Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/p/petsc/petsc_3.16.6+dfsg1-1_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/petsc-3.16.6+dfsg1-1hx06gv27/petsc_3.16.6+dfsg1-1_all.buildinfo Get source package info: petsc=3.16.6+dfsg1-1 Source URL: http://snapshot.notset.fr/mr/package/petsc/3.16.6+dfsg1-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=adduser=3.121 autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6 binutils=2.38-3 binutils-common=2.38-3 binutils-x86-64-linux-gnu=2.38-3 bsdextrautils=2.37.3-1+b1 bsdutils=1:2.37.3-1+b1 build-essential=12.9 bzip2=1.0.8-5 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.2.0-19 dash=0.5.11+git20210903+057cd650a4ed-8 debconf=1.5.79 debhelper=13.6 debianutils=5.7-0.1 dh-autoreconf=20 dh-fortran-mod=0.21 dh-python=5.20220403 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.7 dpkg-dev=1.21.7 dwz=0.14-1 file=1:5.41-3 findutils=4.9.0-2 fonts-mathjax=2.7.9+dfsg-1 g++=4:11.2.0-2 g++-11=11.2.0-19 gcc=4:11.2.0-2 gcc-11=11.2.0-19 gcc-11-base=11.2.0-19 gcc-12-base=12-20220319-1 gdb=10.1-2+b1 gettext=0.21-6 gettext-base=0.21-6 gfortran=4:11.2.0-2 gfortran-11=11.2.0-19 grep=3.7-1 groff-base=1.22.4-8 gzip=1.10-4 hostname=3.23 ibverbs-providers=39.0-1+b1 init-system-helpers=1.62 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libaec-dev=1.0.6-1 libaec0=1.0.6-1 libamd2=1:5.11.0+dfsg-1 libarchive-zip-perl=1.68-1 libasan6=11.2.0-19 libatomic1=12-20220319-1 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libbabeltrace1=1.5.8-2+b1 libbinutils=2.38-3 libblas-dev=3.10.0-2 libblas3=3.10.0-2 libblas64-3=3.10.0-2 libblkid1=2.37.3-1+b1 libboost-regex1.74.0=1.74.0-14 libbrotli1=1.0.9-2+b3 libbsd0=0.11.6-1 libbtf1=1:5.11.0+dfsg-1 libbz2-1.0=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dbg=2.33-7 libc6-dev=2.33-7 libcamd2=1:5.11.0+dfsg-1 libcap-ng0=0.7.9-2.2+b2 libcap2=1:2.44-1 libcbor0.8=0.8.0-2 libcc1-0=12-20220319-1 libccolamd2=1:5.11.0+dfsg-1 libcholmod3=1:5.11.0+dfsg-1 libcolamd2=1:5.11.0+dfsg-1 libcom-err2=1.46.5-2 libcombblas1.16.0=1.6.2-8 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38-3 libctf0=2.38-3 libcurl3-gnutls=7.82.0-2 libcurl4=7.82.0-2 libcurl4-openssl-dev=7.82.0-2 libcxsparse3=1:5.11.0+dfsg-1 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.261 libdebhelper-perl=13.6 libdebuginfod-common=0.186-1 libdebuginfod1=0.186-1 libdpkg-perl=1.21.7 libdw1=0.186-1 libedit2=3.1-20210910-1 libelf1=0.186-1 libevent-2.1-7=2.1.12-stable-3 libevent-core-2.1-7=2.1.12-stable-3 libevent-dev=2.1.12-stable-3 libevent-extra-2.1-7=2.1.12-stable-3 libevent-openssl-2.1-7=2.1.12-stable-3 libevent-pthreads-2.1-7=2.1.12-stable-3 libexpat1=2.4.8-1 libfabric1=1.11.0-3 libffi8=3.4.2-4 libfftw3-bin=3.3.8-2 libfftw3-dev=3.3.8-2 libfftw3-double3=3.3.8-2 libfftw3-long3=3.3.8-2 libfftw3-mpi-dev=3.3.8-2 libfftw3-mpi3=3.3.8-2 libfftw3-quad3=3.3.8-2 libfftw3-single3=3.3.8-2 libfido2-1=1.10.0-1 libfile-libmagic-perl=1.23-1+b2 libfile-stripnondeterminism-perl=1.13.0-1 libgcc-11-dev=11.2.0-19 libgcc-s1=12-20220319-1 libgcrypt20=1.10.1-2 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgfortran-11-dev=11.2.0-19 libgfortran5=12-20220319-1 libglib2.0-0=2.72.0-1+b1 libgmp10=2:6.2.1+dfsg-3 libgnutls30=3.7.3-4+b1 libgomp1=12-20220319-1 libgpg-error0=1.43-3 libgssapi-krb5-2=1.19.2-2+b1 libhdf5-mpi-dev=1.10.7+repack-4 libhdf5-openmpi-103-1=1.10.7+repack-4 libhdf5-openmpi-cpp-103-1=1.10.7+repack-4 libhdf5-openmpi-dev=1.10.7+repack-4 libhdf5-openmpi-fortran-102=1.10.7+repack-4 libhdf5-openmpi-hl-100=1.10.7+repack-4 libhdf5-openmpi-hl-cpp-100=1.10.7+repack-4 libhdf5-openmpi-hl-fortran-100=1.10.7+repack-4 libhogweed6=3.7.3-1 libhwloc-dev=2.7.1-1 libhwloc-plugins=2.7.1-1 libhwloc15=2.7.1-1 libhypre-2.23.0=2.23.0-2 libhypre-dev=2.23.0-2 libhypre64m-2.23.0=2.23.0-2 libhypre64m-dev=2.23.0-2 libibverbs-dev=39.0-1+b1 libibverbs1=39.0-1+b1 libicu67=67.1-7 libidn2-0=2.3.2-2 libipt2=2.0.5-1 libisl23=0.24-2 libitm1=12-20220319-1 libjpeg-dev=1:2.1.2-1 libjpeg62-turbo=1:2.1.2-1 libjpeg62-turbo-dev=1:2.1.2-1 libjs-jquery=3.6.0+dfsg+~3.5.13-1 libjs-jquery-ui=1.13.1+dfsg-1 libjs-mathjax=2.7.9+dfsg-1 libjs-sphinxdoc=4.5.0-1 libjs-underscore=1.13.2~dfsg-2 libk5crypto3=1.19.2-2+b1 libkeyutils1=1.6.1-3 libklu1=1:5.11.0+dfsg-1 libkrb5-3=1.19.2-2+b1 libkrb5support0=1.19.2-2+b1 liblapack-dev=3.10.0-2 liblapack3=3.10.0-2 liblapack64-3=3.10.0-2 libldap-2.5-0=2.5.11+dfsg-1 libldl2=1:5.11.0+dfsg-1 liblsan0=12-20220319-1 libltdl-dev=2.4.7-3 libltdl7=2.4.7-3 liblz4-1=1.9.3-2 liblzma5=5.2.5-2 libmagic-mgc=1:5.41-3 libmagic1=1:5.41-3 libmd0=1.0.4-1 libmetis5=5.1.0.dfsg-7 libmongoose2=1:5.11.0+dfsg-1 libmount1=2.37.3-1+b1 libmpc3=1.2.1-2 libmpdec3=2.5.1-2 libmpfr6=4.1.0-3 libmumps-5.4=5.4.1-2+b1 libmumps-64pord-5.4=5.4.1-2+b1 libmumps-dev=5.4.1-2+b1 libmumps-headers-dev=5.4.1-2 libmumps64-dev=5.4.1-2+b1 libncursesw6=6.3-2 libnettle8=3.7.3-1 libnghttp2-14=1.43.0-1 libnl-3-200=3.5.0-0.1 libnl-3-dev=3.5.0-0.1 libnl-route-3-200=3.5.0-0.1 libnl-route-3-dev=3.5.0-0.1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libnuma-dev=2.0.14-3 libnuma1=2.0.14-3 libopenblas64-0=0.3.20+ds-1 libopenblas64-0-pthread=0.3.20+ds-1 libopenblas64-dev=0.3.20+ds-1 libopenblas64-pthread-dev=0.3.20+ds-1 libopenmpi-dev=4.1.3-1 libopenmpi3=4.1.3-1 libp11-kit0=0.24.0-6 libpam-modules=1.4.0-11 libpam-modules-bin=1.4.0-11 libpam-runtime=1.4.0-11 libpam0g=1.4.0-11 libpciaccess0=0.16-3 libpcre2-8-0=10.39-3 libpcre3=2:8.39-14 libperl5.34=5.34.0-3 libpipeline1=1.5.5-1 libpmix-dev=4.1.2-2 libpmix2=4.1.2-2 libpsl5=0.21.0-1.2 libpsm-infinipath1=3.3+20.604758e7-6.1 libpsm2-2=11.2.185-1 libpthread-stubs0-dev=0.4-1 libptscotch-7.0=7.0.1-2 libptscotch-dev=7.0.1-2 libpython3-stdlib=3.10.4-1 libpython3.10=3.10.4-3 libpython3.10-minimal=3.10.4-3 libpython3.10-stdlib=3.10.4-3 libquadmath0=12-20220319-1 librbio2=1:5.11.0+dfsg-1 librdmacm1=39.0-1+b1 libreadline8=8.1.2-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.28+dfsg-2+b1 libsasl2-modules-db=2.1.28+dfsg-2+b1 libscalapack-mpi-dev=2.2.1-1 libscalapack-openmpi-dev=2.2.1-1 libscalapack-openmpi2.2=2.2.1-1 libscotch-7.0=7.0.1-2 libscotch-dev=7.0.1-2 libseccomp2=2.5.3-2 libselinux1=3.3-1+b2 libsemanage-common=3.3-1 libsemanage2=3.3-1+b2 libsepol2=3.3-1 libsigsegv2=2.14-1 libsliplu1=1:5.11.0+dfsg-1 libsmartcols1=2.37.3-1+b1 libsource-highlight-common=3.1.9-4.1 libsource-highlight4v5=3.1.9-4.1 libspqr2=1:5.11.0+dfsg-1 libsqlite3-0=3.38.2-1 libssh2-1=1.10.0-3 libssl-dev=1.1.1n-1 libssl1.1=1.1.1n-1 libstdc++-11-dev=11.2.0-19 libstdc++6=12-20220319-1 libsub-override-perl=0.09-2 libsuitesparse-dev=1:5.11.0+dfsg-1 libsuitesparseconfig5=1:5.11.0+dfsg-1 libsuperlu-dev=5.3.0+dfsg1-2 libsuperlu-dist-dev=7.2.0+dfsg1-2+b1 libsuperlu-dist7=7.2.0+dfsg1-2+b1 libsuperlu5=5.3.0+dfsg1-2 libsystemd0=250.4-1 libsz2=1.0.6-1 libtasn1-6=4.18.0-4 libtinfo6=6.3-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.7-3 libtrilinos-amesos-13.2=13.2.0-1+b1 libtrilinos-aztecoo-13.2=13.2.0-1+b1 libtrilinos-aztecoo-dev=13.2.0-1+b1 libtrilinos-epetra-13.2=13.2.0-1+b1 libtrilinos-epetraext-13.2=13.2.0-1+b1 libtrilinos-galeri-13.2=13.2.0-1+b1 libtrilinos-ifpack-13.2=13.2.0-1+b1 libtrilinos-kokkos-13.2=13.2.0-1+b1 libtrilinos-ml-13.2=13.2.0-1+b1 libtrilinos-ml-dev=13.2.0-1+b1 libtrilinos-teuchos-13.2=13.2.0-1+b1 libtrilinos-trilinosss-13.2=13.2.0-1+b1 libtrilinos-trilinosss-dev=13.2.0-1+b1 libtrilinos-triutils-13.2=13.2.0-1+b1 libtrilinos-zoltan-13.2=13.2.0-1+b1 libtrilinos-zoltan-dev=13.2.0-1+b1 libtsan0=11.2.0-19 libubsan1=12-20220319-1 libuchardet0=0.0.7-1 libucx0=1.12.1-1 libudev1=250.4-1 libumfpack5=1:5.11.0+dfsg-1 libunicode-escape-perl=0.0.2-4.1 libunicode-string-perl=2.10-1+b7 libunistring2=1.0-1 libuuid1=2.37.3-1+b1 libx11-6=2:1.7.5-1 libx11-data=2:1.7.5-1 libx11-dev=2:1.7.5-1 libxau-dev=1:1.0.9-1 libxau6=1:1.0.9-1 libxcb1=1.14-3 libxcb1-dev=1.14-3 libxdmcp-dev=1:1.1.2-3 libxdmcp6=1:1.1.2-3 libxext6=2:1.3.4-1 libxml2=2.9.13+dfsg-1 libxnvctrl0=470.103.01-1 libxxhash0=0.8.1-1 libyaml-0-2=0.2.2-1 libyaml-dev=0.2.2-1 libzstd1=1.4.10+dfsg-1 linux-libc-dev=5.16.18-1 login=1:4.11.1+dfsg1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.2-1 mawk=1.3.4.20200120-3+b1 media-types=7.0.0 mpi-default-bin=1.14 mpi-default-dev=1.14 ncurses-base=6.3-2 ncurses-bin=6.3-2 ocl-icd-libopencl1=2.2.14-3 ocl-icd-opencl-dev=2.2.14-3 opencl-c-headers=3.0~2022.01.04-1 opencl-clhpp-headers=3.0~2.0.16-1 openmpi-bin=4.1.3-1 openmpi-common=4.1.3-1 openssh-client=1:8.9p1-3 passwd=1:4.11.1+dfsg1-2 patch=2.7.6-7 perl=5.34.0-3 perl-base=5.34.0-3 perl-modules-5.34=5.34.0-3 pkg-config=0.29.2-1 po-debconf=1.0.21+nmu1 python3=3.10.4-1 python3-distutils=3.9.12-1 python3-lib2to3=3.9.12-1 python3-minimal=3.10.4-1 python3.10=3.10.4-3 python3.10-minimal=3.10.4-3 readline-common=8.1.2-1 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sphinx-common=4.5.0-1 sysvinit-utils=3.01-1 tar=1.34+dfsg-1 trilinos-dev=13.2.0-1+b1 ucf=3.0043 util-linux=2.37.3-1+b1 valgrind=1:3.18.1-1 valgrind-mpi=1:3.18.1-1 x11proto-dev=2021.5-1 xorg-sgml-doctools=1:1.11-1.1 xtrans-dev=1.4.0-1 xz-utils=5.2.5-2 zlib1g=1:1.2.11.dfsg-4 zlib1g-dev=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220413T150025Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220413T150025Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220408T211210Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d petsc=3.16.6+dfsg1-1 && mkdir -p /build/petsc-Zv7BZL && dpkg-source --no-check -x /*.dsc /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 && chown -R builduser:builduser /build/petsc-Zv7BZL" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1649451661" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/petsc-Zv7BZL /tmp/petsc-3.16.6+dfsg1-1hx06gv27 bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220408T211210Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.2a9SBQHyzT as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.2a9SBQHyzT Reading package lists... Building dependency tree... util-linux is already the newest version (2.37.3-1+b1). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 135 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220408T211210Z unstable/main amd64 libfakeroot amd64 1.28-1 [48.2 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220408T211210Z unstable/main amd64 fakeroot amd64 1.28-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 135 kB in 0s (1048 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4701 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.28-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.28-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.28-1_amd64.deb ... Unpacking fakeroot (1.28-1) ... Setting up libfakeroot:amd64 (1.28-1) ... Setting up fakeroot (1.28-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220413T150025Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220413T150025Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220408T211210Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.2a9SBQHyzT Get:1 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm InRelease [130 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20220408T211210Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm/main Sources [12.0 MB] Get:4 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm/main amd64 Packages [11.4 MB] Fetched 23.5 MB in 20s (1188 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.2a9SBQHyzT I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d petsc=3.16.6+dfsg1-1 && mkdir -p /build/petsc-Zv7BZL && dpkg-source --no-check -x /*.dsc /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 && chown -R builduser:builduser /build/petsc-Zv7BZL"' exec /tmp/mmdebstrap.2a9SBQHyzT Reading package lists... NOTICE: 'petsc' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/petsc.git Please use: git clone https://salsa.debian.org/science-team/petsc.