=2.3.4-1 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38-3 libctf0=2.38-3 libcurl3-gnutls=7.82.0-2 libcurl4=7.82.0-2 libcurl4-openssl-dev=7.82.0-2 libdb5.3=5.3.28+dfsg1-0.8 libdcmtk-dev=3.6.6-5 libdcmtk16=3.6.6-5 libdebconfclient0=0.262 libdebhelper-perl=13.7.1 libdeflate-dev=1.10-2 libdeflate0=1.10-2 libdlib-data=19.10-3.1 libdlib-dev=19.10-3.1 libdlib19=19.10-3.1 libdouble-conversion-dev=3.1.7-4 libdouble-conversion3=3.1.7-4 libdpkg-perl=1.21.7 libelf1=0.186-1 libexpat1=2.4.8-1 libexpat1-dev=2.4.8-1 libffi8=3.4.2-4 libfftw3-bin=3.3.8-2 libfftw3-dev=3.3.8-2 libfftw3-double3=3.3.8-2 libfftw3-long3=3.3.8-2 libfftw3-quad3=3.3.8-2 libfftw3-single3=3.3.8-2 libfile-stripnondeterminism-perl=1.13.0-1 libgcc-11-dev=11.3.0-1 libgcc-s1=12-20220319-1 libgcrypt20=1.10.1-2 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgdcm-dev=3.0.12-1 libgdcm3.0=3.0.12-1 libgfortran5=12-20220319-1 libgmp10=2:6.2.1+dfsg-3 libgnutls30=3.7.4-2 libgomp1=12-20220319-1 libgpg-error0=1.43-3 libgssapi-krb5-2=1.19.2-2+b1 libhdf5-103-1=1.10.7+repack-4 libhdf5-cpp-103-1=1.10.7+repack-4 libhdf5-dev=1.10.7+repack-4 libhdf5-fortran-102=1.10.7+repack-4 libhdf5-hl-100=1.10.7+repack-4 libhdf5-hl-cpp-100=1.10.7+repack-4 libhdf5-hl-fortran-100=1.10.7+repack-4 libhogweed6=3.7.3-1 libicu-dev=71.1-2 libicu71=71.1-2 libidn2-0=2.3.2-2 libinsighttoolkit5-dev=5.2.1-4 libinsighttoolkit5.2=5.2.1-4 libisl23=0.24-2 libitm1=12-20220319-1 libjbig-dev=2.1-3.1+b2 libjbig0=2.1-3.1+b2 libjpeg-dev=1:2.1.2-1 libjpeg62-turbo=1:2.1.2-1 libjpeg62-turbo-dev=1:2.1.2-1 libjson-c5=0.16-1 libjsoncpp25=1.9.5-4 libk5crypto3=1.19.2-2+b1 libkeyutils1=1.6.1-3 libkrb5-3=1.19.2-2+b1 libkrb5support0=1.19.2-2+b1 liblapack-dev=3.10.1-1 liblapack3=3.10.1-1 libldap-2.5-0=2.5.11+dfsg-1 liblsan0=12-20220319-1 liblz4-1=1.9.3-2 liblzma-dev=5.2.5-2.1 liblzma5=5.2.5-2.1 libmagic-mgc=1:5.41-4 libmagic1=1:5.41-4 libminc-dev=2.4.03-5 libminc2-5.2.0=2.4.03-5 libmount1=2.38-4 libmpc3=1.2.1-2 libmpfr6=4.1.0-3 libncurses6=6.3+20220423-1 libncursesw6=6.3+20220423-1 libnetcdf-dev=1:4.8.1-1 libnetcdf19=1:4.8.1-1 libnettle8=3.7.3-1 libnghttp2-14=1.43.0-1 libnifti-dev=3.0.1-8 libnifti2-2=3.0.1-8 libnifti2-dev=3.0.1-8 libnifticdf-dev=3.0.1-8 libnifticdf2=3.0.1-8 libniftiio-dev=3.0.1-8 libniftiio2=3.0.1-8 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libopenjp2-7=2.4.0-6 libp11-kit0=0.24.1-1 libpam-modules=1.4.0-13 libpam-modules-bin=1.4.0-13 libpam-runtime=1.4.0-13 libpam0g=1.4.0-13 libpcre2-8-0=10.40-1 libpcre3=2:8.39-14 libperl5.34=5.34.0-4 libpipeline1=1.5.6-1 libpng-dev=1.6.37-5 libpng16-16=1.6.37-5 libprocps8=2:3.3.17-7+b1 libpsl5=0.21.0-1.2 libquadmath0=12-20220319-1 librhash0=1.4.2-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.28+dfsg-4 libsasl2-modules-db=2.1.28+dfsg-4 libseccomp2=2.5.4-1 libselinux1=3.3-1+b2 libsigsegv2=2.14-1 libsmartcols1=2.38-4 libsocket++1=1.12.13+git20131030.5d039ba-1 libsqlite3-0=3.38.2-1 libsqlite3-dev=3.38.2-1 libssh2-1=1.10.0-3 libssl-dev=1.1.1n-1 libssl1.1=1.1.1n-1 libstdc++-11-dev=11.3.0-1 libstdc++6=12-20220319-1 libsub-override-perl=0.09-2 libsystemd0=250.4-1 libsz2=1.0.6-1 libtasn1-6=4.18.0-4 libtiff-dev=4.3.0-7 libtiff5=4.3.0-7 libtiffxx5=4.3.0-7 libtinfo6=6.3+20220423-1 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.7-3 libtsan0=11.3.0-1 libubsan1=12-20220319-1 libuchardet0=0.0.7-1 libudev1=250.4-1 libunistring2=1.0-1 libuuid1=2.38-4 libuv1=1.44.1-2 libwebp7=1.2.2-2+b1 libwrap0=7.6.q-31 libwrap0-dev=7.6.q-31 libxml2=2.9.13+dfsg-1+b1 libxml2-dev=2.9.13+dfsg-1+b1 libznz-dev=3.0.1-8 libznz3=3.0.1-8 libzstd1=1.5.2+dfsg-1 linux-libc-dev=5.17.3-1 login=1:4.11.1+dfsg1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.2-1 mawk=1.3.4.20200120-3+b1 ncurses-base=6.3+20220423-1 ncurses-bin=6.3+20220423-1 patch=2.7.6-7 perl=5.34.0-4 perl-base=5.34.0-4 perl-modules-5.34=5.34.0-4 po-debconf=1.0.21+nmu1 procps=2:3.3.17-7+b1 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sysvinit-utils=3.03-1 tar=1.34+dfsg-1 util-linux=2.38-4 util-linux-extra=2.38-4 uuid-dev=2.38-4 xz-utils=5.2.5-2.1 zlib1g=1:1.2.11.dfsg-4 zlib1g-dev=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220428T212734Z/ unstable main deb-src http://snapshot.notset.fr/archive/debian/20220428T212734Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220518T205326Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220428T025707Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d plastimatch=1.9.3+dfsg.1-3 && mkdir -p /build/plastimatch-RWww3A && dpkg-source --no-check -x /*.dsc /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 && chown -R builduser:builduser /build/plastimatch-RWww3A" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1651141708" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/plastimatch-RWww3A /tmp/plastimatch-1.9.3+dfsg.1-3fof5l6jb bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220428T025707Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.6DS3RLrpTt as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.6DS3RLrpTt Reading package lists... Building dependency tree... util-linux is already the newest version (2.38-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 135 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220428T025707Z unstable/main amd64 libfakeroot amd64 1.28-1 [48.2 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220428T025707Z unstable/main amd64 fakeroot amd64 1.28-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 135 kB in 0s (1011 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4627 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.28-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.28-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.28-1_amd64.deb ... Unpacking fakeroot (1.28-1) ... Setting up libfakeroot:amd64 (1.28-1) ... Setting up fakeroot (1.28-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220428T212734Z/ unstable main deb-src http://snapshot.notset.fr/archive/debian/20220428T212734Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220518T205326Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220428T025707Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.6DS3RLrpTt Get:1 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable InRelease [165 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220518T205326Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220428T025707Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable/main Sources [12.9 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable/main amd64 Packages [12.4 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220518T205326Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220518T205326Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220518T205326Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220518T205326Z unstable/main amd64 Packages [12.4 MB] Fetched 38.1 MB in 31s (1219 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.6DS3RLrpTt I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d plastimatch=1.9.3+dfsg.1-3 && mkdir -p /build/plastimatch-RWww3A && dpkg-source --no-check -x /*.dsc /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 && chown -R builduser:builduser /build/plastimatch-RWww3A"' exec /tmp/mmdebstrap.6DS3RLrpTt Reading package lists... NOTICE: 'plastimatch' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/plastimatch.git Please use: git clone https://salsa.debian.org/med-team/plastimatch.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1393 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable/main plastimatch 1.9.3+dfsg.1-3 (dsc) [2397 B] Get:2 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable/main plastimatch 1.9.3+dfsg.1-3 (tar) [1381 kB] Get:3 http://snapshot.notset.fr/archive/debian/20220428T212734Z unstable/main plastimatch 1.9.3+dfsg.1-3 (diff) [9676 B] Fetched 1393 kB in 1s (1141 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'plastimatch_1.9.3+dfsg.1-3.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting plastimatch in /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 dpkg-source: info: unpacking plastimatch_1.9.3+dfsg.1.orig.tar.xz dpkg-source: info: unpacking plastimatch_1.9.3+dfsg.1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying cxx17.patch dpkg-source: info: applying gcc-11.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1651141708" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.6DS3RLrpTt dpkg-buildpackage: info: source package plastimatch dpkg-buildpackage: info: source version 1.9.3+dfsg.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1' dh_auto_configure -- -DCMAKE_BUILD_TYPE:STRING=RELEASE -DCMAKE_SKIP_RPATH:BOOL=ON -DPLM_CONFIG_DEBIAN_BUILD:BOOL=ON -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING:BOOL=ON cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_BUILD_TYPE:STRING=RELEASE -DCMAKE_SKIP_RPATH:BOOL=ON -DPLM_CONFIG_DEBIAN_BUILD:BOOL=ON -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING:BOOL=ON .. -- The C compiler identification is GNU 11.3.0 -- The CXX compiler identification is GNU 11.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test DCMTK_HAS_EC_INVALIDVALUE -- Performing Test DCMTK_HAS_EC_INVALIDVALUE - Success -- DCMTK version 3.6.6 found. -- Etags targets added. -- Could NOT find Git (missing: GIT_EXECUTABLE) -- Could NOT find libLBFGS (missing: libLBFGS_LIBRARY libLBFGS_INCLUDE_DIR) -- Could NOT find nlopt (missing: nlopt_LIBRARY nlopt_INCLUDE_DIR) -- Looking for CL_VERSION_2_2 -- Looking for CL_VERSION_2_2 - not found -- Looking for CL_VERSION_2_1 -- Looking for CL_VERSION_2_1 - not found -- Looking for CL_VERSION_2_0 -- Looking for CL_VERSION_2_0 - not found -- Looking for CL_VERSION_1_2 -- Looking for CL_VERSION_1_2 - not found -- Looking for CL_VERSION_1_1 -- Looking for CL_VERSION_1_1 - not found -- Looking for CL_VERSION_1_0 -- Looking for CL_VERSION_1_0 - not found -- Could NOT find OpenCL (missing: OpenCL_LIBRARY OpenCL_INCLUDE_DIR) -- Check for compiler OpenMP support... -- OpenMP flags "-fopenmp", OpenMP libraries "" -- SSE2_FLAGS "-msse2 -mfpmath=sse" -- Could NOT find wxWidgets (missing: wxWidgets_LIBRARIES wxWidgets_INCLUDE_DIRS) -- CUDA Not found -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Looking for wxWidgets - not found. -- Looking for Matlab - not found. -- Looking for Octave - not found. -- Plastimatch version is 1.9.3 -- The imported target "vtkgdcm" references the file "/usr/lib/x86_64-linux-gnu/libvtkgdcm.so.3.0.12" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmsharpglue" references the file "/usr/lib/cli/vtkgdcm-sharp-3.0/libvtkgdcmsharpglue.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmJava" references the file "/usr/lib/x86_64-linux-gnu/jni/libvtkgdcmJava.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmPython" references the file "/usr/lib/python3/dist-packages/vtkgdcmPython.cpython-310-x86_64-linux-gnu.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmPythonD" references the file "/usr/lib/x86_64-linux-gnu/libvtkgdcmPythonD.so.3.0.12" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmdump" references the file "/usr/bin/gdcmdump" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmdiff" references the file "/usr/bin/gdcmdiff" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmraw" references the file "/usr/bin/gdcmraw" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscanner" references the file "/usr/bin/gdcmscanner" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmanon" references the file "/usr/bin/gdcmanon" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmgendir" references the file "/usr/bin/gdcmgendir" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmimg" references the file "/usr/bin/gdcmimg" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmconv" references the file "/usr/bin/gdcmconv" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmtar" references the file "/usr/bin/gdcmtar" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcminfo" references the file "/usr/bin/gdcminfo" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscu" references the file "/usr/bin/gdcmscu" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmxml" references the file "/usr/bin/gdcmxml" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpap3" references the file "/usr/bin/gdcmpap3" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpdf" references the file "/usr/bin/gdcmpdf" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.7") found components: CXX C -- ITK_VERSION = 5.2.1 found -- Looking for C++ include itkVectorCentralDifferenceImageFunction.h -- Looking for C++ include itkVectorCentralDifferenceImageFunction.h - not found -- Looking for C++ include itkVectorCentralDifferenceImageFunction.h -- Looking for C++ include itkVectorCentralDifferenceImageFunction.h - not found -- ITK_BASE = /usr -- Looking for Qt4 - not found -- Looking for Qt5 - not found -- Could NOT find yaml (missing: yaml_LIBRARIES yaml_INCLUDE_DIR) -- Machine is 64-bit -- Checking host processor: x86_64 -- Checking target processor: x86_64 -- Checking epsilon: 2.22045E-16 2.22045E-16 2.22045E-16 -- Checking sign of char: char is signed -- Appending /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -- Not appending /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.2 -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1' dh_auto_build -a cd obj-x86_64-linux-gnu && make -j10 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 -B/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/CMakeFiles /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/depend make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/depend make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/depend make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/depend make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/depend make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/DependInfo.cmake --color= make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/devillard /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29/CMakeFiles/inih.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/specfun /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun/CMakeFiles/specfun.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress/CMakeFiles/nkidecompress.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp/CMakeFiles/plmclp.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys/CMakeFiles/plmsys.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/build make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/build make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/build make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 1%] Building C object libs/inih-r29/CMakeFiles/inih.dir/ini.c.o [ 1%] Building CXX object libs/nkidecompress/CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cc -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT libs/inih-r29/CMakeFiles/inih.dir/ini.c.o -MF CMakeFiles/inih.dir/ini.c.o.d -o CMakeFiles/inih.dir/ini.c.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29/ini.c cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -std=gnu++17 -MD -MT libs/nkidecompress/CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o -MF CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o.d -o CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress/nkidecompress.cxx [ 1%] Building C object libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/lib/lbfgs.c.o [ 1%] Building CXX object libs/devillard/CMakeFiles/devillard.dir/wirth.cpp.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cc -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -MF CMakeFiles/lbfgs.dir/lib/lbfgs.c.o.d -o CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/lib/lbfgs.c cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -std=gnu++17 -MD -MT libs/devillard/CMakeFiles/devillard.dir/wirth.cpp.o -MF CMakeFiles/devillard.dir/wirth.cpp.o.d -o CMakeFiles/devillard.dir/wirth.cpp.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard/wirth.cpp [ 1%] Building CXX object libs/inih-r29/CMakeFiles/inih.dir/INIReader.cpp.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -std=gnu++17 -MD -MT libs/inih-r29/CMakeFiles/inih.dir/INIReader.cpp.o -MF CMakeFiles/inih.dir/INIReader.cpp.o.d -o CMakeFiles/inih.dir/INIReader.cpp.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29/INIReader.cpp [ 1%] Building CXX object src/plastimatch/clp/CMakeFiles/plmclp.dir/plm_clp.cxx.o [ 1%] Building C object libs/specfun/CMakeFiles/specfun.dir/mpbdv.c.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -std=gnu++17 -MD -MT src/plastimatch/clp/CMakeFiles/plmclp.dir/plm_clp.cxx.o -MF CMakeFiles/plmclp.dir/plm_clp.cxx.o.d -o CMakeFiles/plmclp.dir/plm_clp.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp/plm_clp.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cc -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT libs/specfun/CMakeFiles/specfun.dir/mpbdv.c.o -MF CMakeFiles/specfun.dir/mpbdv.c.o.d -o CMakeFiles/specfun.dir/mpbdv.c.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/specfun/mpbdv.c [ 1%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/dlib_threads.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/dlib_threads.cxx.o -MF CMakeFiles/plmsys.dir/dlib_threads.cxx.o.d -o CMakeFiles/plmsys.dir/dlib_threads.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/dlib_threads.cxx [ 1%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/dir_list.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/dir_list.cxx.o -MF CMakeFiles/plmsys.dir/dir_list.cxx.o.d -o CMakeFiles/plmsys.dir/dir_list.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/dir_list.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard/wirth.cpp: In function ‘elem_type kth_smallest(elem_type*, int, int)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard/wirth.cpp:31:18: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 31 | register int i,j,l,m ; | ^ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard/wirth.cpp:31:20: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 31 | register int i,j,l,m ; | ^ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard/wirth.cpp:31:22: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 31 | register int i,j,l,m ; | ^ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard/wirth.cpp:31:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 31 | register int i,j,l,m ; | ^ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard/wirth.cpp:32:24: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 32 | register elem_type x ; | ^ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard/wirth.cpp:8:45: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister] 8 | #define ELEM_SWAP(a,b) { register elem_type t=(a);(a)=(b);(b)=t; } | ^ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard/wirth.cpp:43:17: note: in expansion of macro ‘ELEM_SWAP’ 43 | ELEM_SWAP(a[i],a[j]) ; | ^~~~~~~~~ [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/file_util.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/file_util.cxx.o -MF CMakeFiles/plmsys.dir/file_util.cxx.o.d -o CMakeFiles/plmsys.dir/file_util.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/file_util.cxx [ 2%] Linking CXX static library ../../libdevillard.a cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/cmake -P CMakeFiles/devillard.dir/cmake_clean_target.cmake cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/cmake -E cmake_link_script CMakeFiles/devillard.dir/link.txt --verbose=1 [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/logfile.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/logfile.cxx.o -MF CMakeFiles/plmsys.dir/logfile.cxx.o.d -o CMakeFiles/plmsys.dir/logfile.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/logfile.cxx /usr/bin/ar qc ../../libdevillard.a CMakeFiles/devillard.dir/wirth.cpp.o /usr/bin/ranlib ../../libdevillard.a make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 2%] Built target devillard [ 2%] Linking CXX static library ../../libnkidecompress.a cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/cmake -P CMakeFiles/nkidecompress.dir/cmake_clean_target.cmake [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/option_range.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/option_range.cxx.o -MF CMakeFiles/plmsys.dir/option_range.cxx.o.d -o CMakeFiles/plmsys.dir/option_range.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/option_range.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/cmake -E cmake_link_script CMakeFiles/nkidecompress.dir/link.txt --verbose=1 [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/path_util.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/path_util.cxx.o -MF CMakeFiles/plmsys.dir/path_util.cxx.o.d -o CMakeFiles/plmsys.dir/path_util.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/path_util.cxx /usr/bin/ar qc ../../libnkidecompress.a CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o [ 2%] Linking C static library ../../libspecfun.a cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -P CMakeFiles/specfun.dir/cmake_clean_target.cmake /usr/bin/ranlib ../../libnkidecompress.a make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -E cmake_link_script CMakeFiles/specfun.dir/link.txt --verbose=1 [ 2%] Built target nkidecompress /usr/bin/ar qc ../../libspecfun.a CMakeFiles/specfun.dir/mpbdv.c.o [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_endian.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_endian.cxx.o -MF CMakeFiles/plmsys.dir/plm_endian.cxx.o.d -o CMakeFiles/plmsys.dir/plm_endian.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/plm_endian.cxx /usr/bin/ranlib ../../libspecfun.a make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 3%] Built target specfun [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_fwrite.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_fwrite.cxx.o -MF CMakeFiles/plmsys.dir/plm_fwrite.cxx.o.d -o CMakeFiles/plmsys.dir/plm_fwrite.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/plm_fwrite.cxx [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o -MF CMakeFiles/plmsys.dir/plm_sleep.cxx.o.d -o CMakeFiles/plmsys.dir/plm_sleep.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/plm_sleep.cxx [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_timer.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_timer.cxx.o -MF CMakeFiles/plmsys.dir/plm_timer.cxx.o.d -o CMakeFiles/plmsys.dir/plm_timer.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/plm_timer.cxx [ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/print_and_exit.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/print_and_exit.cxx.o -MF CMakeFiles/plmsys.dir/print_and_exit.cxx.o.d -o CMakeFiles/plmsys.dir/print_and_exit.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/print_and_exit.cxx [ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/string_util.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/string_util.cxx.o -MF CMakeFiles/plmsys.dir/string_util.cxx.o.d -o CMakeFiles/plmsys.dir/string_util.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/string_util.cxx [ 4%] Building C object src/plastimatch/sys/CMakeFiles/plmsys.dir/delayload_legacy.c.