Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/p/phylip/phylip_3.697+dfsg-2_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/phylip-3.697+dfsg-2ex_i_1wk/phylip_3.697+dfsg-2_amd64.buildinfo Get source package info: phylip=1:3.697+dfsg-2 Source URL: http://snapshot.notset.fr/mr/package/phylip/1:3.697+dfsg-2/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=adduser=3.118 ant=1.10.8-1 autoconf=2.69-11.1 automake=1:1.16.2-3 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.47 bash=5.0-6 binutils=2.34.90.20200706-1 binutils-common=2.34.90.20200706-1 binutils-x86-64-linux-gnu=2.34.90.20200706-1 bsdextrautils=2.35.2-9 bsdutils=1:2.35.2-9 build-essential=12.8 bzip2=1.0.8-4 ca-certificates=20200601 ca-certificates-java=20190909 coreutils=8.32-3 cpp=4:10.1.0-1 cpp-10=10.1.0-6 dash=0.5.10.2-7 dctrl-tools=2.24-3+b1 debconf=1.5.74 debhelper=13.2 debianutils=4.11 default-jdk=2:1.11-72 default-jdk-headless=2:1.11-72 default-jre=2:1.11-72 default-jre-headless=2:1.11-72 devscripts=2.20.4 dh-autoreconf=19 dh-exec=0.23.2 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 dirmngr=2.2.20-1 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13-5 fakeroot=1.24-1 file=1:5.38-5 findutils=4.7.0-1 fontconfig-config=2.13.1-4.2 fonts-dejavu-core=2.37-2 g++=4:10.1.0-1 g++-10=10.1.0-6 gcc=4:10.1.0-1 gcc-10=10.1.0-6 gcc-10-base=10.1.0-6 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 gnupg=2.2.20-1 gnupg-l10n=2.2.20-1 gnupg-utils=2.2.20-1 gpg=2.2.20-1 gpg-agent=2.2.20-1 gpg-wks-client=2.2.20-1 gpg-wks-server=2.2.20-1 gpgconf=2.2.20-1 gpgsm=2.2.20-1 gpgv=2.2.20-1 grep=3.4-1 groff-base=1.22.4-5 gzip=1.10-2 hostname=3.23 init-system-helpers=1.58 intltool-debian=0.35.0+20060710.5 java-common=0.72 javahelper=0.75 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libasan6=10.1.0-6 libasound2=1.2.2-2.3 libasound2-data=1.2.2-2.3 libassuan0=2.5.3-7.1 libatomic1=10.1.0-6 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3 libaudit1=1:2.8.5-3+b1 libavahi-client3=0.8-3 libavahi-common-data=0.8-3 libavahi-common3=0.8-3 libb-hooks-op-check-perl=0.22-1+b2 libbinutils=2.34.90.20200706-1 libblkid1=2.35.2-9 libbrotli1=1.0.7-7 libbsd0=0.10.0-1 libbz2-1.0=1.0.8-4 libc-bin=2.31-1 libc-dev-bin=2.31-1 libc6=2.31-1 libc6-dev=2.31-1 libcap-ng0=0.7.9-2.2 libcc1-0=10.1.0-6 libclass-method-modifiers-perl=2.13-1 libcom-err2=1.45.6-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.16-1 libcrypt1=1:4.4.16-1 libctf-nobfd0=2.34.90.20200706-1 libctf0=2.34.90.20200706-1 libcups2=2.3.3-1 libdb5.3=5.3.28+dfsg1-0.6 libdbus-1-3=1.12.20-1 libdebconfclient0=0.253 libdebhelper-perl=13.2 libdevel-callchecker-perl=0.008-1+b1 libdpkg-perl=1.20.5 libdrm-amdgpu1=2.4.102-1 libdrm-common=2.4.102-1 libdrm-intel1=2.4.102-1 libdrm-nouveau2=2.4.102-1 libdrm-radeon1=2.4.102-1 libdrm2=2.4.102-1 libdynaloader-functions-perl=0.003-1 libedit2=3.1-20191231-1 libelf1=0.176-1.1 libencode-locale-perl=1.05-1 libexpat1=2.2.9-1 libfakeroot=1.24-1 libffi7=3.3-4 libfile-homedir-perl=1.004-1 libfile-listing-perl=6.04-1 libfile-stripnondeterminism-perl=1.9.0-1 libfile-which-perl=1.23-1 libfontconfig1=2.13.1-4.2 libfreetype6=2.10.2+dfsg-3 libgcc-10-dev=10.1.0-6 libgcc-s1=10.1.0-6 libgcrypt20=1.8.6-2 libgdbm-compat4=1.18.1-5 libgdbm6=1.18.1-5 libgif7=5.1.9-1 libgl1=1.3.1-1 libgl1-mesa-dri=20.1.2-1 libglapi-mesa=20.1.2-1 libglib2.0-0=2.64.4-1 libglvnd0=1.3.1-1 libglx-mesa0=20.1.2-1 libglx0=1.3.1-1 libgmp10=2:6.2.0+dfsg-6 libgnutls30=3.6.14-2+b1 libgomp1=10.1.0-6 libgpg-error0=1.38-2 libgssapi-krb5-2=1.17-10 libhogweed6=3.6-2 libhtml-parser-perl=3.72-5 libhtml-tagset-perl=3.20-4 libhtml-tree-perl=5.07-2 libhttp-cookies-perl=6.08-1 libhttp-date-perl=6.05-1 libhttp-message-perl=6.25-1 libhttp-negotiate-perl=6.01-1 libice-dev=2:1.0.9-2 libice6=2:1.0.9-2 libicu67=67.1-3 libidn2-0=2.3.0-1 libimport-into-perl=1.002005-1 libio-html-perl=1.001-1 libio-pty-perl=1:1.12-1 libio-socket-ssl-perl=2.067-1 libipc-run-perl=20200505.0-1 libisl22=0.22.1-1 libitm1=10.1.0-6 libjna-java=5.5.0-1 libjna-jni=5.5.0-1 libjpeg62-turbo=1:2.0.5-1 libk5crypto3=1.17-10 libkeyutils1=1.6.1-2 libkrb5-3=1.17-10 libkrb5support0=1.17-10 libksba8=1.4.0-2 liblcms2-2=2.9-4+b1 libldap-2.4-2=2.4.50+dfsg-1+b1 libldap-common=2.4.50+dfsg-1 libllvm10=1:10.0.1-1 liblsan0=10.1.0-6 liblwp-mediatypes-perl=6.04-1 liblwp-protocol-https-perl=6.09-1 liblz4-1=1.9.2-2 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.38-5 libmagic1=1:5.38-5 libmodule-runtime-perl=0.016-1 libmoo-perl=2.004000-1 libmount1=2.35.2-9 libmpc3=1.1.0-1 libmpdec2=2.4.2-3 libmpfr6=4.1.0-3 libncursesw6=6.2-1 libnet-http-perl=6.19-1 libnet-ssleay-perl=1.88-3 libnettle8=3.6-2 libnpth0=1.6-2 libnspr4=2:4.25-1 libnss3=2:3.53.1-1 libp11-kit0=0.23.20-1 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libparams-classify-perl=0.015-1+b2 libpciaccess0=0.14-1 libpcre2-8-0=10.34-7 libpcre3=2:8.39-13 libpcsclite1=1.9.0-1 libperl5.30=5.30.3-4 libpipeline1=1.5.2-2 libpng16-16=1.6.37-2 libpthread-stubs0-dev=0.4-1 libpython3-stdlib=3.8.2-3 libpython3.8-minimal=3.8.5-1 libpython3.8-stdlib=3.8.5-1 libquadmath0=10.1.0-6 libreadline8=8.0-4 librole-tiny-perl=2.001004-1 libsasl2-2=2.1.27+dfsg-2 libsasl2-modules-db=2.1.27+dfsg-2 libseccomp2=2.4.3-1+b1 libselinux1=3.1-2 libsemanage-common=3.1-1 libsemanage1=3.1-1 libsensors-config=1:3.6.0-2 libsensors5=1:3.6.0-2 libsepol1=3.1-1 libsigsegv2=2.12-2 libsm-dev=2:1.2.3-1 libsm6=2:1.2.3-1 libsmartcols1=2.35.2-9 libsqlite3-0=3.32.3-1 libssl1.1=1.1.1g-1 libstdc++-10-dev=10.1.0-6 libstdc++6=10.1.0-6 libstrictures-perl=2.000006-1 libsub-override-perl=0.09-2 libsub-quote-perl=2.006006-1 libsystemd0=245.6-3 libtasn1-6=4.16.0-2 libtimedate-perl=2.3300-1 libtinfo6=6.2-1 libtool=2.4.6-14 libtry-tiny-perl=0.30-1 libtsan0=10.1.0-6 libubsan1=10.1.0-6 libuchardet0=0.0.7-1 libudev1=245.6-3 libunistring2=0.9.10-4 liburi-perl=1.76-2 libuuid1=2.35.2-9 libvulkan1=1.2.141.0-1 libwww-perl=6.46-1 libwww-robotrules-perl=6.02-1 libx11-6=2:1.6.9-2+b1 libx11-data=2:1.6.9-2 libx11-dev=2:1.6.9-2+b1 libx11-xcb1=2:1.6.9-2+b1 libxau-dev=1:1.0.8-1+b2 libxau6=1:1.0.8-1+b2 libxaw7=2:1.0.13-1+b2 libxaw7-dev=2:1.0.13-1+b2 libxcb-dri2-0=1.14-2 libxcb-dri3-0=1.14-2 libxcb-glx0=1.14-2 libxcb-present0=1.14-2 libxcb-sync1=1.14-2 libxcb1=1.14-2 libxcb1-dev=1.14-2 libxdamage1=1:1.1.5-2 libxdmcp-dev=1:1.1.2-3 libxdmcp6=1:1.1.2-3 libxext-dev=2:1.3.3-1+b2 libxext6=2:1.3.3-1+b2 libxfixes3=1:5.0.3-2 libxi6=2:1.7.10-1 libxml2=2.9.10+dfsg-5+b1 libxmu-dev=2:1.1.2-2+b3 libxmu-headers=2:1.1.2-2 libxmu6=2:1.1.2-2+b3 libxpm-dev=1:3.5.12-1 libxpm4=1:3.5.12-1 libxrender1=1:0.9.10-1 libxshmfence1=1.3-1 libxt-dev=1:1.1.5-1+b3 libxt6=1:1.1.5-1+b3 libxtst6=2:1.2.3-1 libxxf86vm1=1:1.1.4-1+b2 libz3-4=4.8.8-1 