Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/n/netcdf4-python/netcdf4-python_1.5.8-1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/netcdf4-python-1.5.8-1ykfnrtno/netcdf4-python_1.5.8-1_amd64.buildinfo Get source package info: netcdf4-python=1.5.8-1 Source URL: http://snapshot.notset.fr/mr/package/netcdf4-python/1.5.8-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.1 autopoint=0.21-4 autotools-dev=20180224.1+nmu1 base-files=12 base-passwd=3.5.52 bash=5.1-6 binutils=2.37.50.20220106-2 binutils-common=2.37.50.20220106-2 binutils-x86-64-linux-gnu=2.37.50.20220106-2 bsdextrautils=2.37.2-6 bsdutils=1:2.37.2-6 build-essential=12.9 bzip2=1.0.8-5 chrpath=0.16-2+b1 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.2.0-14 cython3=0.29.24-2 dash=0.5.11+git20210903+057cd650a4ed-3 debconf=1.5.79 debhelper=13.6 debianutils=5.5-1 dh-autoreconf=20 dh-python=5.20220101 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.1 dpkg-dev=1.21.1 dwz=0.14-1 file=1:5.41-2 findutils=4.8.0-1 g++=4:11.2.0-2 g++-11=11.2.0-14 gcc=4:11.2.0-2 gcc-11=11.2.0-14 gcc-11-base=11.2.0-14 gettext=0.21-4 gettext-base=0.21-4 grep=3.7-1 groff-base=1.22.4-8 gzip=1.10-4 hdf5-helpers=1.10.7+repack-4 hostname=3.23 init-system-helpers=1.61 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libaec-dev=1.0.6-1 libaec0=1.0.6-1 libarchive-zip-perl=1.68-1 libasan6=11.2.0-14 libatomic1=11.2.0-14 libattr1=1:2.5.1-1 libaudit-common=1:3.0.6-1 libaudit1=1:3.0.6-1+b1 libbinutils=2.37.50.20220106-2 libblas3=3.10.0-2 libblkid1=2.37.2-6 libbrotli1=1.0.9-2+b3 libbsd0=0.11.3-1 libbz2-1.0=1.0.8-5 libc-bin=2.33-2 libc-dev-bin=2.33-2 libc6=2.33-2 libc6-dev=2.33-2 libcap-ng0=0.7.9-2.2+b1 libcap2=1:2.44-1 libcc1-0=11.2.0-14 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1 libcrypt1=1:4.4.27-1 libctf-nobfd0=2.37.50.20220106-2 libctf0=2.37.50.20220106-2 libcurl3-gnutls=7.81.0-1 libcurl4=7.81.0-1 libcurl4-openssl-dev=7.81.0-1 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.261 libdebhelper-perl=13.6 libdpkg-perl=1.21.1 libedit2=3.1-20210910-1 libelf1=0.186-1 libexpat1=2.4.3-1 libexpat1-dev=2.4.3-1 libffi8=3.4.2-3 libfile-stripnondeterminism-perl=1.13.0-1 libgcc-11-dev=11.2.0-14 libgcc-s1=11.2.0-14 libgcrypt20=1.9.4-5 libgdbm-compat4=1.22-1 libgdbm6=1.22-1 libgfortran5=11.2.0-14 libgmp10=2:6.2.1+dfsg-3 libgnutls30=3.7.2-5 libgomp1=11.2.0-14 libgpg-error0=1.43-2 libgssapi-krb5-2=1.18.3-7 libhdf5-103-1=1.10.7+repack-4 libhdf5-cpp-103-1=1.10.7+repack-4 libhdf5-dev=1.10.7+repack-4 libhdf5-fortran-102=1.10.7+repack-4 libhdf5-hl-100=1.10.7+repack-4 libhdf5-hl-cpp-100=1.10.7+repack-4 libhdf5-hl-fortran-100=1.10.7+repack-4 libhogweed6=3.7.3-1 libicu67=67.1-7 libidn2-0=2.3.2-2 libisl23=0.24-2 libitm1=11.2.0-14 libjpeg-dev=1:2.1.2-1 libjpeg62-turbo=1:2.1.2-1 libjpeg62-turbo-dev=1:2.1.2-1 libjs-jquery=3.5.1+dfsg+~3.5.5-8 libjs-sphinxdoc=4.3.2-1 libjs-underscore=1.9.1~dfsg-4 libk5crypto3=1.18.3-7 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-7 libkrb5support0=1.18.3-7 liblapack3=3.10.0-2 libldap-2.4-2=2.4.59+dfsg-1 liblsan0=11.2.0-14 liblz4-1=1.9.3-2 liblzma5=5.2.5-2 libmagic-mgc=1:5.41-2 libmagic1=1:5.41-2 libmd0=1.0.4-1 libmount1=2.37.2-6 libmpc3=1.2.1-1 libmpdec3=2.5.1-2 libmpfr6=4.1.0-3 libncursesw6=6.3-2 libnetcdf-dev=1:4.8.1-1 libnetcdf19=1:4.8.1-1 libnettle8=3.7.3-1 libnghttp2-14=1.43.0-1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libp11-kit0=0.24.0-6 libpam-modules=1.4.0-11 libpam-modules-bin=1.4.0-11 libpam-runtime=1.4.0-11 libpam0g=1.4.0-11 libpcre2-8-0=10.39-3 libpcre3=2:8.39-13 libperl5.32=5.32.1-6 libpipeline1=1.5.5-1 libpsl5=0.21.0-1.2 libpython3-all-dev=3.9.8-1 libpython3-dev=3.9.8-1 libpython3-stdlib=3.9.8-1 libpython3.10=3.10.2-1 libpython3.10-dev=3.10.2-1 libpython3.10-minimal=3.10.2-1 libpython3.10-stdlib=3.10.2-1 libpython3.9=3.9.10-1 libpython3.9-dev=3.9.10-1 libpython3.9-minimal=3.9.10-1 libpython3.9-stdlib=3.9.10-1 libquadmath0=11.2.0-14 libreadline8=8.1.2-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.27+dfsg2-3 libsasl2-modules-db=2.1.27+dfsg2-3 libseccomp2=2.5.3-2 libselinux1=3.3-1+b1 libsigsegv2=2.13-1 libsmartcols1=2.37.2-6 libsqlite3-0=3.37.2-2 libssh2-1=1.10.0-2 libssl-dev=1.1.1m-1 libssl1.1=1.1.1m-1 libstdc++-11-dev=11.2.0-14 libstdc++6=11.2.0-14 libsub-override-perl=0.09-2 libsystemd0=250.2-3 libsz2=1.0.6-1 libtasn1-6=4.18.0-4 libtinfo6=6.3-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.6-15 libtsan0=11.2.0-14 libubsan1=11.2.0-14 libuchardet0=0.0.7-1 libudev1=250.2-3 