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/cc -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/delayload_legacy.c.o -MF CMakeFiles/plmsys.dir/delayload_legacy.c.o.d -o CMakeFiles/plmsys.dir/delayload_legacy.c.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys/delayload_legacy.c [ 4%] Linking C static library ../../liblbfgs.a cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cmake -P CMakeFiles/lbfgs.dir/cmake_clean_target.cmake cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cmake -E cmake_link_script CMakeFiles/lbfgs.dir/link.txt --verbose=1 /usr/bin/ar qc ../../liblbfgs.a CMakeFiles/lbfgs.dir/lib/lbfgs.c.o /usr/bin/ranlib ../../liblbfgs.a make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 4%] Built target lbfgs [ 4%] Linking CXX static library ../../libinih.a cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cmake -P CMakeFiles/inih.dir/cmake_clean_target.cmake cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cmake -E cmake_link_script CMakeFiles/inih.dir/link.txt --verbose=1 /usr/bin/ar qc ../../libinih.a CMakeFiles/inih.dir/ini.c.o CMakeFiles/inih.dir/INIReader.cpp.o /usr/bin/ranlib ../../libinih.a make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 4%] Built target inih [ 4%] Linking CXX shared library ../../../libplmsys.so cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmsys.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmsys.so.1.9 -o ../../../libplmsys.so.1.9 CMakeFiles/plmsys.dir/dir_list.cxx.o CMakeFiles/plmsys.dir/dlib_threads.cxx.o CMakeFiles/plmsys.dir/file_util.cxx.o CMakeFiles/plmsys.dir/logfile.cxx.o CMakeFiles/plmsys.dir/option_range.cxx.o CMakeFiles/plmsys.dir/path_util.cxx.o CMakeFiles/plmsys.dir/plm_endian.cxx.o CMakeFiles/plmsys.dir/plm_fwrite.cxx.o CMakeFiles/plmsys.dir/plm_sleep.cxx.o CMakeFiles/plmsys.dir/plm_timer.cxx.o CMakeFiles/plmsys.dir/print_and_exit.cxx.o CMakeFiles/plmsys.dir/string_util.cxx.o CMakeFiles/plmsys.dir/delayload_legacy.c.o -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -ldl -lpthread -lpthread -lnsl -lpng -lz -ljpeg -lblas -llapack -lsqlite3 cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/cmake -E cmake_symlink_library ../../../libplmsys.so.1.9 ../../../libplmsys.so.1.9 ../../../libplmsys.so make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 4%] Built target plmsys make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base/CMakeFiles/plmbase.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 5%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_extract.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_extract.cxx.o -MF CMakeFiles/plmbase.dir/cxt_extract.cxx.o.d -o CMakeFiles/plmbase.dir/cxt_extract.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/cxt_extract.cxx [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/aperture.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_header.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/astroid_dose.cxx.o [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_warp.cxx.o [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/aperture.cxx.o -MF CMakeFiles/plmbase.dir/aperture.cxx.o.d -o CMakeFiles/plmbase.dir/aperture.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/aperture.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/astroid_dose.cxx.o -MF CMakeFiles/plmbase.dir/astroid_dose.cxx.o.d -o CMakeFiles/plmbase.dir/astroid_dose.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/astroid_dose.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_header.cxx.o -MF CMakeFiles/plmbase.dir/bspline_header.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_header.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/bspline_header.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o -MF CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/bspline_interpolate.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -msse2 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_warp.cxx.o -MF CMakeFiles/plmbase.dir/bspline_warp.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_warp.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/bspline_warp.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform.cxx.o -MF CMakeFiles/plmbase.dir/bspline_xform.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_xform.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/bspline_xform.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o -MF CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/bspline_xform_legacy.cxx [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/beam_geometry.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/beam_geometry.cxx.o -MF CMakeFiles/plmbase.dir/beam_geometry.cxx.o.d -o CMakeFiles/plmbase.dir/beam_geometry.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/beam_geometry.cxx [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_io.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_io.cxx.o -MF CMakeFiles/plmbase.dir/cxt_io.cxx.o.d -o CMakeFiles/plmbase.dir/cxt_io.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/cxt_io.cxx [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_probe.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_probe.cxx.o -MF CMakeFiles/plmbase.dir/dicom_probe.cxx.o.d -o CMakeFiles/plmbase.dir/dicom_probe.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dicom_probe.cxx [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_util.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_util.cxx.o -MF CMakeFiles/plmbase.dir/dicom_util.cxx.o.d -o CMakeFiles/plmbase.dir/dicom_util.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dicom_util.cxx [ 7%] Linking CXX static library libplmclp.a cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp && /usr/bin/cmake -P CMakeFiles/plmclp.dir/cmake_clean_target.cmake cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmclp.dir/link.txt --verbose=1 /usr/bin/ar qc libplmclp.a CMakeFiles/plmclp.dir/plm_clp.cxx.o /usr/bin/ranlib libplmclp.a make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 7%] Built target plmclp [ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_cosines.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/direction_cosines.cxx.o -MF CMakeFiles/plmbase.dir/direction_cosines.cxx.o.d -o CMakeFiles/plmbase.dir/direction_cosines.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/direction_cosines.cxx [ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_matrices.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/direction_matrices.cxx.o -MF CMakeFiles/plmbase.dir/direction_matrices.cxx.o.d -o CMakeFiles/plmbase.dir/direction_matrices.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/direction_matrices.cxx [ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/exchkeys.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/exchkeys.cxx.o -MF CMakeFiles/plmbase.dir/exchkeys.cxx.o.d -o CMakeFiles/plmbase.dir/exchkeys.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/exchkeys.cxx [ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/float_pair_list.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/float_pair_list.cxx.o -MF CMakeFiles/plmbase.dir/float_pair_list.cxx.o.d -o CMakeFiles/plmbase.dir/float_pair_list.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/float_pair_list.cxx [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/gaussian.cxx.o [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/hnd_io.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/gaussian.cxx.o -MF CMakeFiles/plmbase.dir/gaussian.cxx.o.d -o CMakeFiles/plmbase.dir/gaussian.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/gaussian.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/hnd_io.cxx.o -MF CMakeFiles/plmbase.dir/hnd_io.cxx.o.d -o CMakeFiles/plmbase.dir/hnd_io.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/hnd_io.cxx [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/image_stats.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/image_stats.cxx.o -MF CMakeFiles/plmbase.dir/image_stats.cxx.o.d -o CMakeFiles/plmbase.dir/image_stats.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/image_stats.cxx [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/interpolate.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/interpolate.cxx.o -MF CMakeFiles/plmbase.dir/interpolate.cxx.o.d -o CMakeFiles/plmbase.dir/interpolate.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/interpolate.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_bbox.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_bbox.cxx.o -MF CMakeFiles/plmbase.dir/itk_bbox.cxx.o.d -o CMakeFiles/plmbase.dir/itk_bbox.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_bbox.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_directions.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_directions.cxx.o -MF CMakeFiles/plmbase.dir/itk_directions.cxx.o.d -o CMakeFiles/plmbase.dir/itk_directions.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_directions.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image.cxx.o -MF CMakeFiles/plmbase.dir/itk_image.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_accumulate.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_cast.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_cast.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_cast.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_cast.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_cast.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_clone.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_clone.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_clone.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_clone.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_clone.cxx [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_create.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_create.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_create.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_create.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_create.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_header_compare.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of ‘typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = char; typename itk::Image::Pointer = itk::SmartPointer >]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx:21:27: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘itk::ImageIOBase::IOComponentType’ {aka ‘itk::CommonEnums::IOComponent’} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of ‘typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = double; typename itk::Image::Pointer = itk::SmartPointer >]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx:20:27: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘itk::ImageIOBase::IOComponentType’ {aka ‘itk::CommonEnums::IOComponent’} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of ‘typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = float; typename itk::Image::Pointer = itk::SmartPointer >]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx:20:27: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘itk::ImageIOBase::IOComponentType’ {aka ‘itk::CommonEnums::IOComponent’} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_int64.cxx [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_short.cxx [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of ‘typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = int; typename itk::Image::Pointer = itk::SmartPointer >]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx:20:27: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘itk::ImageIOBase::IOComponentType’ {aka ‘itk::CommonEnums::IOComponent’} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_short.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of ‘typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = short int; typename itk::Image::Pointer = itk::SmartPointer >]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_short.cxx:20:27: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘itk::ImageIOBase::IOComponentType’ {aka ‘itk::CommonEnums::IOComponent’} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_int64.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of ‘typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = long int; typename itk::Image::Pointer = itk::SmartPointer >]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_int64.cxx:20:27: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘itk::ImageIOBase::IOComponentType’ {aka ‘itk::CommonEnums::IOComponent’} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of ‘typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = unsigned char; typename itk::Image::Pointer = itk::SmartPointer >]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx:20:27: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘itk::ImageIOBase::IOComponentType’ {aka ‘itk::CommonEnums::IOComponent’} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uint64.cxx In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of ‘typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = unsigned int; typename itk::Image::Pointer = itk::SmartPointer >]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx:20:27: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘itk::ImageIOBase::IOComponentType’ {aka ‘itk::CommonEnums::IOComponent’} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uint64.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of ‘typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = long unsigned int; typename itk::Image::Pointer = itk::SmartPointer >]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_uint64.cxx:20:27: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘itk::ImageIOBase::IOComponentType’ {aka ‘itk::CommonEnums::IOComponent’} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of ‘typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = short unsigned int; typename itk::Image::Pointer = itk::SmartPointer >]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx:20:27: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘itk::ImageIOBase::IOComponentType’ {aka ‘itk::CommonEnums::IOComponent’} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_load_vec.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_origin.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_origin.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_origin.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_origin.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_origin.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_region.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_region.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_region.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_region.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_region.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_save.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_save.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_save.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_save.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_save.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_shift_scale.cxx [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_stats.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_stats.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_stats.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_stats.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_stats.cxx [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_metadata.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_metadata.cxx.o -MF CMakeFiles/plmbase.dir/itk_metadata.cxx.o.d -o CMakeFiles/plmbase.dir/itk_metadata.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_metadata.cxx [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_pointset.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_pointset.cxx.o -MF CMakeFiles/plmbase.dir/itk_pointset.cxx.o.d -o CMakeFiles/plmbase.dir/itk_pointset.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_pointset.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_resample.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_resample.cxx.o -MF CMakeFiles/plmbase.dir/itk_resample.cxx.o.d -o CMakeFiles/plmbase.dir/itk_resample.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_resample.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_volume_header.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_volume_header.cxx.o -MF CMakeFiles/plmbase.dir/itk_volume_header.cxx.o.d -o CMakeFiles/plmbase.dir/itk_volume_header.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_volume_header.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_warp.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_warp.cxx.o -MF CMakeFiles/plmbase.dir/itk_warp.cxx.o.d -o CMakeFiles/plmbase.dir/itk_warp.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_warp.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/mc_dose.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/mc_dose.cxx.o -MF CMakeFiles/plmbase.dir/mc_dose.cxx.o.d -o CMakeFiles/plmbase.dir/mc_dose.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/mc_dose.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/metadata.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/metadata.cxx.o -MF CMakeFiles/plmbase.dir/metadata.cxx.o.d -o CMakeFiles/plmbase.dir/metadata.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/metadata.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/mha_io.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/mha_io.cxx.o -MF CMakeFiles/plmbase.dir/mha_io.cxx.o.d -o CMakeFiles/plmbase.dir/mha_io.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/mha_io.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/nki_io.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/nki_io.cxx.o -MF CMakeFiles/plmbase.dir/nki_io.cxx.o.d -o CMakeFiles/plmbase.dir/nki_io.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/nki_io.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/parameter_parser.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/parameter_parser.cxx.o -MF CMakeFiles/plmbase.dir/parameter_parser.cxx.o.d -o CMakeFiles/plmbase.dir/parameter_parser.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/parameter_parser.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_file_format.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_file_format.cxx.o -MF CMakeFiles/plmbase.dir/plm_file_format.cxx.o.d -o CMakeFiles/plmbase.dir/plm_file_format.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_file_format.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image.cxx.o -MF CMakeFiles/plmbase.dir/plm_image.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_image.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_convert.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_convert.cxx.o -MF CMakeFiles/plmbase.dir/plm_image_convert.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image_convert.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_image_convert.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_header.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_header.cxx.o -MF CMakeFiles/plmbase.dir/plm_image_header.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image_header.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_image_header.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_file_format.cxx: In function ‘Plm_file_format plm_file_format_deduce(const char*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_file_format.cxx:97:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 97 | fgets (line, MAX_LINE, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_set.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_set.cxx.o -MF CMakeFiles/plmbase.dir/plm_image_set.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image_set.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_image_set.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_type.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_type.cxx.o -MF CMakeFiles/plmbase.dir/plm_image_type.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image_type.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_image_type.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_warp.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_warp.cxx.o -MF CMakeFiles/plmbase.dir/plm_warp.cxx.o.d -o CMakeFiles/plmbase.dir/plm_warp.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/plm_warp.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pointset.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/pointset.cxx.o -MF CMakeFiles/plmbase.dir/pointset.cxx.o.d -o CMakeFiles/plmbase.dir/pointset.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset.cxx [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pointset_warp.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/pointset_warp.cxx.o -MF CMakeFiles/plmbase.dir/pointset_warp.cxx.o.d -o CMakeFiles/plmbase.dir/pointset_warp.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset_warp.cxx [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image.cxx.o -MF CMakeFiles/plmbase.dir/proj_image.cxx.o.d -o CMakeFiles/plmbase.dir/proj_image.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image.cxx [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image_dir.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image_dir.cxx.o -MF CMakeFiles/plmbase.dir/proj_image_dir.cxx.o.d -o CMakeFiles/plmbase.dir/proj_image_dir.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image_dir.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image.cxx: In function ‘void pfm_load(Proj_image*, const char*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image.cxx:175:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 175 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image.cxx:183:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 183 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_image.cxx:190:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 190 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset.cxx: In member function ‘void Pointset::load_fcsv(const char*) [with T = Labeled_point]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset.cxx:65:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 65 | fgets (s, 1024, fp); | ~~~~~~^~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset.cxx: In member function ‘void Pointset::load_fcsv(const char*) [with T = Point]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pointset.cxx:65:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_matrix.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/proj_matrix.cxx.o -MF CMakeFiles/plmbase.dir/proj_matrix.cxx.o.d -o CMakeFiles/plmbase.dir/proj_matrix.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_matrix.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_volume.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/proj_volume.cxx.o -MF CMakeFiles/plmbase.dir/proj_volume.cxx.o.d -o CMakeFiles/plmbase.dir/proj_volume.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_volume.