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 34.5 MB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm/main petsc 3.16.6+dfsg1-1 (dsc) [4539 B] Get:2 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm/main petsc 3.16.6+dfsg1-1 (tar) [34.4 MB] Get:3 http://snapshot.notset.fr/archive/debian/20220413T150025Z bookworm/main petsc 3.16.6+dfsg1-1 (diff) [111 kB] Fetched 34.5 MB in 27s (1279 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'petsc_3.16.6+dfsg1-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting petsc in /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 dpkg-source: info: unpacking petsc_3.16.6+dfsg1.orig.tar.xz dpkg-source: info: unpacking petsc_3.16.6+dfsg1-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying build-no-rpath.patch dpkg-source: info: applying docs.patch dpkg-source: info: applying lib-versions.patch dpkg-source: info: applying sprng-2.patch dpkg-source: info: applying clean-no-double-colon.patch dpkg-source: info: applying nocleanup.patch dpkg-source: info: applying soname_extension dpkg-source: info: applying hurd.patch dpkg-source: info: applying label_tests.patch dpkg-source: info: applying downloaded_SAWs.js.patch dpkg-source: info: applying configure_python3.patch dpkg-source: info: applying petscmatmod_split.patch dpkg-source: info: applying clean_tests.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1649451661" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.2a9SBQHyzT dpkg-buildpackage: info: source package petsc dpkg-buildpackage: info: source version 3.16.6+dfsg1-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . fakeroot debian/rules clean dh clean --with python3,fortran_mod,sphinxdoc debian/rules override_dh_auto_clean make[1]: Entering directory '/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1' if [ -d x86_64-linux-gnu-real-debug -a -f x86_64-linux-gnu-real-debug/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc-real3.16-dbg -ppetsc3.16-doc -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real-debug; \ fi if [ -d x86_64-linux-gnu-real -a -f x86_64-linux-gnu-real/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc-real3.16-dev -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real; \ fi if [ -d x86_64-linux-gnu-complex -a -f x86_64-linux-gnu-complex/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc-complex3.16-dev -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-complex; \ fi if [ -d x86_64-linux-gnu-complex-debug -a -f x86_64-linux-gnu-complex-debug/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc-complex3.16-dbg -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-complex-debug; \ fi if [ -d x86_64-linux-gnu-real-debug -a -f x86_64-linux-gnu-real-debug/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc-real3.16-dbg -ppetsc3.16-doc -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real-debug; \ fi if [ -d x86_64-linux-gnu-real-64 -a -f x86_64-linux-gnu-real-64/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc64-real3.16-dev -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real-64; \ fi if [ -d x86_64-linux-gnu-complex-64 -a -f x86_64-linux-gnu-complex-64/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc64-complex3.16-dev -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-complex-64; \ fi if [ -d x86_64-linux-gnu-complex-debug-64 -a -f x86_64-linux-gnu-complex-debug-64/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc64-complex3.16-dbg -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-complex-debug-64; \ fi make[1]: Leaving directory '/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1' debian/rules override_dh_clean make[1]: Entering directory '/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1' if [ -d x86_64-linux-gnu-real-debug -a -f x86_64-linux-gnu-real-debug/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc-real3.16-dbg -ppetsc3.16-doc -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real-debug; \ fi if [ -d x86_64-linux-gnu-real -a -f x86_64-linux-gnu-real/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc-real3.16-dev -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real; \ fi if [ -d x86_64-linux-gnu-complex -a -f x86_64-linux-gnu-complex/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc-complex3.16-dev -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-complex; \ fi if [ -d x86_64-linux-gnu-complex-debug -a -f x86_64-linux-gnu-complex-debug/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc-complex3.16-dbg -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-complex-debug; \ fi if [ -d x86_64-linux-gnu-real-debug -a -f x86_64-linux-gnu-real-debug/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc-real3.16-dbg -ppetsc3.16-doc -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real-debug; \ fi if [ -d x86_64-linux-gnu-real-64 -a -f x86_64-linux-gnu-real-64/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc64-real3.16-dev -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real-64; \ fi if [ -d x86_64-linux-gnu-complex-64 -a -f x86_64-linux-gnu-complex-64/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc64-complex3.16-dev -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-complex-64; \ fi if [ -d x86_64-linux-gnu-complex-debug-64 -a -f x86_64-linux-gnu-complex-debug-64/lib/petsc/conf/petscrules ]; then \ dh_auto_clean -plibpetsc64-complex3.16-dbg -- \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-complex-debug-64; \ fi dh_clean rm -f *.log *.log.bkp configtest.mod rm -f src/vec/vec/tests/x.h5 rm -f lib/petsc/conf/petscvariables rm -f reconfigure-*.py find config -name *.pyc | xargs rm -f rm -f CMakeLists.txt simplemake rm -rf x86_64-linux-gnu-real x86_64-linux-gnu-real-debug x86_64-linux-gnu-complex x86_64-linux-gnu-complex-debug \ x86_64-linux-gnu-real-64 x86_64-linux-gnu-real-debug-64 x86_64-linux-gnu-complex-64 x86_64-linux-gnu-complex-debug-64 make[1]: Leaving directory '/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1' debian/rules build-indep dh build-indep --with python3,fortran_mod,sphinxdoc dh_update_autotools_config -i dh_autoreconf -i debian/rules override_dh_auto_configure make[1]: Entering directory '/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1' ===================== libpetsc-real3.16-dbg ===================== set -e; \ if dh_auto_configure -plibpetsc-real3.16-dbg -ppetsc3.16-doc -- \ --with-debugging=1 \ --shared-library-extension=_real \ --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include=[] --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS="-Wl,--no-as-needed" \ --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib="-lHYPRE" \ --with-mumps=1 --with-mumps-include=[] --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" \ --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" \ --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu \ --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist \ --with-ml=1 --with-ml-include=/usr/include/trilinos --with-ml-lib=-ltrilinos_ml \ --with-zoltan=1 --with-zoltan-include=/usr/include/trilinos --with-zoltan-lib=-ltrilinos_zoltan \ --prefix=/usr/lib/petscdir/petsc3.16/x86_64-linux-gnu-real-debug \ --PETSC_ARCH=x86_64-linux-gnu-real-debug \ CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" \ CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS="w"; then \ : ; \ else \ cat configure.log; \ false; \ fi ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --with-debugging=1 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C\+\+11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch "--with-ptscotch-lib=-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include=\[\] "--with-fftw-lib=-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi "--with-hdf5-lib=-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include=\[\] "--with-mumps-lib=-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse "--with-suitesparse-lib=-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --with-ml=1 --with-ml-include=/usr/include/trilinos --with-ml-lib=-ltrilinos_ml --with-zoltan=1 --with-zoltan-include=/usr/include/trilinos --with-zoltan-lib=-ltrilinos_zoltan --prefix=/usr/lib/petscdir/petsc3.16/x86_64-linux-gnu-real-debug --PETSC_ARCH=x86_64-linux-gnu-real-debug "CFLAGS=-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" "CXXFLAGS=-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" "FCFLAGS=-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" "FFLAGS=-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" "CPPFLAGS=-Wdate-time -D_FORTIFY_SOURCE=2" "LDFLAGS=-Wl,-z,relro -fPIC" MAKEFLAGS=w ============================================================================================= Configuring PETSc to compile on your system ============================================================================================= TESTING: configureExternalPackagesDir from config.framework(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/framework.py:1031) TESTING: configureDebuggers from config.utilities.debuggers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/debuggers.py:21) TESTING: configureDirectories from PETSc.options.petscdir(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/petscdir.py:23) TESTING: getDatafilespath from PETSc.options.dataFilesPath(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/dataFilesPath.py:29) TESTING: configureGit from config.sourceControl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/sourceControl.py:24) TESTING: configureMercurial from config.sourceControl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/sourceControl.py:35) TESTING: configureInstallationMethod from PETSc.options.petscclone(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/petscclone.py:20) TESTING: setNativeArchitecture from PETSc.options.arch(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/arch.py:31) TESTING: configureArchitecture from PETSc.options.arch(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/arch.py:43) TESTING: setInstallDir from PETSc.options.installDir(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/installDir.py:32) TESTING: saveReconfigure from PETSc.options.installDir(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/installDir.py:76) TESTING: cleanConfDir from PETSc.options.installDir(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/installDir.py:69) TESTING: configureInstallDir from PETSc.options.installDir(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/installDir.py:53) TESTING: restoreReconfigure from PETSc.options.installDir(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/installDir.py:89) TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/externalpackagesdir.py:15) TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/externalpackagesdir.py:22) TESTING: configureCLanguage from PETSc.options.languages(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/languages.py:27) TESTING: resetEnvCompilers from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:2080) TESTING: checkEnvCompilers from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:2110) TESTING: checkMPICompilerOverride from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:2050) TESTING: requireMpiLdPath