Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/o/opentsne/opentsne_0.6.1-2_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/opentsne-0.6.1-2e6ex72oq/opentsne_0.6.1-2_amd64.buildinfo Get source package info: opentsne=0.6.1-2 Source URL: http://snapshot.notset.fr/mr/package/opentsne/0.6.1-2/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.1 autopoint=0.21-4 autotools-dev=20180224.1+nmu1 base-files=12 base-passwd=3.5.52 bash=5.1-5+b1 binutils=2.37-10 binutils-common=2.37-10 binutils-x86-64-linux-gnu=2.37-10 bsdextrautils=2.37.2-4 bsdutils=1:2.37.2-4 build-essential=12.9 bzip2=1.0.8-5 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.2.0-13 cython3=0.29.24-1+b1 dash=0.5.11+git20210903+057cd650a4ed-3 debconf=1.5.79 debhelper=13.6 debianutils=5.5-1 dh-autoreconf=20 dh-python=5.20211217 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.1 dpkg-dev=1.21.1 dwz=0.14-1 file=1:5.41-2 findutils=4.8.0-1 g++=4:11.2.0-2 g++-11=11.2.0-13 gcc=4:11.2.0-2 gcc-11=11.2.0-13 gcc-11-base=11.2.0-13 gettext=0.21-4 gettext-base=0.21-4 grep=3.7-1 groff-base=1.22.4-7 gzip=1.10-4 hostname=3.23 init-system-helpers=1.61 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libarchive-zip-perl=1.68-1 libasan6=11.2.0-13 libatomic1=11.2.0-13 libattr1=1:2.5.1-1 libaudit-common=1:3.0.6-1 libaudit1=1:3.0.6-1+b1 libbinutils=2.37-10 libblas3=3.10.0-2 libblkid1=2.37.2-4 libbsd0=0.11.3-1 libbz2-1.0=1.0.8-5 libc-bin=2.33-1 libc-dev-bin=2.33-1 libc6=2.33-1 libc6-dev=2.33-1 libcap-ng0=0.7.9-2.2+b1 libcap2=1:2.44-1 libcc1-0=11.2.0-13 libcom-err2=1.46.4-1 libcrypt-dev=1:4.4.27-1 libcrypt1=1:4.4.27-1 libctf-nobfd0=2.37-10 libctf0=2.37-10 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.261 libdebhelper-perl=13.6 libdpkg-perl=1.21.1 libedit2=3.1-20210910-1 libelf1=0.186-1 libexpat1=2.4.1-3 libexpat1-dev=2.4.1-3 libffi8=3.4.2-3 libfftw3-bin=3.3.8-2 libfftw3-dev=3.3.8-2 libfftw3-double3=3.3.8-2 libfftw3-long3=3.3.8-2 libfftw3-quad3=3.3.8-2 libfftw3-single3=3.3.8-2 libfile-stripnondeterminism-perl=1.13.0-1 libgcc-11-dev=11.2.0-13 libgcc-s1=11.2.0-13 libgcrypt20=1.9.4-5 libgdbm-compat4=1.22-1 libgdbm6=1.22-1 libgfortran5=11.2.0-13 libgmp10=2:6.2.1+dfsg-3 libgomp1=11.2.0-13 libgpg-error0=1.43-1 libgssapi-krb5-2=1.18.3-7 libicu67=67.1-7 libisl23=0.24-2 libitm1=11.2.0-13 libjs-jquery=3.5.1+dfsg+~3.5.5-8 libjs-sphinxdoc=4.3.2-1 libjs-underscore=1.9.1~dfsg-4 libk5crypto3=1.18.3-7 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-7 libkrb5support0=1.18.3-7 liblapack3=3.10.0-2 liblbfgsb0=3.0+dfsg.3-10 liblsan0=11.2.0-13 liblz4-1=1.9.3-2 liblzma5=5.2.5-2 libmagic-mgc=1:5.41-2 libmagic1=1:5.41-2 libmd0=1.0.4-1 libmount1=2.37.2-4 libmpc3=1.2.1-1 libmpdec3=2.5.1-2 libmpfr6=4.1.0-3 libncurses6=6.3-1 libncursesw6=6.3-1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libpam-modules=1.4.0-11 libpam-modules-bin=1.4.0-11 libpam-runtime=1.4.0-11 libpam0g=1.4.0-11 libpcre2-8-0=10.39-3 libpcre3=2:8.39-13 libperl5.32=5.32.1-6 libpipeline1=1.5.4-1 libprocps8=2:3.3.17-5 libpython3-all-dev=3.9.8-1 libpython3-dev=3.9.8-1 libpython3-stdlib=3.9.8-1 libpython3.10=3.10.1-2 libpython3.10-dev=3.10.1-2 libpython3.10-minimal=3.10.1-2 libpython3.10-stdlib=3.10.1-2 libpython3.9=3.9.9-2 libpython3.9-dev=3.9.9-2 libpython3.9-minimal=3.9.9-2 libpython3.9-stdlib=3.9.9-2 libquadmath0=11.2.0-13 libreadline8=8.1-2 libseccomp2=2.5.3-2 libselinux1=3.3-1+b1 libsigsegv2=2.13-1 libsmartcols1=2.37.2-4 libsqlite3-0=3.36.0-2 libssl1.1=1.1.1l-1 libstdc++-11-dev=11.2.0-13 libstdc++6=11.2.0-13 libsub-override-perl=0.09-2 libsystemd0=249.7-1 libtinfo6=6.3-1 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.6-15 libtsan0=11.2.0-13 libubsan1=11.2.0-13 libuchardet0=0.0.7-1 libudev1=249.7-1 libunistring2=0.9.10-6 libuuid1=2.37.2-4 libxml2=2.9.12+dfsg-5+b1 libzstd1=1.4.8+dfsg-3 linux-libc-dev=5.15.5-2 login=1:4.8.1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.9.4-2 mawk=1.3.4.20200120-2 media-types=4.0.0 ncurses-base=6.3-1 ncurses-bin=6.3-1 patch=2.7.6-7 perl=5.32.1-6 perl-base=5.32.1-6 perl-modules-5.32=5.32.1-6 po-debconf=1.0.21+nmu1 procps=2:3.3.17-5 python3=3.9.8-1 python3-all=3.9.8-1 python3-all-dev=3.9.8-1 python3-attr=21.2.0-1 python3-decorator=4.4.2-2 python3-dev=3.9.8-1 python3-distutils=3.9.9-3 python3-importlib-metadata=4.6.4-1 python3-iniconfig=1.1.1-1 python3-joblib=0.17.0-4 python3-lib2to3=3.9.9-3 python3-minimal=3.9.8-1 python3-more-itertools=8.10.0-2 python3-numpy=1:1.21.5-1 python3-packaging=21.3-1 python3-pkg-resources=59.6.0-1 python3-pluggy=0.13.0-7.1 python3-py=1.10.0-1 python3-pyparsing=2.4.7-1 python3-pytest=6.2.5-1 python3-pytest-runner=2.11.1-1.2 python3-scipy=1.7.1-2+b1 python3-setuptools=59.6.0-1 python3-sklearn=1.0.1-1 python3-sklearn-lib=1.0.1-1 