libunistring2=0.9.10-6 libuuid1=2.37.2-6 libxml2=2.9.12+dfsg-5+b1 libzstd1=1.4.8+dfsg-3 linux-libc-dev=5.15.5-2 login=1:4.8.1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.9.4-4 mawk=1.3.4.20200120-2 media-types=4.0.0 ncurses-base=6.3-1 ncurses-bin=6.3-1 netcdf-bin=1:4.8.1-1 patch=2.7.6-7 perl=5.32.1-6 perl-base=5.32.1-6 perl-modules-5.32=5.32.1-6 po-debconf=1.0.21+nmu1 python3=3.9.8-1 python3-all=3.9.8-1 python3-all-dev=3.9.8-1 python3-cftime=1.5.1+ds-1+b1 python3-dev=3.9.8-1 python3-distutils=3.9.10-1 python3-lib2to3=3.9.10-1 python3-minimal=3.9.8-1 python3-numpy=1:1.21.5-1 python3-pkg-resources=59.6.0-1.2 python3-setuptools=59.6.0-1.2 python3.10=3.10.2-1 python3.10-dev=3.10.2-1 python3.10-minimal=3.10.2-1 python3.9=3.9.10-1 python3.9-dev=3.9.10-1 python3.9-minimal=3.9.10-1 readline-common=8.1.2-1 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sysvinit-utils=3.01-1 tar=1.34+dfsg-1 tzdata=2021e-1 util-linux=2.37.2-6 xz-utils=5.2.5-2 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220125T033125Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220125T033125Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220124T155715Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220116T145127Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d netcdf4-python=1.5.8-1 && mkdir -p /build/netcdf4-python-yfADKi && dpkg-source --no-check -x /*.dsc /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8 && chown -R builduser:builduser /build/netcdf4-python-yfADKi" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1642617322" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/netcdf4-python-yfADKi /tmp/netcdf4-python-1.5.8-1ykfnrtno bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220116T145127Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.UTqKYg9DN3 as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.UTqKYg9DN3 Reading package lists... Building dependency tree... util-linux is already the newest version (2.37.2-6). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 135 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220116T145127Z unstable/main amd64 libfakeroot amd64 1.26-1.2 [48.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220116T145127Z unstable/main amd64 fakeroot amd64 1.26-1.2 [87.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 135 kB in 0s (1019 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4681 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.26-1.2_amd64.deb ... Unpacking libfakeroot:amd64 (1.26-1.2) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.26-1.2_amd64.deb ... Unpacking fakeroot (1.26-1.2) ... Setting up libfakeroot:amd64 (1.26-1.2) ... Setting up fakeroot (1.26-1.2) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-2) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220125T033125Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220125T033125Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220124T155715Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220116T145127Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.UTqKYg9DN3 Get:1 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm InRelease [129 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220124T155715Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220116T145127Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm/main Sources [11.8 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm/main amd64 Packages [11.2 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220124T155715Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220124T155715Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220124T155715Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220124T155715Z unstable/main amd64 Packages [12.1 MB] Fetched 35.3 MB in 29s (1219 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.UTqKYg9DN3 I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d netcdf4-python=1.5.8-1 && mkdir -p /build/netcdf4-python-yfADKi && dpkg-source --no-check -x /*.dsc /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8 && chown -R builduser:builduser /build/netcdf4-python-yfADKi"' exec /tmp/mmdebstrap.UTqKYg9DN3 Reading package lists... NOTICE: 'netcdf4-python' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debian-gis-team/netcdf4-python.git Please use: git clone https://salsa.debian.org/debian-gis-team/netcdf4-python.