Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/o/obitools/obitools_1.2.13+dfsg-4+b1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/obitools-1.2.13+dfsg-4+b1cmlrml_x/obitools_1.2.13+dfsg-4+b1_amd64.buildinfo Get source package info: obitools=1.2.13+dfsg-4 Source URL: http://snapshot.notset.fr/mr/package/obitools/1.2.13+dfsg-4/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6 binutils=2.38-3 binutils-common=2.38-3 binutils-x86-64-linux-gnu=2.38-3 bsdextrautils=2.37.3-1+b1 bsdutils=1:2.37.3-1+b1 build-essential=12.9 bzip2=1.0.8-5 ca-certificates=20211016 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.2.0-19 cython3=0.29.28-3 dash=0.5.11+git20210903+057cd650a4ed-8 debconf=1.5.79 debhelper=13.6 debianutils=5.7-0.1 dh-autoreconf=20 dh-python=5.20220215 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 docutils-common=0.17.1+dfsg-2 dpkg=1.21.4 dpkg-dev=1.21.4 dwz=0.14-1 file=1:5.41-3 findutils=4.9.0-2 g++=4:11.2.0-2 g++-11=11.2.0-19 gcc=4:11.2.0-2 gcc-11=11.2.0-19 gcc-11-base=11.2.0-19 gcc-12-base=12-20220319-1 gettext=0.21-6 gettext-base=0.21-6 grep=3.7-1 groff-base=1.22.4-8 gzip=1.10-4 hostname=3.23 init-system-helpers=1.62 intltool-debian=0.35.0+20060710.5 ipython3=7.31.1-1 libacl1=2.3.1-1 libarchive-zip-perl=1.68-1 libasan6=11.2.0-19 libatomic1=12-20220319-1 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libbinutils=2.38-3 libblkid1=2.37.3-1+b1 libbz2-1.0=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dev=2.33-7 libcap-ng0=0.7.9-2.2+b1 libcap2=1:2.44-1 libcc1-0=12-20220319-1 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38-3 libctf0=2.38-3 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.261 libdebhelper-perl=13.6 libdpkg-perl=1.21.4 libelf1=0.186-1 libexpat1=2.4.7-1 libexpat1-dev=2.4.7-1 libffi8=3.4.2-4 libfile-stripnondeterminism-perl=1.13.0-1 libgcc-11-dev=11.2.0-19 libgcc-s1=12-20220319-1 libgcrypt20=1.9.4-5 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgmp10=2:6.2.1+dfsg-3 libgomp1=12-20220319-1 libgpg-error0=1.43-3 libgssapi-krb5-2=1.19.2-2+b1 libicu67=67.1-7 libisl23=0.24-2 libitm1=12-20220319-1 libjs-jquery=3.6.0+dfsg+~3.5.13-1 libjs-sphinxdoc=4.3.2-1 libjs-underscore=1.13.2~dfsg-2 libk5crypto3=1.19.2-2+b1 libkeyutils1=1.6.1-3 libkrb5-3=1.19.2-2+b1 libkrb5support0=1.19.2-2+b1 liblsan0=12-20220319-1 liblz4-1=1.9.3-2 liblzma5=5.2.5-2 libmagic-mgc=1:5.41-3 libmagic1=1:5.41-3 libmount1=2.37.3-1+b1 libmpc3=1.2.1-2 libmpdec3=2.5.1-2 libmpfr6=4.1.0-3 libncursesw6=6.3-2 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libpam-modules=1.4.0-11 libpam-modules-bin=1.4.0-11 libpam-runtime=1.4.0-11 libpam0g=1.4.0-11 libpcre2-8-0=10.39-3 libpcre3=2:8.39-13 libperl5.34=5.34.0-3 libpipeline1=1.5.5-1 libpython3-dev=3.10.4-1 libpython3-stdlib=3.10.4-1 libpython3.10=3.10.4-1 libpython3.10-dev=3.10.4-1 libpython3.10-minimal=3.10.4-1 libpython3.10-stdlib=3.10.4-1 libquadmath0=12-20220319-1 libreadline8=8.1.2-1 libseccomp2=2.5.3-2 libselinux1=3.3-1+b2 libsigsegv2=2.14-1 libsmartcols1=2.37.3-1+b1 libsqlite3-0=3.38.1-1 libssl1.1=1.1.1n-1 libstdc++-11-dev=11.2.0-19 libstdc++6=12-20220319-1 libsub-override-perl=0.09-2 libsystemd0=250.4-1 libtinfo6=6.3-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.7-2 libtsan0=11.2.0-19 libubsan1=12-20220319-1 libuchardet0=0.0.7-1 libudev1=250.4-1 libunistring2=1.0-1 libuuid1=2.37.3-1+b1 libxml2=2.9.13+dfsg-1 libzstd1=1.4.9+dfsg-1 linux-libc-dev=5.16.14-1 login=1:4.11.1+dfsg1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.2-1 mawk=1.3.4.20200120-3+b1 media-types=7.0.0 ncurses-base=6.3-2 ncurses-bin=6.3-2 openssl=1.1.1n-1 patch=2.7.6-7 perl=5.34.0-3 perl-base=5.34.0-3 perl-modules-5.34=5.34.0-3 po-debconf=1.0.21+nmu1 python-babel-localedata=2.8.0+dfsg.1-7 python3=3.10.4-1 python3-alabaster=0.7.12-1 python3-babel=2.8.0+dfsg.1-7 python3-backcall=0.2.0-3 python3-certifi=2020.6.20-1 python3-chardet=4.0.0-1 python3-charset-normalizer=2.0.6-2 python3-decorator=4.4.2-2 python3-dev=3.10.4-1 python3-distlib=0.3.4-1 python3-distutils=3.9.12-1 python3-docutils=0.17.1+dfsg-2 python3-filelock=3.6.0-1 python3-idna=3.3-1 python3-imagesize=1.3.0-1 python3-ipython=7.31.1-1 python3-jedi=0.18.0-1 python3-jinja2=3.0.3-1 python3-lib2to3=3.9.12-1 python3-markupsafe=2.0.1-2+b1 python3-matplotlib-inline=0.1.3-1 python3-minimal=3.10.4-1 python3-packaging=21.3-1 python3-parso=0.8.1-1 python3-pexpect=4.8.0-2 python3-pickleshare=0.7.5-5 python3-pip=22.0.2+dfsg-1 python3-pip-whl=22.0.2+dfsg-1 python3-pkg-resources=59.6.0-1.2 python3-platformdirs=2.5.1-1 python3-prompt-toolkit=3.0.28-1 python3-ptyprocess=0.7.0-3 python3-pygments=2.11.2+dfsg-2 python3-pyparsing=3.0.7-1 python3-requests=2.27.1+dfsg-1 python3-roman=3.3-1 python3-setuptools=59.6.0-1.2 python3-setuptools-whl=59.6.0-1.2 python3-six=1.16.0-3 python3-snowballstemmer=2.2.0-1 python3-sphinx=4.3.2-1 python3-traitlets=5.1.1-1 python3-tz=2022.1-1 python3-urllib3=1.26.9-1 python3-virtualenv=20.13.0+ds-2 python3-wcwidth=0.2.5+dfsg1-1 python3-wheel=0.37.1-2 python3-wheel-whl=0.37.1-2 python3.10=3.10.4-1 python3.10-dev=3.10.4-1 python3.10-minimal=3.10.4-1 readline-common=8.1.2-1 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sgml-base=1.30 sphinx-common=4.3.2-1 sysvinit-utils=3.01-1 tar=1.34+dfsg-1 tzdata=2022a-1 util-linux=2.37.3-1+b1 xml-core=0.18+nmu1 xz-utils=5.2.5-2 zlib1g=1:1.2.11.dfsg-4 zlib1g-dev=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20211219T030431Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20211219T030431Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220328T160411Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d obitools=1.2.13+dfsg-4 && mkdir -p /build/obitools-c7h8Wk && dpkg-source --no-check -x /*.dsc /build/obitools-c7h8Wk/obitools-1.2.13+dfsg && cd /build/obitools-c7h8Wk/obitools-1.2.13+dfsg && { printf '%s' 'obitools (1.2.13+dfsg-4+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Python 3.10 as default -- amd64 / i386 Build Daemon (x86-csail-01) Mon, 28 Mar 2022 09:41:59 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/obitools-c7h8Wk" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/obitools-c7h8Wk/obitools-1.2.13+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1648460519" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/obitools-c7h8Wk /tmp/obitools-1.2.13+dfsg-4+b1cmlrml_x bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220328T160411Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.bLrjMwYAmf as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.bLrjMwYAmf Reading package lists... Building dependency tree... util-linux is already the newest version (2.37.3-1+b1). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 135 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220328T160411Z unstable/main amd64 libfakeroot amd64 1.28-1 [48.2 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220328T160411Z unstable/main amd64 fakeroot amd64 1.28-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 135 kB in 0s (890 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4702 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.28-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.28-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.28-1_amd64.deb ... Unpacking fakeroot (1.28-1) ... Setting up libfakeroot:amd64 (1.28-1) ... Setting up fakeroot (1.28-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20211219T030431Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20211219T030431Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220328T160411Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.bLrjMwYAmf Get:1 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm InRelease [129 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20220328T160411Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm/main Sources [11.8 MB] Get:4 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm/main amd64 Packages [11.2 MB] Fetched 23.1 MB in 20s (1179 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.bLrjMwYAmf I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d obitools=1.2.13+dfsg-4 && mkdir -p /build/obitools-c7h8Wk && dpkg-source --no-check -x /*.dsc /build/obitools-c7h8Wk/obitools-1.2.13+dfsg && cd /build/obitools-c7h8Wk/obitools-1.2.13+dfsg && { printf '%s' 'obitools (1.2.13+dfsg-4+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Python 3.10 as default -- amd64 / i386 Build Daemon (x86-csail-01) Mon, 28 Mar 2022 09:41:59 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/obitools-c7h8Wk"' exec /tmp/mmdebstrap.bLrjMwYAmf Reading package lists... NOTICE: 'obitools' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/obitools.git Please use: git clone https://salsa.debian.org/med-team/obitools.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 307 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm/main obitools 1.2.13+dfsg-4 (dsc) [2119 B] Get:2 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm/main obitools 1.2.13+dfsg-4 (tar) [241 kB] Get:3 http://snapshot.notset.fr/archive/debian/20211219T030431Z bookworm/main obitools 1.2.13+dfsg-4 (diff) [63.2 kB] Fetched 307 kB in 0s (1030 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'obitools_1.2.13+dfsg-4.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting obitools in /build/obitools-c7h8Wk/obitools-1.2.13+dfsg dpkg-source: info: unpacking obitools_1.2.13+dfsg.orig.tar.xz dpkg-source: info: unpacking obitools_1.2.13+dfsg-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_libs dpkg-source: info: applying fix_path_interpreter dpkg-source: info: applying 2to3.patch dpkg-source: info: applying port_python3.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/obitools-c7h8Wk/obitools-1.2.13+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1648460519" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.bLrjMwYAmf dpkg-buildpackage: info: source package obitools dpkg-buildpackage: info: source version 1.2.13+dfsg-4+b1 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by amd64 / i386 Build Daemon (x86-csail-01) dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/obitools-c7h8Wk/obitools-1.2.13+dfsg' # skip it make[1]: Leaving directory '/build/obitools-c7h8Wk/obitools-1.2.13+dfsg' dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/build/obitools-c7h8Wk/obitools-1.2.13+dfsg' dh_clean rm -rf build rm -f doc/sphinx/build_dir.txt rm -rf src/OBITools.egg-info make[1]: Leaving directory '/build/obitools-c7h8Wk/obitools-1.2.13+dfsg' debian/rules binary-arch dh binary-arch --with python3 --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:237: python3.10 setup.py config ['src/obitools/_obitools.pyx'] ['src/obitools/options/_bioseqfilter.pyx'] ['src/obitools/options/_options.pyx'] ['src/obitools/tools/_solexapairend.pyx'] ['src/obitools/utils/_utils.pyx'] ['src/obitools/fasta/_fasta.pyx'] ['src/obitools/align/_codonnws.pyx'] ['src/obitools/align/_dynamic.pyx'] ['src/obitools/align/_nws.pyx'] ['src/obitools/align/_freeendgap.pyx'] ['src/obitools/align/_gprofilenws.pyx'] @@@@> ['src/obitools/align/_sse.h'] ['src/obitools/align/_upperbond.pyx', 'src/obitools/align/_upperbond.ext.1.c'] ['src/obitools/align/_rassemble.pyx'] ['src/obitools/align/_assemble.pyx'] ['src/obitools/align/_nwsdnabyprot.pyx'] ['src/obitools/align/_profilenws.pyx'] ['src/obitools/align/_freeendgapfm.pyx'] @@@@> ['src/obitools/align/_lcs.h'] ['src/obitools/align/_lcs.pyx', 'src/obitools/align/_lcs.ext.4.c', 'src/obitools/align/_lcs.ext.3.c', 'src/obitools/align/_lcs.ext.2.c', 'src/obitools/align/_lcs.ext.1.c'] ['src/obitools/align/_qsassemble.pyx'] ['src/obitools/align/_qsrassemble.pyx'] ['src/obitools/profile/_profile.pyx'] @@@@> ['src/obitools/word/_readindex.h'] ['src/obitools/word/_readindex.pyx'] ['src/obitools/word/_binary.pyx'] ['src/obitools/format/_format.pyx'] ['src/obitools/format/genericparser/_genericparser.pyx'] ['src/obitools/fastq/_fastq.pyx'] running config dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:237: /usr/bin/python3 setup.py build ['src/obitools/_obitools.pyx'] ['src/obitools/options/_bioseqfilter.pyx'] ['src/obitools/options/_options.pyx'] ['src/obitools/tools/_solexapairend.pyx'] ['src/obitools/utils/_utils.pyx'] ['src/obitools/fasta/_fasta.pyx'] ['src/obitools/align/_codonnws.pyx'] ['src/obitools/align/_dynamic.pyx'] ['src/obitools/align/_nws.pyx'] ['src/obitools/align/_freeendgap.pyx'] ['src/obitools/align/_gprofilenws.pyx'] @@@@> ['src/obitools/align/_sse.h'] ['src/obitools/align/_upperbond.pyx', 'src/obitools/align/_upperbond.ext.1.c'] ['src/obitools/align/_rassemble.pyx'] ['src/obitools/align/_assemble.pyx'] ['src/obitools/align/_nwsdnabyprot.pyx'] ['src/obitools/align/_profilenws.pyx'] ['src/obitools/align/_freeendgapfm.pyx'] @@@@> ['src/obitools/align/_lcs.h'] ['src/obitools/align/_lcs.pyx', 'src/obitools/align/_lcs.ext.4.c', 'src/obitools/align/_lcs.ext.3.c', 'src/obitools/align/_lcs.ext.2.c', 'src/obitools/align/_lcs.ext.1.c'] ['src/obitools/align/_qsassemble.pyx'] ['src/obitools/align/_qsrassemble.pyx'] ['src/obitools/profile/_profile.pyx'] @@@@> ['src/obitools/word/_readindex.h'] ['src/obitools/word/_readindex.pyx'] ['src/obitools/word/_binary.pyx'] ['src/obitools/format/_format.pyx'] ['src/obitools/format/genericparser/_genericparser.pyx'] ['src/obitools/fastq/_fastq.pyx'] running build Running obidistutils build process running littlebigman creating build creating build/temp.linux-x86_64-3.10 building 'littlebigman' program creating build/temp.linux-x86_64-3.10/distutils.ext creating build/temp.linux-x86_64-3.10/distutils.ext/src x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c distutils.ext/src/littlebigman.c -o build/temp.linux-x86_64-3.10/distutils.ext/src/littlebigman.o -msse2 distutils.ext/src/littlebigman.c: In function ‘main’: distutils.ext/src/littlebigman.c:20:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 20 | else | ^~~~ distutils.ext/src/littlebigman.c:23:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 23 | return 0; | ^~~~~~ x86_64-linux-gnu-gcc -pthread build/temp.linux-x86_64-3.10/distutils.ext/src/littlebigman.o -o build/temp.linux-x86_64-3.10/littlebigman Your CPU is in mode : b'-DLITTLE_END' running build_py creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools copying src/obitools/version.