python3-threadpoolctl=2.1.0-1 python3-toml=0.10.2-1 python3-zipp=1.0.0-3 python3.10=3.10.1-2 python3.10-dev=3.10.1-2 python3.10-minimal=3.10.1-2 python3.9=3.9.9-2 python3.9-dev=3.9.9-2 python3.9-minimal=3.9.9-2 readline-common=8.1-2 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sysvinit-utils=3.01-1 tar=1.34+dfsg-1 tzdata=2021e-1 util-linux=2.37.2-4 xz-utils=5.2.5-2 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20211222T152232Z/ unstable main deb-src http://snapshot.notset.fr/archive/debian/20211222T152232Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20211223T212845Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d opentsne=0.6.1-2 && mkdir -p /build/opentsne-EPIPPU && dpkg-source --no-check -x /*.dsc /build/opentsne-EPIPPU/opentsne-0.6.1 && chown -R builduser:builduser /build/opentsne-EPIPPU" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/opentsne-EPIPPU/opentsne-0.6.1 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1640168977" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/opentsne-EPIPPU /tmp/opentsne-0.6.1-2e6ex72oq bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20211223T212845Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.Za1QygOoxj as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.Za1QygOoxj Reading package lists... Building dependency tree... util-linux is already the newest version (2.37.2-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20211223T212845Z unstable/main amd64 libfakeroot amd64 1.26-1 [47.3 kB] Get:2 http://snapshot.notset.fr/archive/debian/20211223T212845Z unstable/main amd64 fakeroot amd64 1.26-1 [87.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (960 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4680 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.26-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.26-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.26-1_amd64.deb ... Unpacking fakeroot (1.26-1) ... Setting up libfakeroot:amd64 (1.26-1) ... Setting up fakeroot (1.26-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-1) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20211222T152232Z/ unstable main deb-src http://snapshot.notset.fr/archive/debian/20211222T152232Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20211223T212845Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.Za1QygOoxj Get:1 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable InRelease [165 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20211223T212845Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable/main Sources [12.5 MB] Get:4 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable/main amd64 Packages [12.0 MB] Fetched 24.6 MB in 21s (1192 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.Za1QygOoxj I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d opentsne=0.6.1-2 && mkdir -p /build/opentsne-EPIPPU && dpkg-source --no-check -x /*.dsc /build/opentsne-EPIPPU/opentsne-0.6.1 && chown -R builduser:builduser /build/opentsne-EPIPPU"' exec /tmp/mmdebstrap.Za1QygOoxj Reading package lists... NOTICE: 'opentsne' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/opentsne.git Please use: git clone https://salsa.debian.org/science-team/opentsne.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 23.3 MB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable/main opentsne 0.6.1-2 (dsc) [2483 B] Get:2 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable/main opentsne 0.6.1-2 (tar) [23.3 MB] Get:3 http://snapshot.notset.fr/archive/debian/20211222T152232Z unstable/main opentsne 0.6.1-2 (diff) [3096 B] Fetched 23.3 MB in 18s (1275 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'opentsne_0.6.1-2.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting opentsne in /build/opentsne-EPIPPU/opentsne-0.6.1 dpkg-source: info: unpacking opentsne_0.6.1.orig.tar.gz dpkg-source: info: unpacking opentsne_0.6.1-2.debian.tar.xz I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/opentsne-EPIPPU/opentsne-0.6.1 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1640168977" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.Za1QygOoxj dpkg-buildpackage: info: source package opentsne dpkg-buildpackage: info: source version 0.6.1-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Picca Frédéric-Emmanuel dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:237: python3.10 setup.py clean /build/opentsne-EPIPPU/opentsne-0.6.1/setup.py:1: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives import distutils warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'dest_sig' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'arg' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'dtype' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'arg_base' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'candidates' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'sig' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'match_found' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'src_sig' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'dst_type' warning: openTSNE/_tsne.pyx:535:8: implicit declaration of 'coord_max' warning: openTSNE/_tsne.pyx:537:8: implicit declaration of 'coord_min' warning: openTSNE/kl_divergence.pyx:16:19: implicit declaration of 'estimate_positive_gradient_nn' FFTW3 header files found. Using FFTW implementation of FFT. Compiling openTSNE/_tsne.pyx because it depends on /usr/lib/python3/dist-packages/numpy/__init__.pxd. Compiling openTSNE/kl_divergence.pyx because it depends on /usr/lib/python3/dist-packages/numpy/__init__.pxd. Compiling openTSNE/_matrix_mul/matrix_mul_fftw3.pyx because it depends on /usr/lib/python3/dist-packages/numpy/__init__.pxd. [1/3] Cythonizing openTSNE/_matrix_mul/matrix_mul_fftw3.pyx [2/3] Cythonizing openTSNE/_tsne.pyx [3/3] Cythonizing openTSNE/kl_divergence.pyx running clean removing '/build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.10' does not exist -- can't clean it I: pybuild base:237: python3.9 setup.py clean FFTW3 header files found. Using FFTW implementation of FFT. running clean removing '/build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules execute_after_dh_clean make[1]: Entering directory '/build/opentsne-EPIPPU/opentsne-0.6.1' # remove the cython generated file to force rebuild rm -f openTSNE/_tsne.cpp openTSNE/kl_divergence.cpp openTSNE/quad_tree.cpp openTSNE/_matrix_mul/matrix_mul_fftw3.cpp openTSNE/_matrix_mul/matrix_mul_numpy.cpp make[1]: Leaving directory '/build/opentsne-EPIPPU/opentsne-0.6.1' debian/rules build-arch dh build-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:237: python3.10 setup.py config /build/opentsne-EPIPPU/opentsne-0.6.1/setup.py:1: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives import distutils warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'dest_sig' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'arg' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'dtype' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'arg_base' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'candidates' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'sig' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'match_found' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'src_sig' warning: openTSNE/_tsne.pyx:103:6: implicit declaration of 'dst_type' warning: openTSNE/_tsne.pyx:535:8: implicit declaration of 'coord_max' warning: openTSNE/_tsne.pyx:537:8: implicit declaration of 'coord_min' warning: openTSNE/kl_divergence.pyx:16:19: implicit declaration of 'estimate_positive_gradient_nn' warning: openTSNE/quad_tree.pyx:163:24: Not all members given for struct 'Node' warning: openTSNE/quad_tree.pyx:163:24: Not all members given for struct 'Node' FFTW3 header files found. Using FFTW implementation of FFT. Compiling openTSNE/quad_tree.pyx because it changed. Compiling openTSNE/_tsne.pyx because it changed. Compiling openTSNE/kl_divergence.pyx because it changed. Compiling openTSNE/_matrix_mul/matrix_mul_fftw3.pyx because it changed. [1/4] Cythonizing openTSNE/_matrix_mul/matrix_mul_fftw3.pyx [2/4] Cythonizing openTSNE/_tsne.pyx [3/4] Cythonizing openTSNE/kl_divergence.pyx [4/4] Cythonizing openTSNE/quad_tree.pyx running config I: pybuild base:237: python3.9 setup.py config FFTW3 header files found. Using FFTW implementation of FFT. running config dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:237: /usr/bin/python3.10 setup.py build /build/opentsne-EPIPPU/opentsne-0.6.1/setup.py:1: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives import distutils FFTW3 header files found. Using FFTW implementation of FFT. running build running build_py creating /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE copying openTSNE/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE copying openTSNE/affinity.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE copying openTSNE/callbacks.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE copying openTSNE/initialization.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE copying openTSNE/metrics.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE copying openTSNE/nearest_neighbors.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE copying openTSNE/sklearn.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE copying openTSNE/tsne.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE copying openTSNE/utils.