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pwlut.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/pwlut.cxx.o -MF CMakeFiles/plmbase.dir/pwlut.cxx.o.d -o CMakeFiles/plmbase.dir/pwlut.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/pwlut.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rasterize_slice.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rasterize_slice.cxx.o -MF CMakeFiles/plmbase.dir/rasterize_slice.cxx.o.d -o CMakeFiles/plmbase.dir/rasterize_slice.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rasterize_slice.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rasterizer.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rasterizer.cxx.o -MF CMakeFiles/plmbase.dir/rasterizer.cxx.o.d -o CMakeFiles/plmbase.dir/rasterizer.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rasterizer.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_volume.cxx: In member function ‘void Proj_volume::save_header(const char*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_volume.cxx:299:30: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 299 | fprintf (fp, "num_steps=%d\n", d_ptr->num_steps); | ~^ ~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_volume.cxx:301:30: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 301 | fprintf (fp, "image_dim=%d %d\n", | ~^ | | | int | %ld 302 | d_ptr->image_dim[0], d_ptr->image_dim[1]); | ~~~~~~~~~~~~~~~~~~~ | | | plm_long {aka long int} /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/proj_volume.cxx:301:33: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 301 | fprintf (fp, "image_dim=%d %d\n", | ~^ | | | int | %ld 302 | d_ptr->image_dim[0], d_ptr->image_dim[1]); | ~~~~~~~~~~~~~~~~~~~ | | | plm_long {aka long int} [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o -MF CMakeFiles/plmbase.dir/raw_pointset.cxx.o.d -o CMakeFiles/plmbase.dir/raw_pointset.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/raw_pointset.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o -MF CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o.d -o CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/ray_trace_probe.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o -MF CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o.d -o CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/ray_trace_uniform.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/raw_pointset.cxx: In function ‘Raw_pointset* pointset_load_fcsv(const char*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/raw_pointset.cxx:81:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 81 | fgets (s, 1024, fp); | ~~~~~~^~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/raw_pointset.cxx: In function ‘Raw_pointset* pointset_load_txt(const char*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/raw_pointset.cxx:135:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 135 | fgets (s, 1024, fp); | ~~~~~~^~~~~~~~~~~~~ [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume.cxx.o -MF CMakeFiles/plmbase.dir/rpl_volume.cxx.o.d -o CMakeFiles/plmbase.dir/rpl_volume.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rpl_volume.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o -MF CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o.d -o CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rpl_volume_lut.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -MF CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o.d -o CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtds_dcmtk.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study.cxx.o -MF CMakeFiles/plmbase.dir/rt_study.cxx.o.d -o CMakeFiles/plmbase.dir/rt_study.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rt_study.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o -MF CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o.d -o CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rt_study_metadata.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtog_io.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtog_io.cxx.o -MF CMakeFiles/plmbase.dir/rtog_io.cxx.o.d -o CMakeFiles/plmbase.dir/rtog_io.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtog_io.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtss.cxx.o -MF CMakeFiles/plmbase.dir/rtss.cxx.o.d -o CMakeFiles/plmbase.dir/rtss.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtss.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rpl_volume.cxx: In member function ‘void Rpl_volume::apply_beam_modifiers()’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rpl_volume.cxx:1471:22: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long int’ [-Wformat=] 1471 | printf ("ires = %d %d\n", ires[0], ires[1]); | ~^ ~~~~~~~ | | | | int long int | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rpl_volume.cxx:1471:25: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long int’ [-Wformat=] 1471 | printf ("ires = %d %d\n", ires[0], ires[1]); | ~^ ~~~~~~~ | | | | int long int | %ld [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o -MF CMakeFiles/plmbase.dir/rtss_contour.cxx.o.d -o CMakeFiles/plmbase.dir/rtss_contour.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtss_contour.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_roi.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_roi.cxx.o -MF CMakeFiles/plmbase.dir/rtss_roi.cxx.o.d -o CMakeFiles/plmbase.dir/rtss_roi.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtss_roi.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan.cxx.o -MF CMakeFiles/plmbase.dir/rtplan.cxx.o.d -o CMakeFiles/plmbase.dir/rtplan.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtplan.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_beam.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_beam.cxx.o -MF CMakeFiles/plmbase.dir/rtplan_beam.cxx.o.d -o CMakeFiles/plmbase.dir/rtplan_beam.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtplan_beam.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o -MF CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o.d -o CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/rtplan_control_pt.cxx [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/segmentation.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/segmentation.cxx.o -MF CMakeFiles/plmbase.dir/segmentation.cxx.o.d -o CMakeFiles/plmbase.dir/segmentation.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/segmentation.cxx [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/slice_extract.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/slice_extract.cxx.o -MF CMakeFiles/plmbase.dir/slice_extract.cxx.o.d -o CMakeFiles/plmbase.dir/slice_extract.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/slice_extract.cxx [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/slice_list.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/slice_list.cxx.o -MF CMakeFiles/plmbase.dir/slice_list.cxx.o.d -o CMakeFiles/plmbase.dir/slice_list.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/slice_list.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ss_img_extract.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/ss_img_extract.cxx.o -MF CMakeFiles/plmbase.dir/ss_img_extract.cxx.o.d -o CMakeFiles/plmbase.dir/ss_img_extract.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/ss_img_extract.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ss_list_io.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/ss_list_io.cxx.o -MF CMakeFiles/plmbase.dir/ss_list_io.cxx.o.d -o CMakeFiles/plmbase.dir/ss_list_io.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/ss_list_io.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/threading.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/threading.cxx.o -MF CMakeFiles/plmbase.dir/threading.cxx.o.d -o CMakeFiles/plmbase.dir/threading.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/threading.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/thumbnail.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/thumbnail.cxx.o -MF CMakeFiles/plmbase.dir/thumbnail.cxx.o.d -o CMakeFiles/plmbase.dir/thumbnail.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/thumbnail.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/vf.cxx.o -MF CMakeFiles/plmbase.dir/vf.cxx.o.d -o CMakeFiles/plmbase.dir/vf.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/vf.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_convolve.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/vf_convolve.cxx.o -MF CMakeFiles/plmbase.dir/vf_convolve.cxx.o.d -o CMakeFiles/plmbase.dir/vf_convolve.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/vf_convolve.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_jacobian.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/vf_jacobian.cxx.o -MF CMakeFiles/plmbase.dir/vf_jacobian.cxx.o.d -o CMakeFiles/plmbase.dir/vf_jacobian.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/vf_jacobian.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_stats.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/vf_stats.cxx.o -MF CMakeFiles/plmbase.dir/vf_stats.cxx.o.d -o CMakeFiles/plmbase.dir/vf_stats.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/vf_stats.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume.cxx.o -MF CMakeFiles/plmbase.dir/volume.cxx.o.d -o CMakeFiles/plmbase.dir/volume.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o -MF CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o.d -o CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_boundary_behavior.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_conv.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_conv.cxx.o -MF CMakeFiles/plmbase.dir/volume_conv.cxx.o.d -o CMakeFiles/plmbase.dir/volume_conv.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_conv.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_fill.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_fill.cxx.o -MF CMakeFiles/plmbase.dir/volume_fill.cxx.o.d -o CMakeFiles/plmbase.dir/volume_fill.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_fill.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_gaussian.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_gaussian.cxx.o -MF CMakeFiles/plmbase.dir/volume_gaussian.cxx.o.d -o CMakeFiles/plmbase.dir/volume_gaussian.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_gaussian.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_grad.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_grad.cxx.o -MF CMakeFiles/plmbase.dir/volume_grad.cxx.o.d -o CMakeFiles/plmbase.dir/volume_grad.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_grad.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_header.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_header.cxx.o -MF CMakeFiles/plmbase.dir/volume_header.cxx.o.d -o CMakeFiles/plmbase.dir/volume_header.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_header.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_limit.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_limit.cxx.o -MF CMakeFiles/plmbase.dir/volume_limit.cxx.o.d -o CMakeFiles/plmbase.dir/volume_limit.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_limit.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_resample.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_resample.cxx.o -MF CMakeFiles/plmbase.dir/volume_resample.cxx.o.d -o CMakeFiles/plmbase.dir/volume_resample.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_resample.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_stats.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_stats.cxx.o -MF CMakeFiles/plmbase.dir/volume_stats.cxx.o.d -o CMakeFiles/plmbase.dir/volume_stats.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/volume_stats.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xform.cxx.o -MF CMakeFiles/plmbase.dir/xform.cxx.o.d -o CMakeFiles/plmbase.dir/xform.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_convert.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xform_convert.cxx.o -MF CMakeFiles/plmbase.dir/xform_convert.cxx.o.d -o CMakeFiles/plmbase.dir/xform_convert.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_convert.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_legacy.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xform_legacy.cxx.o -MF CMakeFiles/plmbase.dir/xform_legacy.cxx.o.d -o CMakeFiles/plmbase.dir/xform_legacy.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_point.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xform_point.cxx.o -MF CMakeFiles/plmbase.dir/xform_point.cxx.o.d -o CMakeFiles/plmbase.dir/xform_point.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_point.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct.cxx.o -MF CMakeFiles/plmbase.dir/xio_ct.cxx.o.d -o CMakeFiles/plmbase.dir/xio_ct.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_ct.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o -MF CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o.d -o CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_ct_transform.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_demographic.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_demographic.cxx.o -MF CMakeFiles/plmbase.dir/xio_demographic.cxx.o.d -o CMakeFiles/plmbase.dir/xio_demographic.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_demographic.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function ‘void xform_legacy_save_itk_bsp(itk::BSplineDeformableTransform::Pointer, const char*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:230:40: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘itk::Transform::NumberOfParametersType’ {aka ‘long unsigned int’} [-Wformat=] 230 | printf (" # of parameters=%d\n", transform->GetBulkTransform()->GetNumberOfParameters()); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int itk::Transform::NumberOfParametersType {aka long unsigned int} | %ld [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dir.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dir.cxx.o -MF CMakeFiles/plmbase.dir/xio_dir.cxx.o.d -o CMakeFiles/plmbase.dir/xio_dir.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dir.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dose.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dose.cxx.o -MF CMakeFiles/plmbase.dir/xio_dose.cxx.o.d -o CMakeFiles/plmbase.dir/xio_dose.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_patient.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_patient.cxx.o -MF CMakeFiles/plmbase.dir/xio_patient.cxx.o.d -o CMakeFiles/plmbase.dir/xio_patient.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_patient.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function ‘void xform_legacy_load(Xform*, FILE*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:37:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 37 | fgets (buf,1024,fp); | ~~~~~~^~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:99:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 99 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:100:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 100 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:103:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 103 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:141:18: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 141 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:150:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 150 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:156:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 156 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xform_legacy.cxx:168:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 168 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_plan.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_plan.cxx.o -MF CMakeFiles/plmbase.dir/xio_plan.cxx.o.d -o CMakeFiles/plmbase.dir/xio_plan.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_plan.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_structures.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_structures.cxx.o -MF CMakeFiles/plmbase.dir/xio_structures.cxx.o.d -o CMakeFiles/plmbase.dir/xio_structures.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_studyset.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_studyset.cxx.o -MF CMakeFiles/plmbase.dir/xio_studyset.cxx.o.d -o CMakeFiles/plmbase.dir/xio_studyset.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_studyset.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xpm.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xpm.cxx.o -MF CMakeFiles/plmbase.dir/xpm.cxx.o.d -o CMakeFiles/plmbase.dir/xpm.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xpm.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_file.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_file.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_file.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_file.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_file.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_image.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_image.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_image.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_image.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_image.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_metadata.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_module.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_module.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_module.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_module.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_module.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx: In function ‘void xio_dose_load_header(Xio_dose_header*, const char*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:73:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 73 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:82:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 82 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:86:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 86 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:90:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 90 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:101:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:106:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 106 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:117:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 117 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:120:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 120 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_dose.cxx:135:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 135 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rdd.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx: In function ‘void add_cms_structure(Rtss*, const Xio_studyset&, const char*, float)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:120:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 120 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:121:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 121 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:122:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 122 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:123:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 123 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:124:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 124 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:134:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 134 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:141:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 141 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/xio_structures.cxx:180:19: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 180 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtdose.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtss.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rt_study.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_series.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_series.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_series.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_series.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_series.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_sro.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx: In member function ‘void Dcmtk_rt_study::rt_ion_plan_load()’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx:101:30: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 101 | printf (">> Num beams = %d\n", num_beams); | ~^ ~~~~~~~~~ | | | | int long unsigned int | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx:142:35: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 142 | printf (">> Adding beam (%d cp)\n", num_cp); | ~^ ~~~~~~ | | | | int long unsigned int | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx:208:37: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long int’ [-Wformat=] 208 | printf (">> Adding cp (%d spots)\n", num_spots); | ~^ ~~~~~~~~~ | | | | int long int | %ld [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_uid.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_util.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_util.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_util.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_util.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/dcmtk_util.cxx [ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmbase_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nkidecompress -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o -MF CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o.d -o CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/ray_trace_exact.cxx [ 40%] Linking CXX shared library ../../../libplmbase.so cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmbase.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmbase.so.1.9 -o ../../../libplmbase.so.1.9 CMakeFiles/plmbase.dir/aperture.cxx.o CMakeFiles/plmbase.dir/astroid_dose.cxx.o CMakeFiles/plmbase.dir/beam_geometry.cxx.o CMakeFiles/plmbase.dir/bspline_header.cxx.o CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o CMakeFiles/plmbase.dir/bspline_warp.cxx.o CMakeFiles/plmbase.dir/bspline_xform.cxx.o CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o CMakeFiles/plmbase.dir/cxt_extract.cxx.o CMakeFiles/plmbase.dir/cxt_io.cxx.o CMakeFiles/plmbase.dir/dicom_probe.cxx.o CMakeFiles/plmbase.dir/dicom_util.cxx.o CMakeFiles/plmbase.dir/direction_cosines.cxx.o CMakeFiles/plmbase.dir/direction_matrices.cxx.o CMakeFiles/plmbase.dir/exchkeys.cxx.o CMakeFiles/plmbase.dir/float_pair_list.cxx.o CMakeFiles/plmbase.dir/gaussian.cxx.o CMakeFiles/plmbase.dir/hnd_io.cxx.o CMakeFiles/plmbase.dir/image_stats.cxx.o CMakeFiles/plmbase.dir/interpolate.cxx.o CMakeFiles/plmbase.dir/itk_bbox.cxx.o CMakeFiles/plmbase.dir/itk_directions.cxx.o CMakeFiles/plmbase.dir/itk_image.cxx.o CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o CMakeFiles/plmbase.dir/itk_image_cast.cxx.o CMakeFiles/plmbase.dir/itk_image_clone.cxx.o CMakeFiles/plmbase.dir/itk_image_create.cxx.o CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o CMakeFiles/plmbase.dir/itk_image_origin.cxx.o CMakeFiles/plmbase.dir/itk_image_region.cxx.o CMakeFiles/plmbase.dir/itk_image_save.cxx.o CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o CMakeFiles/plmbase.dir/itk_image_stats.cxx.o CMakeFiles/plmbase.dir/itk_metadata.cxx.o CMakeFiles/plmbase.dir/itk_pointset.cxx.o CMakeFiles/plmbase.dir/itk_resample.cxx.o CMakeFiles/plmbase.dir/itk_volume_header.cxx.o CMakeFiles/plmbase.dir/itk_warp.cxx.o CMakeFiles/plmbase.dir/mc_dose.cxx.o CMakeFiles/plmbase.dir/metadata.cxx.o CMakeFiles/plmbase.dir/mha_io.cxx.o CMakeFiles/plmbase.dir/nki_io.cxx.o CMakeFiles/plmbase.dir/parameter_parser.cxx.o CMakeFiles/plmbase.dir/plm_file_format.cxx.o CMakeFiles/plmbase.dir/plm_image.cxx.o CMakeFiles/plmbase.dir/plm_image_convert.cxx.o CMakeFiles/plmbase.dir/plm_image_header.cxx.o CMakeFiles/plmbase.dir/plm_image_set.cxx.o CMakeFiles/plmbase.dir/plm_image_type.cxx.o CMakeFiles/plmbase.dir/plm_warp.cxx.o CMakeFiles/plmbase.dir/pointset.cxx.o CMakeFiles/plmbase.dir/pointset_warp.cxx.o CMakeFiles/plmbase.dir/proj_image.cxx.o CMakeFiles/plmbase.dir/proj_image_dir.cxx.o CMakeFiles/plmbase.dir/proj_matrix.cxx.o CMakeFiles/plmbase.dir/proj_volume.cxx.o CMakeFiles/plmbase.dir/pwlut.cxx.o CMakeFiles/plmbase.dir/rasterize_slice.cxx.o CMakeFiles/plmbase.dir/rasterizer.cxx.o CMakeFiles/plmbase.dir/raw_pointset.cxx.o CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o CMakeFiles/plmbase.dir/rpl_volume.cxx.o CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o CMakeFiles/plmbase.dir/rt_study.cxx.o CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o CMakeFiles/plmbase.dir/rtog_io.cxx.o CMakeFiles/plmbase.dir/rtss.cxx.o CMakeFiles/plmbase.dir/rtss_contour.cxx.o CMakeFiles/plmbase.dir/rtss_roi.cxx.o CMakeFiles/plmbase.dir/rtplan.cxx.o CMakeFiles/plmbase.dir/rtplan_beam.cxx.o CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o CMakeFiles/plmbase.dir/segmentation.cxx.o CMakeFiles/plmbase.dir/slice_extract.cxx.o CMakeFiles/plmbase.dir/slice_list.cxx.o CMakeFiles/plmbase.dir/ss_img_extract.cxx.o CMakeFiles/plmbase.dir/ss_list_io.cxx.o CMakeFiles/plmbase.dir/threading.cxx.o CMakeFiles/plmbase.dir/thumbnail.cxx.o CMakeFiles/plmbase.dir/vf.cxx.o CMakeFiles/plmbase.dir/vf_convolve.cxx.o CMakeFiles/plmbase.dir/vf_jacobian.cxx.o CMakeFiles/plmbase.dir/vf_stats.cxx.o CMakeFiles/plmbase.dir/volume.cxx.o CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o CMakeFiles/plmbase.dir/volume_conv.cxx.o CMakeFiles/plmbase.dir/volume_fill.cxx.o CMakeFiles/plmbase.dir/volume_gaussian.cxx.o CMakeFiles/plmbase.dir/volume_grad.cxx.o CMakeFiles/plmbase.dir/volume_header.cxx.o CMakeFiles/plmbase.dir/volume_limit.cxx.o CMakeFiles/plmbase.dir/volume_resample.cxx.o CMakeFiles/plmbase.dir/volume_stats.cxx.o CMakeFiles/plmbase.dir/xform.cxx.o CMakeFiles/plmbase.dir/xform_convert.cxx.o CMakeFiles/plmbase.dir/xform_legacy.cxx.o CMakeFiles/plmbase.dir/xform_point.cxx.o CMakeFiles/plmbase.dir/xio_ct.cxx.o CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o CMakeFiles/plmbase.dir/xio_demographic.cxx.o CMakeFiles/plmbase.dir/xio_dir.cxx.o CMakeFiles/plmbase.dir/xio_dose.cxx.o CMakeFiles/plmbase.dir/xio_patient.cxx.o CMakeFiles/plmbase.dir/xio_plan.cxx.o CMakeFiles/plmbase.dir/xio_structures.cxx.o CMakeFiles/plmbase.dir/xio_studyset.cxx.o CMakeFiles/plmbase.dir/xpm.cxx.o CMakeFiles/plmbase.dir/dcmtk_file.cxx.o CMakeFiles/plmbase.dir/dcmtk_image.cxx.o CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o CMakeFiles/plmbase.dir/dcmtk_module.cxx.o CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o CMakeFiles/plmbase.dir/dcmtk_series.cxx.o CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o CMakeFiles/plmbase.dir/dcmtk_util.cxx.o CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libnkidecompress.a ../../../libplmsys.so.1.9 /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm -lpthread -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/cmake -E cmake_symlink_library ../../../libplmbase.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmbase.so make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 40%] Built target plmbase make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util/CMakeFiles/plmutil.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 40%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o [ 40%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/distance_map.cxx.o [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/bspline_correspond.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/distance_map.cxx.o -MF CMakeFiles/plmutil.dir/distance_map.cxx.o.d -o CMakeFiles/plmutil.dir/distance_map.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/distance_map.cxx [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dvh.cxx.o [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/bspline_correspond.cxx.o -MF CMakeFiles/plmutil.dir/bspline_correspond.cxx.o.d -o CMakeFiles/plmutil.dir/bspline_correspond.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/bspline_correspond.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o -MF CMakeFiles/plmutil.dir/dice_statistics.cxx.o.d -o CMakeFiles/plmutil.dir/dice_statistics.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/dice_statistics.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o -MF CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o.d -o CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/dicom_sro_save.cxx [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_boundary.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/dvh.cxx.o -MF CMakeFiles/plmutil.dir/dvh.cxx.o.d -o CMakeFiles/plmutil.dir/dvh.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/dvh.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o -MF CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o.d -o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/gamma_dose_comparison.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -MF CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o.d -o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/hausdorff_distance.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/image_boundary.cxx.o -MF CMakeFiles/plmutil.dir/image_boundary.cxx.o.d -o CMakeFiles/plmutil.dir/image_boundary.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/image_boundary.cxx [ 42%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/geometry_chooser.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/geometry_chooser.cxx.o -MF CMakeFiles/plmutil.dir/geometry_chooser.cxx.o.d -o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/geometry_chooser.cxx [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/diff.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/diff.cxx.o -MF CMakeFiles/plmutil.dir/diff.cxx.o.d -o CMakeFiles/plmutil.dir/diff.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/diff.cxx [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_center.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/image_center.cxx.o -MF CMakeFiles/plmutil.dir/image_center.cxx.o.d -o CMakeFiles/plmutil.dir/image_center.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/image_center.cxx [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_adjust.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_adjust.cxx.o -MF CMakeFiles/plmutil.dir/itk_adjust.cxx.o.d -o CMakeFiles/plmutil.dir/itk_adjust.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_adjust.cxx [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_crop.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_crop.cxx.o -MF CMakeFiles/plmutil.dir/itk_crop.cxx.o.d -o CMakeFiles/plmutil.dir/itk_crop.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_crop.cxx [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_distance_map.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_distance_map.cxx.o -MF CMakeFiles/plmutil.dir/itk_distance_map.cxx.o.d -o CMakeFiles/plmutil.dir/itk_distance_map.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_distance_map.cxx [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_gabor.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_gabor.cxx.o -MF CMakeFiles/plmutil.dir/itk_gabor.cxx.o.d -o CMakeFiles/plmutil.dir/itk_gabor.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_gabor.cxx [ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o -MF CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o.d -o CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_histogram_matching.cxx [ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_intersect.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_intersect.cxx.o -MF CMakeFiles/plmutil.dir/itk_intersect.cxx.o.d -o CMakeFiles/plmutil.dir/itk_intersect.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_intersect.cxx [ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o -MF CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o.d -o CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_local_intensity_correction.cxx [ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_mask.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_mask.cxx.o -MF CMakeFiles/plmutil.dir/itk_mask.cxx.o.d -o CMakeFiles/plmutil.dir/itk_mask.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_mask.cxx [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_scale.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_scale.cxx.o -MF CMakeFiles/plmutil.dir/itk_scale.cxx.o.d -o CMakeFiles/plmutil.dir/itk_scale.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_scale.cxx [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_threshold.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_threshold.cxx.o -MF CMakeFiles/plmutil.dir/itk_threshold.cxx.o.d -o CMakeFiles/plmutil.dir/itk_threshold.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_threshold.cxx [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_union.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_union.cxx.o -MF CMakeFiles/plmutil.dir/itk_union.cxx.o.d -o CMakeFiles/plmutil.dir/itk_union.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/itk_union.cxx [ 46%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/landmark_diff.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/landmark_diff.cxx.o -MF CMakeFiles/plmutil.dir/landmark_diff.cxx.o.d -o CMakeFiles/plmutil.dir/landmark_diff.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/landmark_diff.cxx [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/proj_image_filter.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/proj_image_filter.cxx.o -MF CMakeFiles/plmutil.dir/proj_image_filter.cxx.o.d -o CMakeFiles/plmutil.dir/proj_image_filter.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/proj_image_filter.cxx [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/plm_series.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/plm_series.cxx.o -MF CMakeFiles/plmutil.dir/plm_series.cxx.o.d -o CMakeFiles/plmutil.dir/plm_series.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/plm_series.cxx [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/plm_study.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/plm_study.cxx.o -MF CMakeFiles/plmutil.dir/plm_study.cxx.o.d -o CMakeFiles/plmutil.dir/plm_study.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/plm_study.cxx [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/rt_study_warp.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/rt_study_warp.cxx.o -MF CMakeFiles/plmutil.dir/rt_study_warp.cxx.o.d -o CMakeFiles/plmutil.dir/rt_study_warp.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/rt_study_warp.cxx [ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/sift.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/sift.cxx.o -MF CMakeFiles/plmutil.dir/sift.cxx.o.d -o CMakeFiles/plmutil.dir/sift.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/sift.cxx [ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/simplify_points.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/simplify_points.cxx.o -MF CMakeFiles/plmutil.dir/simplify_points.cxx.o.d -o CMakeFiles/plmutil.dir/simplify_points.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/simplify_points.cxx [ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ss_img_stats.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/ss_img_stats.cxx.o -MF CMakeFiles/plmutil.dir/ss_img_stats.cxx.o.d -o CMakeFiles/plmutil.dir/ss_img_stats.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/ss_img_stats.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_mha.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_mha.cxx.o -MF CMakeFiles/plmutil.dir/synthetic_mha.cxx.o.d -o CMakeFiles/plmutil.dir/synthetic_mha.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/synthetic_mha.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_vf.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_vf.cxx.o -MF CMakeFiles/plmutil.dir/synthetic_vf.cxx.o.d -o CMakeFiles/plmutil.dir/synthetic_vf.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/synthetic_vf.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/threshbox.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/threshbox.cxx.o -MF CMakeFiles/plmutil.dir/threshbox.cxx.o.d -o CMakeFiles/plmutil.dir/threshbox.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/volume_adjust.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/volume_adjust.cxx.o -MF CMakeFiles/plmutil.dir/volume_adjust.cxx.o.d -o CMakeFiles/plmutil.dir/volume_adjust.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/volume_adjust.cxx [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o -MF CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o.d -o CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/volume_boundary_type.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx: In function ‘void do_overlap_fraction(Threshbox_parms*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx:257:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 257 | fscanf(fp1, "%s", tmpbuf); | ~~~~~~^~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx:258:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 258 | fscanf(fp1, "%f %f %f", &phys_max1[0], &phys_max1[1], &phys_max1[2]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx:266:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 266 | fscanf(fp2, "%s", tmpbuf); | ~~~~~~^~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/threshbox.cxx:267:15: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 267 | fscanf(fp2, "%f %f %f", &phys_max2[0], &phys_max2[1], &phys_max2[2]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/xf_invert.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/xf_invert.cxx.o -MF CMakeFiles/plmutil.dir/xf_invert.cxx.o.d -o CMakeFiles/plmutil.dir/xf_invert.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/xf_invert.cxx [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/zcrop.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/zcrop.cxx.o -MF CMakeFiles/plmutil.dir/zcrop.cxx.o.d -o CMakeFiles/plmutil.dir/zcrop.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/zcrop.cxx [ 50%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/gabor.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/gabor.cxx.o -MF CMakeFiles/plmutil.dir/gabor.cxx.o.d -o CMakeFiles/plmutil.dir/gabor.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/gabor.cxx [ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmutil_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o -MF CMakeFiles/plmutil.dir/ramp_filter.cxx.o.d -o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/ramp_filter.cxx [ 51%] Linking CXX shared library ../../../libplmutil.so cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmutil.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmutil.so.1.9 -o ../../../libplmutil.so.1.9 CMakeFiles/plmutil.dir/bspline_correspond.cxx.o CMakeFiles/plmutil.dir/dice_statistics.cxx.o CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o CMakeFiles/plmutil.dir/distance_map.cxx.o CMakeFiles/plmutil.dir/diff.cxx.o CMakeFiles/plmutil.dir/dvh.cxx.o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o CMakeFiles/plmutil.dir/image_boundary.cxx.o CMakeFiles/plmutil.dir/image_center.cxx.o CMakeFiles/plmutil.dir/itk_adjust.cxx.o CMakeFiles/plmutil.dir/itk_crop.cxx.o CMakeFiles/plmutil.dir/itk_distance_map.cxx.o CMakeFiles/plmutil.dir/itk_gabor.cxx.o CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o CMakeFiles/plmutil.dir/itk_intersect.cxx.o CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o CMakeFiles/plmutil.dir/itk_mask.cxx.o CMakeFiles/plmutil.dir/itk_scale.cxx.o CMakeFiles/plmutil.dir/itk_threshold.cxx.o CMakeFiles/plmutil.dir/itk_union.cxx.o CMakeFiles/plmutil.dir/landmark_diff.cxx.o CMakeFiles/plmutil.dir/proj_image_filter.cxx.o CMakeFiles/plmutil.dir/plm_series.cxx.o CMakeFiles/plmutil.dir/plm_study.cxx.o CMakeFiles/plmutil.dir/rt_study_warp.cxx.o CMakeFiles/plmutil.dir/sift.cxx.o CMakeFiles/plmutil.dir/simplify_points.cxx.o CMakeFiles/plmutil.dir/ss_img_stats.cxx.o CMakeFiles/plmutil.dir/synthetic_mha.cxx.o CMakeFiles/plmutil.dir/synthetic_vf.cxx.o CMakeFiles/plmutil.dir/threshbox.cxx.o CMakeFiles/plmutil.dir/volume_adjust.cxx.o CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o CMakeFiles/plmutil.dir/xf_invert.cxx.o CMakeFiles/plmutil.dir/zcrop.cxx.o CMakeFiles/plmutil.dir/gabor.cxx.o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include -lfftw3f -lfftw3 ../../../libdevillard.a ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lnsl -lblas -llapack -lsqlite3 /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lpng -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 -lz -ljpeg /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -ldl /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -lm ../../../libnkidecompress.a cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/cmake -E cmake_symlink_library ../../../libplmutil.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmutil.so make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 51%] Built target plmutil make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/depend make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/depend make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose/CMakeFiles/plmdose.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register/CMakeFiles/plmregister.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 51%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/build cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -MF CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_landmarks.cxx make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 51%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline.cxx.o [ 51%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_gm.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -msse2 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline.cxx.o -MF CMakeFiles/plmregister.dir/bspline.cxx.o.d -o CMakeFiles/plmregister.dir/bspline.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -msse2 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_gm.cxx.o -MF CMakeFiles/plmregister.dir/bspline_gm.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_gm.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_gm.cxx [ 51%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o [ 52%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_optimize_liblbfgs.cxx [ 52%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -msse2 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o -MF CMakeFiles/plmregister.dir/bspline_mse.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_mse.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_mse.cxx [ 53%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mi.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_optimize.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -msse2 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mi.cxx.o -MF CMakeFiles/plmregister.dir/bspline_mi.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_mi.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_mi.cxx [ 53%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o [ 53%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -MF CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o.d -o CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/bowtie_correction.cxx [ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_calc.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_optimize_lbfgsb.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_calc.cxx.o -MF CMakeFiles/plmdose.dir/beam_calc.cxx.o.d -o CMakeFiles/plmdose.dir/beam_calc.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/beam_calc.cxx [ 54%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_optimize_nlopt.cxx [ 54%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_optimize_steepest.cxx [ 55%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o -MF CMakeFiles/plmregister.dir/bspline_parms.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_parms.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_parms.cxx [ 55%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o -MF CMakeFiles/plmregister.dir/bspline_score.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_score.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_score.cxx [ 55%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o -MF CMakeFiles/plmregister.dir/bspline_stage.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_stage.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_stage.cxx [ 55%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o -MF CMakeFiles/plmregister.dir/bspline_state.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_state.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_state.cxx [ 56%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_regularize.cxx [ 56%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_regularize_analytic.cxx [ 56%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_regularize_numeric.cxx [ 56%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/drr.cxx [ 56%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/bspline_regularize_semi_analytic.cxx [ 57%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/demons.cxx.o -MF CMakeFiles/plmregister.dir/demons.cxx.o.d -o CMakeFiles/plmregister.dir/demons.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/demons.cxx [ 57%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons_cpu.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/demons_cpu.cxx.o -MF CMakeFiles/plmregister.dir/demons_cpu.cxx.o.d -o CMakeFiles/plmregister.dir/demons_cpu.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/demons_cpu.cxx [ 57%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons_state.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/demons_state.cxx.o -MF CMakeFiles/plmregister.dir/demons_state.cxx.o.d -o CMakeFiles/plmregister.dir/demons_state.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/demons_state.