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools copying src/obitools/decorator.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools copying src/obitools/collections.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools copying src/obitools/fast.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools copying src/obitools/gzip.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools copying src/obitools/sample.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools copying src/obitools/solexaPairEnd.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools copying src/obitools/svg.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools copying src/obitools/zipfile.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools copying src/obitools/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools copying src/obitools/SVGdraw.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/statistics copying src/obitools/statistics/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/statistics copying src/obitools/statistics/hypergeometric.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/statistics copying src/obitools/statistics/noncentralhypergeo.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/statistics creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree copying src/obitools/tree/unrooted.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree copying src/obitools/tree/layout.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree copying src/obitools/tree/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree copying src/obitools/tree/svg.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree copying src/obitools/tree/dot.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree copying src/obitools/tree/newick.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options copying src/obitools/options/bioseqcutter.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options copying src/obitools/options/taxonomyfilter.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options copying src/obitools/options/bioseqfilter.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options copying src/obitools/options/bioseqedittag.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options copying src/obitools/options/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/eutils copying src/obitools/eutils/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/eutils creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/sequenceencoder copying src/obitools/sequenceencoder/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/sequenceencoder creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/unit copying src/obitools/unit/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/unit creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/unit/obitools copying src/obitools/unit/obitools/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/unit/obitools creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/parallel copying src/obitools/parallel/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/parallel copying src/obitools/parallel/jobqueue.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/parallel creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tools copying src/obitools/tools/solexapairend.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tools copying src/obitools/tools/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tools creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/phylogeny copying src/obitools/phylogeny/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/phylogeny copying src/obitools/phylogeny/newick.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/phylogeny creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/metabarcoding copying src/obitools/metabarcoding/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/metabarcoding copying src/obitools/metabarcoding/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/metabarcoding creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obischemas copying src/obitools/obischemas/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obischemas copying src/obitools/obischemas/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obischemas creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obischemas/kb copying src/obitools/obischemas/kb/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obischemas/kb copying src/obitools/obischemas/kb/extern.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obischemas/kb creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/solexa copying src/obitools/solexa/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/solexa creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/location copying src/obitools/location/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/location copying src/obitools/location/feature.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/location creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fnaqual copying src/obitools/fnaqual/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fnaqual copying src/obitools/fnaqual/fasta.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fnaqual copying src/obitools/fnaqual/quality.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fnaqual creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage copying src/obitools/barcodecoverage/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage copying src/obitools/barcodecoverage/findErrors.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage copying src/obitools/barcodecoverage/readFiles.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage copying src/obitools/barcodecoverage/calcBc.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage copying src/obitools/barcodecoverage/drawBcTree.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage copying src/obitools/barcodecoverage/writeBcTree.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph copying src/obitools/graph/tree.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph copying src/obitools/graph/dag.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph copying src/obitools/graph/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph copying src/obitools/graph/rootedtree.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/layout copying src/obitools/graph/layout/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/layout copying src/obitools/graph/layout/radialtree.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/layout creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/algorithms copying src/obitools/graph/algorithms/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/algorithms copying src/obitools/graph/algorithms/component.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/algorithms copying src/obitools/graph/algorithms/clique.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/algorithms copying src/obitools/graph/algorithms/compact.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/algorithms creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecotag copying src/obitools/ecotag/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecotag copying src/obitools/ecotag/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecotag creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/goa copying src/obitools/goa/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/goa copying src/obitools/goa/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/goa creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/utils copying src/obitools/utils/iterator.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/utils copying src/obitools/utils/bioseq.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/utils copying src/obitools/utils/crc64.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/utils copying src/obitools/utils/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/utils creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fasta copying src/obitools/fasta/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fasta creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/thermo copying src/obitools/thermo/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/thermo creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/dnahash copying src/obitools/dnahash/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/dnahash creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/carto copying src/obitools/carto/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/carto creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obo copying src/obitools/obo/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obo copying src/obitools/obo/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obo creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obo/go copying src/obitools/obo/go/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obo/go copying src/obitools/obo/go/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obo/go creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align copying src/obitools/align/homopolymere.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align copying src/obitools/align/ssearch.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align copying src/obitools/align/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecopcr copying src/obitools/ecopcr/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecopcr copying src/obitools/ecopcr/annotation.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecopcr copying src/obitools/ecopcr/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecopcr copying src/obitools/ecopcr/sequence.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecopcr copying src/obitools/ecopcr/taxonomy.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecopcr creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/profile copying src/obitools/profile/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/profile creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/table copying src/obitools/table/csv.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/table copying src/obitools/table/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/table creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb copying src/obitools/seqdb/dnaparser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb copying src/obitools/seqdb/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/blastdb copying src/obitools/seqdb/blastdb/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/blastdb creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/embl copying src/obitools/seqdb/embl/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/embl copying src/obitools/seqdb/embl/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/embl creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/genbank copying src/obitools/seqdb/genbank/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/genbank copying src/obitools/seqdb/genbank/ncbi.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/genbank copying src/obitools/seqdb/genbank/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/genbank creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tagmatcher copying src/obitools/tagmatcher/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tagmatcher copying src/obitools/tagmatcher/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tagmatcher copying src/obitools/tagmatcher/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tagmatcher creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/interactive copying src/obitools/interactive/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/interactive creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/alignment copying src/obitools/alignment/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/alignment copying src/obitools/alignment/ace.