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE copying openTSNE/version.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE creating /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/_matrix_mul copying openTSNE/_matrix_mul/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/_matrix_mul creating /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/dependencies copying openTSNE/dependencies/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/dependencies creating /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/dependencies/annoy copying openTSNE/dependencies/annoy/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/dependencies/annoy running build_ext x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -c ./tmpeqlq6aw6/omp.c -o ./tmpeqlq6aw6/omp.o Found openmp. Compiling with openmp flags... building 'openTSNE.quad_tree' extension creating build creating build/temp.linux-x86_64-3.10 creating build/temp.linux-x86_64-3.10/openTSNE x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c openTSNE/quad_tree.cpp -o build/temp.linux-x86_64-3.10/openTSNE/quad_tree.o -O3 -march=native -fopenmp x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/openTSNE/quad_tree.o -L/usr/Library/lib -o /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/quad_tree.cpython-310-x86_64-linux-gnu.so -fopenmp building 'openTSNE._tsne' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c openTSNE/_tsne.cpp -o build/temp.linux-x86_64-3.10/openTSNE/_tsne.o -O3 -march=native -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from openTSNE/_tsne.cpp:648: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/openTSNE/_tsne.o -L/usr/Library/lib -o /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/_tsne.cpython-310-x86_64-linux-gnu.so -fopenmp building 'openTSNE.kl_divergence' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c openTSNE/kl_divergence.cpp -o build/temp.linux-x86_64-3.10/openTSNE/kl_divergence.o -O3 -march=native -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from openTSNE/kl_divergence.cpp:648: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/openTSNE/kl_divergence.o -L/usr/Library/lib -o /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/kl_divergence.cpython-310-x86_64-linux-gnu.so -fopenmp building 'openTSNE.dependencies.annoy.annoylib' extension creating build/temp.linux-x86_64-3.10/openTSNE/dependencies creating build/temp.linux-x86_64-3.10/openTSNE/dependencies/annoy x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c openTSNE/dependencies/annoy/annoymodule.cc -o build/temp.linux-x86_64-3.10/openTSNE/dependencies/annoy/annoymodule.o -std=c++14 -DANNOYLIB_MULTITHREADED_BUILD -O3 -march=native -fopenmp x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/openTSNE/dependencies/annoy/annoymodule.o -L/usr/Library/lib -o /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/dependencies/annoy/annoylib.cpython-310-x86_64-linux-gnu.so -fopenmp building 'openTSNE._matrix_mul.matrix_mul' extension creating build/temp.linux-x86_64-3.10/openTSNE/_matrix_mul x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.10 -c openTSNE/_matrix_mul/matrix_mul_fftw3.cpp -o build/temp.linux-x86_64-3.10/openTSNE/_matrix_mul/matrix_mul_fftw3.o -O3 -march=native -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from openTSNE/_matrix_mul/matrix_mul_fftw3.cpp:651: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/openTSNE/_matrix_mul/matrix_mul_fftw3.o -L/usr/Library/lib -lfftw3 -o /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/_matrix_mul/matrix_mul.cpython-310-x86_64-linux-gnu.so -fopenmp I: pybuild base:237: /usr/bin/python3 setup.py build FFTW3 header files found. Using FFTW implementation of FFT. running build running build_py creating /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE copying openTSNE/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE copying openTSNE/affinity.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE copying openTSNE/callbacks.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE copying openTSNE/initialization.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE copying openTSNE/metrics.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE copying openTSNE/nearest_neighbors.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE copying openTSNE/sklearn.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE copying openTSNE/tsne.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE copying openTSNE/utils.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE copying openTSNE/version.