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/beam_calc.cxx: In member function ‘bool Beam_calc::load(const char*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/beam_calc.cxx:194:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 194 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ [ 57%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/gpuit_demons.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/gpuit_demons.cxx.o -MF CMakeFiles/plmregister.dir/gpuit_demons.cxx.o.d -o CMakeFiles/plmregister.dir/gpuit_demons.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/gpuit_demons.cxx [ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/groupwise_parms.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -MF CMakeFiles/plmregister.dir/groupwise_parms.cxx.o.d -o CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/groupwise_parms.cxx [ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/histogram.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/histogram.cxx.o -MF CMakeFiles/plmregister.dir/histogram.cxx.o.d -o CMakeFiles/plmregister.dir/histogram.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/histogram.cxx [ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o -MF CMakeFiles/plmregister.dir/itk_align_center.cxx.o.d -o CMakeFiles/plmregister.dir/itk_align_center.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_align_center.cxx [ 58%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_map.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_map.cxx.o -MF CMakeFiles/plmdose.dir/beam_map.cxx.o.d -o CMakeFiles/plmdose.dir/beam_map.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/beam_map.cxx [ 58%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o -MF CMakeFiles/plmdose.dir/bragg_curve.cxx.o.d -o CMakeFiles/plmdose.dir/bragg_curve.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/bragg_curve.cxx [ 58%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/compute_dose.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/compute_dose.cxx.o -MF CMakeFiles/plmdose.dir/compute_dose.cxx.o.d -o CMakeFiles/plmdose.dir/compute_dose.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/compute_dose.cxx [ 59%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o -MF CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o.d -o CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/dose_volume_functions.cxx [ 59%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/particle_type.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/particle_type.cxx.o -MF CMakeFiles/plmdose.dir/particle_type.cxx.o.d -o CMakeFiles/plmdose.dir/particle_type.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/particle_type.cxx [ 59%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_beam_model.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_beam_model.cxx.o -MF CMakeFiles/plmdose.dir/rt_beam_model.cxx.o.d -o CMakeFiles/plmdose.dir/rt_beam_model.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_beam_model.cxx [ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_demons.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons.cxx [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons_util.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons_util.cxx.o -MF CMakeFiles/plmregister.dir/itk_demons_util.cxx.o.d -o CMakeFiles/plmregister.dir/itk_demons_util.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons_util.cxx [ 60%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o -MF CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o.d -o CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx [ 61%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_dij.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_dij.cxx.o -MF CMakeFiles/plmdose.dir/rt_dij.cxx.o.d -o CMakeFiles/plmdose.dir/rt_dij.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_dij.cxx [ 61%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_lut.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_lut.cxx.o -MF CMakeFiles/plmdose.dir/rt_lut.cxx.o.d -o CMakeFiles/plmdose.dir/rt_lut.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_lut.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function ‘bool Rt_depth_dose::load(const char*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:64:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 64 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function ‘bool Rt_depth_dose::load_xio(const char*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:86:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 86 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:90:11: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 90 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:103:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 103 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:114:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 114 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:125:15: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 125 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ [ 61%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_spot_map.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_spot_map.cxx.o -MF CMakeFiles/plmdose.dir/rt_spot_map.cxx.o.d -o CMakeFiles/plmdose.dir/rt_spot_map.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_spot_map.cxx [ 62%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_options.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_options.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr_options.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr_options.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/drr_options.cxx [ 62%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/drr_trilin.cxx [ 62%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o -MF CMakeFiles/plmreconstruct.dir/fdk.cxx.o.d -o CMakeFiles/plmreconstruct.dir/fdk.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/fdk.cxx [ 62%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmreconstruct_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -MF CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o.d -o CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/fdk_util.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_log_demons.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_log_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_log_demons.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_dij.cxx: In member function ‘void Rt_dij::dump(const string&) const’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_dij.cxx:51:28: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long unsigned int’ [-Wformat=] 51 | fprintf (fp, "%d %f\n", c->index, c->dose); | ~^ ~~~~~~~~ | | | | int long unsigned int | %ld [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx [ 63%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_mebs.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_mebs.cxx.o -MF CMakeFiles/plmdose.dir/rt_mebs.cxx.o.d -o CMakeFiles/plmdose.dir/rt_mebs.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_mebs.cxx [ 64%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o -MF CMakeFiles/plmdose.dir/rt_parms.cxx.o.d -o CMakeFiles/plmdose.dir/rt_parms.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_parms.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_optimizer.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_optimizer.cxx.o -MF CMakeFiles/plmregister.dir/itk_optimizer.cxx.o.d -o CMakeFiles/plmregister.dir/itk_optimizer.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_optimizer.cxx [ 65%] Linking CXX shared library ../../../libplmreconstruct.so cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmreconstruct.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmreconstruct.so.1.9 -o ../../../libplmreconstruct.so.1.9 CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o CMakeFiles/plmreconstruct.dir/drr.cxx.o CMakeFiles/plmreconstruct.dir/drr_options.cxx.o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o CMakeFiles/plmreconstruct.dir/fdk.cxx.o CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lsz -ldl -lm -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm ../../../libnkidecompress.a -lpthread -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 ../../../libdevillard.a [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration.cxx.o -MF CMakeFiles/plmregister.dir/itk_registration.cxx.o.d -o CMakeFiles/plmregister.dir/itk_registration.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_registration.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/cmake -E cmake_symlink_library ../../../libplmreconstruct.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmreconstruct.so make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 65%] Built target plmreconstruct [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o -MF CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o.d -o CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_registration_observer.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_mebs.cxx: In member function ‘void Rt_mebs::load_beamlet_map(Aperture::Pointer&)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1129:52: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 1129 | printf("beamlet line number expected: %d, beamlet line detected: %d.\n", ap->get_dim(1), line_number); | ~^ ~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1180:56: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 1180 | printf("line %d: beamlet number expected: %d, beamlet number detected: %d.\n", line_number, ap->get_dim(0), beamlet_number); | ~^ ~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1189:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 1189 | printf("beamlet line number expected: %d, beamlet line detected: %d.\n", ap->get_dim(1), line_number); | ~^ ~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_mebs.cxx: In member function ‘void Rt_mebs::compute_particle_number_matrix_from_target_active(Rpl_volume*, std::vector&, std::vector&)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1213:33: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 1213 | printf("Aperture size: %d, min depth map size: %d, max depth map size: %d.\n", rpl_vol->get_aperture()->get_dim(0) * rpl_vol->get_aperture()->get_dim(1), (int) wepl_min.size(), (int) wepl_max.size()); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_mebs.cxx: In member function ‘void Rt_mebs::export_as_txt(const string&, Aperture::Pointer)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1385:18: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 1385 | printf ("Ap %d %d\n", ap->get_dim(0), ap->get_dim(1)); | ~^ ~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1385:21: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 1385 | printf ("Ap %d %d\n", ap->get_dim(0), ap->get_dim(1)); | ~^ ~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:5, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons_types.h:14, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_log_demons.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_log_demons.cxx:5: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx: In instantiation of ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>; itk::ESMDemonsRegistrationWithMaskFunction::PixelType = itk::Vector; itk::ESMDemonsRegistrationWithMaskFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::ESMDemonsRegistrationWithMaskFunction::FloatOffsetType = itk::Vector]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:228:1: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:279:51: warning: ‘bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const string&) const [with unsigned int VDimension = 3; itk::SpatialObject::PointType = itk::Point; std::string = std::__cxx11::basic_string]’ is deprecated [-Wdeprecated-declarations] 279 | if ( !this->GetMovingImageMask()->IsInside(mappedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkLightObject.h:21, from /usr/include/ITK-5.2/itkObject.h:31, from /usr/include/ITK-5.2/itkRegion.h:31, from /usr/include/ITK-5.2/itkImageRegion.h:31, from /usr/include/ITK-5.2/itkImage.h:21, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons_types.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_log_demons.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_log_demons.cxx:5: /usr/include/ITK-5.2/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:5, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons_types.h:14, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_log_demons.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_log_demons.cxx:5: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:288:50: warning: ‘bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const string&) const [with unsigned int VDimension = 3; itk::SpatialObject::PointType = itk::Point; std::string = std::__cxx11::basic_string]’ is deprecated [-Wdeprecated-declarations] 288 | if ( !this->GetFixedImageMask()->IsInside(fixedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkLightObject.h:21, from /usr/include/ITK-5.2/itkObject.h:31, from /usr/include/ITK-5.2/itkRegion.h:31, from /usr/include/ITK-5.2/itkImageRegion.h:31, from /usr/include/ITK-5.2/itkImage.h:21, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons_types.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_log_demons.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_log_demons.cxx:5: /usr/include/ITK-5.2/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ [ 66%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/plan_calc.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/plan_calc.cxx.o -MF CMakeFiles/plmdose.dir/plan_calc.cxx.o.d -o CMakeFiles/plmdose.dir/plan_calc.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons/itkDiffeomorphicDemonsRegistrationWithMaskFilter.h:22, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_diff_demons.h:7, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx:5: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx: In instantiation of ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>; itk::ESMDemonsRegistrationWithMaskFunction::PixelType = itk::Vector; itk::ESMDemonsRegistrationWithMaskFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::ESMDemonsRegistrationWithMaskFunction::FloatOffsetType = itk::Vector]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:228:1: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:279:51: warning: ‘bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const string&) const [with unsigned int VDimension = 3; itk::SpatialObject::PointType = itk::Point; std::string = std::__cxx11::basic_string]’ is deprecated [-Wdeprecated-declarations] 279 | if ( !this->GetMovingImageMask()->IsInside(mappedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkLightObject.h:21, from /usr/include/ITK-5.2/itkObject.h:31, from /usr/include/ITK-5.2/itkDataObject.h:31, from /usr/include/ITK-5.2/itkProcessObject.h:31, from /usr/include/ITK-5.2/itkImageSource.h:31, from /usr/include/ITK-5.2/itkImageToImageFilter.h:31, from /usr/include/ITK-5.2/itkInPlaceImageFilter.h:31, from /usr/include/ITK-5.2/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-5.2/itkDenseFiniteDifferenceImageFilter.h:21, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkPDEDeformableRegistrationWithMaskFilter.h:20, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons/itkDiffeomorphicDemonsRegistrationWithMaskFilter.h:21, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_diff_demons.h:7, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx:5: /usr/include/ITK-5.2/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons/itkDiffeomorphicDemonsRegistrationWithMaskFilter.h:22, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_diff_demons.h:7, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx:5: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:288:50: warning: ‘bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const string&) const [with unsigned int VDimension = 3; itk::SpatialObject::PointType = itk::Point; std::string = std::__cxx11::basic_string]’ is deprecated [-Wdeprecated-declarations] 288 | if ( !this->GetFixedImageMask()->IsInside(fixedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkLightObject.h:21, from /usr/include/ITK-5.2/itkObject.h:31, from /usr/include/ITK-5.2/itkDataObject.h:31, from /usr/include/ITK-5.2/itkProcessObject.h:31, from /usr/include/ITK-5.2/itkImageSource.h:31, from /usr/include/ITK-5.2/itkImageToImageFilter.h:31, from /usr/include/ITK-5.2/itkInPlaceImageFilter.h:31, from /usr/include/ITK-5.2/itkFiniteDifferenceImageFilter.h:21, from /usr/include/ITK-5.2/itkDenseFiniteDifferenceImageFilter.h:21, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkPDEDeformableRegistrationWithMaskFilter.h:20, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons/itkDiffeomorphicDemonsRegistrationWithMaskFilter.h:21, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_diff_demons.h:7, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx:5: /usr/include/ITK-5.2/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_tps.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_tps.cxx.o -MF CMakeFiles/plmregister.dir/itk_tps.cxx.o.d -o CMakeFiles/plmregister.dir/itk_tps.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_tps.cxx In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:5, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons_types.h:14, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_sym_log_demons.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx: In instantiation of ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>; itk::ESMDemonsRegistrationWithMaskFunction::PixelType = itk::Vector; itk::ESMDemonsRegistrationWithMaskFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::ESMDemonsRegistrationWithMaskFunction::FloatOffsetType = itk::Vector]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:228:1: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:279:51: warning: ‘bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const string&) const [with unsigned int VDimension = 3; itk::SpatialObject::PointType = itk::Point; std::string = std::__cxx11::basic_string]’ is deprecated [-Wdeprecated-declarations] 279 | if ( !this->GetMovingImageMask()->IsInside(mappedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkLightObject.h:21, from /usr/include/ITK-5.2/itkObject.h:31, from /usr/include/ITK-5.2/itkRegion.h:31, from /usr/include/ITK-5.2/itkImageRegion.h:31, from /usr/include/ITK-5.2/itkImage.h:21, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons_types.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_sym_log_demons.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx:6: /usr/include/ITK-5.2/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:5, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons_types.h:14, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_sym_log_demons.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx:6: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:288:50: warning: ‘bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const string&) const [with unsigned int VDimension = 3; itk::SpatialObject::PointType = itk::Point; std::string = std::__cxx11::basic_string]’ is deprecated [-Wdeprecated-declarations] 288 | if ( !this->GetFixedImageMask()->IsInside(fixedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkLightObject.h:21, from /usr/include/ITK-5.2/itkObject.h:31, from /usr/include/ITK-5.2/itkRegion.h:31, from /usr/include/ITK-5.2/itkImageRegion.h:31, from /usr/include/ITK-5.2/itkImage.h:21, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_demons_types.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_sym_log_demons.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx:6: /usr/include/ITK-5.2/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces/itkFastSymmetricForcesDemonsRegistrationWithMaskFilter.h:22, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_fsf_demons.h:7, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:12: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx: In instantiation of ‘itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>; itk::ESMDemonsRegistrationWithMaskFunction::PixelType = itk::Vector; itk::ESMDemonsRegistrationWithMaskFunction::NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; itk::ESMDemonsRegistrationWithMaskFunction::FloatOffsetType = itk::Vector]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:228:1: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:279:51: warning: ‘bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const string&) const [with unsigned int VDimension = 3; itk::SpatialObject::PointType = itk::Point; std::string = std::__cxx11::basic_string]’ is deprecated [-Wdeprecated-declarations] 279 | if ( !this->GetMovingImageMask()->IsInside(mappedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkArray.h:21, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:8: /usr/include/ITK-5.2/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces/itkFastSymmetricForcesDemonsRegistrationWithMaskFilter.h:22, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_fsf_demons.h:7, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:12: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:288:50: warning: ‘bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const string&) const [with unsigned int VDimension = 3; itk::SpatialObject::PointType = itk::Point; std::string = std::__cxx11::basic_string]’ is deprecated [-Wdeprecated-declarations] 288 | if ( !this->GetFixedImageMask()->IsInside(fixedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkArray.h:21, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:8: /usr/include/ITK-5.2/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx: In member function ‘void Plan_calc::normalize_beam_dose(Beam_calc*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx:424:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 424 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx:424:52: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 424 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx:438:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 438 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx:438:52: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 438 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx:452:44: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 452 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx:452:48: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘plm_long’ {aka ‘long int’} [-Wformat=] 452 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx: In member function ‘void Plan_calc::print_verif()’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx:759:73: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long int’ [-Wformat=] 759 | printf("\n i_res: "); for (int i = 0; i < num_beams; i++) {printf("%d %d ** ", d_ptr->beam_storage[i]->get_aperture()->get_dim()[0], d_ptr->beam_storage[i]->get_aperture()->get_dim()[1]);} | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int long int | %ld /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/plan_calc.cxx:759:76: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long int’ [-Wformat=] 759 | printf("\n i_res: "); for (int i = 0; i < num_beams; i++) {printf("%d %d ** ", d_ptr->beam_storage[i]->get_aperture()->get_dim()[0], d_ptr->beam_storage[i]->get_aperture()->get_dim()[1]);} | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int long int | %ld [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/joint_histogram.