libzstd1=1.4.5+dfsg-3 linux-libc-dev=5.7.6-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 mime-support=3.64 ncurses-base=6.2-1 ncurses-bin=6.2-1 netbase=6.1 openjdk-11-jdk=11.0.8+10-1 openjdk-11-jdk-headless=11.0.8+10-1 openjdk-11-jre=11.0.8+10-1 openjdk-11-jre-headless=11.0.8+10-1 openssl=1.1.1g-1 passwd=1:4.8.1-1 patch=2.7.6-6 patchutils=0.4.2-1 perl=5.30.3-4 perl-base=5.30.3-4 perl-modules-5.30=5.30.3-4 perl-openssl-defaults=5 pinentry-curses=1.1.0-4 po-debconf=1.0.21 python3=3.8.2-3 python3-minimal=3.8.2-3 python3.8=3.8.5-1 python3.8-minimal=3.8.5-1 readline-common=8.0-4 sed=4.7-1 sensible-utils=0.0.12+nmu1 sysvinit-utils=2.96-3 tar=1.30+dfsg-7 ucf=3.0043 util-linux=2.35.2-9 wdiff=1.2.2-2+b1 x11-common=1:7.7+20 x11proto-core-dev=2020.1-1 x11proto-dev=2020.1-1 x11proto-xext-dev=2020.1-1 xorg-sgml-doctools=1:1.11-1 xtrans-dev=1.4.0-1 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20200723T030638Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d phylip=1:3.697+dfsg-2 && mkdir -p /build/phylip-wkJX8o && dpkg-source --no-check -x /*.dsc /build/phylip-wkJX8o/phylip-3.697+dfsg && chown -R builduser:builduser /build/phylip-wkJX8o" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/phylip-wkJX8o/phylip-3.697+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1595522256" dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/phylip-wkJX8o /tmp/phylip-3.697+dfsg-2ex_i_1wk bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20200723T030638Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.ord6C6y_Lq as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.ord6C6y_Lq Reading package lists... Building dependency tree... util-linux is already the newest version (2.35.2-9). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 132 kB of archives. After this operation, 393 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20200723T030638Z unstable/main amd64 libfakeroot amd64 1.24-1 [45.7 kB] Get:2 http://snapshot.notset.fr/archive/debian/20200723T030638Z unstable/main amd64 fakeroot amd64 1.24-1 [85.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 132 kB in 0s (1090 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4579 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.24-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.24-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.24-1_amd64.deb ... Unpacking fakeroot (1.24-1) ... Setting up libfakeroot:amd64 (1.24-1) ... Setting up fakeroot (1.24-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-1) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20200723T030638Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.ord6C6y_Lq Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20200723T030638Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 20s (1123 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.ord6C6y_Lq I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d phylip=1:3.697+dfsg-2 && mkdir -p /build/phylip-wkJX8o && dpkg-source --no-check -x /*.dsc /build/phylip-wkJX8o/phylip-3.697+dfsg && chown -R builduser:builduser /build/phylip-wkJX8o"' exec /tmp/mmdebstrap.ord6C6y_Lq Reading package lists... NOTICE: 'phylip' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/phylip.git Please use: git clone https://salsa.debian.org/med-team/phylip.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1178 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main phylip 1:3.697+dfsg-2 (dsc) [2175 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main phylip 1:3.697+dfsg-2 (tar) [1163 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main phylip 1:3.697+dfsg-2 (diff) [13.4 kB] Fetched 1178 kB in 1s (1102 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'phylip_3.697+dfsg-2.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting phylip in /build/phylip-wkJX8o/phylip-3.697+dfsg dpkg-source: info: unpacking phylip_3.697+dfsg.orig.tar.gz dpkg-source: info: unpacking phylip_3.697+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying install_fonts_data.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying 01_src_phylip_h dpkg-source: info: applying do_not_install_jar_files.patch dpkg-source: info: applying soname.patch dpkg-source: info: applying optimisation_flags.patch dpkg-source: info: applying fcommon-flag.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/phylip-wkJX8o/phylip-3.697+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1595522256" dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.ord6C6y_Lq dpkg-buildpackage: info: source package phylip dpkg-buildpackage: info: source version 1:3.697+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Shayan Doust dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with javahelper --no-parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/build/phylip-wkJX8o/phylip-3.697+dfsg' dh_auto_clean --sourcedirectory=src --buildsystem=makefile -- -f Makefile.unx clean cd src && make -j1 distclean -f Makefile.unx clean make[2]: Entering directory '/build/phylip-wkJX8o/phylip-3.697+dfsg/src' Removing object files to save space Finished removing object files. Now will remove executable files from the current directory, but not from the executables directory. (If some are not here, the makefile will terminate with an error message but this is not a problem) Removing executables from this directory Finished cleanup. Removing executables Finaly removed all executable files. make[2]: 'clean' is up to date. make[2]: Leaving directory '/build/phylip-wkJX8o/phylip-3.697+dfsg/src' rm -fr exe/* fonts/ src/*.so* if [ -e build.xml ] ; then \ ant clean ; \ rm -rf dist build.xml ; \ fi make[1]: Leaving directory '/build/phylip-wkJX8o/phylip-3.697+dfsg' dh_autoreconf_clean -O--no-parallel jh_clean -O--no-parallel dh_clean -O--no-parallel debian/rules binary-arch dh binary-arch --with javahelper --no-parallel dh_update_autotools_config -a -O--no-parallel dh_autoreconf -a -O--no-parallel jh_linkjars -a -O--no-parallel debian/rules override_dh_auto_build make[1]: Entering directory '/build/phylip-wkJX8o/phylip-3.697+dfsg' dh_auto_build --sourcedirectory=src --buildsystem=makefile -- -f Makefile.unx all cd src && make -j1 "INSTALL=install --strip-program=true" -f Makefile.unx all make[2]: Entering directory '/build/phylip-wkJX8o/phylip-3.697+dfsg/src' Building PHYLIP version 3.696 gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o clique.o clique.c clique.c: In function ‘getoptions’: clique.c:219:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 219 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ clique.c:249:15: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 249 | scanf("%ld%*[^\n]", &Cliqmin); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ clique.c:273:15: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 273 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o disc.o disc.