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE creating /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/_matrix_mul copying openTSNE/_matrix_mul/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/_matrix_mul creating /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/dependencies copying openTSNE/dependencies/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/dependencies creating /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/dependencies/annoy copying openTSNE/dependencies/annoy/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/dependencies/annoy running build_ext x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -c ./tmp98rtofco/omp.c -o ./tmp98rtofco/omp.o Found openmp. Compiling with openmp flags... building 'openTSNE.quad_tree' extension creating build/temp.linux-x86_64-3.9 creating build/temp.linux-x86_64-3.9/openTSNE x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c openTSNE/quad_tree.cpp -o build/temp.linux-x86_64-3.9/openTSNE/quad_tree.o -O3 -march=native -fopenmp x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/openTSNE/quad_tree.o -L/usr/Library/lib -o /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/quad_tree.cpython-39-x86_64-linux-gnu.so -fopenmp building 'openTSNE._tsne' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c openTSNE/_tsne.cpp -o build/temp.linux-x86_64-3.9/openTSNE/_tsne.o -O3 -march=native -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from openTSNE/_tsne.cpp:648: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/openTSNE/_tsne.o -L/usr/Library/lib -o /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/_tsne.cpython-39-x86_64-linux-gnu.so -fopenmp building 'openTSNE.kl_divergence' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c openTSNE/kl_divergence.cpp -o build/temp.linux-x86_64-3.9/openTSNE/kl_divergence.o -O3 -march=native -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from openTSNE/kl_divergence.cpp:648: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/openTSNE/kl_divergence.o -L/usr/Library/lib -o /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/kl_divergence.cpython-39-x86_64-linux-gnu.so -fopenmp building 'openTSNE.dependencies.annoy.annoylib' extension creating build/temp.linux-x86_64-3.9/openTSNE/dependencies creating build/temp.linux-x86_64-3.9/openTSNE/dependencies/annoy x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c openTSNE/dependencies/annoy/annoymodule.cc -o build/temp.linux-x86_64-3.9/openTSNE/dependencies/annoy/annoymodule.o -std=c++14 -DANNOYLIB_MULTITHREADED_BUILD -O3 -march=native -fopenmp x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/openTSNE/dependencies/annoy/annoymodule.o -L/usr/Library/lib -o /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/dependencies/annoy/annoylib.cpython-39-x86_64-linux-gnu.so -fopenmp building 'openTSNE._matrix_mul.matrix_mul' extension creating build/temp.linux-x86_64-3.9/openTSNE/_matrix_mul x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c openTSNE/_matrix_mul/matrix_mul_fftw3.cpp -o build/temp.linux-x86_64-3.9/openTSNE/_matrix_mul/matrix_mul_fftw3.o -O3 -march=native -fopenmp In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from openTSNE/_matrix_mul/matrix_mul_fftw3.cpp:651: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ x86_64-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/openTSNE/_matrix_mul/matrix_mul_fftw3.o -L/usr/Library/lib -lfftw3 -o /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/_matrix_mul/matrix_mul.cpython-39-x86_64-linux-gnu.so -fopenmp dh_auto_test -a -O--buildsystem=pybuild create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-opentsne/ -a -O--buildsystem=pybuild I: pybuild base:237: /usr/bin/python3.10 setup.py install --root /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne /build/opentsne-EPIPPU/opentsne-0.6.1/setup.py:1: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives import distutils FFTW3 header files found. Using FFTW implementation of FFT. running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running build_ext x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -c ./tmpxtq94g4h/omp.c -o ./tmpxtq94g4h/omp.o Found openmp. Compiling with openmp flags... running install_lib creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10 creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/affinity.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/callbacks.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/initialization.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/metrics.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/nearest_neighbors.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/sklearn.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/tsne.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/utils.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/version.