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/alignment creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/word copying src/obitools/word/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/word copying src/obitools/word/predicate.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/word copying src/obitools/word/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/word creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format copying src/obitools/format/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format copying src/obitools/format/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/ontology copying src/obitools/format/ontology/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/ontology copying src/obitools/format/ontology/go_obo.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/ontology creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence copying src/obitools/format/sequence/embl.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence copying src/obitools/format/sequence/fastq.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence copying src/obitools/format/sequence/tagmatcher.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence copying src/obitools/format/sequence/genbank.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence copying src/obitools/format/sequence/fasta.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence copying src/obitools/format/sequence/fnaqual.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence copying src/obitools/format/sequence/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/genericparser copying src/obitools/format/genericparser/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/genericparser creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/blast copying src/obitools/blast/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/blast creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/distances copying src/obitools/distances/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/distances copying src/obitools/distances/observed.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/distances copying src/obitools/distances/phylip.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/distances copying src/obitools/distances/r.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/distances creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fastq copying src/obitools/fastq/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fastq creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode copying src/obitools/ecobarcode/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode copying src/obitools/ecobarcode/databases.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode copying src/obitools/ecobarcode/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode copying src/obitools/ecobarcode/ecotag.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode copying src/obitools/ecobarcode/rawdata.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode copying src/obitools/ecobarcode/taxonomy.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode running build_ext obitools._obitools src/obitools/_obitools.pyx ok obitools.options._bioseqfilter src/obitools/options/_bioseqfilter.pyx ok obitools.options._options src/obitools/options/_options.pyx ok obitools.tools._solexapairend src/obitools/tools/_solexapairend.pyx ok obitools.utils._utils src/obitools/utils/_utils.pyx ok obitools.fasta._fasta src/obitools/fasta/_fasta.pyx ok obitools.align._codonnws src/obitools/align/_codonnws.pyx ok obitools.align._dynamic src/obitools/align/_dynamic.pyx ok obitools.align._nws src/obitools/align/_nws.pyx ok obitools.align._freeendgap src/obitools/align/_freeendgap.pyx ok obitools.align._gprofilenws src/obitools/align/_gprofilenws.pyx ok obitools.align._upperbond src/obitools/align/_upperbond.pyx ok obitools.align._upperbond src/obitools/align/_upperbond.ext.1.c ok obitools.align._rassemble src/obitools/align/_rassemble.pyx ok obitools.align._assemble src/obitools/align/_assemble.pyx ok obitools.align._nwsdnabyprot src/obitools/align/_nwsdnabyprot.pyx ok obitools.align._profilenws src/obitools/align/_profilenws.pyx ok obitools.align._freeendgapfm src/obitools/align/_freeendgapfm.pyx ok obitools.align._lcs src/obitools/align/_lcs.pyx ok obitools.align._lcs src/obitools/align/_lcs.ext.4.c ok obitools.align._lcs src/obitools/align/_lcs.ext.3.c ok obitools.align._lcs src/obitools/align/_lcs.ext.2.c ok obitools.align._lcs src/obitools/align/_lcs.ext.1.c ok obitools.align._qsassemble src/obitools/align/_qsassemble.pyx ok obitools.align._qsrassemble src/obitools/align/_qsrassemble.pyx ok obitools.profile._profile src/obitools/profile/_profile.pyx ok obitools.word._readindex src/obitools/word/_readindex.pyx ok obitools.word._binary src/obitools/word/_binary.pyx ok obitools.format._format src/obitools/format/_format.pyx ok obitools.format.genericparser._genericparser src/obitools/format/genericparser/_genericparser.pyx ok obitools.fastq._fastq src/obitools/fastq/_fastq.pyx ok #####> ['src/obitools/_obitools.pyx'] cythoning src/obitools/_obitools.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/_obitools.c creating build/temp.linux-x86_64-3.10/pyrex creating build/temp.linux-x86_64-3.10/pyrex/obitools building 'obitools._obitools' extension creating build/temp.linux-x86_64-3.10/build creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10 creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/_obitools.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/_obitools.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/_obitools.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/_obitools.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/options/_bioseqfilter.pyx'] cythoning src/obitools/options/_bioseqfilter.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/options/_bioseqfilter.c creating build/temp.linux-x86_64-3.10/pyrex/obitools/options building 'obitools.options._bioseqfilter' extension creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/options x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/options/_bioseqfilter.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/options/_bioseqfilter.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/options/_bioseqfilter.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options/_bioseqfilter.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/options/_options.pyx'] cythoning src/obitools/options/_options.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/options/_options.c building 'obitools.options._options' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/options/_options.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/options/_options.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/options/_options.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options/_options.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/tools/_solexapairend.pyx'] cythoning src/obitools/tools/_solexapairend.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/tools/_solexapairend.c creating build/temp.linux-x86_64-3.10/pyrex/obitools/tools building 'obitools.tools._solexapairend' extension creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/tools x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/tools/_solexapairend.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/tools/_solexapairend.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/tools/_solexapairend.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tools/_solexapairend.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/utils/_utils.pyx'] cythoning src/obitools/utils/_utils.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/utils/_utils.c creating build/temp.linux-x86_64-3.10/pyrex/obitools/utils building 'obitools.utils._utils' extension creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/utils x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/utils/_utils.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/utils/_utils.o build/temp.linux-x86_64-3.10/pyrex/obitools/utils/_utils.c: In function ‘__pyx_f_8obitools_5utils_6_utils_progressBar’: build/temp.linux-x86_64-3.10/pyrex/obitools/utils/_utils.c:3772:57: warning: field precision specifier ‘.*’ expects argument of type ‘int’, but argument 5 has type ‘long long unsigned int’ [-Wformat=] 3772 | ((void)fprintf(stderr, ((char *)"\r%s %5.1f %% |%.*s%c%.*s] remain : %d days %02d:%02d:%02d"), ((char *)__pyx_t_13), (__pyx_v_percent * 100.0), __pyx_v_fraction, __pyx_v_diese, (__pyx_v_wheel[__pyx_v_arrow]), (50 - __pyx_v_fraction), __pyx_v_spaces, __pyx_v_days, __pyx_v_hour, __pyx_v_minu, __pyx_v_sec)); | ~~^~ ~~~~~~~~~~~~~~~~ | | | | int long long unsigned int build/temp.linux-x86_64-3.10/pyrex/obitools/utils/_utils.c:3772:63: warning: field precision specifier ‘.*’ expects argument of type ‘int’, but argument 8 has type ‘long long unsigned int’ [-Wformat=] 3772 | ((void)fprintf(stderr, ((char *)"\r%s %5.1f %% |%.*s%c%.*s] remain : %d days %02d:%02d:%02d"), ((char *)__pyx_t_13), (__pyx_v_percent * 100.0), __pyx_v_fraction, __pyx_v_diese, (__pyx_v_wheel[__pyx_v_arrow]), (50 - __pyx_v_fraction), __pyx_v_spaces, __pyx_v_days, __pyx_v_hour, __pyx_v_minu, __pyx_v_sec)); | ~~^~ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | int long long unsigned int build/temp.linux-x86_64-3.10/pyrex/obitools/utils/_utils.c:3813:57: warning: field precision specifier ‘.*’ expects argument of type ‘int’, but argument 5 has type ‘long long unsigned int’ [-Wformat=] 3813 | ((void)fprintf(stderr, ((char *)"\r%s %5.1f %% |%.*s%c%.*s] remain : %02d:%02d:%02d"), ((char *)__pyx_t_13), (__pyx_v_percent * 100.), __pyx_v_fraction, __pyx_v_diese, (__pyx_v_wheel[__pyx_v_arrow]), (50 - __pyx_v_fraction), __pyx_v_spaces, __pyx_v_hour, __pyx_v_minu, __pyx_v_sec)); | ~~^~ ~~~~~~~~~~~~~~~~ | | | | int long long unsigned int build/temp.linux-x86_64-3.10/pyrex/obitools/utils/_utils.c:3813:63: warning: field precision specifier ‘.*’ expects argument of type ‘int’, but argument 8 has type ‘long long unsigned int’ [-Wformat=] 3813 | ((void)fprintf(stderr, ((char *)"\r%s %5.1f %% |%.*s%c%.*s] remain : %02d:%02d:%02d"), ((char *)__pyx_t_13), (__pyx_v_percent * 100.), __pyx_v_fraction, __pyx_v_diese, (__pyx_v_wheel[__pyx_v_arrow]), (50 - __pyx_v_fraction), __pyx_v_spaces, __pyx_v_hour, __pyx_v_minu, __pyx_v_sec)); | ~~^~ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | int long long unsigned int x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/utils/_utils.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/utils/_utils.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/fasta/_fasta.pyx'] cythoning src/obitools/fasta/_fasta.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/fasta/_fasta.c creating build/temp.linux-x86_64-3.10/pyrex/obitools/fasta building 'obitools.fasta._fasta' extension creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/fasta x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/fasta/_fasta.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/fasta/_fasta.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/fasta/_fasta.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fasta/_fasta.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_codonnws.pyx'] cythoning src/obitools/align/_codonnws.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_codonnws.c creating build/temp.linux-x86_64-3.10/pyrex/obitools/align building 'obitools.align._codonnws' extension creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_codonnws.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_codonnws.o build/temp.linux-x86_64-3.10/pyrex/obitools/align/_codonnws.c: In function ‘__pyx_f_8obitools_5align_9_codonnws_8CodonNWS_backtrack’: build/temp.linux-x86_64-3.10/pyrex/obitools/align/_codonnws.c:26503:104: warning: ‘__pyx_v_p’ may be used uninitialized in this function [-Wmaybe-uninitialized] 26503 | (__pyx_v_self->__pyx_base.__pyx_base.path->path[__pyx_v_self->__pyx_base.__pyx_base.path->length]) = __pyx_v_p; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_codonnws.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_codonnws.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_dynamic.pyx'] cythoning src/obitools/align/_dynamic.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_dynamic.c building 'obitools.align._dynamic' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_dynamic.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_dynamic.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_dynamic.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_dynamic.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_nws.pyx'] cythoning src/obitools/align/_nws.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nws.c building 'obitools.align._nws' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nws.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nws.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nws.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_nws.