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 805 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm/main netcdf4-python 1.5.8-1 (dsc) [2141 B] Get:2 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm/main netcdf4-python 1.5.8-1 (tar) [798 kB] Get:3 http://snapshot.notset.fr/archive/debian/20220125T033125Z bookworm/main netcdf4-python 1.5.8-1 (diff) [5332 B] Fetched 805 kB in 1s (1156 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'netcdf4-python_1.5.8-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting netcdf4-python in /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8 dpkg-source: info: unpacking netcdf4-python_1.5.8.orig.tar.gz dpkg-source: info: unpacking netcdf4-python_1.5.8-1.debian.tar.xz I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1642617322" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.UTqKYg9DN3 dpkg-buildpackage: info: source package netcdf4-python dpkg-buildpackage: info: source version 1.5.8-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Bas Couwenberg dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean \ --with python3 \ --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:237: python3.10 setup.py clean reading from setup.cfg... using nc-config... checking /usr/include ... hdf5 headers not found in /usr/include checking /usr/include/hdf5/serial ... HDF5 library version: 1.10.7 headers found in /usr/include/hdf5/serial using netcdf library version b'4.8.1' running clean removing '/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.10/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.10' does not exist -- can't clean it I: pybuild base:237: python3.9 setup.py clean reading from setup.cfg... using nc-config... checking /usr/include ... hdf5 headers not found in /usr/include checking /usr/include/hdf5/serial ... HDF5 library version: 1.10.7 headers found in /usr/include/hdf5/serial using netcdf library version b'4.8.1' running clean removing '/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.9/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules build-arch dh build-arch \ --with python3 \ --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:237: python3.10 setup.py config reading from setup.cfg... using nc-config... checking /usr/include ... hdf5 headers not found in /usr/include checking /usr/include/hdf5/serial ... HDF5 library version: 1.10.7 headers found in /usr/include/hdf5/serial using netcdf library version b'4.8.1' using Cython to compile netCDF4.pyx... netcdf lib has group rename capability netcdf lib has nc_inq_path function netcdf lib has nc_inq_format_extended function netcdf lib has nc_open_mem function netcdf lib has nc_create_mem function netcdf lib has cdf-5 format capability netcdf lib does not have netcdf4 parallel functions netcdf lib does not have pnetcdf parallel functions running config I: pybuild base:237: python3.9 setup.py config reading from setup.cfg... using nc-config... checking /usr/include ... hdf5 headers not found in /usr/include checking /usr/include/hdf5/serial ... HDF5 library version: 1.10.7 headers found in /usr/include/hdf5/serial using netcdf library version b'4.8.1' using Cython to compile netCDF4.pyx... netcdf lib has group rename capability netcdf lib has nc_inq_path function netcdf lib has nc_inq_format_extended function netcdf lib has nc_open_mem function netcdf lib has nc_create_mem function netcdf lib has cdf-5 format capability netcdf lib does not have netcdf4 parallel functions netcdf lib does not have pnetcdf parallel functions running config dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:237: /usr/bin/python3.10 setup.py build reading from setup.cfg... using nc-config... checking /usr/include ... hdf5 headers not found in /usr/include checking /usr/include/hdf5/serial ... HDF5 library version: 1.10.7 headers found in /usr/include/hdf5/serial using netcdf library version b'4.8.1' using Cython to compile netCDF4.pyx... netcdf lib has group rename capability netcdf lib has nc_inq_path function netcdf lib has nc_inq_format_extended function netcdf lib has nc_open_mem function netcdf lib has nc_create_mem function netcdf lib has cdf-5 format capability netcdf lib does not have netcdf4 parallel functions netcdf lib does not have pnetcdf parallel functions running build running build_py creating /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.10/build/netCDF4 copying src/netCDF4/__init__.py -> /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.10/build/netCDF4 copying src/netCDF4/utils.py -> /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.10/build/netCDF4 running build_ext cythoning src/netCDF4/_netCDF4.pyx to src/netCDF4/_netCDF4.c /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/src/netCDF4/_netCDF4.pyx tree = Parsing.p_module(s, pxd, full_module_name) building 'netCDF4._netCDF4' extension creating build creating build/temp.linux-x86_64-3.10 creating build/temp.linux-x86_64-3.10/src creating build/temp.linux-x86_64-3.10/src/netCDF4 x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include -I/usr/include/hdf5/serial -I/usr/lib/python3/dist-packages/numpy/core/include -Iinclude -I/usr/include/python3.10 -c src/netCDF4/_netCDF4.c -o build/temp.linux-x86_64-3.10/src/netCDF4/_netCDF4.o src/netCDF4/_netCDF4.c: In function ‘__pyx_pf_7netCDF4_8_netCDF4_7_MemBuf_4__dealloc__’: src/netCDF4/_netCDF4.c:4610:20: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 4610 | free(__pyx_v_self->memory); | ~~~~~~~~~~~~^~~~~~~~ In file included from /usr/include/python3.10/Python.h:34, from src/netCDF4/_netCDF4.c:6: /usr/include/stdlib.h:565:25: note: expected ‘void *’ but argument is of type ‘const void *’ 565 | extern void free (void *__ptr) __THROW; | ~~~~~~^~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__set_att’: src/netCDF4/_netCDF4.c:8666:97: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types] 8666 | __pyx_v_ierr = nc_put_att_string(__pyx_t_6, __pyx_v_varid, __pyx_v_attname, __pyx_t_10, __pyx_v_string_ptrs); | ^~~~~~~~~~~~~~~~~~~ | | | char ** In file included from src/netCDF4/_netCDF4.c:623: /usr/include/netcdf.h:1052:44: note: expected ‘const char **’ but argument is of type ‘char **’ 1052 | size_t len, const char **op); | ~~~~~~~~~~~~~^~ src/netCDF4/_netCDF4.c:9107:94: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types] 9107 | __pyx_v_ierr = nc_put_att_string(__pyx_t_14, __pyx_v_varid, __pyx_v_attname, 1, (&__pyx_v_datstring)); | ~^~~~~~~~~~~~~~~~~~~ | | | char ** In file included from src/netCDF4/_netCDF4.c:623: /usr/include/netcdf.h:1052:44: note: expected ‘const char **’ but argument is of type ‘char **’ 1052 | size_t len, const char **op); | ~~~~~~~~~~~~~^~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_compound’: src/netCDF4/_netCDF4.c:63253:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63253 | for (__pyx_v_nf = 0; __pyx_v_nf < __pyx_t_4; __pyx_v_nf++) { | ^ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_enum’: src/netCDF4/_netCDF4.c:67097:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 67097 | for (__pyx_v_nmem = 0; __pyx_v_nmem < __pyx_t_11; __pyx_v_nmem++) { | ^ src/netCDF4/_netCDF4.c: In function ‘__pyx_pymod_exec__netCDF4’: src/netCDF4/_netCDF4.c:86852:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 86852 | import_array(); | ^~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__get_types’: src/netCDF4/_netCDF4.c:9447:12: warning: ‘__pyx_v_typeids’ may be used uninitialized in this function [-Wmaybe-uninitialized] 9447 | nc_type *__pyx_v_typeids; | ^~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_pw_7netCDF4_8_netCDF4_7Dataset_1__init__’: src/netCDF4/_netCDF4.c:534:40: warning: ‘__pyx_v_ierr’ may be used uninitialized in this function [-Wmaybe-uninitialized] 534 | #define PyInt_FromLong PyLong_FromLong | ^~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c:13741:7: note: ‘__pyx_v_ierr’ was declared here 13741 | int __pyx_v_ierr; | ^~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_pw_7netCDF4_8_netCDF4_8Variable_1__init__’: src/netCDF4/_netCDF4.c:33603:22: warning: ‘__pyx_v_dimids’ may be used uninitialized in this function [-Wmaybe-uninitialized] 33603 | __pyx_v_ierr = nc_def_var(__pyx_v_self->_grpid, __pyx_v_varname, __pyx_v_xtype, __pyx_v_ndims, __pyx_v_dimids, (&__pyx_v_self->_varid)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c:32205:8: note: ‘__pyx_v_dimids’ was declared here 32205 | int *__pyx_v_dimids; | ^~~~~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/src/netCDF4/_netCDF4.o -L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--enable-new-dtags,-R/usr/lib/x86_64-linux-gnu/hdf5/serial -lnetcdf -o /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.10/build/netCDF4/_netCDF4.cpython-310-x86_64-linux-gnu.so I: pybuild base:237: /usr/bin/python3 setup.py build reading from setup.cfg... using nc-config... checking /usr/include ... hdf5 headers not found in /usr/include checking /usr/include/hdf5/serial ... HDF5 library version: 1.10.7 headers found in /usr/include/hdf5/serial