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/_matrix_mul copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/_matrix_mul/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/_matrix_mul copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/_matrix_mul/matrix_mul.cpython-310-x86_64-linux-gnu.so -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/_matrix_mul creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/dependencies copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/dependencies/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/dependencies creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/dependencies/annoy copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/dependencies/annoy/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/dependencies/annoy copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/dependencies/annoy/annoylib.cpython-310-x86_64-linux-gnu.so -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/dependencies/annoy copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/quad_tree.cpython-310-x86_64-linux-gnu.so -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/_tsne.cpython-310-x86_64-linux-gnu.so -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.10_opentsne/build/openTSNE/kl_divergence.cpython-310-x86_64-linux-gnu.so -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/__init__.py to __init__.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/affinity.py to affinity.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/callbacks.py to callbacks.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/initialization.py to initialization.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/metrics.py to metrics.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/nearest_neighbors.py to nearest_neighbors.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/sklearn.py to sklearn.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/tsne.py to tsne.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/utils.py to utils.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/version.py to version.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/_matrix_mul/__init__.py to __init__.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/dependencies/__init__.py to __init__.cpython-310.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE/dependencies/annoy/__init__.py to __init__.cpython-310.pyc running install_egg_info running egg_info creating openTSNE.egg-info writing openTSNE.egg-info/PKG-INFO writing dependency_links to openTSNE.egg-info/dependency_links.txt writing requirements to openTSNE.egg-info/requires.txt writing top-level names to openTSNE.egg-info/top_level.txt writing manifest file 'openTSNE.egg-info/SOURCES.txt' reading manifest file 'openTSNE.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.c' under directory 'openTSNE/' adding license file 'LICENSE' writing manifest file 'openTSNE.egg-info/SOURCES.txt' Copying openTSNE.egg-info to /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.10/dist-packages/openTSNE-0.6.1.egg-info Skipping SOURCES.txt running install_scripts I: pybuild base:237: /usr/bin/python3 setup.py install --root /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne FFTW3 header files found. Using FFTW implementation of FFT. running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running build_ext x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/opentsne-EPIPPU/opentsne-0.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -c ./tmpkihgf036/omp.c -o ./tmpkihgf036/omp.o Found openmp. Compiling with openmp flags... running install_lib creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9 creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/affinity.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/callbacks.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/initialization.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/metrics.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/nearest_neighbors.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/sklearn.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/tsne.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/utils.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/version.