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_freeendgap.pyx'] cythoning src/obitools/align/_freeendgap.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_freeendgap.c building 'obitools.align._freeendgap' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_freeendgap.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_freeendgap.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_freeendgap.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_freeendgap.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_gprofilenws.pyx'] cythoning src/obitools/align/_gprofilenws.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_gprofilenws.c building 'obitools.align._gprofilenws' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_gprofilenws.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_gprofilenws.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_gprofilenws.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_gprofilenws.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_upperbond.pyx', 'src/obitools/align/_upperbond.ext.1.c'] cythoning src/obitools/align/_upperbond.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_upperbond.c building 'obitools.align._upperbond' extension creating build/temp.linux-x86_64-3.10/src creating build/temp.linux-x86_64-3.10/src/obitools creating build/temp.linux-x86_64-3.10/src/obitools/align x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/obitools/align -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_upperbond.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_upperbond.o -msse2 x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/obitools/align -I/usr/include/python3.10 -c src/obitools/align/_upperbond.ext.1.c -o build/temp.linux-x86_64-3.10/src/obitools/align/_upperbond.ext.1.o -msse2 src/obitools/align/_upperbond.ext.1.c: In function ‘buildTable’: src/obitools/align/_upperbond.ext.1.c:96:12: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 96 | if (zero.c[0]+zero.c[1]+zero.c[2]+zero.c[3]==0) | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_upperbond.o build/temp.linux-x86_64-3.10/src/obitools/align/_upperbond.ext.1.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_upperbond.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_rassemble.pyx'] cythoning src/obitools/align/_rassemble.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_rassemble.c building 'obitools.align._rassemble' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_rassemble.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_rassemble.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_rassemble.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_rassemble.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_assemble.pyx'] cythoning src/obitools/align/_assemble.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_assemble.c building 'obitools.align._assemble' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_assemble.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_assemble.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_assemble.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_assemble.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_nwsdnabyprot.pyx'] cythoning src/obitools/align/_nwsdnabyprot.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nwsdnabyprot.c building 'obitools.align._nwsdnabyprot' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nwsdnabyprot.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nwsdnabyprot.o build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nwsdnabyprot.c: In function ‘__pyx_f_8obitools_5align_13_nwsdnabyprot_12NWSDNAByProt_doAlignment’: build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nwsdnabyprot.c:4901:29: warning: ‘__pyx_v_smatrix’ may be used uninitialized in this function [-Wmaybe-uninitialized] 4901 | __pyx_r = (__pyx_v_smatrix[__pyx_v_idx]).score; | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nwsdnabyprot.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_nwsdnabyprot.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_profilenws.pyx'] cythoning src/obitools/align/_profilenws.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_profilenws.c building 'obitools.align._profilenws' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_profilenws.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_profilenws.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_profilenws.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_profilenws.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_freeendgapfm.pyx'] cythoning src/obitools/align/_freeendgapfm.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_freeendgapfm.c building 'obitools.align._freeendgapfm' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_freeendgapfm.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_freeendgapfm.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_freeendgapfm.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_freeendgapfm.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_lcs.pyx', 'src/obitools/align/_lcs.ext.4.c', 'src/obitools/align/_lcs.ext.3.c', 'src/obitools/align/_lcs.ext.2.c', 'src/obitools/align/_lcs.ext.1.c'] cythoning src/obitools/align/_lcs.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_lcs.c building 'obitools.align._lcs' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/obitools/align -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_lcs.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_lcs.o -msse2 x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/obitools/align -I/usr/include/python3.10 -c src/obitools/align/_lcs.ext.1.c -o build/temp.linux-x86_64-3.10/src/obitools/align/_lcs.ext.1.o -msse2 src/obitools/align/_lcs.ext.1.c: In function ‘simpleLCS’: src/obitools/align/_lcs.ext.1.c:159:25: warning: ‘pl’ may be used uninitialized in this function [-Wmaybe-uninitialized] 159 | if(lpath) *lpath=pl; | ~~~~~~^~~ src/obitools/align/_lcs.ext.1.c:166:16: warning: ‘sl’ may be used uninitialized in this function [-Wmaybe-uninitialized] 166 | return lcs; | ^~~ x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/obitools/align -I/usr/include/python3.10 -c src/obitools/align/_lcs.ext.2.c -o build/temp.linux-x86_64-3.10/src/obitools/align/_lcs.ext.2.o -msse2 In file included from src/obitools/align/_lcs.ext.2.c:34: src/obitools/align/_lcs_fast.h:8:14: warning: ‘printreg’ defined but not used [-Wunused-function] 8 | static void printreg(VTYPE r) | ^~~~~~~~ x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/obitools/align -I/usr/include/python3.10 -c src/obitools/align/_lcs.ext.3.c -o build/temp.linux-x86_64-3.10/src/obitools/align/_lcs.ext.3.o -msse2 In file included from src/obitools/align/_lcs.ext.3.c:34: src/obitools/align/_lcs_fast.h:8:14: warning: ‘printreg’ defined but not used [-Wunused-function] 8 | static void printreg(VTYPE r) | ^~~~~~~~ x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/obitools/align -I/usr/include/python3.10 -c src/obitools/align/_lcs.ext.4.c -o build/temp.linux-x86_64-3.10/src/obitools/align/_lcs.ext.4.o -msse2 src/obitools/align/_lcs.ext.4.c: In function ‘buildTable’: src/obitools/align/_lcs.ext.4.c:96:12: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 96 | if (zero.c[0]+zero.c[1]+zero.c[2]+zero.c[3]==0) | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_lcs.o build/temp.linux-x86_64-3.10/src/obitools/align/_lcs.ext.1.o build/temp.linux-x86_64-3.10/src/obitools/align/_lcs.ext.2.o build/temp.linux-x86_64-3.10/src/obitools/align/_lcs.ext.3.o build/temp.linux-x86_64-3.10/src/obitools/align/_lcs.ext.4.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_lcs.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_qsassemble.pyx'] cythoning src/obitools/align/_qsassemble.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_qsassemble.c building 'obitools.align._qsassemble' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_qsassemble.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_qsassemble.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_qsassemble.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_qsassemble.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/align/_qsrassemble.pyx'] cythoning src/obitools/align/_qsrassemble.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/align/_qsrassemble.c building 'obitools.align._qsrassemble' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/align/_qsrassemble.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_qsrassemble.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/align/_qsrassemble.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_qsrassemble.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/profile/_profile.pyx'] cythoning src/obitools/profile/_profile.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/profile/_profile.c creating build/temp.linux-x86_64-3.10/pyrex/obitools/profile building 'obitools.profile._profile' extension creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/profile x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/profile/_profile.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/profile/_profile.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/profile/_profile.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/profile/_profile.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/word/_readindex.pyx'] cythoning src/obitools/word/_readindex.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/word/_readindex.c creating build/temp.linux-x86_64-3.10/pyrex/obitools/word building 'obitools.word._readindex' extension creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/word x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/obitools/word -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/word/_readindex.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/word/_readindex.o -msse2 build/temp.linux-x86_64-3.10/pyrex/obitools/word/_readindex.c: In function ‘__pyx_pf_8obitools_4word_10_readindex_9ReadIndex_10indexWords’: build/temp.linux-x86_64-3.10/pyrex/obitools/word/_readindex.c:6224:3: warning: implicit declaration of function ‘heapsort’ [-Wimplicit-function-declaration] 6224 | heapsort(__pyx_v_self->_wordlist, __pyx_v_i, (sizeof(pobinuc)), __pyx_f_8obitools_4word_10_readindex_cmpwords); | ^~~~~~~~ build/temp.linux-x86_64-3.10/pyrex/obitools/word/_readindex.c: In function ‘__pyx_gb_8obitools_4word_10_readindex_9ReadIndex_14generator’: build/temp.linux-x86_64-3.10/pyrex/obitools/word/_readindex.c:6493:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 6493 | for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { | ^ build/temp.linux-x86_64-3.10/pyrex/obitools/word/_readindex.c: In function ‘__pyx_gb_8obitools_4word_10_readindex_9ReadIndex_17generator1’: build/temp.linux-x86_64-3.10/pyrex/obitools/word/_readindex.c:6691:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 6691 | for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/word/_readindex.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/word/_readindex.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/word/_binary.pyx'] cythoning src/obitools/word/_binary.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/word/_binary.c building 'obitools.word._binary' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/word/_binary.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/word/_binary.o build/temp.linux-x86_64-3.10/pyrex/obitools/word/_binary.c: In function ‘__pyx_f_8obitools_4word_7_binary_bin2str’: build/temp.linux-x86_64-3.10/pyrex/obitools/word/_binary.c:1741:33: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 1741 | for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/word/_binary.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/word/_binary.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/format/_format.pyx'] cythoning src/obitools/format/_format.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/format/_format.c creating build/temp.linux-x86_64-3.10/pyrex/obitools/format building 'obitools.format._format' extension creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/format x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/format/_format.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/format/_format.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/format/_format.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/_format.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/format/genericparser/_genericparser.pyx'] cythoning src/obitools/format/genericparser/_genericparser.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/format/genericparser/_genericparser.c creating build/temp.linux-x86_64-3.10/pyrex/obitools/format/genericparser building 'obitools.format.genericparser._genericparser' extension creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/format/genericparser x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/format/genericparser/_genericparser.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/format/genericparser/_genericparser.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/format/genericparser/_genericparser.