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/joint_histogram.cxx.o -MF CMakeFiles/plmregister.dir/joint_histogram.cxx.o.d -o CMakeFiles/plmregister.dir/joint_histogram.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/joint_histogram.cxx [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/landmark_warp.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/landmark_warp.cxx.o -MF CMakeFiles/plmregister.dir/landmark_warp.cxx.o.d -o CMakeFiles/plmregister.dir/landmark_warp.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/landmark_warp.cxx [ 66%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o -MF CMakeFiles/plmdose.dir/rt_sigma.cxx.o.d -o CMakeFiles/plmdose.dir/rt_sigma.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/rt_sigma.cxx [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/metric_parms.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/metric_parms.cxx.o -MF CMakeFiles/plmregister.dir/metric_parms.cxx.o.d -o CMakeFiles/plmregister.dir/metric_parms.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/metric_parms.cxx [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/metric_state.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/metric_state.cxx.o -MF CMakeFiles/plmregister.dir/metric_state.cxx.o.d -o CMakeFiles/plmregister.dir/metric_state.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/metric_state.cxx [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/process_parms.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/process_parms.cxx.o -MF CMakeFiles/plmregister.dir/process_parms.cxx.o.d -o CMakeFiles/plmregister.dir/process_parms.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/process_parms.cxx [ 68%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmdose_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o -MF CMakeFiles/plmdose.dir/wed_parms.cxx.o.d -o CMakeFiles/plmdose.dir/wed_parms.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/wed_parms.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_cluster.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -MF CMakeFiles/plmregister.dir/rbf_cluster.cxx.o.d -o CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/rbf_cluster.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/wed_parms.cxx: In member function ‘int Wed_parms::set_key_val(const char*, const char*, int)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/wed_parms.cxx:237:32: warning: format ‘%i’ expects argument of type ‘int*’, but argument 3 has type ‘plm_long*’ {aka ‘long int*’} [-Wformat=] 237 | if (sscanf (val, "%i %i", | ~^ | | | int* | %li 238 | &(this->ires[0]), | ~~~~~~~~~~~~~~~~ | | | plm_long* {aka long int*} /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose/wed_parms.cxx:237:35: warning: format ‘%i’ expects argument of type ‘int*’, but argument 4 has type ‘plm_long*’ {aka ‘long int*’} [-Wformat=] 237 | if (sscanf (val, "%i %i", | ~^ | | | int* | %li 238 | &(this->ires[0]), 239 | &(this->ires[1])) != 2) | ~~~~~~~~~~~~~~~~ | | | plm_long* {aka long int*} [ 68%] Linking CXX shared library ../../../libplmdose.so cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmdose.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmdose.so.1.9 -o ../../../libplmdose.so.1.9 CMakeFiles/plmdose.dir/beam_calc.cxx.o CMakeFiles/plmdose.dir/beam_map.cxx.o CMakeFiles/plmdose.dir/bragg_curve.cxx.o CMakeFiles/plmdose.dir/compute_dose.cxx.o CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o CMakeFiles/plmdose.dir/particle_type.cxx.o CMakeFiles/plmdose.dir/rt_beam_model.cxx.o CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o CMakeFiles/plmdose.dir/rt_dij.cxx.o CMakeFiles/plmdose.dir/rt_lut.cxx.o CMakeFiles/plmdose.dir/rt_spot_map.cxx.o CMakeFiles/plmdose.dir/rt_mebs.cxx.o CMakeFiles/plmdose.dir/rt_parms.cxx.o CMakeFiles/plmdose.dir/plan_calc.cxx.o CMakeFiles/plmdose.dir/rt_sigma.cxx.o CMakeFiles/plmdose.dir/wed_parms.cxx.o -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../../../libplmutil.so.1.9 ../../../libspecfun.a ../../../libplmbase.so.1.9 /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lsz -ldl -lm -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm ../../../libnkidecompress.a ../../../libplmsys.so.1.9 -lpthread -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 ../../../libdevillard.a cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/cmake -E cmake_symlink_library ../../../libplmdose.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmdose.so make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 68%] Built target plmdose [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_gauss.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -MF CMakeFiles/plmregister.dir/rbf_gauss.cxx.o.d -o CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/rbf_gauss.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_wendland.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -MF CMakeFiles/plmregister.dir/rbf_wendland.cxx.o.d -o CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/rbf_wendland.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/registration.cxx.o -MF CMakeFiles/plmregister.dir/registration.cxx.o.d -o CMakeFiles/plmregister.dir/registration.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_data.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/registration_data.cxx.o -MF CMakeFiles/plmregister.dir/registration_data.cxx.o.d -o CMakeFiles/plmregister.dir/registration_data.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration_data.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_parms.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/registration_parms.cxx.o -MF CMakeFiles/plmregister.dir/registration_parms.cxx.o.d -o CMakeFiles/plmregister.dir/registration_parms.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration_parms.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_resample.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/registration_resample.cxx.o -MF CMakeFiles/plmregister.dir/registration_resample.cxx.o.d -o CMakeFiles/plmregister.dir/registration_resample.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration_resample.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_util.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/registration_util.cxx.o -MF CMakeFiles/plmregister.dir/registration_util.cxx.o.d -o CMakeFiles/plmregister.dir/registration_util.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration_util.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration.cxx: In function ‘void* registration_main_thread(void*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration.cxx:597:51: warning: ‘ThreadInfoStruct’ is deprecated: Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0 [-Wdeprecated-declarations] 597 | itk::PlatformMultiThreader::ThreadInfoStruct *info | ^~~~ In file included from /usr/include/ITK-5.2/itkPlatformMultiThreader.h:31, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration.cxx:9: /usr/include/ITK-5.2/itkMultiThreaderBase.h:250:93: note: declared here 250 | struct [[deprecated("Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0")]] ThreadInfoStruct | ^~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration.cxx:598:56: warning: ‘ThreadInfoStruct’ is deprecated: Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0 [-Wdeprecated-declarations] 598 | = (itk::PlatformMultiThreader::ThreadInfoStruct*) param; | ^ In file included from /usr/include/ITK-5.2/itkPlatformMultiThreader.h:31, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration.cxx:9: /usr/include/ITK-5.2/itkMultiThreaderBase.h:250:93: note: declared here 250 | struct [[deprecated("Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0")]] ThreadInfoStruct | ^~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration.cxx: In member function ‘void Registration::start_registration()’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration.cxx:623:53: warning: ‘itk::ThreadIdType itk::PlatformMultiThreader::SpawnThread(itk::ThreadFunctionType, void*)’ is deprecated [-Wdeprecated-declarations] 623 | d_ptr->thread_no = d_ptr->threader->SpawnThread ( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 624 | registration_main_thread, (void*) this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkIntTypes.h:21, from /usr/include/ITK-5.2/itkSize.h:21, from /usr/include/ITK-5.2/itkOffset.h:21, from /usr/include/ITK-5.2/itkIndex.h:21, from /usr/include/ITK-5.2/itkImageConstIteratorWithIndex.h:21, from /usr/include/ITK-5.2/itkImageRegionConstIteratorWithIndex.h:21, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/registration.cxx:7: /usr/include/ITK-5.2/itkPlatformMultiThreader.h:137:3: note: declared here 137 | itkLegacyMacro(ThreadIdType SpawnThread(ThreadFunctionType, void * data)); | ^~~~~~~~~~~~~~ [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/shared_parms.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/shared_parms.cxx.o -MF CMakeFiles/plmregister.dir/shared_parms.cxx.o.d -o CMakeFiles/plmregister.dir/shared_parms.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/shared_parms.cxx [ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o -MF CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o.d -o CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/similarity_metric_type.cxx [ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/stage_parms.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/stage_parms.cxx.o -MF CMakeFiles/plmregister.dir/stage_parms.cxx.o.d -o CMakeFiles/plmregister.dir/stage_parms.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/stage_parms.cxx [ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_grid_search.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/translation_grid_search.cxx.o -MF CMakeFiles/plmregister.dir/translation_grid_search.cxx.o.d -o CMakeFiles/plmregister.dir/translation_grid_search.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/translation_grid_search.cxx [ 72%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mi.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mi.cxx.o -MF CMakeFiles/plmregister.dir/translation_mi.cxx.o.d -o CMakeFiles/plmregister.dir/translation_mi.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/translation_mi.cxx [ 72%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mse.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmregister_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mse.cxx.o -MF CMakeFiles/plmregister.dir/translation_mse.cxx.o.d -o CMakeFiles/plmregister.dir/translation_mse.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/translation_mse.cxx [ 72%] Linking CXX shared library ../../../libplmregister.so cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmregister.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmregister.so.1.9 -o ../../../libplmregister.so.1.9 CMakeFiles/plmregister.dir/bspline.cxx.o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o CMakeFiles/plmregister.dir/bspline_gm.cxx.o CMakeFiles/plmregister.dir/bspline_mi.cxx.o CMakeFiles/plmregister.dir/bspline_mse.cxx.o CMakeFiles/plmregister.dir/bspline_optimize.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o CMakeFiles/plmregister.dir/bspline_parms.cxx.o CMakeFiles/plmregister.dir/bspline_score.cxx.o CMakeFiles/plmregister.dir/bspline_stage.cxx.o CMakeFiles/plmregister.dir/bspline_state.cxx.o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o CMakeFiles/plmregister.dir/demons.cxx.o CMakeFiles/plmregister.dir/demons_cpu.cxx.o CMakeFiles/plmregister.dir/demons_state.cxx.o CMakeFiles/plmregister.dir/gpuit_demons.cxx.o CMakeFiles/plmregister.dir/groupwise_parms.cxx.o CMakeFiles/plmregister.dir/histogram.cxx.o CMakeFiles/plmregister.dir/itk_align_center.cxx.o CMakeFiles/plmregister.dir/itk_demons.cxx.o CMakeFiles/plmregister.dir/itk_demons_util.cxx.o CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o CMakeFiles/plmregister.dir/itk_log_demons.cxx.o CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o CMakeFiles/plmregister.dir/itk_optimizer.cxx.o CMakeFiles/plmregister.dir/itk_registration.cxx.o CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o CMakeFiles/plmregister.dir/itk_tps.cxx.o CMakeFiles/plmregister.dir/joint_histogram.cxx.o CMakeFiles/plmregister.dir/landmark_warp.cxx.o CMakeFiles/plmregister.dir/metric_parms.cxx.o CMakeFiles/plmregister.dir/metric_state.cxx.o CMakeFiles/plmregister.dir/process_parms.cxx.o CMakeFiles/plmregister.dir/rbf_cluster.cxx.o CMakeFiles/plmregister.dir/rbf_gauss.cxx.o CMakeFiles/plmregister.dir/rbf_wendland.cxx.o CMakeFiles/plmregister.dir/registration.cxx.o CMakeFiles/plmregister.dir/registration_data.cxx.o CMakeFiles/plmregister.dir/registration_parms.cxx.o CMakeFiles/plmregister.dir/registration_resample.cxx.o CMakeFiles/plmregister.dir/registration_util.cxx.o CMakeFiles/plmregister.dir/shared_parms.cxx.o CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o CMakeFiles/plmregister.dir/stage_parms.cxx.o CMakeFiles/plmregister.dir/translation_grid_search.cxx.o CMakeFiles/plmregister.dir/translation_mi.cxx.o CMakeFiles/plmregister.dir/translation_mse.cxx.o -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../../../liblbfgs.a ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lsz -ldl -lm -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm ../../../libnkidecompress.a ../../../libplmsys.so.1.9 -lpthread -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 -lfftw3f -lfftw3 ../../../libdevillard.a cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/cmake -E cmake_symlink_library ../../../libplmregister.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmregister.so make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 72%] Built target plmregister make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment/CMakeFiles/plmsegment.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 72%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o [ 72%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_parms.cxx [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_thumbnailer.cxx [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_task.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel.cxx [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_trainer.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o -MF CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o.d -o CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/dlib_trainer.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_task.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_task.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_task.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_task.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs.cxx.o -MF CMakeFiles/plmsegment.dir/mabs.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs.cxx [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_feature.cxx [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_parms.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_parms.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_parms.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_parms.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_parms.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_seg_weights.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_stats.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_stats.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_stats.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_stats.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_stats.cxx In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.h:188, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:13: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.txx: In member function ‘void itk::RANSAC::SetNumberOfThreads(unsigned int)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.txx:26:53: warning: ‘static itk::ThreadIdType itk::PlatformMultiThreader::GetGlobalDefaultNumberOfThreads()’ is deprecated [-Wdeprecated-declarations] 26 | numberOfThreads>itk::PlatformMultiThreader::GetGlobalDefaultNumberOfThreads() ) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkLightObject.h:21, from /usr/include/ITK-5.2/itkObject.h:31, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/ParametersEstimator.h:5, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:12: /usr/include/ITK-5.2/itkPlatformMultiThreader.h:99:3: note: declared here 99 | itkLegacyMacro(static ThreadIdType GetGlobalDefaultNumberOfThreads()) | ^~~~~~~~~~~~~~ In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.h:188, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:13: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.txx:26:84: warning: ‘static itk::ThreadIdType itk::PlatformMultiThreader::GetGlobalDefaultNumberOfThreads()’ is deprecated [-Wdeprecated-declarations] 26 | numberOfThreads>itk::PlatformMultiThreader::GetGlobalDefaultNumberOfThreads() ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-5.2/itkLightObject.h:21, from /usr/include/ITK-5.2/itkObject.h:31, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/ParametersEstimator.h:5, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:12: /usr/include/ITK-5.2/itkPlatformMultiThreader.h:99:3: note: declared here 99 | itkLegacyMacro(static ThreadIdType GetGlobalDefaultNumberOfThreads()) | ^~~~~~~~~~~~~~ In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.h:188, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:13: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.txx: In static member function ‘static void* itk::RANSAC::RANSACThreadCallback(void*)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.txx:160:58: warning: ‘ThreadInfoStruct’ is deprecated: Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0 [-Wdeprecated-declarations] 160 | typedef itk::PlatformMultiThreader::ThreadInfoStruct ThreadInfoType; | ^~~~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkPlatformMultiThreader.h:31, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.h:13, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:13: /usr/include/ITK-5.2/itkMultiThreaderBase.h:250:93: note: declared here 250 | struct [[deprecated("Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0")]] ThreadInfoStruct | ^~~~~~~~~~~~~~~~ In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.h:188, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:13: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.txx: In instantiation of ‘double itk::RANSAC::Compute(std::vector&, double) [with T = itk::Point; S = double]’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:248:54: required from here /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.txx:114:33: warning: ‘virtual void itk::MultiThreaderBase::SetNumberOfThreads(itk::ThreadIdType)’ is deprecated [-Wdeprecated-declarations] 114 | threader->SetNumberOfThreads( this->numberOfThreads ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkLightObject.h:21, from /usr/include/ITK-5.2/itkObject.h:31, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/ParametersEstimator.h:5, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:12: /usr/include/ITK-5.2/itkMultiThreaderBase.h:224:3: note: declared here 224 | itkLegacyMacro(virtual void SetNumberOfThreads(ThreadIdType numberOfThreads)) | ^~~~~~~~~~~~~~ In file included from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.h:188, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:13: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/RANSAC.txx:114:33: warning: ‘virtual void itk::MultiThreaderBase::SetNumberOfThreads(itk::ThreadIdType)’ is deprecated [-Wdeprecated-declarations] 114 | threader->SetNumberOfThreads( this->numberOfThreads ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/ITK-5.2/itkLightObject.h:21, from /usr/include/ITK-5.2/itkObject.h:31, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/ParametersEstimator.h:5, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.h:8, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:12: /usr/include/ITK-5.2/itkMultiThreaderBase.h:224:3: note: declared here 224 | itkLegacyMacro(virtual void SetNumberOfThreads(ThreadIdType numberOfThreads)) | ^~~~~~~~~~~~~~ [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_staple.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_staple.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_staple.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_staple.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_staple.cxx [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_vote.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -fopenmp -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_vote.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_vote.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_vote.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/mabs_vote.cxx [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/ml_convert.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/ml_convert.cxx.o -MF CMakeFiles/plmsegment.dir/ml_convert.cxx.o.d -o CMakeFiles/plmsegment.dir/ml_convert.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/ml_convert.cxx [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/segment_body.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -Dplmsegment_EXPORTS -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/segment_body.cxx.o -MF CMakeFiles/plmsegment.dir/segment_body.cxx.o.d -o CMakeFiles/plmsegment.dir/segment_body.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment/segment_body.cxx [ 77%] Linking CXX shared library ../../../libplmsegment.so cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmsegment.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fopenmp -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmsegment.so.1.9 -o ../../../libplmsegment.so.1.9 CMakeFiles/plmsegment.dir/autolabel.cxx.o CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o CMakeFiles/plmsegment.dir/autolabel_task.cxx.o CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o CMakeFiles/plmsegment.dir/mabs.cxx.o CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o CMakeFiles/plmsegment.dir/mabs_parms.cxx.o CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o CMakeFiles/plmsegment.dir/mabs_stats.cxx.o CMakeFiles/plmsegment.dir/mabs_staple.cxx.o CMakeFiles/plmsegment.dir/mabs_vote.cxx.o CMakeFiles/plmsegment.dir/ml_convert.cxx.o CMakeFiles/plmsegment.dir/segment_body.cxx.o -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../../../libplmregister.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 -lfftw3f -lfftw3 ../../../libdevillard.