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/_matrix_mul copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/_matrix_mul/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/_matrix_mul copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/_matrix_mul/matrix_mul.cpython-39-x86_64-linux-gnu.so -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/_matrix_mul creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/dependencies copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/dependencies/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/dependencies creating /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/dependencies/annoy copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/dependencies/annoy/__init__.py -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/dependencies/annoy copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/dependencies/annoy/annoylib.cpython-39-x86_64-linux-gnu.so -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/dependencies/annoy copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/quad_tree.cpython-39-x86_64-linux-gnu.so -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/_tsne.cpython-39-x86_64-linux-gnu.so -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE copying /build/opentsne-EPIPPU/opentsne-0.6.1/.pybuild/cpython3_3.9_opentsne/build/openTSNE/kl_divergence.cpython-39-x86_64-linux-gnu.so -> /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/__init__.py to __init__.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/affinity.py to affinity.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/callbacks.py to callbacks.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/initialization.py to initialization.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/metrics.py to metrics.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/nearest_neighbors.py to nearest_neighbors.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/sklearn.py to sklearn.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/tsne.py to tsne.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/utils.py to utils.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/version.py to version.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/_matrix_mul/__init__.py to __init__.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/dependencies/__init__.py to __init__.cpython-39.pyc byte-compiling /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE/dependencies/annoy/__init__.py to __init__.cpython-39.pyc running install_egg_info running egg_info writing openTSNE.egg-info/PKG-INFO writing dependency_links to openTSNE.egg-info/dependency_links.txt writing requirements to openTSNE.egg-info/requires.txt writing top-level names to openTSNE.egg-info/top_level.txt reading manifest file 'openTSNE.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.c' under directory 'openTSNE/' adding license file 'LICENSE' writing manifest file 'openTSNE.egg-info/SOURCES.txt' Copying openTSNE.egg-info to /build/opentsne-EPIPPU/opentsne-0.6.1/debian/python3-opentsne/usr/lib/python3.9/dist-packages/openTSNE-0.6.1.egg-info Skipping SOURCES.txt running install_scripts dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild dh_installinit -a -O--buildsystem=pybuild dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: package python3-opentsne: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-opentsne: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-opentsne: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-opentsne: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'python3-opentsne' in '../python3-opentsne_0.6.1-2_amd64.deb'. dpkg-deb: building package 'python3-opentsne-dbgsym' in '../python3-opentsne-dbgsym_0.6.1-2_amd64.deb'. dpkg-genbuildinfo --build=any -O../opentsne_0.6.1-2_amd64.buildinfo dpkg-genchanges --build=any -O../opentsne_0.6.1-2_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/opentsne-EPIPPU /tmp/opentsne-0.6.1-2e6ex72oq I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.Za1QygOoxj... I: success in 528.2901 seconds md5: Value of 'md5' differs for python3-opentsne-dbgsym_0.6.1-2_amd64.deb md5: Size differs for python3-opentsne-dbgsym_0.6.1-2_amd64.deb md5: Value of 'md5' differs for python3-opentsne_0.6.1-2_amd64.deb md5: Size differs for python3-opentsne_0.6.1-2_amd64.deb sha1: Value of 'sha1' differs for python3-opentsne-dbgsym_0.6.1-2_amd64.deb sha1: Size differs for python3-opentsne-dbgsym_0.6.1-2_amd64.deb sha1: Value of 'sha1' differs for python3-opentsne_0.6.1-2_amd64.deb sha1: Size differs for python3-opentsne_0.6.1-2_amd64.deb sha256: Value of 'sha256' differs for python3-opentsne-dbgsym_0.6.1-2_amd64.deb sha256: Size differs for python3-opentsne-dbgsym_0.6.1-2_amd64.deb sha256: Value of 'sha256' differs for python3-opentsne_0.6.1-2_amd64.deb sha256: Size differs for python3-opentsne_0.6.1-2_amd64.deb Checksums: FAIL Cannot generate diffoscope for python3-opentsne-dbgsym_0.6.1-2_amd64.deb: Cannot find URL: http://snapshot.notset.fr/mr/file/e857cfee8e0b328321ec2709a9aaf9a13feb88ac6f715d27e6d1c603b1dbaf14/download Cannot generate diffoscope for python3-opentsne_0.6.1-2_amd64.deb: RetryError[]