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/genericparser/_genericparser.cpython-310-x86_64-linux-gnu.so #####> ['src/obitools/fastq/_fastq.pyx'] cythoning src/obitools/fastq/_fastq.pyx to build/temp.linux-x86_64-3.10/pyrex/obitools/fastq/_fastq.c creating build/temp.linux-x86_64-3.10/pyrex/obitools/fastq building 'obitools.fastq._fastq' extension creating build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/fastq x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c build/temp.linux-x86_64-3.10/pyrex/obitools/fastq/_fastq.c -o build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/fastq/_fastq.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/build/temp.linux-x86_64-3.10/pyrex/obitools/fastq/_fastq.o -o /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fastq/_fastq.cpython-310-x86_64-linux-gnu.so running build_scripts creating build/scripts-3.10 creating build/raw_scripts Store the raw script src/obisample.py -> build/raw_scripts/obisample.py copying src/obisample.py -> build/raw_scripts copying and adjusting src/obisample.py -> build/scripts-3.10 Store the raw script src/ecotag.py -> build/raw_scripts/ecotag.py copying src/ecotag.py -> build/raw_scripts copying and adjusting src/ecotag.py -> build/scripts-3.10 Store the raw script src/ecotaxspecificity.py -> build/raw_scripts/ecotaxspecificity.py copying src/ecotaxspecificity.py -> build/raw_scripts copying and adjusting src/ecotaxspecificity.py -> build/scripts-3.10 Store the raw script src/extractreads.py -> build/raw_scripts/extractreads.py copying src/extractreads.py -> build/raw_scripts copying and adjusting src/extractreads.py -> build/scripts-3.10 Store the raw script src/extractreads2.py -> build/raw_scripts/extractreads2.py copying src/extractreads2.py -> build/raw_scripts copying and adjusting src/extractreads2.py -> build/scripts-3.10 Store the raw script src/illuminapairedend.py -> build/raw_scripts/illuminapairedend.py copying src/illuminapairedend.py -> build/raw_scripts copying and adjusting src/illuminapairedend.py -> build/scripts-3.10 Store the raw script src/ngsfilter.py -> build/raw_scripts/ngsfilter.py copying src/ngsfilter.py -> build/raw_scripts copying and adjusting src/ngsfilter.py -> build/scripts-3.10 Store the raw script src/obiaddtaxids.py -> build/raw_scripts/obiaddtaxids.py copying src/obiaddtaxids.py -> build/raw_scripts copying and adjusting src/obiaddtaxids.py -> build/scripts-3.10 Store the raw script src/obiclean.py -> build/raw_scripts/obiclean.py copying src/obiclean.py -> build/raw_scripts copying and adjusting src/obiclean.py -> build/scripts-3.10 Store the raw script src/obiconvert.py -> build/raw_scripts/obiconvert.py copying src/obiconvert.py -> build/raw_scripts copying and adjusting src/obiconvert.py -> build/scripts-3.10 Store the raw script src/obicount.py -> build/raw_scripts/obicount.py copying src/obicount.py -> build/raw_scripts copying and adjusting src/obicount.py -> build/scripts-3.10 Store the raw script src/obicut.py -> build/raw_scripts/obicut.py copying src/obicut.py -> build/raw_scripts copying and adjusting src/obicut.py -> build/scripts-3.10 Store the raw script src/obidistribute.py -> build/raw_scripts/obidistribute.py copying src/obidistribute.py -> build/raw_scripts copying and adjusting src/obidistribute.py -> build/scripts-3.10 Store the raw script src/obiextract.py -> build/raw_scripts/obiextract.py copying src/obiextract.py -> build/raw_scripts copying and adjusting src/obiextract.py -> build/scripts-3.10 Store the raw script src/obiselect.py -> build/raw_scripts/obiselect.py copying src/obiselect.py -> build/raw_scripts copying and adjusting src/obiselect.py -> build/scripts-3.10 Store the raw script src/obitab.py -> build/raw_scripts/obitab.py copying src/obitab.py -> build/raw_scripts copying and adjusting src/obitab.py -> build/scripts-3.10 Store the raw script src/obiannotate.py -> build/raw_scripts/obiannotate.py copying src/obiannotate.py -> build/raw_scripts copying and adjusting src/obiannotate.py -> build/scripts-3.10 Store the raw script src/obicomplement.py -> build/raw_scripts/obicomplement.py copying src/obicomplement.py -> build/raw_scripts copying and adjusting src/obicomplement.py -> build/scripts-3.10 Store the raw script src/obipr2.py -> build/raw_scripts/obipr2.py copying src/obipr2.py -> build/raw_scripts copying and adjusting src/obipr2.py -> build/scripts-3.10 Store the raw script src/obisplit.py -> build/raw_scripts/obisplit.py copying src/obisplit.py -> build/raw_scripts copying and adjusting src/obisplit.py -> build/scripts-3.10 Store the raw script src/obitaxonomy.py -> build/raw_scripts/obitaxonomy.py copying src/obitaxonomy.py -> build/raw_scripts copying and adjusting src/obitaxonomy.py -> build/scripts-3.10 Store the raw script src/obigrep.py -> build/raw_scripts/obigrep.py copying src/obigrep.py -> build/raw_scripts copying and adjusting src/obigrep.py -> build/scripts-3.10 Store the raw script src/obisilva.py -> build/raw_scripts/obisilva.py copying src/obisilva.py -> build/raw_scripts copying and adjusting src/obisilva.py -> build/scripts-3.10 Store the raw script src/obisubset.py -> build/raw_scripts/obisubset.py copying src/obisubset.py -> build/raw_scripts copying and adjusting src/obisubset.py -> build/scripts-3.10 Store the raw script src/oligotag.py -> build/raw_scripts/oligotag.py copying src/oligotag.py -> build/raw_scripts copying and adjusting src/oligotag.py -> build/scripts-3.10 Store the raw script src/obisort.py -> build/raw_scripts/obisort.py copying src/obisort.py -> build/raw_scripts copying and adjusting src/obisort.py -> build/scripts-3.10 Store the raw script src/obitail.py -> build/raw_scripts/obitail.py copying src/obitail.py -> build/raw_scripts copying and adjusting src/obitail.py -> build/scripts-3.10 Store the raw script src/ali2consensus.py -> build/raw_scripts/ali2consensus.py copying src/ali2consensus.py -> build/raw_scripts copying and adjusting src/ali2consensus.py -> build/scripts-3.10 Store the raw script src/ecodbtaxstat.py -> build/raw_scripts/ecodbtaxstat.py copying src/ecodbtaxstat.py -> build/raw_scripts copying and adjusting src/ecodbtaxstat.py -> build/scripts-3.10 Store the raw script src/ecotaxstat.py -> build/raw_scripts/ecotaxstat.py copying src/ecotaxstat.py -> build/raw_scripts copying and adjusting src/ecotaxstat.py -> build/scripts-3.10 Store the raw script src/obihead.py -> build/raw_scripts/obihead.py copying src/obihead.py -> build/raw_scripts copying and adjusting src/obihead.py -> build/scripts-3.10 Store the raw script src/obijoinpairedend.py -> build/raw_scripts/obijoinpairedend.py copying src/obijoinpairedend.py -> build/raw_scripts copying and adjusting src/obijoinpairedend.py -> build/scripts-3.10 Store the raw script src/obistat.py -> build/raw_scripts/obistat.py copying src/obistat.py -> build/raw_scripts copying and adjusting src/obistat.py -> build/scripts-3.10 Store the raw script src/obiuniq.py -> build/raw_scripts/obiuniq.py copying src/obiuniq.py -> build/raw_scripts copying and adjusting src/obiuniq.py -> build/scripts-3.10 changing mode of build/scripts-3.10/obisample from 644 to 755 changing mode of build/scripts-3.10/ecotag from 644 to 755 changing mode of build/scripts-3.10/ecotaxspecificity from 644 to 755 changing mode of build/scripts-3.10/extractreads from 644 to 755 changing mode of build/scripts-3.10/extractreads2 from 644 to 755 changing mode of build/scripts-3.10/illuminapairedend from 644 to 755 changing mode of build/scripts-3.10/ngsfilter from 644 to 755 changing mode of build/scripts-3.10/obiaddtaxids from 644 to 755 changing mode of build/scripts-3.10/obiclean from 644 to 755 changing mode of build/scripts-3.10/obiconvert from 644 to 755 changing mode of build/scripts-3.10/obicount from 644 to 755 changing mode of build/scripts-3.10/obicut from 644 to 755 changing mode of build/scripts-3.10/obidistribute from 644 to 755 changing mode of build/scripts-3.10/obiextract from 644 to 755 changing mode of build/scripts-3.10/obiselect from 644 to 755 changing mode of build/scripts-3.10/obitab from 644 to 755 changing mode of build/scripts-3.10/obiannotate from 644 to 755 changing mode of build/scripts-3.10/obicomplement from 644 to 755 changing mode of build/scripts-3.10/obipr2 from 644 to 755 changing mode of build/scripts-3.10/obisplit from 644 to 755 changing mode of build/scripts-3.10/obitaxonomy from 644 to 755 changing mode of build/scripts-3.10/obigrep from 644 to 755 changing mode of build/scripts-3.10/obisilva from 644 to 755 changing mode of build/scripts-3.10/obisubset from 644 to 755 changing mode of build/scripts-3.10/oligotag from 644 to 755 changing mode of build/scripts-3.10/obisort from 644 to 755 changing mode of build/scripts-3.10/obitail from 644 to 755 changing mode of build/scripts-3.10/ali2consensus from 644 to 755 changing mode of build/scripts-3.10/ecodbtaxstat from 644 to 755 changing mode of build/scripts-3.10/ecotaxstat from 644 to 755 changing mode of build/scripts-3.10/obihead from 644 to 755 changing mode of build/scripts-3.10/obijoinpairedend from 644 to 755 changing mode of build/scripts-3.10/obistat from 644 to 755 changing mode of build/scripts-3.10/obiuniq from 644 to 755 dh: command-omitted: The call to "dh_auto_test -a -O--buildsystem=pybuild" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild debian/rules override_dh_auto_install make[1]: Entering directory '/build/obitools-c7h8Wk/obitools-1.2.13+dfsg' PYTHONPATH=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython2_3.10_obitools/build \ http_proxy='127.0.0.1:9' \ dh_auto_install I: pybuild base:237: /usr/bin/python3 setup.py install --root /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools ['src/obitools/_obitools.pyx'] ['src/obitools/options/_bioseqfilter.pyx'] ['src/obitools/options/_options.pyx'] ['src/obitools/tools/_solexapairend.pyx'] ['src/obitools/utils/_utils.pyx'] ['src/obitools/fasta/_fasta.pyx'] ['src/obitools/align/_codonnws.pyx'] ['src/obitools/align/_dynamic.pyx'] ['src/obitools/align/_nws.pyx'] ['src/obitools/align/_freeendgap.pyx'] ['src/obitools/align/_gprofilenws.pyx'] @@@@> ['src/obitools/align/_sse.h'] ['src/obitools/align/_upperbond.pyx', 'src/obitools/align/_upperbond.ext.1.c'] ['src/obitools/align/_rassemble.pyx'] ['src/obitools/align/_assemble.pyx'] ['src/obitools/align/_nwsdnabyprot.pyx'] ['src/obitools/align/_profilenws.pyx'] ['src/obitools/align/_freeendgapfm.pyx'] @@@@> ['src/obitools/align/_lcs.h'] ['src/obitools/align/_lcs.pyx', 'src/obitools/align/_lcs.ext.4.c', 'src/obitools/align/_lcs.ext.3.c', 'src/obitools/align/_lcs.ext.2.c', 'src/obitools/align/_lcs.ext.1.c'] ['src/obitools/align/_qsassemble.pyx'] ['src/obitools/align/_qsrassemble.pyx'] ['src/obitools/profile/_profile.pyx'] @@@@> ['src/obitools/word/_readindex.h'] ['src/obitools/word/_readindex.pyx'] ['src/obitools/word/_binary.pyx'] ['src/obitools/format/_format.pyx'] ['src/obitools/format/genericparser/_genericparser.pyx'] ['src/obitools/fastq/_fastq.pyx'] running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( Running obidistutils install process running build Running obidistutils build process running littlebigman building 'littlebigman' program x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/obitools-c7h8Wk/obitools-1.2.13+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -c distutils.ext/src/littlebigman.c -o build/temp.linux-x86_64-3.10/distutils.ext/src/littlebigman.o -msse2 distutils.ext/src/littlebigman.c: In function ‘main’: distutils.ext/src/littlebigman.c:20:5: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 20 | else | ^~~~ distutils.ext/src/littlebigman.c:23:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 23 | return 0; | ^~~~~~ x86_64-linux-gnu-gcc -pthread build/temp.linux-x86_64-3.10/distutils.ext/src/littlebigman.o -o build/temp.linux-x86_64-3.10/littlebigman Your CPU is in mode : b'-DLITTLE_END' running build_py running build_ext obitools._obitools src/obitools/_obitools.pyx ok obitools.options._bioseqfilter src/obitools/options/_bioseqfilter.pyx ok obitools.options._options src/obitools/options/_options.pyx ok obitools.tools._solexapairend src/obitools/tools/_solexapairend.pyx ok obitools.utils._utils src/obitools/utils/_utils.pyx ok obitools.fasta._fasta src/obitools/fasta/_fasta.pyx ok obitools.align._codonnws src/obitools/align/_codonnws.pyx ok obitools.align._dynamic src/obitools/align/_dynamic.pyx ok obitools.align._nws src/obitools/align/_nws.pyx ok obitools.align._freeendgap src/obitools/align/_freeendgap.pyx ok obitools.align._gprofilenws src/obitools/align/_gprofilenws.pyx ok obitools.align._upperbond src/obitools/align/_upperbond.pyx ok obitools.align._upperbond src/obitools/align/_upperbond.ext.1.c ok obitools.align._rassemble src/obitools/align/_rassemble.pyx ok obitools.align._assemble src/obitools/align/_assemble.pyx ok obitools.align._nwsdnabyprot src/obitools/align/_nwsdnabyprot.pyx ok obitools.align._profilenws src/obitools/align/_profilenws.pyx ok obitools.align._freeendgapfm src/obitools/align/_freeendgapfm.pyx ok obitools.align._lcs src/obitools/align/_lcs.pyx ok obitools.align._lcs src/obitools/align/_lcs.ext.4.c ok obitools.align._lcs src/obitools/align/_lcs.ext.3.c ok obitools.align._lcs src/obitools/align/_lcs.ext.2.c ok obitools.align._lcs src/obitools/align/_lcs.ext.1.c ok obitools.align._qsassemble src/obitools/align/_qsassemble.pyx ok obitools.align._qsrassemble src/obitools/align/_qsrassemble.pyx ok obitools.profile._profile src/obitools/profile/_profile.pyx ok obitools.word._readindex src/obitools/word/_readindex.pyx ok obitools.word._binary src/obitools/word/_binary.pyx ok obitools.format._format src/obitools/format/_format.pyx ok obitools.format.genericparser._genericparser src/obitools/format/genericparser/_genericparser.pyx ok obitools.fastq._fastq src/obitools/fastq/_fastq.pyx ok #####> ['src/obitools/_obitools.