using netcdf library version b'4.8.1' using Cython to compile netCDF4.pyx... netcdf lib has group rename capability netcdf lib has nc_inq_path function netcdf lib has nc_inq_format_extended function netcdf lib has nc_open_mem function netcdf lib has nc_create_mem function netcdf lib has cdf-5 format capability netcdf lib does not have netcdf4 parallel functions netcdf lib does not have pnetcdf parallel functions running build running build_py creating /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.9/build/netCDF4 copying src/netCDF4/__init__.py -> /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.9/build/netCDF4 copying src/netCDF4/utils.py -> /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.9/build/netCDF4 running build_ext cythoning src/netCDF4/_netCDF4.pyx to src/netCDF4/_netCDF4.c /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/src/netCDF4/_netCDF4.pyx tree = Parsing.p_module(s, pxd, full_module_name) building 'netCDF4._netCDF4' extension creating build/temp.linux-x86_64-3.9 creating build/temp.linux-x86_64-3.9/src creating build/temp.linux-x86_64-3.9/src/netCDF4 x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include -I/usr/include/hdf5/serial -I/usr/lib/python3/dist-packages/numpy/core/include -Iinclude -I/usr/include/python3.9 -c src/netCDF4/_netCDF4.c -o build/temp.linux-x86_64-3.9/src/netCDF4/_netCDF4.o src/netCDF4/_netCDF4.c: In function ‘__pyx_pf_7netCDF4_8_netCDF4_7_MemBuf_4__dealloc__’: src/netCDF4/_netCDF4.c:4610:20: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 4610 | free(__pyx_v_self->memory); | ~~~~~~~~~~~~^~~~~~~~ In file included from /usr/include/python3.9/Python.h:34, from src/netCDF4/_netCDF4.c:6: /usr/include/stdlib.h:565:25: note: expected ‘void *’ but argument is of type ‘const void *’ 565 | extern void free (void *__ptr) __THROW; | ~~~~~~^~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__set_att’: src/netCDF4/_netCDF4.c:8666:97: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types] 8666 | __pyx_v_ierr = nc_put_att_string(__pyx_t_6, __pyx_v_varid, __pyx_v_attname, __pyx_t_10, __pyx_v_string_ptrs); | ^~~~~~~~~~~~~~~~~~~ | | | char ** In file included from src/netCDF4/_netCDF4.c:623: /usr/include/netcdf.h:1052:44: note: expected ‘const char **’ but argument is of type ‘char **’ 1052 | size_t len, const char **op); | ~~~~~~~~~~~~~^~ src/netCDF4/_netCDF4.c:9107:94: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types] 9107 | __pyx_v_ierr = nc_put_att_string(__pyx_t_14, __pyx_v_varid, __pyx_v_attname, 1, (&__pyx_v_datstring)); | ~^~~~~~~~~~~~~~~~~~~ | | | char ** In file included from src/netCDF4/_netCDF4.c:623: /usr/include/netcdf.h:1052:44: note: expected ‘const char **’ but argument is of type ‘char **’ 1052 | size_t len, const char **op); | ~~~~~~~~~~~~~^~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_compound’: src/netCDF4/_netCDF4.c:63253:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63253 | for (__pyx_v_nf = 0; __pyx_v_nf < __pyx_t_4; __pyx_v_nf++) { | ^ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_enum’: src/netCDF4/_netCDF4.c:67097:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 67097 | for (__pyx_v_nmem = 0; __pyx_v_nmem < __pyx_t_11; __pyx_v_nmem++) { | ^ src/netCDF4/_netCDF4.c: In function ‘__pyx_pymod_exec__netCDF4’: src/netCDF4/_netCDF4.c:86852:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 86852 | import_array(); | ^~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__get_types’: src/netCDF4/_netCDF4.c:9447:12: warning: ‘__pyx_v_typeids’ may be used uninitialized in this function [-Wmaybe-uninitialized] 9447 | nc_type *__pyx_v_typeids; | ^~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_pw_7netCDF4_8_netCDF4_8Variable_1__init__’: src/netCDF4/_netCDF4.c:33603:22: warning: ‘__pyx_v_dimids’ may be used uninitialized in this function [-Wmaybe-uninitialized] 33603 | __pyx_v_ierr = nc_def_var(__pyx_v_self->_grpid, __pyx_v_varname, __pyx_v_xtype, __pyx_v_ndims, __pyx_v_dimids, (&__pyx_v_self->_varid)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c:32205:8: note: ‘__pyx_v_dimids’ was declared here 32205 | int *__pyx_v_dimids; | ^~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_pw_7netCDF4_8_netCDF4_7Dataset_1__init__’: src/netCDF4/_netCDF4.c:534:40: warning: ‘__pyx_v_ierr’ may be used uninitialized in this function [-Wmaybe-uninitialized] 534 | #define PyInt_FromLong PyLong_FromLong | ^~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c:13741:7: note: ‘__pyx_v_ierr’ was declared here 13741 | int __pyx_v_ierr; | ^~~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/src/netCDF4/_netCDF4.o -L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--enable-new-dtags,-R/usr/lib/x86_64-linux-gnu/hdf5/serial -lnetcdf -o /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.9/build/netCDF4/_netCDF4.cpython-39-x86_64-linux-gnu.so debian/rules override_dh_auto_test make[1]: Entering directory '/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8' PYBUILD_SYSTEM=custom \ PYBUILD_TEST_ARGS="cd test && NO_NET=1 {interpreter} run_all.py" dh_auto_test || echo "Ignoring test failures" make[1]: Leaving directory '/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch \ --with python3 \ --buildsystem=pybuild dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild debian/rules override_dh_auto_install make[1]: Entering directory '/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8' dh_auto_install I: pybuild base:237: /usr/bin/python3.10 setup.py install --root /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4 reading from setup.cfg... using nc-config... checking /usr/include ... hdf5 headers not found in /usr/include checking /usr/include/hdf5/serial ... HDF5 library version: 1.10.7 headers found in /usr/include/hdf5/serial using netcdf library version b'4.8.1' using Cython to compile netCDF4.pyx... netcdf lib has group rename capability netcdf lib has nc_inq_path function netcdf lib has nc_inq_format_extended function netcdf lib has nc_open_mem function netcdf lib has nc_create_mem function netcdf lib has cdf-5 format capability netcdf lib does not have netcdf4 parallel functions netcdf lib does not have pnetcdf parallel functions running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running build_ext cythoning src/netCDF4/_netCDF4.pyx to src/netCDF4/_netCDF4.c /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/src/netCDF4/_netCDF4.pyx tree = Parsing.p_module(s, pxd, full_module_name) building 'netCDF4._netCDF4' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include -I/usr/include/hdf5/serial -I/usr/lib/python3/dist-packages/numpy/core/include -Iinclude -I/usr/include/python3.10 -c src/netCDF4/_netCDF4.c -o build/temp.linux-x86_64-3.10/src/netCDF4/_netCDF4.o src/netCDF4/_netCDF4.c: In function ‘__pyx_pf_7netCDF4_8_netCDF4_7_MemBuf_4__dealloc__’: src/netCDF4/_netCDF4.c:4610:20: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 4610 | free(__pyx_v_self->memory); | ~~~~~~~~~~~~^~~~~~~~ In file included from /usr/include/python3.10/Python.h:34, from src/netCDF4/_netCDF4.c:6: /usr/include/stdlib.h:565:25: note: expected ‘void *’ but argument is of type ‘const void *’ 565 | extern void free (void *__ptr) __THROW; | ~~~~~~^~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__set_att’: src/netCDF4/_netCDF4.c:8666:97: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types] 8666 | __pyx_v_ierr = nc_put_att_string(__pyx_t_6, __pyx_v_varid, __pyx_v_attname, __pyx_t_10, __pyx_v_string_ptrs); | ^~~~~~~~~~~~~~~~~~~ | | | char ** In file included from src/netCDF4/_netCDF4.c:623: /usr/include/netcdf.h:1052:44: note: expected ‘const char **’ but argument is of type ‘char **’ 1052 | size_t len, const char **op); | ~~~~~~~~~~~~~^~ src/netCDF4/_netCDF4.c:9107:94: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types] 9107 | __pyx_v_ierr = nc_put_att_string(__pyx_t_14, __pyx_v_varid, __pyx_v_attname, 1, (&__pyx_v_datstring)); | ~^~~~~~~~~~~~~~~~~~~ | | | char ** In file included from src/netCDF4/_netCDF4.c:623: /usr/include/netcdf.h:1052:44: note: expected ‘const char **’ but argument is of type ‘char **’ 1052 | size_t len, const char **op); | ~~~~~~~~~~~~~^~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_compound’: src/netCDF4/_netCDF4.c:63253:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63253 | for (__pyx_v_nf = 0; __pyx_v_nf < __pyx_t_4; __pyx_v_nf++) { | ^ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_enum’: src/netCDF4/_netCDF4.c:67097:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 67097 | for (__pyx_v_nmem = 0; __pyx_v_nmem < __pyx_t_11; __pyx_v_nmem++) { | ^ src/netCDF4/_netCDF4.c: In function ‘__pyx_pymod_exec__netCDF4’: src/netCDF4/_netCDF4.c:86852:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 86852 | import_array(); | ^~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__get_types’: src/netCDF4/_netCDF4.c:9447:12: warning: ‘__pyx_v_typeids’ may be used