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lm ../../../libnkidecompress.a -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 ../../../liblbfgs.a cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/cmake -E cmake_symlink_library ../../../libplmsegment.so.1.9 ../../../libplmsegment.so.1.9 ../../../libplmsegment.so make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 77%] Built target plmsegment make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/depend make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/depend make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/depend make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/depend make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_info.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/depend make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/depend make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake --color= make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/check_grad.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/demons.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/wed.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/build [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -MF CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o.d -o CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/shuffle_mha_main.cxx [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -MF CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o.d -o CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/merge_vector_fields.cxx make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/build make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/dicom_info.dir/dicom_info.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/dicom_info.dir/dicom_info.cxx.o -MF CMakeFiles/dicom_info.dir/dicom_info.cxx.o.d -o CMakeFiles/dicom_info.dir/dicom_info.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/dicom_info.cxx [ 77%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_add.cxx.o make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_add.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_add.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_add.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_add.cxx [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/compute_distance.cxx.o [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o [ 79%] Building CXX object src/plastimatch/standalone/CMakeFiles/wed.dir/wed_main.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/compute_distance.dir/compute_distance.cxx.o -MF CMakeFiles/compute_distance.dir/compute_distance.cxx.o.d -o CMakeFiles/compute_distance.dir/compute_distance.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/compute_distance.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/wed.dir/wed_main.cxx.o -MF CMakeFiles/wed.dir/wed_main.cxx.o.d -o CMakeFiles/wed.dir/wed_main.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/wed_main.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o -MF CMakeFiles/check_grad.dir/check_grad.cxx.o.d -o CMakeFiles/check_grad.dir/check_grad.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/check_grad.cxx cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -MF CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o.d -o CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/landmark_diff_main.cxx [ 79%] Building CXX object src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -MF CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o.d -o CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/xvi_archive.cxx [ 79%] Building CXX object src/plastimatch/standalone/CMakeFiles/demons.dir/demons_main.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/demons.dir/demons_main.cxx.o -MF CMakeFiles/demons.dir/demons_main.cxx.o.d -o CMakeFiles/demons.dir/demons_main.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/demons_main.cxx [ 80%] Linking CXX executable ../../../landmark_diff cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/landmark_diff.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -o ../../../landmark_diff -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 80%] Built target landmark_diff make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dlib_train.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 80%] Building CXX object src/plastimatch/standalone/CMakeFiles/dlib_train.dir/dlib_train.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/dlib_train.dir/dlib_train.cxx.o -MF CMakeFiles/dlib_train.dir/dlib_train.cxx.o.d -o CMakeFiles/dlib_train.dir/dlib_train.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/dlib_train.cxx [ 80%] Building CXX object src/plastimatch/standalone/CMakeFiles/demons.dir/demons_opts.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/demons.dir/demons_opts.cxx.o -MF CMakeFiles/demons.dir/demons_opts.cxx.o.d -o CMakeFiles/demons.dir/demons_opts.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/demons_opts.cxx [ 81%] Linking CXX executable ../../../demons cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/demons.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/demons.dir/demons_main.cxx.o CMakeFiles/demons.dir/demons_opts.cxx.o -o ../../../demons -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 81%] Built target demons make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -MF CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o.d -o CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/hnd_to_pfm.cxx [ 81%] Linking CXX executable ../../../hnd_to_pfm cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/hnd_to_pfm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -o ../../../hnd_to_pfm -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 81%] Linking CXX executable ../../../wed cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/wed.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/wed.dir/wed_main.cxx.o -o ../../../wed -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 81%] Linking CXX executable ../../../shuffle_mha cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/shuffle_mha.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -o ../../../shuffle_mha -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 81%] Built target hnd_to_pfm make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -MF CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o.d -o CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/bragg_curve_main.cxx [ 81%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o -MF CMakeFiles/compute_distance.dir/closest_point.cxx.o.d -o CMakeFiles/compute_distance.dir/closest_point.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/closest_point.cxx make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 81%] Built target wed make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/sobp.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/build make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o -MF CMakeFiles/sobp.dir/sobp_main.cxx.o.d -o CMakeFiles/sobp.dir/sobp_main.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/sobp_main.cxx [ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -MF CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o.d -o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/bragg_curve_opts.cxx [ 82%] Linking CXX executable ../../../bragg_curve cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/bragg_curve.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -o ../../../bragg_curve -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 82%] Built target bragg_curve make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/depend make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 82%] Built target shuffle_mha [ 82%] Building CXX object src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -MF CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o.d -o CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/dicom_uid_main.cxx [ 83%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/inih-r29 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o -MF CMakeFiles/compute_distance.dir/read_obj.cxx.o.d -o CMakeFiles/compute_distance.dir/read_obj.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/standalone/read_obj.cxx [ 84%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_adjust.cxx [ 84%] Linking CXX executable ../../../sobp cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/sobp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/sobp.dir/sobp_main.cxx.o -o ../../../sobp -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 84%] Linking CXX executable ../../../compute_distance cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/compute_distance.dir/compute_distance.cxx.o CMakeFiles/compute_distance.dir/closest_point.cxx.o CMakeFiles/compute_distance.dir/read_obj.cxx.o -o ../../../compute_distance -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 84%] Built target sobp [ 84%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_autolabel_train.cxx make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 84%] Built target compute_distance [ 84%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_autolabel.cxx [ 84%] Linking CXX executable ../../../dicom_uid cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_uid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -o ../../../dicom_uid -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 84%] Linking CXX executable ../../../check_grad cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/check_grad.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/check_grad.dir/check_grad.cxx.o -o ../../../check_grad -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 85%] Linking CXX executable ../../../dicom_info cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_info.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/dicom_info.dir/dicom_info.cxx.o -o ../../../dicom_info -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 85%] Built target dicom_uid [ 85%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_bbox.cxx [ 86%] Linking CXX executable ../../../merge_vfs cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/merge_vfs.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -o ../../../merge_vfs -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 86%] Built target check_grad [ 86%] Built target dicom_info [ 87%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_benchmark.cxx [ 87%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_boundary.cxx make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 87%] Built target merge_vfs [ 87%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_compare.cxx [ 87%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_compose.cxx [ 88%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_crop.cxx [ 89%] Linking CXX executable ../../../xvi_archive cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/xvi_archive.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -o ../../../xvi_archive -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../libinih.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 [ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_dice.cxx [ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_diff.cxx make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 89%] Built target xvi_archive [ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_dmap.cxx [ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_dose.cxx [ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_drr.cxx [ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_dvh.cxx [ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_fdk.cxx [ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_filter.cxx [ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_gamma.cxx [ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_header.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_header.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_header.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_header.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_header.cxx [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_intersect.cxx [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_jacobian.cxx [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_lm_warp.cxx [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_mabs.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_mask.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_maximum.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_ml_convert.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_multiply.cxx [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_probe.cxx [ 95%] Linking CXX executable ../../../dlib_train cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlib_train.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/dlib_train.dir/dlib_train.cxx.o -o ../../../dlib_train -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [ 95%] Built target dlib_train [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_register.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_register.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_register.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_register.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_register.cxx [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_resample.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_scale.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_segment.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_sift.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_stats.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_synth.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_synth_vf.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_threshold.cxx [ 97%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_thumbnail.cxx [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_union.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_union.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_union.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_union.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_union.cxx [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_warp.cxx [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_warp_dij.cxx [ 98%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_warp_pointset.cxx [ 99%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_wed.cxx [ 99%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx [ 99%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xf_convert.cxx [ 99%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xf_invert.cxx /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx: In function ‘void do_command_xio_dvh(int, char**)’: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:46:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 46 | fgets(buf, 200, fp); //XiO Dose Volume Histogram | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:49:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 49 | fgets(patientid, 200, fp); // patient ID, abcde1234 | ~~~~~^~~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:50:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 50 | fgets(buf, 200, fp); // plan | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:51:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 51 | fgets(structurename, 200, fp); // structure name | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:52:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 52 | fgets(buf, 200, fp); // N.NN mm resolution | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:54:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 54 | fgets(buf, 200, fp); // number of bins | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:59:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 59 | fgets(buf, 200, fp); // date | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:60:14: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 60 | fgets(buf, 200, fp); // table header: min bin dose (cGy), bin volume (cc) | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:78:18: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 78 | fgets(buf, 200, fp); | ~~~~~^~~~~~~~~~~~~~ /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:72:37: warning: ‘%s’ directive writing up to 254 bytes into a region of size 253 [-Wformat-overflow=] 72 | sprintf(outfilename, "%s/%s-%s.txt",output_dir, patientid, structurename); | ^~ ~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:5: /usr/include/x86_64-linux-gnu/bits/stdio2.h:38:34: note: ‘__builtin___sprintf_chk’ output 7 or more bytes (assuming 261) into a destination of size 255 38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [100%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o -MF CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o.d -o CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/plastimatch_main.cxx [100%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/util -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/sys -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/segment -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/register -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/reconstruct -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/qt -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/opencl -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cuda -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/dose -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/clp -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/base -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/itk-5.1.0 -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/nSIFT -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/liblbfgs-1.9/include -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/ransac/Common -I/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIE -Wno-cpp -Wreturn-type -std=gnu++17 -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o -MF CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o.d -o CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o -c /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/src/plastimatch/cli/plastimatch_startup.cxx [100%] Linking CXX executable ../../../plastimatch cd /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/plastimatch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp CMakeFiles/plastimatch.dir/pcmd_add.cxx.o CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o CMakeFiles/plastimatch.dir/pcmd_header.cxx.o CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o CMakeFiles/plastimatch.dir/pcmd_register.cxx.o CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o CMakeFiles/plastimatch.dir/pcmd_union.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o -o ../../../plastimatch -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lcrypto -lcurl -lpthread -lsz -ldl -lm -lm -ldl -lrt -lnetcdf /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libi2d.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpeg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg8.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg12.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libijg16.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmjpls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtkcharls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libcmr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmwlm.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpstat.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmrt.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmseg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmtract.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmpmap.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmect.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdlib.so.19.10.0 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../clp/libplmclp.a ../../../liblbfgs.a /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 -lexpat /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/x86_64-linux-gnu/libdcmtls.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmsr.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmimage.so.16.3.6.6 -ltiff -lxml2 /usr/lib/x86_64-linux-gnu/libdcmdsig.so.16.3.6.6 -lssl /usr/lib/x86_64-linux-gnu/libdcmqrdb.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmnet.so.16.3.6.6 -lwrap /usr/lib/x86_64-linux-gnu/libdcmimgle.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmfg.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmiod.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libdcmdata.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/liboflog.so.16.3.6.6 /usr/lib/x86_64-linux-gnu/libofstd.so.16.3.6.6 -lnsl -lpthread -lcrypto /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 -lm /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -ldl -lpthread -lnsl -lz -ljpeg -lpng -lblas -llapack -lsqlite3 make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' [100%] Built target plastimatch make[2]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1' dh_auto_install cd obj-x86_64-linux-gnu && make -j10 install DESTDIR=/build/plastimatch-RWww3A/plastimatch-1.9.3\+dfsg.1/debian/plastimatch AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1 -B/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RELEASE" -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/share/doc/plastimatch/README.TXT -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/share/doc/plastimatch/COPYRIGHT.TXT -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/liblbfgs.a -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libdevillard.a -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libinih.a -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libspecfun.a -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libnkidecompress.a -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends.cmake -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends-release.cmake -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfig.cmake -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfigVersion.cmake -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmbase.so.1.9 -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmbase.so -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmbase_config.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/aperture.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/astroid_dose.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/beam_geometry.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_header.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_interpolate.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_warp.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform_legacy.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/clamp.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_extract.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_io.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_probe.