from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:2071) TESTING: checkInitialFlags from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:604) TESTING: checkCCompiler from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:787) TESTING: checkCPreprocessor from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:826) TESTING: checkCUDACompiler from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:862) TESTING: checkCUDAPreprocessor from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:902) TESTING: checkHIPCompiler from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:936) TESTING: checkHIPPreprocessor from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:979) TESTING: checkSYCLCompiler from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1010) TESTING: checkSYCLPreprocessor from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1036) TESTING: checkCxxCompiler from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1127) TESTING: checkCxxPreprocessor from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1168) TESTING: checkFortranCompiler from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1271) TESTING: checkFortranPreprocessor from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1308) TESTING: checkFortranComments from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1330) TESTING: checkLargeFileIO from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1507) TESTING: checkArchiver from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1606) TESTING: checkArchiverRecipeArgfile from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1670) TESTING: checkSharedLinker from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1752) TESTING: checkPIC from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1450) TESTING: checkSharedLinkerPaths from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1866) TESTING: checkLibC from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1884) TESTING: checkDynamicLinker from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1930) TESTING: checkPragma from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1409) TESTING: output from config.setCompilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/setCompilers.py:1979) TESTING: configureIndexSize from PETSc.options.indexTypes(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/indexTypes.py:39) TESTING: configureCompilerFlags from config.compilerFlags(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilerFlags.py:82) TESTING: checkIntelHardwareSupport from config.compilerFlags(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilerFlags.py:173) TESTING: checkCompilerMacros from config.compilerFlags(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilerFlags.py:164) TESTING: checkC99Flag from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:1684) TESTING: checkRestrict from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:160) TESTING: checkCFormatting from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:421) TESTING: checkCInline from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:130) TESTING: checkDynamicLoadFlag from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:432) TESTING: checkCLibraries from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:224) TESTING: checkDependencyGenerationFlag from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:1635) TESTING: checkRestrict from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:160) TESTING: checkCxxDialect from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:501) TESTING: checkCxxOptionalExtensions from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:451) TESTING: checkCxxInline from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:145) TESTING: checkCxxComplexFix from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:752) TESTING: checkCxxLibraries from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:781) TESTING: checkFortranNameMangling from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:1097) TESTING: checkFortranNameManglingDouble from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:1135) TESTING: checkFortranLibraries from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:1145) TESTING: checkFortranLinkingCxx from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:1600) TESTING: setupFrameworkCompilers from config.compilers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilers.py:1766) TESTING: configureClosure from config.utilities.closure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/closure.py:17) TESTING: checkFortranTypeSizes from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:56) TESTING: checkFortranPreprocessor from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:73) TESTING: checkFortranDefineCompilerOption from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:96) TESTING: checkFortran90 from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:146) TESTING: checkFortran90FreeForm from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:162) TESTING: checkFortran2003 from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:176) TESTING: checkFortran90Array from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:211) TESTING: checkFortran90AssumedType from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:298) TESTING: checkFortranModuleInclude from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:303) TESTING: checkFortranModuleOutput from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:369) TESTING: checkFortranTypeStar from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:135) TESTING: checkFortranTypeInitialize from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:125) TESTING: configureFortranFlush from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:116) TESTING: checkDependencyGenerationFlag from config.compilersFortran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/compilersFortran.py:414) TESTING: checkStdC from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:107) TESTING: checkStat from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:140) TESTING: checkSysWait from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:175) TESTING: checkTime from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:197) TESTING: checkMath from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:203) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:77) TESTING: checkRecursiveMacros from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:218) TESTING: configureCacheDetails from config.utilities.cacheDetails(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/cacheDetails.py:78) TESTING: check_struct_sigaction from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:42) TESTING: check__int64 from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:48) TESTING: checkSizeTypes from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:54) TESTING: checkFileTypes from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:64) TESTING: checkIntegerTypes from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:59) TESTING: checkPID from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:70) TESTING: checkUID from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:74) TESTING: checkC99Complex from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:81) TESTING: checkCxxComplex from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:95) TESTING: checkConst from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:106) TESTING: checkSizeof from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:162) TESTING: checkSizeof from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:162) TESTING: checkSizeof from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:162) TESTING: checkSizeof from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:162) TESTING: checkSizeof from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:162) TESTING: checkSizeof from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:162) TESTING: checkSizeof from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:162) TESTING: checkVisibility from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:196) TESTING: checkMaxPathLen from config.types(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/types.py:218) TESTING: configureMemAlign from PETSc.options.memAlign(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/memAlign.py:29) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkMath from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:286) TESTING: checkMathErf from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:305) TESTING: checkMathTgamma from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:314) TESTING: checkMathLgamma from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:323) TESTING: checkMathFenv from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:336) TESTING: checkMathLog2 from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:344) TESTING: checkRealtime from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:353) TESTING: checkDynamic from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:369) TESTING: configureLibraryOptions from PETSc.options.libraryOptions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/libraryOptions.py:38) TESTING: configureISColorValueType from PETSc.options.libraryOptions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/libraryOptions.py:99) TESTING: checkSysinfo from config.functions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/functions.py:106) TESTING: checkVPrintf from config.functions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/functions.py:125) TESTING: checkVFPrintf from config.functions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/functions.py:131) TESTING: checkVSNPrintf from config.functions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/functions.py:137) TESTING: checkNanosleep from config.functions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/functions.py:167) TESTING: checkMemmove from config.functions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/functions.py:173) TESTING: checkSignalHandlerType from config.functions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/functions.py:143) TESTING: checkFreeReturnType from config.functions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/functions.py:153) TESTING: checkVariableArgumentLists from config.functions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/functions.py:159) TESTING: checkClassify from config.functions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/functions.py:85) TESTING: checkMmap from config.functions(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/functions.py:179) TESTING: configureMemorySize from config.utilities.getResidentSetSize(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/getResidentSetSize.py:31) TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/fortranCommandLine.py:27) TESTING: configureFPTrap from config.utilities.FPTrap(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/FPTrap.py:27) TESTING: configureFeatureTestMacros from config.utilities.featureTestMacros(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/featureTestMacros.py:13) TESTING: configureMissingUtypeTypedefs from config.utilities.missing(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/missing.py:55) TESTING: configureMissingFunctions from config.utilities.missing(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/missing.py:61) TESTING: configureMissingSignals from config.utilities.missing(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/missing.py:79) TESTING: configureMissingGetdomainnamePrototype from config.utilities.missing(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/missing.py:96) TESTING: configureMissingSrandPrototype from config.utilities.missing(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/utilities/missing.py:121) TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/sharedLibraries.py:38) TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/sharedLibraries.py:53) TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/sharedLibraries.py:103) TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/sharedLibraries.py:109) TESTING: checkSymbolResolution from PETSc.options.sharedLibraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/sharedLibraries.py:118) TESTING: configureScalarType from PETSc.options.scalarTypes(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/scalarTypes.py:39) TESTING: configurePrecision from PETSc.options.scalarTypes(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/options/scalarTypes.py:80) TESTING: configureMkdir from config.programs(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/programs.py:22) TESTING: configureAutoreconf from config.programs(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/programs.py:44) TESTING: configurePrograms from config.programs(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/programs.py:71) TESTING: consistencyChecks from config.packages.make(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.make(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: configureMake from config.packages.make(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/make.py:96) TESTING: setupGNUMake from config.packages.make(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/make.py:150) TESTING: configureMakeNP from config.packages.make(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/make.py:197) TESTING: consistencyChecks from config.packages.hip(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.hip(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.X(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.X(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.X(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:930) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.X(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.X(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.hwloc(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.hwloc(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.thrust(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.thrust(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.cuda(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.cuda(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.OpenMPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.OpenMPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.MPICH(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.MPICH(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:758) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkMPIDistro from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:574) TESTING: configureMPI2 from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:352) TESTING: configureMPI3 from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:399) TESTING: configureMPIEXEC from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:185) TESTING: configureMPITypes from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:456) TESTING: SGIMPICheck from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:502) TESTING: CxxMPICheck from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:512) TESTING: FortranMPICheck from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:528) TESTING: configureIO from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:550) TESTING: findMPIIncludeAndLib from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:663) TESTING: PetscArchMPICheck from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MPI.py:733) TESTING: checkVersion from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.MPI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.zstd(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.zstd(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.yaml(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.yaml(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.yaml(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:930) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.yaml(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.yaml(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.sycl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.sycl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.ssl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/ssl.py:31) TESTING: alternateConfigureLibrary from config.packages.ssl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.sprng(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.sprng(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.revolve(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.revolve(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.radau5(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.radau5(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.pami(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.pami(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.opengles(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.opengles(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.opencl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.opencl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.opencl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:930) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.opencl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.opencl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.muparser(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.muparser(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.mpe(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.mpe(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.memkind(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.memkind(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.libmesh(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.libmesh(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/libmesh.py:69) TESTING: consistencyChecks from config.packages.moose(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.moose(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.libjpeg(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.libjpeg(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.gsl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.gsl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.gmp(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.gmp(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.mpfr(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.mpfr(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.giflib(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.giflib(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.cub(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.cub(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.ctetgen(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.ctetgen(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.concurrencykit(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.concurrencykit(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.cams(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.cams(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: locateC2html from config.packages.c2html(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/c2html.py:30) TESTING: consistencyChecks from config.packages.boost(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.boost(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.silo(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.silo(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.Random123(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.Random123(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.PARTY(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.PARTY(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.NVSHMEM(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.NVSHMEM(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.Matlab(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.Matlab(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.MatlabEngine(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.MatlabEngine(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.Mathematica(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.Mathematica(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.regex(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.regex(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.regex(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:930) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.regex(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.regex(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.libceed(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.libceed(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.petsc4py(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.petsc4py(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/petsc4py.py:129) TESTING: consistencyChecks from config.packages.mpi4py(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.mpi4py(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.opengl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.opengl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.glut(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.glut(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.GLVis(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.GLVis(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.CoDiPack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.CoDiPack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.adblaslapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.adblaslapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: locateCMake from config.packages.cmake(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/cmake.py:51) TESTING: consistencyChecks from