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/_obitools.c' Cython extension (up-to-date) #####> ['src/obitools/options/_bioseqfilter.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/options/_bioseqfilter.c' Cython extension (up-to-date) #####> ['src/obitools/options/_options.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/options/_options.c' Cython extension (up-to-date) #####> ['src/obitools/tools/_solexapairend.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/tools/_solexapairend.c' Cython extension (up-to-date) #####> ['src/obitools/utils/_utils.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/utils/_utils.c' Cython extension (up-to-date) #####> ['src/obitools/fasta/_fasta.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/fasta/_fasta.c' Cython extension (up-to-date) #####> ['src/obitools/align/_codonnws.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_codonnws.c' Cython extension (up-to-date) #####> ['src/obitools/align/_dynamic.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_dynamic.c' Cython extension (up-to-date) #####> ['src/obitools/align/_nws.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nws.c' Cython extension (up-to-date) #####> ['src/obitools/align/_freeendgap.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_freeendgap.c' Cython extension (up-to-date) #####> ['src/obitools/align/_gprofilenws.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_gprofilenws.c' Cython extension (up-to-date) #####> ['src/obitools/align/_upperbond.pyx', 'src/obitools/align/_upperbond.ext.1.c'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_upperbond.c' Cython extension (up-to-date) #####> ['src/obitools/align/_rassemble.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_rassemble.c' Cython extension (up-to-date) #####> ['src/obitools/align/_assemble.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_assemble.c' Cython extension (up-to-date) #####> ['src/obitools/align/_nwsdnabyprot.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_nwsdnabyprot.c' Cython extension (up-to-date) #####> ['src/obitools/align/_profilenws.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_profilenws.c' Cython extension (up-to-date) #####> ['src/obitools/align/_freeendgapfm.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_freeendgapfm.c' Cython extension (up-to-date) #####> ['src/obitools/align/_lcs.pyx', 'src/obitools/align/_lcs.ext.4.c', 'src/obitools/align/_lcs.ext.3.c', 'src/obitools/align/_lcs.ext.2.c', 'src/obitools/align/_lcs.ext.1.c'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_lcs.c' Cython extension (up-to-date) #####> ['src/obitools/align/_qsassemble.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_qsassemble.c' Cython extension (up-to-date) #####> ['src/obitools/align/_qsrassemble.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/align/_qsrassemble.c' Cython extension (up-to-date) #####> ['src/obitools/profile/_profile.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/profile/_profile.c' Cython extension (up-to-date) #####> ['src/obitools/word/_readindex.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/word/_readindex.c' Cython extension (up-to-date) #####> ['src/obitools/word/_binary.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/word/_binary.c' Cython extension (up-to-date) #####> ['src/obitools/format/_format.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/format/_format.c' Cython extension (up-to-date) #####> ['src/obitools/format/genericparser/_genericparser.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/format/genericparser/_genericparser.c' Cython extension (up-to-date) #####> ['src/obitools/fastq/_fastq.pyx'] skipping 'build/temp.linux-x86_64-3.10/pyrex/obitools/fastq/_fastq.c' Cython extension (up-to-date) running build_scripts running install_lib creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10 creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/version.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/decorator.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/collections.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fast.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/gzip.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/sample.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/solexaPairEnd.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/svg.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/zipfile.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/SVGdraw.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/statistics copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/statistics/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/statistics copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/statistics/hypergeometric.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/statistics copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/statistics/noncentralhypergeo.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/statistics creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree/unrooted.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree/layout.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree/svg.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree/dot.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tree/newick.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options/bioseqcutter.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options/taxonomyfilter.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options/bioseqfilter.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options/bioseqedittag.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options/_bioseqfilter.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/options/_options.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/eutils copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/eutils/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/eutils creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/sequenceencoder copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/sequenceencoder/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/sequenceencoder creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/unit copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/unit/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/unit creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/unit/obitools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/unit/obitools/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/unit/obitools creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/parallel copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/parallel/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/parallel copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/parallel/jobqueue.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/parallel creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tools/solexapairend.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tools/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tools copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tools/_solexapairend.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tools creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/phylogeny copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/phylogeny/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/phylogeny copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/phylogeny/newick.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/phylogeny creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/metabarcoding copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/metabarcoding/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/metabarcoding copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/metabarcoding/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/metabarcoding creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obischemas copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obischemas/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obischemas copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obischemas/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obischemas creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obischemas/kb copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obischemas/kb/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obischemas/kb copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obischemas/kb/extern.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obischemas/kb creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/solexa copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/solexa/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/solexa creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/location copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/location/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/location copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/location/feature.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/location creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fnaqual copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fnaqual/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fnaqual copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fnaqual/fasta.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fnaqual copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fnaqual/quality.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fnaqual creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage/findErrors.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage/readFiles.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage/calcBc.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage/drawBcTree.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/barcodecoverage/writeBcTree.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/tree.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/dag.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/rootedtree.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/layout copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/layout/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/layout copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/layout/radialtree.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/layout creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/algorithms copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/algorithms/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/algorithms copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/algorithms/component.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/algorithms copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/algorithms/clique.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/algorithms copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/graph/algorithms/compact.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/algorithms creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecotag copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecotag/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecotag copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecotag/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecotag creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/goa copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/goa/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/goa copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/goa/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/goa creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/utils copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/utils/iterator.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/utils copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/utils/bioseq.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/utils copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/utils/crc64.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/utils copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/utils/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/utils copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/utils/_utils.