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o phylip.o phylip.c In file included from /usr/include/stdio.h:867, from phylip.c:32: In function ‘fgets’, inlined from ‘getstryng’ at phylip.c:234:11, inlined from ‘readlong’ at phylip.c:464:5: /usr/include/x86_64-linux-gnu/bits/stdio2.h:263:9: warning: call to ‘__fgets_chk_warn’ declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 263 | return __fgets_chk_warn (__s, __bos (__s), __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘fgets’, inlined from ‘getstryng’ at phylip.c:234:11, inlined from ‘initcategs’ at phylip.c:600:5: /usr/include/x86_64-linux-gnu/bits/stdio2.h:263:9: warning: call to ‘__fgets_chk_warn’ declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 263 | return __fgets_chk_warn (__s, __bos (__s), __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘fgets’, inlined from ‘getstryng’ at phylip.c:234:11, inlined from ‘initprobcat’ at phylip.c:631:5: /usr/include/x86_64-linux-gnu/bits/stdio2.h:263:9: warning: call to ‘__fgets_chk_warn’ declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 263 | return __fgets_chk_warn (__s, __bos (__s), __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘fgets’, inlined from ‘getstryng’ at phylip.c:234:11, inlined from ‘initfreqs’ at phylip.c:1018:5: /usr/include/x86_64-linux-gnu/bits/stdio2.h:263:9: warning: call to ‘__fgets_chk_warn’ declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 263 | return __fgets_chk_warn (__s, __bos (__s), __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘fgets’, inlined from ‘getstryng’ at phylip.c:234:11, inlined from ‘readlong’ at phylip.c:464:5, inlined from ‘initnumlines’ at phylip.c:1123:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:263:9: warning: call to ‘__fgets_chk_warn’ declared with attribute warning: fgets called with bigger size than length of destination buffer [-Wattribute-warning] 263 | return __fgets_chk_warn (__s, __bos (__s), __n, __stream); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon clique.o disc.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o clique gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o consense.o consense.c consense.c: In function ‘getoptions’: consense.c:156:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 156 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ consense.c:197:15: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 197 | scanf("%ld%*[^\n]", &outgrno); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ consense.c:243:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 243 | scanf("%lf%*[^\n]", &mlfrac); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cons.o cons.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon consense.o phylip.o cons.o -lm -Wl,-z,relro -Wl,-z,now -o consense gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o contml.o contml.c contml.c: In function ‘getoptions’: contml.c:187:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 187 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cont.o cont.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon contml.o cont.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o contml gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o contrast.o contrast.c contrast.c: In function ‘getoptions’: contrast.c:140:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 140 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ contrast.c:168:15: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 168 | scanf("%ld%*[^\n]", &numtrees); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon contrast.o cont.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o contrast gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dnacomp.o dnacomp.c dnacomp.c: In function ‘getoptions’: dnacomp.c:176:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 176 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dnacomp.c:213:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 213 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seq.o seq.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon dnacomp.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o dnacomp gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dnadist.o dnadist.c dnadist.c: In function ‘getoptions’: dnadist.c:192:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 192 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dnadist.c:295:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 295 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ dnadist.c:355:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 355 | scanf("%lf%*[^\n]", &cvi); | ^~~~~~~~~~~~~~~~~~~~~~~~~ dnadist.c:366:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 366 | scanf("%lf%*[^\n]", &invarfrac); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon dnadist.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o dnadist gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dnainvar.o dnainvar.c dnainvar.c: In function ‘getoptions’: dnainvar.c:147:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 147 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dnainvar.c:170:15: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 170 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon dnainvar.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o dnainvar gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dnaml.o dnaml.c dnaml.c: In function ‘getoptions’: dnaml.c:304:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 304 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dnaml.c:407:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 407 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ dnaml.c:469:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 469 | scanf("%lf%*[^\n]", &cv); | ^~~~~~~~~~~~~~~~~~~~~~~~ dnaml.c:498:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 498 | scanf("%lf%*[^\n]", &invarfrac); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon dnaml.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o dnaml gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dnamlk.o dnamlk.c dnamlk.c: In function ‘menuconf’: dnamlk.c:330:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 330 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dnamlk.c:427:15: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 427 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ dnamlk.c:490:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 490 | scanf("%lf%*[^\n]", &cv); | ^~~~~~~~~~~~~~~~~~~~~~~~ dnamlk.c:519:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | scanf("%lf%*[^\n]", &invarfrac); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mlclock.o mlclock.