config.packages.unittestcpp(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.unittestcpp(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.googletest(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.googletest(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.opencascade(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.opencascade(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.eigen(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.eigen(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.szlib(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.szlib(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.zlib(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.zlib(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.tetgen(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.tetgen(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.tchem(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.tchem(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.saws(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.saws(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.libpng(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.libpng(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.combblas(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.combblas(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.Triangle(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.Triangle(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.metis(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.metis(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.pragmatic(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.pragmatic(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.parmetis(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.parmetis(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.Chaco(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.Chaco(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.hdf5(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.hdf5(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.hdf5(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/hdf5.py:88) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.hdf5(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.hdf5(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.med(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.med(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.cgns(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.cgns(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.ascem-io(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.ascem-io(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.pflotran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.pflotran(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.alquimia(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.alquimia(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.SAMRAI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.SAMRAI(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.pnetcdf(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.pnetcdf(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.netcdf(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.netcdf(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.exodusii(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.exodusii(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.fblaslapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.fblaslapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.pthread(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.pthread(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.pthread(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/pthread.py:20) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.pthread(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.pthread(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.egads(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.egads(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.PTScotch(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.PTScotch(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.PTScotch(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:930) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.PTScotch(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) ============================================================================================= Warning: Using version 7.0.1 of package ptscotch PETSc is tested with 6.1 Suggest using --download-ptscotch for a compatible PTScotch ============================================================================================= TESTING: checkSharedLibrary from config.packages.PTScotch(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.mmg(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.mmg(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.parmmg(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.parmmg(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.Zoltan(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.Zoltan(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.Zoltan(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:930) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.Zoltan(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) ============================================================================================= Warning: Using version 3.90 of package zoltan PETSc is tested with 3.83 Suggest using --download-zoltan for a compatible Zoltan ============================================================================================= TESTING: checkSharedLibrary from config.packages.Zoltan(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.ADIOS(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.ADIOS(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.openmp(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.openmp(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.viennacl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.viennacl(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.ColPack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.ColPack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.ADOLC(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.ADOLC(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.openblas(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.openblas(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.blis(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.blis(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.f2cblaslapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/BlasLapack.py:485) TESTING: checkLib from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/BlasLapack.py:109) TESTING: checkMKL from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/BlasLapack.py:557) TESTING: checkESSL from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/BlasLapack.py:601) TESTING: checkPESSL from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/BlasLapack.py:621) TESTING: checkMissing from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/BlasLapack.py:646) TESTING: checklsame from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/BlasLapack.py:662) TESTING: checkRuntimeIssues from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/BlasLapack.py:721) TESTING: checkVersion from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.BlasLapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.sundials2(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.sundials2(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.spai(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/spai.py:53) TESTING: alternateConfigureLibrary from config.packages.spai(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.pARMS(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.pARMS(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.p4est(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.p4est(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.mkl_sparse_optimize(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.mkl_sparse_optimize(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.mkl_sparse_optimize(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/mkl_sparse_optimize.py:48) TESTING: checkVersion from config.packages.mkl_sparse_optimize(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.mkl_sparse_optimize(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.mkl_sparse(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.mkl_sparse(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.mkl_sparse(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/mkl_sparse.py:21) TESTING: checkVersion from config.packages.mkl_sparse(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.mkl_sparse(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.mkl_cpardiso(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/mkl_cpardiso.py:20) TESTING: alternateConfigureLibrary from config.packages.mkl_cpardiso(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.kokkos(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.kokkos(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.kokkos-kernels(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.kokkos-kernels(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.htool(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.htool(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.magma(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.magma(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.kblas(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.kblas(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.h2opus(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.h2opus(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.fftw(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.fftw(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.fftw(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:930) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.fftw(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.fftw(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.elemental(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.elemental(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.ml(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/ml.py:62) TESTING: checkDependencies from config.packages.ml(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.ml(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:930) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.ml(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.ml(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.mkl_pardiso(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/mkl_pardiso.py:21) TESTING: alternateConfigureLibrary from config.packages.mkl_pardiso(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.SuperLU_DIST(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.SuperLU_DIST(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.SuperLU_DIST(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/SuperLU_DIST.py:85) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.SuperLU_DIST(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) ============================================================================================= Warning: Using version 7.2.0 of package superlu_dist PETSc is tested with 7.1 Suggest using --download-superlu_dist for a compatible SuperLU_DIST ============================================================================================= TESTING: checkSharedLibrary from config.packages.SuperLU_DIST(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.SuperLU(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.SuperLU(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.SuperLU(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:930) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.SuperLU(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.SuperLU(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.PaStiX(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.PaStiX(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.scalapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: checkDependencies from config.packages.scalapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.scalapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:930) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.scalapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.scalapack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.strumpack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/strumpack.py:68) TESTING: alternateConfigureLibrary from config.packages.strumpack(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.MUMPS(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MUMPS.py:59) TESTING: checkDependencies from config.packages.MUMPS(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.MUMPS(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MUMPS.py:53) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.MUMPS(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.MUMPS(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.MOAB(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.MOAB(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.SuiteSparse(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/SuiteSparse.py:176) TESTING: checkDependencies from config.packages.SuiteSparse(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.SuiteSparse(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:930) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.SuiteSparse(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) ============================================================================================= Warning: Using version 5.11.0 of package suitesparse PETSc is tested with 5.10 Suggest using --download-suitesparse for a compatible SuiteSparse ============================================================================================= TESTING: checkSharedLibrary from config.packages.SuiteSparse(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.Chombo(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/Chombo.py:130) TESTING: alternateConfigureLibrary from config.packages.Chombo(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.hypre(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/hypre.py:171) TESTING: checkDependencies from config.packages.hypre(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:905) TESTING: configureLibrary from config.packages.hypre(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/hypre.py:179) TESTING: check from config.libraries(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/libraries.py:157) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/headers.py:86) TESTING: checkVersion from config.packages.hypre(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1071) TESTING: checkSharedLibrary from config.packages.hypre(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:996) TESTING: consistencyChecks from config.packages.Trilinos(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.Trilinos(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.xSDKTrilinos(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.xSDKTrilinos(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.mstk(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.mstk(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1000) TESTING: consistencyChecks from config.packages.slepc(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.slepc(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/slepc.py:97) TESTING: consistencyChecks from config.packages.hpddm(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.hpddm(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/hpddm.py:110) TESTING: consistencyChecks from config.packages.bamg(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.bamg(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/bamg.py:86) TESTING: consistencyChecks from config.packages.MFEM(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.MFEM(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/MFEM.py:218) TESTING: consistencyChecks from config.packages.AMReX(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/package.py:1004) TESTING: alternateConfigureLibrary from config.packages.AMReX(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/BuildSystem/config/packages/AMReX.py:151) TESTING: configureRTLDDefault from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:723) TESTING: configurePrefetch from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:541) TESTING: configureUnused from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:609) TESTING: configureDeprecated from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:627) TESTING: configureIsatty from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:621) TESTING: configureExpect from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:676) TESTING: configureAlign from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:660) TESTING: configureFunctionName from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:683) TESTING: configureIntptrt from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:701) TESTING: configureSolaris from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:728) TESTING: configureLinux from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:741) TESTING: configureWin32 from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:747) TESTING: configureCygwinBrokenPipe from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:825) TESTING: configureDefaultArch from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:841) TESTING: configureScript from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:858) TESTING: configureInstall from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:897) TESTING: configureGCOV from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:913) TESTING: configureAtoll from PETSc.Configure(/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/PETSc/Configure.py:604) Compilers: C Compiler: mpicc -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Version: gcc (Debian 11.2.0-19) 11.2.0 C++ Compiler: mpicxx -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -fPIC -std=gnu++11 Version: g++ (Debian 11.2.0-19) 11.2.0 Fortran Compiler: mpif90 -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 Version: GNU Fortran (Debian 11.2.0-19) 11.2.0 Linkers: Shared linker: mpicc -Wl,-z,relro -fPIC -shared -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC Dynamic linker: mpicc -Wl,-z,relro -fPIC -shared -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC Libraries linked against: -lquadmath -lstdc++ -ldl BlasLapack: Library: -llapack -lblas Unknown if this uses OpenMP (try export OMP_NUM_THREADS=<1-4> yourprogram -log_view) uses 4 byte integers MPI: Version: 3 mpiexec: mpiexec --oversubscribe Implementation: openmpi OMPI_VERSION: 4.1.3 X: Library: -lX11 pthread: hdf5: Version: 1.10.7 Includes: -I/usr/include/hdf5/openmpi Library: -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi hypre: Version: 2.23.0 Includes: -I/usr/include/hypre Library: -lHYPRE SuiteSparse: Version: 5.11.0 Includes: -I/usr/include/suitesparse Library: -lspqr -lumfpack -lamd -lcholmod -lklu PTScotch: Version: 7.0.1 Includes: -I/usr/include/scotch Library: -lptesmumps -lptscotch -lptscotcherr regex: Zoltan: Version: 3.90 Includes: -I/usr/include/trilinos Library: -ltrilinos_zoltan MUMPS: Version: 5.4.1 Library: -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord scalapack: Library: -lscalapack-openmpi SuperLU: Version: 5.3.0 Includes: -I/usr/include/superlu Library: -lsuperlu SuperLU_DIST: Version: 7.2.0 Includes: -I/usr/include/superlu-dist Library: -lsuperlu_dist ml: Includes: -I/usr/include/trilinos Library: -ltrilinos_ml fftw: Library: -lfftw3 -lfftw3_mpi opencl: Library: -lOpenCL yaml: Library: -lyaml Language used to compile PETSc: C PETSc: PETSC_ARCH: x86_64-linux-gnu-real-debug PETSC_DIR: /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 Prefix: /usr/lib/petscdir/petsc3.16/x86_64-linux-gnu-real-debug Scalar type: real Precision: double Support for __float128 Integer size: 4 bytes Single library: yes Shared libraries: yes shared library extension: _real Memory alignment from malloc(): 16 bytes Using GNU make: /usr/bin/gmake xxx=========================================================================xxx Configure stage complete. Now build PETSc libraries with: make PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real-debug all xxx=========================================================================xxx ===================== libpetsc-real3.16-dev ===================== set -e; \ if dh_auto_configure -plibpetsc-real3.16-dev -- \ --with-debugging=0 \ --shared-library-extension=_real \ --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include=[] --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS="-Wl,--no-as-needed" \ --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib="-lHYPRE" \ --with-mumps=1 --with-mumps-include=[] --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" \ --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" \ --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu \ --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist \ --with-ml=1 --with-ml-include=/usr/include/trilinos --with-ml-lib=-ltrilinos_ml \ --with-zoltan=1 --with-zoltan-include=/usr/include/trilinos --with-zoltan-lib=-ltrilinos_zoltan \ --prefix=/usr/lib/petscdir/petsc3.16/x86_64-linux-gnu-real \ --PETSC_ARCH=x86_64-linux-gnu-real \ CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" \ CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS="w"; then \ : ; \ else \ cat configure.log; \ false; \ fi dh_auto_configure: warning: All requested packages have been excluded (e.g. via a Build-Profile or due to architecture restrictions). ===================== libpetsc-complex3.16-dev ===================== set -e; \ if dh_auto_configure -plibpetsc-complex3.16-dev -- \ --with-debugging=0 \ --with-scalar-type=complex --shared-library-extension=_complex \ --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include=[] --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS="-Wl,--no-as-needed" \ --with-mumps=1 --with-mumps-include=[] --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" \ --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" \ --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu \ --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist \ --with-zoltan=1 --with-zoltan-include=/usr/include/trilinos --with-zoltan-lib=-ltrilinos_zoltan \ --prefix=/usr/lib/petscdir/petsc3.16/x86_64-linux-gnu-complex \ --PETSC_ARCH=x86_64-linux-gnu-complex \ CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" \ CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS="w"; then \ : ; \ else \ cat configure.log; \ false; \ fi dh_auto_configure: warning: All requested packages have been excluded (e.g. via a Build-Profile or due to architecture restrictions). ===================== libpetsc-complex3.16-dbg ===================== set -e; \ if dh_auto_configure -plibpetsc-complex3.16-dbg -- \ --with-debugging=1 \ --with-scalar-type=complex --shared-library-extension=_complex \ --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include=[] --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS="-Wl,--no-as-needed" \ --with-mumps=1 --with-mumps-include=[] --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" \ --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" \ --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu \ --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist \ --with-zoltan=1 --with-zoltan-include=/usr/include/trilinos --with-zoltan-lib=-ltrilinos_zoltan \ --prefix=/usr/lib/petscdir/petsc3.16/x86_64-linux-gnu-complex-debug \ --PETSC_ARCH=x86_64-linux-gnu-complex-debug \ CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" \ CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS="w"; then \ : ; \ else \ cat configure.log; \ false; \ fi dh_auto_configure: warning: All requested packages have been excluded (e.g. via a Build-Profile or due to architecture restrictions). ===================== libpetsc64-real3.16-dbg ===================== set -e; \ if dh_auto_configure -plibpetsc64-real3.16-dbg -- \ --with-64-bit-indices \ --with-debugging=1 \ --shared-library-extension=64_real \ --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include=[] --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS="-Wl,--no-as-needed" \ --with-hypre=1 --with-hypre-include=/usr/include/hypre64m --with-hypre-lib="-lHYPRE64m" \ --with-mumps=1 --with-mumps-include=[] --with-mumps-lib="-ldmumps_64 -lzmumps_64 -lsmumps_64 -lcmumps_64 -lmumps_common_64 -lpord_64" \ --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" \ --with-zoltan=1 --with-zoltan-include=/usr/include/trilinos --with-zoltan-lib=-ltrilinos_zoltan \ --prefix=/usr/lib/petscdir/petsc64-3.16/x86_64-linux-gnu-real-debug \ --PETSC_ARCH=x86_64-linux-gnu-real-debug-64 \ CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" \ CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS="w"; then \ : ; \ else \ cat configure.log; \ false; \ fi dh_auto_configure: warning: All requested packages have been excluded (e.g. via a Build-Profile or due to architecture restrictions). ===================== libpetsc64-real3.16-dev ===================== set -e; \ if dh_auto_configure -plibpetsc64-real3.16-dev -- \ --with-64-bit-indices \ --with-debugging=0 \ --shared-library-extension=64_real \ --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include=[] --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS="-Wl,--no-as-needed" \ --with-hypre=1 --with-hypre-include=/usr/include/hypre64m --with-hypre-lib="-lHYPRE64m" \ --with-mumps=1 --with-mumps-include=[] --with-mumps-lib="-ldmumps_64 -lzmumps_64 -lsmumps_64 -lcmumps_64 -lmumps_common_64 -lpord_64" \ --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" \ --with-zoltan=1 --with-zoltan-include=/usr/include/trilinos --with-zoltan-lib=-ltrilinos_zoltan \ --prefix=/usr/lib/petscdir/petsc64-3.16/x86_64-linux-gnu-real \ --PETSC_ARCH=x86_64-linux-gnu-real-64 \ CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" \ CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS="w"; then \ : ; \ else \ cat configure.log; \ false; \ fi dh_auto_configure: warning: All requested packages have been excluded (e.g. via a Build-Profile or due to architecture restrictions). ===================== libpetsc64-complex3.16-dev ===================== set -e; \ if dh_auto_configure -plibpetsc64-complex3.16-dev -- \ --with-64-bit-indices \ --with-debugging=0 \ --with-scalar-type=complex --shared-library-extension=64_complex \ --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include=[] --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS="-Wl,--no-as-needed" \ --with-mumps=1 --with-mumps-include=[] --with-mumps-lib="-ldmumps_64 -lzmumps_64 -lsmumps_64 -lcmumps_64 -lmumps_common_64 -lpord_64" \ --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" \ --with-zoltan=1 --with-zoltan-include=/usr/include/trilinos --with-zoltan-lib=-ltrilinos_zoltan \ --prefix=/usr/lib/petscdir/petsc64-3.16/x86_64-linux-gnu-complex \ --PETSC_ARCH=x86_64-linux-gnu-complex-64 \ CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" \ CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS="w"; then \ : ; \ else \ cat configure.log; \ false; \ fi dh_auto_configure: warning: All requested packages have been excluded (e.g. via a Build-Profile or due to architecture restrictions). ===================== libpetsc64-complex3.16-dbg ===================== set -e; \ if dh_auto_configure -plibpetsc64-complex3.16-dbg -- \ --with-64-bit-indices \ --with-debugging=1 \ --with-scalar-type=complex --shared-library-extension=64_complex \ --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include=[] --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS="-Wl,--no-as-needed" \ --with-mumps=1 --with-mumps-include=[] --with-mumps-lib="-ldmumps_64 -lzmumps_64 -lsmumps_64 -lcmumps_64 -lmumps_common_64 -lpord_64" \ --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" \ --with-zoltan=1 --with-zoltan-include=/usr/include/trilinos --with-zoltan-lib=-ltrilinos_zoltan \ --prefix=/usr/lib/petscdir/petsc64-3.16/x86_64-linux-gnu-complex-debug \ --PETSC_ARCH=x86_64-linux-gnu-complex-debug-64 \ CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" \ CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS="w"; then \ : ; \ else \ cat configure.log; \ false; \ fi dh_auto_configure: warning: All requested packages have been excluded (e.g. via a Build-Profile or due to architecture restrictions). make[1]: Leaving directory '/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1' debian/rules override_dh_auto_build make[1]: Entering directory '/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1' dh_auto_build -plibpetsc-real3.16-dbg -ppetsc3.16-doc -plibpetsc3.16-dev-examples -- V=1 \ PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real-debug \ CFLAGS="" CXXFLAGS="" \ FCFLAGS="" FFLAGS="" make -j10 V=1 PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6\+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real-debug CFLAGS= CXXFLAGS= FCFLAGS= FFLAGS= make[2]: Entering directory '/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1' sed: -e expression #1, char 42: unknown option to `s' /bin/bash: line 4: [: too many arguments /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/lib/petsc/bin/petscnagupgrade.py:14: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives from distutils.version import LooseVersion as Version ========================================== See documentation/faq.html and documentation/bugreporting.html for help with installation problems. Please send EVERYTHING printed out below when reporting problems. Please check the mailing list archives and consider subscribing. https://petsc.org/release/community/mailing/ ========================================== Starting make run on c9b78e24385b at Mon, 18 Apr 2022 22:27:58 +0000 Machine characteristics: Linux c9b78e24385b 5.10.96-1.fc32.qubes.x86_64 #1 SMP Sat Feb 5 23:22:31 CET 2022 x86_64 GNU/Linux ----------------------------------------- Using PETSc directory: /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 Using PETSc arch: x86_64-linux-gnu-real-debug ----------------------------------------- PETSC_VERSION_RELEASE 1 PETSC_VERSION_MAJOR 3 PETSC_VERSION_MINOR 16 PETSC_VERSION_SUBMINOR 6 PETSC_VERSION_PATCH 0 PETSC_VERSION_DATE "Mar 30, 2022" PETSC_VERSION_GIT "v3.16.6" PETSC_VERSION_DATE_GIT "2022-03-30 19:13:58 -0500" PETSC_VERSION_EQ(MAJOR,MINOR,SUBMINOR) \ PETSC_VERSION_ PETSC_VERSION_EQ PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ ----------------------------------------- Using configure Options: --build=x86_64-linux-gnu --prefix=/usr --includedir=/include --mandir=/share/man --infodir=/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=/lib/x86_64-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=1 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi" --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --with-ml=1 --with-ml-include=/usr/include/trilinos --with-ml-lib=-ltrilinos_ml --with-zoltan=1 --with-zoltan-include=/usr/include/trilinos --with-zoltan-lib=-ltrilinos_zoltan --prefix=/usr/lib/petscdir/petsc3.16/x86_64-linux-gnu-real-debug --PETSC_ARCH=x86_64-linux-gnu-real-debug CFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w Using configuration flags: #define INCLUDED_PETSCCONF_H #define PETSC_ARCH "" #define PETSC_ATTRIBUTEALIGNED(size) __attribute((aligned(size))) #define PETSC_Alignx(a,b) #define PETSC_BLASLAPACK_UNDERSCORE 1 #define PETSC_CLANGUAGE_C 1 #define PETSC_CXX_INLINE inline #define PETSC_CXX_RESTRICT __restrict #define PETSC_C_INLINE inline #define PETSC_C_RESTRICT __restrict #define PETSC_DEPRECATED_ENUM(why) __attribute((deprecated)) #define PETSC_DEPRECATED_FUNCTION(why) __attribute((deprecated)) #define PETSC_DEPRECATED_MACRO(why) _Pragma(why) #define PETSC_DEPRECATED_TYPEDEF(why) __attribute((deprecated)) #define PETSC_DIR "/usr/lib/petscdir/petsc3.16/x86_64-linux-gnu-real-debug" #define PETSC_DIR_SEPARATOR '/' #define PETSC_FORTRAN_CHARLEN_T size_t #define PETSC_FORTRAN_TYPE_INITIALIZE = -2 #define PETSC_FUNCTION_NAME_C __func__ #define PETSC_FUNCTION_NAME_CXX __func__ #define PETSC_HAVE_ACCESS 1 #define PETSC_HAVE_ATOLL 1 #define PETSC_HAVE_ATTRIBUTEALIGNED 1 #define PETSC_HAVE_BUILTIN_EXPECT 1 #define PETSC_HAVE_BZERO 1 #define PETSC_HAVE_C99_COMPLEX 1 #define PETSC_HAVE_CLOCK 1 #define PETSC_HAVE_CXX 1 #define PETSC_HAVE_CXX_COMPLEX 1 #define PETSC_HAVE_CXX_COMPLEX_FIX 1 #define PETSC_HAVE_CXX_DIALECT_CXX03 1 #define PETSC_HAVE_CXX_DIALECT_CXX11 1 #define PETSC_HAVE_DLADDR 1 #define PETSC_HAVE_DLCLOSE 1 #define PETSC_HAVE_DLERROR 1 #define PETSC_HAVE_DLFCN_H 1 #define PETSC_HAVE_DLOPEN 1 #define PETSC_HAVE_DLSYM 1 #define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1 #define PETSC_HAVE_DRAND48 1 #define PETSC_HAVE_DYNAMIC_LIBRARIES 1 #define PETSC_HAVE_ERF 1 #define PETSC_HAVE_F90_2PTR_ARG 1 #define PETSC_HAVE_FCNTL_H 1 #define PETSC_HAVE_FENV_H 1 #define PETSC_HAVE_FFTW 1 #define PETSC_HAVE_FLOAT_H 1 #define PETSC_HAVE_FORK 1 #define PETSC_HAVE_FORTRAN 1 #define PETSC_HAVE_FORTRAN_FLUSH 1 #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #define PETSC_HAVE_FORTRAN_TYPE_STAR 1 #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #define PETSC_HAVE_GETCWD 1 #define PETSC_HAVE_GETDOMAINNAME 1 #define PETSC_HAVE_GETHOSTBYNAME 1 #define PETSC_HAVE_GETHOSTNAME 1 #define PETSC_HAVE_GETPAGESIZE 1 #define PETSC_HAVE_GETRUSAGE 1 #define PETSC_HAVE_HDF5 1 #define PETSC_HAVE_HYPRE 1 #define PETSC_HAVE_IMMINTRIN_H 1 #define PETSC_HAVE_INTTYPES_H 1 #define PETSC_HAVE_ISINF 1 #define PETSC_HAVE_ISNAN 1 #define PETSC_HAVE_ISNORMAL 1 #define PETSC_HAVE_LGAMMA 1 #define PETSC_HAVE_LOG2 1 #define PETSC_HAVE_LSEEK 1 #define PETSC_HAVE_MALLOC_H 1 #define PETSC_HAVE_MEMALIGN 1 #define PETSC_HAVE_MEMMOVE 1 #define PETSC_HAVE_ML 1 #define PETSC_HAVE_MMAP 1 #define PETSC_HAVE_MPIEXEC_ENVIRONMENTAL_VARIABLE OMP #define PETSC_HAVE_MPIIO 1 #define PETSC_HAVE_MPI_COMBINER_CONTIGUOUS 1 #define PETSC_HAVE_MPI_COMBINER_DUP 1 #define PETSC_HAVE_MPI_COMBINER_NAMED 1 #define PETSC_HAVE_MPI_EXSCAN 1 #define PETSC_HAVE_MPI_F90MODULE 1 #define PETSC_HAVE_MPI_F90MODULE_VISIBILITY 1 #define PETSC_HAVE_MPI_FEATURE_DYNAMIC_WINDOW 1 #define PETSC_HAVE_MPI_FINALIZED 1 #define PETSC_HAVE_MPI_GET_ACCUMULATE 1 #define PETSC_HAVE_MPI_GET_LIBRARY_VERSION 1 #define PETSC_HAVE_MPI_IALLREDUCE 1 #define PETSC_HAVE_MPI_IBARRIER 1 #define PETSC_HAVE_MPI_INIT_THREAD 1 #define PETSC_HAVE_MPI_INT64_T 1 #define PETSC_HAVE_MPI_IN_PLACE 1 #define PETSC_HAVE_MPI_LONG_DOUBLE 1 #define PETSC_HAVE_MPI_NEIGHBORHOOD_COLLECTIVES 1 #define PETSC_HAVE_MPI_NONBLOCKING_COLLECTIVES 1 #define PETSC_HAVE_MPI_ONE_SIDED 1 #define PETSC_HAVE_MPI_PROCESS_SHARED_MEMORY 1 #define PETSC_HAVE_MPI_REDUCE_LOCAL 1 #define PETSC_HAVE_MPI_REDUCE_SCATTER 1 #define PETSC_HAVE_MPI_REDUCE_SCATTER_BLOCK 1 #define PETSC_HAVE_MPI_RGET 1 #define PETSC_HAVE_MPI_TYPE_DUP 1 #define PETSC_HAVE_MPI_TYPE_GET_ENVELOPE 1 #define PETSC_HAVE_MPI_WIN_CREATE 1 #define PETSC_HAVE_MUMPS 1 #define PETSC_HAVE_NANOSLEEP 1 #define PETSC_HAVE_NETDB_H 1 #define PETSC_HAVE_NETINET_IN_H 1 #define PETSC_HAVE_OMPI_MAJOR_VERSION 4 #define PETSC_HAVE_OMPI_MINOR_VERSION 1 #define PETSC_HAVE_OMPI_RELEASE_VERSION 3 #define PETSC_HAVE_OPENCL 1 #define PETSC_HAVE_PACKAGES ":blaslapack:fftw3:hdf5:hypre:mathlib:ml:mpi:mumps:opencl:pthread:ptscotch:regex:scalapack:suitesparse:superlu:superlu_dist:x11:yaml:zoltan:" #define PETSC_HAVE_POPEN 1 #define PETSC_HAVE_PTHREAD 1 #define PETSC_HAVE_PTHREAD_BARRIER_T 1 #define PETSC_HAVE_PTHREAD_H 1 #define PETSC_HAVE_PTSCOTCH 1 #define PETSC_HAVE_PWD_H 1 #define PETSC_HAVE_RAND 1 #define PETSC_HAVE_READLINK 1 #define PETSC_HAVE_REALPATH 1 #define PETSC_HAVE_REAL___FLOAT128 1 #define PETSC_HAVE_REGEX 1 #define PETSC_HAVE_RTLD_GLOBAL 1 #define PETSC_HAVE_RTLD_LAZY 1 #define PETSC_HAVE_RTLD_LOCAL 1 #define PETSC_HAVE_RTLD_NOW 1 #define PETSC_HAVE_SCALAPACK 1 #define PETSC_HAVE_SCHED_CPU_SET_T 1 #define PETSC_HAVE_SETJMP_H 1 #define PETSC_HAVE_SLEEP 1 #define PETSC_HAVE_SNPRINTF 1 #define PETSC_HAVE_SOCKET 1 #define PETSC_HAVE_SO_REUSEADDR 1 #define PETSC_HAVE_STDINT_H 1 #define PETSC_HAVE_STRCASECMP 1 #define PETSC_HAVE_STRINGS_H 1 #define PETSC_HAVE_STRUCT_SIGACTION 1 #define PETSC_HAVE_SUITESPARSE 1 #define PETSC_HAVE_SUPERLU 1 #define PETSC_HAVE_SUPERLU_DIST 1 #define PETSC_HAVE_SYSINFO 1 #define PETSC_HAVE_SYS_PARAM_H 1 #define PETSC_HAVE_SYS_PROCFS_H 1 #define PETSC_HAVE_SYS_RESOURCE_H 1 #define PETSC_HAVE_SYS_SOCKET_H 1 #define PETSC_HAVE_SYS_SYSINFO_H 1 #define PETSC_HAVE_SYS_TIMES_H 1 #define PETSC_HAVE_SYS_TIME_H 1 #define PETSC_HAVE_SYS_TYPES_H 1 #define PETSC_HAVE_SYS_UTSNAME_H 1 #define PETSC_HAVE_SYS_WAIT_H 1 #define PETSC_HAVE_TGAMMA 1 #define PETSC_HAVE_TIME 1 #define PETSC_HAVE_TIME_H 1 #define PETSC_HAVE_UNAME 1 #define PETSC_HAVE_UNISTD_H 1 #define PETSC_HAVE_USLEEP 1 #define PETSC_HAVE_VA_COPY 1 #define PETSC_HAVE_VSNPRINTF 1 #define PETSC_HAVE_X 1 #define PETSC_HAVE_XMMINTRIN_H 1 #define PETSC_HAVE_YAML 1 #define PETSC_HAVE_ZOLTAN 1 #define PETSC_HDF5_HAVE_PARALLEL 1 #define PETSC_HDF5_HAVE_SZLIB 1 #define PETSC_HDF5_HAVE_ZLIB 1 #define PETSC_IS_COLORING_MAX USHRT_MAX #define PETSC_IS_COLORING_VALUE_TYPE short #define PETSC_IS_COLORING_VALUE_TYPE_F integer2 #define PETSC_LEVEL1_DCACHE_LINESIZE 64 #define PETSC_LIB_DIR "/usr/lib/petscdir/petsc3.16/x86_64-linux-gnu-real-debug/lib" #define PETSC_MAX_PATH_LEN 4096 #define PETSC_MEMALIGN 16 #define PETSC_MPICC_SHOW "gcc -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -pthread -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi" #define PETSC_MPIU_IS_COLORING_VALUE_TYPE MPI_UNSIGNED_SHORT #define PETSC_PREFETCH_HINT_NTA _MM_HINT_NTA #define PETSC_PREFETCH_HINT_T0 _MM_HINT_T0 #define PETSC_PREFETCH_HINT_T1 _MM_HINT_T1 #define PETSC_PREFETCH_HINT_T2 _MM_HINT_T2 #define PETSC_PYTHON_EXE "/usr/bin/python3" #define PETSC_Prefetch(a,b,c) _mm_prefetch((const char*)(a),(c)) #define PETSC_REPLACE_DIR_SEPARATOR '\\' #define PETSC_SIGNAL_CAST #define PETSC_SIZEOF_ENUM 4 #define PETSC_SIZEOF_INT 4 #define PETSC_SIZEOF_LONG 8 #define PETSC_SIZEOF_LONG_LONG 8 #define PETSC_SIZEOF_SHORT 2 #define PETSC_SIZEOF_SIZE_T 8 #define PETSC_SIZEOF_VOID_P 8 #define PETSC_SLSUFFIX "so" #define PETSC_UINTPTR_T uintptr_t #define PETSC_UNUSED __attribute((unused)) #define PETSC_USE_AVX512_KERNELS 1 #define PETSC_USE_BACKWARD_LOOP 1 #define PETSC_USE_CTABLE 1 #define PETSC_USE_DEBUG 1 #define PETSC_USE_DEBUGGER "gdb" #define PETSC_USE_INFO 1 #define PETSC_USE_ISATTY 1 #define PETSC_USE_LOG 1 #define PETSC_USE_PROC_FOR_SIZE 1 #define PETSC_USE_REAL_DOUBLE 1 #define PETSC_USE_SHARED_LIBRARIES 1 #define PETSC_USE_SINGLE_LIBRARY 1 #define PETSC_USE_SOCKET_VIEWER 1 #define PETSC_USE_VISIBILITY_C 1 #define PETSC_USE_VISIBILITY_CXX 1 #define PETSC_USING_64BIT_PTR 1 #define PETSC_USING_F2003 1 #define PETSC_USING_F90FREEFORM 1 #define PETSC__BSD_SOURCE 1 #define PETSC__DEFAULT_SOURCE 1 #define PETSC__GNU_SOURCE 1 ----------------------------------------- Using C compile: mpicc -o .o -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 C compiler version: gcc (Debian 11.2.0-19) 11.2.0 Using C++ compile: mpicxx -o .o -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -fPIC -std=gnu++11 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi C++ compiler version: g++ (Debian 11.2.0-19) 11.2.0 Using Fortran compile: mpif90 -o .o -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi Fortran compiler version: GNU Fortran (Debian 11.2.0-19) 11.2.0 ----------------------------------------- Using C/C++ linker: mpicc Using C/C++ flags: -Wl,-z,relro -fPIC -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC Using Fortran linker: mpif90 Using Fortran flags: -Wl,-z,relro -fPIC -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 ----------------------------------------- Using system modules: Using mpi.h: # 1 "/usr/lib/x86_64-linux-gnu/openmpi/include/mpi.h" 1 ----------------------------------------- Using libraries: -L/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/lib -L/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/lib -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/x86_64-linux-gnu/openmpi/lib/fortran/gfortran -L/usr/lib/gcc/x86_64-linux-gnu/11 -lpetsc_real -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu -lsuperlu_dist -ltrilinos_ml -lfftw3 -lfftw3_mpi -llapack -lblas -ltrilinos_zoltan -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi -lm -lOpenCL -lyaml -lX11 -lstdc++ -ldl -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lutil -lgfortran -lm -lrt -lz -lgfortran -lm -lgfortran -lgcc_s -lquadmath -lpthread -lquadmath -lstdc++ -ldl ------------------------------------------ Using mpiexec: mpiexec --oversubscribe ------------------------------------------ Using MAKE: /usr/bin/gmake Using MAKEFLAGS: -j8 -l15.0 -j10 --jobserver-auth=4,5 --no-print-directory -- FFLAGS= FCFLAGS= CXXFLAGS= CFLAGS= PETSC_ARCH=x86_64-linux-gnu-real-debug PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 V=1 ========================================== /usr/bin/python3 ./config/gmakegen.py --petsc-arch=x86_64-linux-gnu-real-debug /usr/bin/python3 /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/config/gmakegentest.py --petsc-dir=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 --petsc-arch=x86_64-linux-gnu-real-debug --testdir=./x86_64-linux-gnu-real-debug/tests mpicc -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi -Wdate-time -D_FORTIFY_SOURCE=2 -MMD -MP /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/src/sys/dll/dl.c -o x86_64-linux-gnu-real-debug/obj/sys/dll/dl.o -------------------------------------------------------------------------- Unable to call the compiler (/usr/bin/gcc). The failure return the error Unknown error 1216367328. The failed command was [/usr/bin/gcc -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi -Wdate-time -D_FORTIFY_SOURCE=2 -MMD -MP /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/src/sys/dll/dl.c -o x86_64-linux-gnu-real-debug/obj/sys/dll/dl.o -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -pthread]. -------------------------------------------------------------------------- gmake[5]: *** [gmakefile:185: x86_64-linux-gnu-real-debug/obj/sys/dll/dl.o] Error 96 gmake[5]: *** Waiting for unfinished jobs.... mpif90 -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi -MMD -MP /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/src/sys/fsrc/somefort.F90 -o x86_64-linux-gnu-real-debug/obj/sys/fsrc/somefort.o -J/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include mpicc -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi -Wdate-time -D_FORTIFY_SOURCE=2 -MMD -MP /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/src/sys/dll/dlimpl.c -o x86_64-linux-gnu-real-debug/obj/sys/dll/dlimpl.o mpicxx -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -fPIC -std=gnu++11 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi -MMD -MP /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/src/sys/dll/cxx/demangle.cxx -o x86_64-linux-gnu-real-debug/obj/sys/dll/cxx/demangle.o mpif90 -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi -MMD -MP /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/src/sys/f90-src/fsrc/f90_fwrap.F90 -o x86_64-linux-gnu-real-debug/obj/sys/f90-src/fsrc/f90_fwrap.o -J/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include mpicxx -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -fPIC -std=gnu++11 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi -MMD -MP /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/src/sys/objects/device/interface/device.cxx -o x86_64-linux-gnu-real-debug/obj/sys/objects/device/interface/device.o mpif90 -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi -MMD -MP /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/src/sys/f90-mod/petscsysmod.F90 -o x86_64-linux-gnu-real-debug/obj/sys/f90-mod/petscsysmod.o -J/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include mpicxx -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -fPIC -std=gnu++11 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi -MMD -MP /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/src/sys/objects/device/interface/cupminterface.cxx -o x86_64-linux-gnu-real-debug/obj/sys/objects/device/interface/cupminterface.o mpicxx -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -fPIC -std=gnu++11 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi -MMD -MP /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/src/sys/objects/device/interface/dcontext.cxx -o x86_64-linux-gnu-real-debug/obj/sys/objects/device/interface/dcontext.o mpicxx -c -g -O2 -ffile-prefix-map=/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -fPIC -std=gnu++11 -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/include -I/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/x86_64-linux-gnu-real-debug/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/trilinos -I/usr/include/scotch -I/usr/include/hdf5/openmpi -MMD -MP /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/src/sys/objects/device/interface/devicereg.cxx -o x86_64-linux-gnu-real-debug/obj/sys/objects/device/interface/devicereg.o gmake[4]: *** [/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1/lib/petsc/conf/rules:50: libs] Error 2 **************************ERROR************************************* Error during compile, check x86_64-linux-gnu-real-debug/lib/petsc/conf/make.log Send it and x86_64-linux-gnu-real-debug/lib/petsc/conf/configure.log to petsc-maint@mcs.anl.gov ******************************************************************** gmake[3]: *** [makefile:40: all] Error 1 make[2]: *** [GNUmakefile:9: all] Error 2 make[2]: Leaving directory '/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1' dh_auto_build: error: make -j10 V=1 PETSC_DIR=/build/petsc-Zv7BZL/petsc-3.16.6\+dfsg1 PETSC_ARCH=x86_64-linux-gnu-real-debug CFLAGS= CXXFLAGS= FCFLAGS= FFLAGS= returned exit code 2 make[1]: *** [debian/rules:444: override_dh_auto_build] Error 25 make[1]: Leaving directory '/build/petsc-Zv7BZL/petsc-3.16.6+dfsg1' make: *** [debian/rules:223: build-indep] Error 2 dpkg-buildpackage: error: debian/rules build-indep subprocess returned exit status 2 E: run_chroot failed: E: command failed: chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/petsc-Zv7BZL/petsc-3.16.6+dfsg1 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1649451661" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all" W: listening on child socket failed: I: removing tempdir /tmp/mmdebstrap.2a9SBQHyzT... E: mmdebstrap failed to run mmdebstrap failed