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/utils creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fasta copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fasta/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fasta copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fasta/_fasta.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fasta creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/thermo copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/thermo/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/thermo creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/dnahash copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/dnahash/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/dnahash creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/carto copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/carto/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/carto creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obo copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obo/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obo copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obo/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obo creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obo/go copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obo/go/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obo/go copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/obo/go/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obo/go creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/homopolymere.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/ssearch.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_codonnws.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_dynamic.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_nws.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_freeendgap.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_gprofilenws.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_upperbond.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_rassemble.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_assemble.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_nwsdnabyprot.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_profilenws.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_freeendgapfm.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_lcs.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_qsassemble.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/align/_qsrassemble.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecopcr copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecopcr/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecopcr copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecopcr/annotation.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecopcr copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecopcr/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecopcr copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecopcr/sequence.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecopcr copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecopcr/taxonomy.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecopcr creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/profile copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/profile/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/profile copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/profile/_profile.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/profile creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/table copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/table/csv.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/table copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/table/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/table creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/dnaparser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/blastdb copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/blastdb/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/blastdb creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/embl copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/embl/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/embl copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/embl/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/embl creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/genbank copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/genbank/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/genbank copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/genbank/ncbi.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/genbank copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/seqdb/genbank/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/genbank creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tagmatcher copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tagmatcher/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tagmatcher copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tagmatcher/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tagmatcher copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/tagmatcher/parser.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tagmatcher creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/interactive copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/interactive/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/interactive creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/alignment copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/alignment/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/alignment copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/alignment/ace.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/alignment creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/word copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/word/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/word copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/word/predicate.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/word copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/word/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/word copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/word/_readindex.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/word copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/word/_binary.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/word creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/ontology copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/ontology/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/ontology copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/ontology/go_obo.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/ontology creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence/embl.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence/fastq.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence/tagmatcher.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence/genbank.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence/fasta.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence/fnaqual.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/sequence/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/genericparser copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/genericparser/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/genericparser copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/genericparser/_genericparser.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/genericparser copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/format/_format.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/blast copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/blast/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/blast creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/distances copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/distances/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/distances copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/distances/observed.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/distances copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/distances/phylip.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/distances copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/distances/r.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/distances creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fastq copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fastq/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fastq copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/fastq/_fastq.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fastq creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode/options.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode/databases.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode/__init__.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode/ecotag.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode/rawdata.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/ecobarcode/taxonomy.py -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode copying /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/.pybuild/cpython3_3.10_obitools/build/obitools/_obitools.cpython-310-x86_64-linux-gnu.so -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/version.py to version.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/decorator.py to decorator.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/collections.py to collections.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fast.py to fast.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/gzip.py to gzip.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/sample.py to sample.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/solexaPairEnd.py to solexaPairEnd.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/svg.py to svg.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/zipfile.py to zipfile.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/SVGdraw.py to SVGdraw.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/statistics/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/statistics/hypergeometric.py to hypergeometric.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/statistics/noncentralhypergeo.py to noncentralhypergeo.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree/unrooted.py to unrooted.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree/layout.py to layout.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree/svg.py to svg.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree/dot.py to dot.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tree/newick.py to newick.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options/bioseqcutter.py to bioseqcutter.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options/taxonomyfilter.py to taxonomyfilter.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options/bioseqfilter.py to bioseqfilter.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options/bioseqedittag.py to bioseqedittag.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/options/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/eutils/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/sequenceencoder/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/unit/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/unit/obitools/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/parallel/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/parallel/jobqueue.py to jobqueue.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tools/solexapairend.py to solexapairend.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tools/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/phylogeny/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/phylogeny/newick.py to newick.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/metabarcoding/options.py to options.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/metabarcoding/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obischemas/options.py to options.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obischemas/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obischemas/kb/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obischemas/kb/extern.py to extern.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/solexa/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/location/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/location/feature.py to feature.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fnaqual/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fnaqual/fasta.py to fasta.