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o printree.o printree.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon dnamlk.o seq.o phylip.o mlclock.o printree.o -lm -Wl,-z,relro -Wl,-z,now -o dnamlk gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dnamove.o dnamove.c dnamove.c: In function ‘getoptions’: dnamove.c:455:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 455 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dnamove.c: In function ‘yourtree’: dnamove.c:1456:9: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1456 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dnamove.c: In function ‘rearrange’: dnamove.c:1725:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1725 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dnamove.c: In function ‘redisplay’: dnamove.c:2176:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2176 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dnamove.c:2277:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2277 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o moves.o moves.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon dnamove.o seq.o moves.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o dnamove gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dnapars.o dnapars.c dnapars.c: In function ‘getoptions’: dnapars.c:204:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 204 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dnapars.c:253:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 253 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ dnapars.c:287:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 287 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ dnapars.c:306:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 306 | scanf("%ld%*[^\n]", &maxtrees); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon dnapars.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o dnapars gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dnapenny.o dnapenny.c dnapenny.c: In function ‘getoptions’: dnapenny.c:202:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 202 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dnapenny.c:232:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 232 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon dnapenny.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o dnapenny gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dolmove.o dolmove.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dollo.o dollo.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon dolmove.o disc.o moves.o dollo.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o dolmove gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dollop.o dollop.c dollop.c: In function ‘getoptions’: dollop.c:188:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 188 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dollop.c:237:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 237 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon dollop.o disc.o dollo.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o dollop gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dolpenny.o dolpenny.c dolpenny.c: In function ‘getoptions’: dolpenny.c:164:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 164 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ dolpenny.c:213:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 213 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon dolpenny.o disc.o dollo.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o dolpenny gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o factor.o factor.c factor.c: In function ‘getoptions’: factor.c:129:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 129 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ factor.c: In function ‘dotrees’: factor.c:402:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 402 | fscanf(infile, "%ld", &charnumber); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ factor.c: In function ‘main’: factor.c:576:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 576 | fscanf(infile, "%ld%ld", &neus, &nchars); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon factor.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o factor gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o fitch.o fitch.c fitch.c: In function ‘getoptions’: fitch.c:217:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 217 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dist.o dist.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon fitch.o dist.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o fitch gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gendist.o gendist.c gendist.c: In function ‘getoptions’: gendist.c:103:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 103 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ gendist.c: In function ‘getalleles’: gendist.c:216:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 216 | fscanf(infile, "%ld", &alleles[i]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gendist.c: In function ‘inputdata’: gendist.c:244:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 244 | fscanf(infile, "%lf", &x[i - 1][m - 1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon gendist.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o gendist gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kitsch.o kitsch.c kitsch.c: In function ‘getoptions’: kitsch.c:158:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 158 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ kitsch.c: In function ‘input_data’: kitsch.c:328:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 328 | fscanf(infile, "%lf", &x); | ^~~~~~~~~~~~~~~~~~~~~~~~~ kitsch.c:333:11: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 333 | fscanf(infile, "%ld", &n); | ^~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon kitsch.o dist.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o kitsch gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mix.o mix.c mix.c: In function ‘getoptions’: mix.c:198:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 198 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ mix.c:259:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 259 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o wagner.o wagner.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon mix.o disc.o wagner.