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_util.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_cosines.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_matrices.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/float_pair_list.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gaussian.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io_p.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_stats.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate_macros.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkAndConstantToImageFilter.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkClampCastImageFilter.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_bbox.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_directions.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_accumulate.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_cast.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_clone.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_create.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_header_compare.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_load.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_origin.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_region.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_save.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_shift_scale.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_stats.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_type.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_metadata.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_point.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_pointset.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_resample.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_volume_header.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_warp.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/make_string.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/mc_dose.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/metadata.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/mha_io.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/nki_io.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/parameter_parser.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_file_format.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_p.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_header.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_set.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_type.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_itk.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_uid_prefix.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_warp.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset_warp.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image_dir.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_matrix.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_volume.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pwlut.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterize_slice.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterizer.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/raw_pointset.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_data.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_callback.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_probe.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume_lut.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_p.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_metadata.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_contour.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_roi.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_beam.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_control_pt.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/segmentation.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_extract.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_list.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_img_extract.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_list_io.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/threading.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/thumbnail.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_convolve.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_jacobian.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_stats.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_behavior.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_conv.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_fill.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_gaussian.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_grad.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_header.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_limit.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_macros.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_resample.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_stats.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_convert.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_legacy.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_point.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct_transform.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_demographic.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dir.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dose.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_patient.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_plan.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_structures.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_studyset.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm_p.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_config.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_file.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_metadata.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_module.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rdd.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtdose.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtss.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtplan.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study_p.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series_map.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_sro.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_uid.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_util.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmsys.so.1.9 -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmsys.so -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_config.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmsys_config.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/compiler_warnings.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dir_list.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/double_align8.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dlib_threads.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/file_util.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/logfile.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/option_range.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/path_util.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_endian.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_exception.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_fwrite.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_int.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_macros.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_math.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_return_code.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_sleep.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer_p.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_va_copy.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/print_and_exit.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/smart_pointer.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/string_util.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload_legacy.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmutil.so.1.9 -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmutil.so -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmutil_config.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dice_statistics.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dvh.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gamma_dose_comparison.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/geometry_chooser.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hausdorff_distance.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_boundary.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_center.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_adjust.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_histogram_matching.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_intersect.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_local_intensity_correction.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_union.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_warp.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_adjust.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_type.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xf_invert.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/zcrop.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gabor.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ramp_filter.h -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/bin/plastimatch -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmdose.so.1.9 -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmdose.so -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmreconstruct.so.1.9 -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmreconstruct.so -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmregister.so.1.9 -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmregister.so -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmsegment.so.1.9 -- Installing: /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libplmsegment.so make[2]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/obj-x86_64-linux-gnu' rm -rfv /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/*.a removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libdevillard.a' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libinih.a' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/liblbfgs.a' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libnkidecompress.a' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/libspecfun.a' rm -rfv /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends.cmake' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends-release.cmake' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfig.cmake' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfigVersion.cmake' removed directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch' removed directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/lib/cmake' rm -rfv /build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmbase_config.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/aperture.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/astroid_dose.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/beam_geometry.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_header.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_interpolate.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_warp.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform_legacy.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/clamp.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_extract.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_io.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_probe.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_util.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_cosines.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_matrices.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/float_pair_list.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gaussian.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io_p.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_stats.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate_macros.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkAndConstantToImageFilter.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkClampCastImageFilter.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_bbox.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_directions.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_accumulate.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_cast.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_clone.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_create.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_header_compare.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_load.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_origin.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_region.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_save.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_shift_scale.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_stats.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_type.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_metadata.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_point.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_pointset.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_resample.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_volume_header.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_warp.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/make_string.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/mc_dose.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/metadata.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/mha_io.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/nki_io.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/parameter_parser.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_file_format.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_p.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_header.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_set.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_type.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_itk.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_uid_prefix.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_warp.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset_warp.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image_dir.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_matrix.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_volume.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/pwlut.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterize_slice.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterizer.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/raw_pointset.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_data.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_callback.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_probe.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume_lut.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_p.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_metadata.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_contour.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_roi.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_beam.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_control_pt.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/segmentation.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_extract.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_list.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_img_extract.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_list_io.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/threading.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/thumbnail.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_convolve.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_jacobian.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_stats.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_behavior.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_conv.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_fill.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_gaussian.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_grad.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_header.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_limit.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_macros.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_resample.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_stats.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_convert.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_legacy.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_point.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct_transform.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_demographic.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dir.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dose.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_patient.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_plan.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_structures.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_studyset.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm_p.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_config.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_file.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_metadata.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_module.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rdd.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtdose.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtss.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtplan.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study_p.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_sro.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series_map.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_uid.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_util.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_config.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmsys_config.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/compiler_warnings.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dir_list.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/double_align8.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dlib_threads.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/file_util.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/logfile.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/option_range.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/path_util.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_endian.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_exception.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_fwrite.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_int.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_macros.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_math.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_return_code.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_sleep.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer_p.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_va_copy.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/print_and_exit.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/smart_pointer.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/string_util.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload_legacy.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmutil_config.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dice_statistics.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/dvh.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gamma_dose_comparison.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/geometry_chooser.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/hausdorff_distance.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_boundary.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_center.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_adjust.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_histogram_matching.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_intersect.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_local_intensity_correction.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_union.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_warp.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_adjust.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_type.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/xf_invert.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/zcrop.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/gabor.h' removed '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch/ramp_filter.h' removed directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include/plastimatch' removed directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1/debian/plastimatch/usr/include' make[1]: Leaving directory '/build/plastimatch-RWww3A/plastimatch-1.9.3+dfsg.1' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: deprecated use of LD_LIBRARY_PATH with private library directory which interferes with cross-building, please use -l option instead dpkg-shlibdeps: warning: deprecated use of LD_LIBRARY_PATH with private library directory which interferes with cross-building, please use -l option instead dpkg-shlibdeps: warning: deprecated use of LD_LIBRARY_PATH with private library directory which interferes with cross-building, please use -l option instead dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'plastimatch-dbgsym' in '../plastimatch-dbgsym_1.9.3+dfsg.1-3_amd64.deb'. dpkg-deb: building package 'plastimatch' in '../plastimatch_1.9.3+dfsg.1-3_amd64.deb'. dpkg-genbuildinfo --build=any -O../plastimatch_1.9.3+dfsg.1-3_amd64.buildinfo dpkg-genchanges --build=any -O../plastimatch_1.9.3+dfsg.1-3_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/plastimatch-RWww3A /tmp/plastimatch-1.9.3+dfsg.1-3fof5l6jb I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.6DS3RLrpTt... I: success in 1011.7929 seconds md5: plastimatch-dbgsym_1.9.3+dfsg.1-3_amd64.deb: OK md5: plastimatch_1.9.3+dfsg.1-3_amd64.deb: OK sha1: plastimatch-dbgsym_1.9.3+dfsg.1-3_amd64.deb: OK sha1: plastimatch_1.9.3+dfsg.1-3_amd64.deb: OK sha256: plastimatch-dbgsym_1.9.3+dfsg.1-3_amd64.deb: OK sha256: plastimatch_1.9.3+dfsg.1-3_amd64.deb: OK Checksums: OK