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fnaqual/quality.py to quality.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage/findErrors.py to findErrors.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage/readFiles.py to readFiles.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage/calcBc.py to calcBc.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage/drawBcTree.py to drawBcTree.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/barcodecoverage/writeBcTree.py to writeBcTree.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/tree.py to tree.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/dag.py to dag.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/rootedtree.py to rootedtree.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/layout/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/layout/radialtree.py to radialtree.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/algorithms/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/algorithms/component.py to component.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/algorithms/clique.py to clique.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/graph/algorithms/compact.py to compact.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecotag/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecotag/parser.py to parser.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/goa/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/goa/parser.py to parser.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/utils/iterator.py to iterator.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/utils/bioseq.py to bioseq.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/utils/crc64.py to crc64.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/utils/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fasta/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/thermo/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/dnahash/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/carto/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obo/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obo/parser.py to parser.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obo/go/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/obo/go/parser.py to parser.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align/homopolymere.py to homopolymere.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align/ssearch.py to ssearch.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/align/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecopcr/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecopcr/annotation.py to annotation.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecopcr/options.py to options.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecopcr/sequence.py to sequence.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecopcr/taxonomy.py to taxonomy.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/profile/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/table/csv.py to csv.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/table/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/dnaparser.py to dnaparser.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/blastdb/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/embl/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/embl/parser.py to parser.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/genbank/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/genbank/ncbi.py to ncbi.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/seqdb/genbank/parser.py to parser.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tagmatcher/options.py to options.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tagmatcher/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/tagmatcher/parser.py to parser.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/interactive/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/alignment/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/alignment/ace.py to ace.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/word/options.py to options.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/word/predicate.py to predicate.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/word/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/options.py to options.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/ontology/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/ontology/go_obo.py to go_obo.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence/embl.py to embl.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence/fastq.py to fastq.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence/tagmatcher.py to tagmatcher.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence/genbank.py to genbank.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence/fasta.py to fasta.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence/fnaqual.py to fnaqual.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/sequence/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/format/genericparser/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/blast/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/distances/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/distances/observed.py to observed.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/distances/phylip.py to phylip.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/distances/r.py to r.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/fastq/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode/options.py to options.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode/databases.py to databases.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode/__init__.py to __init__.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode/ecotag.py to ecotag.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode/rawdata.py to rawdata.cpython-310.pyc byte-compiling /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/obitools/ecobarcode/taxonomy.py to taxonomy.cpython-310.pyc running install_egg_info running egg_info creating src/OBITools.egg-info writing src/OBITools.egg-info/PKG-INFO writing dependency_links to src/OBITools.egg-info/dependency_links.txt writing requirements to src/OBITools.egg-info/requires.txt writing top-level names to src/OBITools.egg-info/top_level.txt writing manifest file 'src/OBITools.egg-info/SOURCES.txt' reading manifest file 'src/OBITools.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.pem' under directory 'distutils.ext' writing manifest file 'src/OBITools.egg-info/SOURCES.txt' Copying src/OBITools.egg-info to /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/lib/python3.10/dist-packages/OBITools-1.2.13.egg-info Skipping SOURCES.txt running install_scripts creating /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obisample -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/ecotag -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/ecotaxspecificity -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/extractreads -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/extractreads2 -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/illuminapairedend -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/ngsfilter -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obiaddtaxids -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obiclean -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obiconvert -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obicount -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obicut -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obidistribute -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obiextract -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obiselect -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obitab -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obiannotate -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obicomplement -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obipr2 -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obisplit -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obitaxonomy -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obigrep -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obisilva -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obisubset -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/oligotag -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obisort -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obitail -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/ali2consensus -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/ecodbtaxstat -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/ecotaxstat -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obihead -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obijoinpairedend -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obistat -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin copying build/scripts-3.10/obiuniq -> /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obisample to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/ecotag to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/ecotaxspecificity to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/extractreads to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/extractreads2 to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/illuminapairedend to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/ngsfilter to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obiaddtaxids to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obiclean to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obiconvert to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obicount to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obicut to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obidistribute to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obiextract to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obiselect to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obitab to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obiannotate to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obicomplement to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obipr2 to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obisplit to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obitaxonomy to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obigrep to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obisilva to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obisubset to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/oligotag to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obisort to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obitail to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/ali2consensus to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/ecodbtaxstat to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/ecotaxstat to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obihead to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obijoinpairedend to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obistat to 755 changing mode of /build/obitools-c7h8Wk/obitools-1.2.13+dfsg/debian/obitools/usr/bin/obiuniq to 755 make[1]: Leaving directory '/build/obitools-c7h8Wk/obitools-1.2.13+dfsg' dh_install -a -O--buildsystem=pybuild dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/obitools-c7h8Wk/obitools-1.2.13+dfsg' dh_installman find debian -name "ecoPCR.1*" -delete find debian -name "ecofind.1*" -delete make[1]: Leaving directory '/build/obitools-c7h8Wk/obitools-1.2.13+dfsg' dh_python3 -a -O--buildsystem=pybuild dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package obitools: substitution variable ${sphinxdoc:Depends} used, but is not defined dpkg-gencontrol: warning: package obitools: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: Depends field of package obitools: substitution variable ${sphinxdoc:Depends} used, but is not defined dpkg-gencontrol: warning: package obitools: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'obitools' in '../obitools_1.2.13+dfsg-4+b1_amd64.deb'. dpkg-deb: building package 'obitools-dbgsym' in '../obitools-dbgsym_1.2.13+dfsg-4+b1_amd64.deb'. dpkg-genbuildinfo --build=any -O../obitools_1.2.13+dfsg-4+b1_amd64.buildinfo dpkg-genchanges --build=any -O../obitools_1.2.13+dfsg-4+b1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/obitools-c7h8Wk /tmp/obitools-1.2.13+dfsg-4+b1cmlrml_x I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.bLrjMwYAmf... I: success in 425.6835 seconds md5: obitools-dbgsym_1.2.13+dfsg-4+b1_amd64.deb: OK md5: obitools_1.2.13+dfsg-4+b1_amd64.deb: OK sha1: obitools-dbgsym_1.2.13+dfsg-4+b1_amd64.deb: OK sha1: obitools_1.2.13+dfsg-4+b1_amd64.deb: OK sha256: obitools-dbgsym_1.2.13+dfsg-4+b1_amd64.deb: OK sha256: obitools_1.2.13+dfsg-4+b1_amd64.deb: OK Checksums: OK