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o mix gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o move.o move.c move.c: In function ‘getoptions’: move.c:206:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 206 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ move.c: In function ‘redisplay’: move.c:1477:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1477 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ move.c:1584:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1584 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon move.o disc.o moves.o wagner.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o move gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o neighbor.o neighbor.c neighbor.c: In function ‘getoptions’: neighbor.c:133:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 133 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon neighbor.o dist.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o neighbor gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pars.o pars.c pars.c: In function ‘getoptions’: pars.c:196:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 196 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ pars.c:241:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 241 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ pars.c:275:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 275 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ pars.c:294:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 294 | scanf("%ld%*[^\n]", &maxtrees); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o discrete.o discrete.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon pars.o discrete.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o pars gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o penny.o penny.c penny.c: In function ‘getoptions’: penny.c:179:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 179 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ penny.c:239:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 239 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon penny.o disc.o wagner.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o penny gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o proml.o proml.c proml.c: In function ‘getoptions’: proml.c:627:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 627 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ proml.c:735:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 735 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ proml.c:797:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 797 | scanf("%lf%*[^\n]", &cv); | ^~~~~~~~~~~~~~~~~~~~~~~~ proml.c:826:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 826 | scanf("%lf%*[^\n]", &invarfrac); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon proml.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o proml gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o promlk.o promlk.c promlk.c: In function ‘getoptions’: promlk.c:669:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 669 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ promlk.c:769:15: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 769 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ promlk.c:832:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 832 | scanf("%lf%*[^\n]", &cv); | ^~~~~~~~~~~~~~~~~~~~~~~~ promlk.c:861:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 861 | scanf("%lf%*[^\n]", &invarfrac); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon promlk.o seq.o phylip.o mlclock.o printree.o -lm -Wl,-z,relro -Wl,-z,now -o promlk gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o protdist.o protdist.c protdist.c: In function ‘protdist_inputnumbers’: protdist.c:441:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 441 | fscanf(infile, "%ld%ld", &spp, &chars); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ protdist.c: In function ‘getoptions’: protdist.c:587:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 587 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ protdist.c:634:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 634 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ protdist.c:718:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 718 | scanf("%lf%*[^\n]", &ease); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ protdist.c:729:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 729 | scanf("%lf%*[^\n]", &ttratio); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ protdist.c:741:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 741 | scanf("%lf%lf%lf%lf%*[^\n]", &freqa, &freqc, &freqg, &freqt); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ protdist.c:757:15: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 757 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ protdist.c:814:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 814 | scanf("%lf%*[^\n]", &cvi); | ^~~~~~~~~~~~~~~~~~~~~~~~~ protdist.c:825:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 825 | scanf("%lf%*[^\n]", &invarfrac); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon protdist.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o protdist gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o protpars.o protpars.c protpars.c: In function ‘getoptions’: protpars.c:385:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 385 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ protpars.c:430:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 430 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ protpars.c:473:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 473 | scanf("%c%*[^\n]", &ch2); | ^~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon protpars.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o protpars gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o restdist.o restdist.c restdist.c: In function ‘restdist_inputnumbers’: restdist.c:71:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 71 | fscanf(infile, "%ld%ld", &spp, &sites); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ restdist.c: In function ‘getoptions’: restdist.c:129:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 129 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ restdist.c:162:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 162 | scanf("%lf%*[^\n]", &sitelength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ restdist.c:207:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 207 | scanf("%lf%*[^\n]", &cvi); | ^~~~~~~~~~~~~~~~~~~~~~~~~ restdist.c: In function ‘inputoptions’: restdist.c:276:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 276 | fscanf(infile, "%ld%ld", &cursp, &curst); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ restdist.c:289:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 289 | fscanf(infile, "%*[ 0-9]"); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon restdist.