uninitialized in this function [-Wmaybe-uninitialized] 9447 | nc_type *__pyx_v_typeids; | ^~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_pw_7netCDF4_8_netCDF4_7Dataset_1__init__’: src/netCDF4/_netCDF4.c:534:40: warning: ‘__pyx_v_ierr’ may be used uninitialized in this function [-Wmaybe-uninitialized] 534 | #define PyInt_FromLong PyLong_FromLong | ^~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c:13741:7: note: ‘__pyx_v_ierr’ was declared here 13741 | int __pyx_v_ierr; | ^~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_pw_7netCDF4_8_netCDF4_8Variable_1__init__’: src/netCDF4/_netCDF4.c:33603:22: warning: ‘__pyx_v_dimids’ may be used uninitialized in this function [-Wmaybe-uninitialized] 33603 | __pyx_v_ierr = nc_def_var(__pyx_v_self->_grpid, __pyx_v_varname, __pyx_v_xtype, __pyx_v_ndims, __pyx_v_dimids, (&__pyx_v_self->_varid)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c:32205:8: note: ‘__pyx_v_dimids’ was declared here 32205 | int *__pyx_v_dimids; | ^~~~~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.10/src/netCDF4/_netCDF4.o -L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--enable-new-dtags,-R/usr/lib/x86_64-linux-gnu/hdf5/serial -lnetcdf -o /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.10/build/netCDF4/_netCDF4.cpython-310-x86_64-linux-gnu.so running install_lib creating /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr creating /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib creating /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.10 creating /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.10/dist-packages creating /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.10/dist-packages/netCDF4 copying /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.10/build/netCDF4/__init__.py -> /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.10/dist-packages/netCDF4 copying /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.10/build/netCDF4/utils.py -> /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.10/dist-packages/netCDF4 copying /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.10/build/netCDF4/_netCDF4.cpython-310-x86_64-linux-gnu.so -> /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.10/dist-packages/netCDF4 byte-compiling /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.10/dist-packages/netCDF4/__init__.py to __init__.cpython-310.pyc byte-compiling /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.10/dist-packages/netCDF4/utils.py to utils.cpython-310.pyc running install_egg_info running egg_info creating src/netCDF4.egg-info writing src/netCDF4.egg-info/PKG-INFO writing dependency_links to src/netCDF4.egg-info/dependency_links.txt writing entry points to src/netCDF4.egg-info/entry_points.txt writing requirements to src/netCDF4.egg-info/requires.txt writing top-level names to src/netCDF4.egg-info/top_level.txt writing manifest file 'src/netCDF4.egg-info/SOURCES.txt' reading manifest file 'src/netCDF4.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'src/netCDF4.egg-info/SOURCES.txt' Copying src/netCDF4.egg-info to /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.10/dist-packages/netCDF4-1.5.8.egg-info Skipping SOURCES.txt running install_scripts Installing nc3tonc4 script to /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/bin Installing nc4tonc3 script to /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/bin Installing ncinfo script to /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/bin I: pybuild base:237: /usr/bin/python3 setup.py install --root /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4 reading from setup.cfg... using nc-config... checking /usr/include ... hdf5 headers not found in /usr/include checking /usr/include/hdf5/serial ... HDF5 library version: 1.10.7 headers found in /usr/include/hdf5/serial using netcdf library version b'4.8.1' using Cython to compile netCDF4.pyx... netcdf lib has group rename capability netcdf lib has nc_inq_path function netcdf lib has nc_inq_format_extended function netcdf lib has nc_open_mem function netcdf lib has nc_create_mem function netcdf lib has cdf-5 format capability netcdf lib does not have netcdf4 parallel functions netcdf lib does not have pnetcdf parallel functions running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running build_ext cythoning src/netCDF4/_netCDF4.pyx to src/netCDF4/_netCDF4.c /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/src/netCDF4/_netCDF4.pyx