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o restdist gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o restml.o restml.c restml.c: In function ‘restml_inputnumbers’: restml.c:329:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 329 | fscanf(infile, "%ld%ld%ld", &spp, &sites, &enzymes); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ restml.c: In function ‘getoptions’: restml.c:408:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 408 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ restml.c:443:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 443 | scanf("%ld%*[^\n]", &sitelength); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ restml.c: In function ‘inputoptions’: restml.c:659:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 659 | fscanf(infile, "%ld%ld%ld", &cursp, &curst, &curenz); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon restml.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o restml gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o retree.o retree.c retree.c: In function ‘getoptions’: retree.c:449:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 449 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ retree.c: In function ‘yourtree’: retree.c:1290:9: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1290 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ retree.c: In function ‘rearrange’: retree.c:1581:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1581 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ retree.c: In function ‘del_or_restore’: retree.c:2097:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2097 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ retree.c: In function ‘treewrite’: retree.c:2796:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2796 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ retree.c: In function ‘changelength’: retree.c:2971:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 2971 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ retree.c: In function ‘redisplay’: retree.c:3119:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3119 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ retree.c:3240:7: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 3240 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon retree.o moves.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o retree gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seqboot.o seqboot.c seqboot.c: In function ‘getoptions’: seqboot.c:277:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 277 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ seqboot.c:350:13: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 350 | scanf("%lf%*[^\n]", &fracsample); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seqboot.c:400:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 400 | scanf("%ld%*[^\n]", &blocksize); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seqboot.c:419:11: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 419 | scanf("%ld%*[^\n]", &reps); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ seqboot.c: In function ‘seqboot_inputnumbers’: seqboot.c:517:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(infile, "%ld%ld", &spp, &sites); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seqboot.c:521:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(infile, "%ld", &nenzymes); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ seqboot.c:529:7: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 529 | fscanf(infile, "%ld", &alleles[i]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon seqboot.o seq.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o seqboot gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -c -o treedist.o treedist.c treedist.c: In function ‘output_submenu’: treedist.c:877:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 877 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ treedist.c: In function ‘pairing_submenu’: treedist.c:928:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 928 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ treedist.c: In function ‘getoptions’: treedist.c:1089:5: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1089 | scanf("%c%*[^\n]", &ch); | ^~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon treedist.o cons.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o treedist gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -c drawgram.c drawgram.c: In function ‘drawgram’: drawgram.c:2111:9: warning: implicit declaration of function ‘makebox’ [-Wimplicit-function-declaration] 2111 | makebox(fontname,&xoffset,&yoffset,&scale,spp); | ^~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -c draw.c draw.c: In function ‘metricforfont’: draw.c:2603:53: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2603 | fontmetric[i-31] = timesroman_metric[i-31], | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2602:15: note: within this loop 2602 | for (i=31;i<256;++i) | ^~~ draw.c:2591:49: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2591 | fontmetric[i-31] = timesroman_metric[i-31], | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2590:11: note: within this loop 2590 | for (i=31;i<256;++i) | ^~~ draw.c:2551:48: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2551 | fontmetric[i-31] = timesbolditalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2550:5: note: within this loop 2550 | for (i=31;i<256;++i) | ^~~ draw.c:2548:42: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2548 | fontmetric[i-31] = timesbold_metric[i-31]; | ~~~~~~~~~~~~~~~~^~~~~~ draw.c:2547:5: note: within this loop 2547 | for (i=31;i<256;++i) | ^~~ draw.c:2545:44: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2545 | fontmetric[i-31] = timesitalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2544:5: note: within this loop 2544 | for (i=31;i<256;++i) | ^~~ draw.c:2542:43: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2542 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2541:5: note: within this loop 2541 | for (i=31;i<256;++i) | ^~~ draw.c:2539:43: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2539 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2538:5: note: within this loop 2538 | for (i=31;i<256;++i) | ^~~ draw.c:2536:46: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2536 | fontmetric[i-31] = helveticabold_metric[i-31]; | ~~~~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2535:5: note: within this loop 2535 | for (i=31;i<256;++i) | ^~~ draw.c:2532:42: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2532 | fontmetric[i-31] = helvetica_metric[i-31]; | ~~~~~~~~~~~~~~~~^~~~~~ draw.c:2531:5: note: within this loop 2531 | for (i=31;i<256;++i) | ^~~ draw.c:2532:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2532 | fontmetric[i-31] = helvetica_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2536:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2536 | fontmetric[i-31] = helveticabold_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2539:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2539 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2542:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2542 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2545:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2545 | fontmetric[i-31] = timesitalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2548:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2548 | fontmetric[i-31] = timesbold_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2551:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2551 | fontmetric[i-31] = timesbolditalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -c draw2.c gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon draw.o draw2.o drawgram.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o drawgram gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -shared -fPIC -c drawtree.c drawtree.c: In function ‘drawtree’: drawtree.c:3017:9: warning: implicit declaration of function ‘makebox’ [-Wimplicit-function-declaration] 3017 | makebox(fontname,&xoffset,&yoffset,&scale,spp); | ^~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon draw.o draw2.o drawtree.o phylip.o -lm -Wl,-z,relro -Wl,-z,now -o drawtree gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -o libdrawgram.so -Wl,-soname,libdrawgram.so -shared -fPIC drawgram.c draw.c draw2.c phylip.c -lm -Wl,-z,relro -Wl,-z,now drawgram.c: In function ‘drawgram’: drawgram.c:2111:9: warning: implicit declaration of function ‘makebox’ [-Wimplicit-function-declaration] 2111 | makebox(fontname,&xoffset,&yoffset,&scale,spp); | ^~~~~~~ draw.c: In function ‘metricforfont’: draw.c:2603:53: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2603 | fontmetric[i-31] = timesroman_metric[i-31], | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2602:15: note: within this loop 2602 | for (i=31;i<256;++i) | ^~~ draw.c:2591:49: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2591 | fontmetric[i-31] = timesroman_metric[i-31], | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2590:11: note: within this loop 2590 | for (i=31;i<256;++i) | ^~~ draw.c:2551:48: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2551 | fontmetric[i-31] = timesbolditalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2550:5: note: within this loop 2550 | for (i=31;i<256;++i) | ^~~ draw.c:2548:42: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2548 | fontmetric[i-31] = timesbold_metric[i-31]; | ~~~~~~~~~~~~~~~~^~~~~~ draw.c:2547:5: note: within this loop 2547 | for (i=31;i<256;++i) | ^~~ draw.c:2545:44: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2545 | fontmetric[i-31] = timesitalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2544:5: note: within this loop 2544 | for (i=31;i<256;++i) | ^~~ draw.c:2542:43: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2542 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2541:5: note: within this loop 2541 | for (i=31;i<256;++i) | ^~~ draw.c:2539:43: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2539 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2538:5: note: within this loop 2538 | for (i=31;i<256;++i) | ^~~ draw.c:2536:46: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2536 | fontmetric[i-31] = helveticabold_metric[i-31]; | ~~~~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2535:5: note: within this loop 2535 | for (i=31;i<256;++i) | ^~~ draw.c:2532:42: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2532 | fontmetric[i-31] = helvetica_metric[i-31]; | ~~~~~~~~~~~~~~~~^~~~~~ draw.c:2531:5: note: within this loop 2531 | for (i=31;i<256;++i) | ^~~ draw.c:2532:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2532 | fontmetric[i-31] = helvetica_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2536:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2536 | fontmetric[i-31] = helveticabold_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2539:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2539 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2542:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2542 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2545:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2545 | fontmetric[i-31] = timesitalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2548:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2548 | fontmetric[i-31] = timesbold_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2551:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2551 | fontmetric[i-31] = timesbolditalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -O2 -fdebug-prefix-map=/build/phylip-wkJX8o/phylip-3.697+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -DUNX -fomit-frame-pointer -fcommon -o libdrawtree.so -Wl,-soname,libdrawtree.so -shared -fPIC drawtree.c draw.c draw2.c phylip.c -lm -Wl,-z,relro -Wl,-z,now drawtree.c: In function ‘drawtree’: drawtree.c:3017:9: warning: implicit declaration of function ‘makebox’ [-Wimplicit-function-declaration] 3017 | makebox(fontname,&xoffset,&yoffset,&scale,spp); | ^~~~~~~ draw.c: In function ‘metricforfont’: draw.c:2603:53: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2603 | fontmetric[i-31] = timesroman_metric[i-31], | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2602:15: note: within this loop 2602 | for (i=31;i<256;++i) | ^~~ draw.c:2591:49: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2591 | fontmetric[i-31] = timesroman_metric[i-31], | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2590:11: note: within this loop 2590 | for (i=31;i<256;++i) | ^~~ draw.c:2551:48: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2551 | fontmetric[i-31] = timesbolditalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2550:5: note: within this loop 2550 | for (i=31;i<256;++i) | ^~~ draw.c:2548:42: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2548 | fontmetric[i-31] = timesbold_metric[i-31]; | ~~~~~~~~~~~~~~~~^~~~~~ draw.c:2547:5: note: within this loop 2547 | for (i=31;i<256;++i) | ^~~ draw.c:2545:44: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2545 | fontmetric[i-31] = timesitalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2544:5: note: within this loop 2544 | for (i=31;i<256;++i) | ^~~ draw.c:2542:43: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2542 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2541:5: note: within this loop 2541 | for (i=31;i<256;++i) | ^~~ draw.c:2539:43: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2539 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2538:5: note: within this loop 2538 | for (i=31;i<256;++i) | ^~~ draw.c:2536:46: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2536 | fontmetric[i-31] = helveticabold_metric[i-31]; | ~~~~~~~~~~~~~~~~~~~~^~~~~~ draw.c:2535:5: note: within this loop 2535 | for (i=31;i<256;++i) | ^~~ draw.c:2532:42: warning: iteration 224 invokes undefined behavior [-Waggressive-loop-optimizations] 2532 | fontmetric[i-31] = helvetica_metric[i-31]; | ~~~~~~~~~~~~~~~~^~~~~~ draw.c:2531:5: note: within this loop 2531 | for (i=31;i<256;++i) | ^~~ draw.c:2532:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2532 | fontmetric[i-31] = helvetica_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2536:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2536 | fontmetric[i-31] = helveticabold_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2539:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2539 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2542:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2542 | fontmetric[i-31] = timesroman_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2545:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2545 | fontmetric[i-31] = timesitalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2548:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2548 | fontmetric[i-31] = timesbold_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ draw.c:2551:24: warning: ‘__builtin_memcpy’ reading 450 bytes from a region of size 448 [-Wstringop-overflow=] 2551 | fontmetric[i-31] = timesbolditalic_metric[i-31]; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Finished compiling. make[2]: Leaving directory '/build/phylip-wkJX8o/phylip-3.697+dfsg/src' cp debian/build.xml build.xml ant Buildfile: /build/phylip-wkJX8o/phylip-3.697+dfsg/build.xml compile: [mkdir] Created dir: /build/phylip-wkJX8o/phylip-3.697+dfsg/build/classes [mkdir] Created dir: /build/phylip-wkJX8o/phylip-3.697+dfsg/dist [javac] /build/phylip-wkJX8o/phylip-3.697+dfsg/build.xml:39: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds [javac] Compiling 11 source files to /build/phylip-wkJX8o/phylip-3.697+dfsg/build/classes [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. jar: [jar] Building jar: /build/phylip-wkJX8o/phylip-3.697+dfsg/dist/DrawTree.jar BUILD SUCCESSFUL Total time: 19 seconds make[1]: Leaving directory '/build/phylip-wkJX8o/phylip-3.697+dfsg' jh_build -a -O--no-parallel dh_auto_test -a -O--no-parallel create-stamp debian/debhelper-build-stamp dh_testroot -a -O--no-parallel dh_prep -a -O--no-parallel debian/rules override_dh_auto_install make[1]: Entering directory '/build/phylip-wkJX8o/phylip-3.697+dfsg' dh_auto_install --sourcedirectory=src --buildsystem=makefile -- -f Makefile.unx install DATADIR=../fonts cd src && make -j1 install DESTDIR=/build/phylip-wkJX8o/phylip-3.697\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" -f Makefile.unx install DATADIR=../fonts make[2]: Entering directory '/build/phylip-wkJX8o/phylip-3.697+dfsg/src' Building PHYLIP version 3.696 Finished compiling. Installing PHYLIP v3.6 binaries in ../exe #@cp libdrawgram.so libdrawtree.so ../exe #@cp javajars/DrawGram.jar javajars/DrawTree.jar javajars/DrawGramJava.unx javajars/DrawTreeJava.unx ../exe Installing font files in ../fonts Finished installation. Removing object files to save space Finished removing object files. Now will remove executable files from the current directory, but not from the executables directory. (If some are not here, the makefile will terminate with an error message but this is not a problem) Removing executables from this directory Finished cleanup. Done. make[2]: 'install' is up to date. make[2]: Leaving directory '/build/phylip-wkJX8o/phylip-3.697+dfsg/src' make[1]: Leaving directory '/build/phylip-wkJX8o/phylip-3.697+dfsg' dh_install -a -O--no-parallel jh_installjavadoc -a -O--no-parallel dh_installdocs -a -O--no-parallel dh_installchangelogs -a -O--no-parallel debian/rules override_dh_installexamples make[1]: Entering directory '/build/phylip-wkJX8o/phylip-3.697+dfsg' dh_installexamples find debian -type f -name "*.txt" -exec chmod a-x \{\} \; make[1]: Leaving directory '/build/phylip-wkJX8o/phylip-3.697+dfsg' dh_installman -a -O--no-parallel dh_installsystemduser -a -O--no-parallel dh_lintian -a -O--no-parallel dh_perl -a -O--no-parallel dh_link -a -O--no-parallel jh_installlibs -a -O--no-parallel jh_classpath -a -O--no-parallel jh_manifest -a -O--no-parallel jh_exec -a -O--no-parallel jh_depends -a -O--no-parallel dh_strip_nondeterminism -a -O--no-parallel dh_compress -a -O--no-parallel dh_fixperms -a -O--no-parallel dh_missing -a -O--no-parallel dh_dwz -a -a -O--no-parallel dh_strip -a -a -O--no-parallel dh_makeshlibs -a -a -O--no-parallel dh_shlibdeps -a -a -O--no-parallel dh_installdeb -a -O--no-parallel dh_gencontrol -a -O--no-parallel dpkg-gencontrol: warning: package phylip: substitution variable ${java:Depends} unused, but is defined dpkg-gencontrol: warning: package phylip: substitution variable ${java:Depends} unused, but is defined dh_md5sums -a -O--no-parallel dh_builddeb -a -O--no-parallel dpkg-deb: building package 'phylip-dbgsym' in '../phylip-dbgsym_3.697+dfsg-2_amd64.deb'. dpkg-deb: building package 'phylip' in '../phylip_3.697+dfsg-2_amd64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../phylip_3.697+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/phylip-wkJX8o /tmp/phylip-3.697+dfsg-2ex_i_1wk I: cleaning package lists and apt cache... W: deleting files in /tmp: hsperfdata_builduser W: deleting files in /tmp: hsperfdata_root I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.ord6C6y_Lq... I: success in 782.6785 seconds md5: phylip-dbgsym_3.697+dfsg-2_amd64.deb: OK md5: phylip_3.697+dfsg-2_amd64.deb: OK sha1: phylip-dbgsym_3.697+dfsg-2_amd64.deb: OK sha1: phylip_3.697+dfsg-2_amd64.deb: OK sha256: phylip-dbgsym_3.697+dfsg-2_amd64.deb: OK sha256: phylip_3.697+dfsg-2_amd64.deb: OK Checksums: OK