tree = Parsing.p_module(s, pxd, full_module_name) building 'netCDF4._netCDF4' extension x86_64-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include -I/usr/include/hdf5/serial -I/usr/lib/python3/dist-packages/numpy/core/include -Iinclude -I/usr/include/python3.9 -c src/netCDF4/_netCDF4.c -o build/temp.linux-x86_64-3.9/src/netCDF4/_netCDF4.o src/netCDF4/_netCDF4.c: In function ‘__pyx_pf_7netCDF4_8_netCDF4_7_MemBuf_4__dealloc__’: src/netCDF4/_netCDF4.c:4610:20: warning: passing argument 1 of ‘free’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 4610 | free(__pyx_v_self->memory); | ~~~~~~~~~~~~^~~~~~~~ In file included from /usr/include/python3.9/Python.h:34, from src/netCDF4/_netCDF4.c:6: /usr/include/stdlib.h:565:25: note: expected ‘void *’ but argument is of type ‘const void *’ 565 | extern void free (void *__ptr) __THROW; | ~~~~~~^~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__set_att’: src/netCDF4/_netCDF4.c:8666:97: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types] 8666 | __pyx_v_ierr = nc_put_att_string(__pyx_t_6, __pyx_v_varid, __pyx_v_attname, __pyx_t_10, __pyx_v_string_ptrs); | ^~~~~~~~~~~~~~~~~~~ | | | char ** In file included from src/netCDF4/_netCDF4.c:623: /usr/include/netcdf.h:1052:44: note: expected ‘const char **’ but argument is of type ‘char **’ 1052 | size_t len, const char **op); | ~~~~~~~~~~~~~^~ src/netCDF4/_netCDF4.c:9107:94: warning: passing argument 5 of ‘nc_put_att_string’ from incompatible pointer type [-Wincompatible-pointer-types] 9107 | __pyx_v_ierr = nc_put_att_string(__pyx_t_14, __pyx_v_varid, __pyx_v_attname, 1, (&__pyx_v_datstring)); | ~^~~~~~~~~~~~~~~~~~~ | | | char ** In file included from src/netCDF4/_netCDF4.c:623: /usr/include/netcdf.h:1052:44: note: expected ‘const char **’ but argument is of type ‘char **’ 1052 | size_t len, const char **op); | ~~~~~~~~~~~~~^~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_compound’: src/netCDF4/_netCDF4.c:63253:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63253 | for (__pyx_v_nf = 0; __pyx_v_nf < __pyx_t_4; __pyx_v_nf++) { | ^ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__read_enum’: src/netCDF4/_netCDF4.c:67097:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 67097 | for (__pyx_v_nmem = 0; __pyx_v_nmem < __pyx_t_11; __pyx_v_nmem++) { | ^ src/netCDF4/_netCDF4.c: In function ‘__pyx_pymod_exec__netCDF4’: src/netCDF4/_netCDF4.c:86852:3: warning: returning ‘void *’ from a function with return type ‘int’ makes integer from pointer without a cast [-Wint-conversion] 86852 | import_array(); | ^~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_f_7netCDF4_8_netCDF4__get_types’: src/netCDF4/_netCDF4.c:9447:12: warning: ‘__pyx_v_typeids’ may be used uninitialized in this function [-Wmaybe-uninitialized] 9447 | nc_type *__pyx_v_typeids; | ^~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_pw_7netCDF4_8_netCDF4_8Variable_1__init__’: src/netCDF4/_netCDF4.c:33603:22: warning: ‘__pyx_v_dimids’ may be used uninitialized in this function [-Wmaybe-uninitialized] 33603 | __pyx_v_ierr = nc_def_var(__pyx_v_self->_grpid, __pyx_v_varname, __pyx_v_xtype, __pyx_v_ndims, __pyx_v_dimids, (&__pyx_v_self->_varid)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c:32205:8: note: ‘__pyx_v_dimids’ was declared here 32205 | int *__pyx_v_dimids; | ^~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c: In function ‘__pyx_pw_7netCDF4_8_netCDF4_7Dataset_1__init__’: src/netCDF4/_netCDF4.c:534:40: warning: ‘__pyx_v_ierr’ may be used uninitialized in this function [-Wmaybe-uninitialized] 534 | #define PyInt_FromLong PyLong_FromLong | ^~~~~~~~~~~~~~~ src/netCDF4/_netCDF4.c:13741:7: note: ‘__pyx_v_ierr’ was declared here 13741 | int __pyx_v_ierr; | ^~~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/src/netCDF4/_netCDF4.o -L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,--enable-new-dtags,-R/usr/lib/x86_64-linux-gnu/hdf5/serial -lnetcdf -o /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.9/build/netCDF4/_netCDF4.cpython-39-x86_64-linux-gnu.so running install_lib creating /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.9 creating /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.9/dist-packages creating /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.9/dist-packages/netCDF4 copying /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.9/build/netCDF4/__init__.py -> /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.9/dist-packages/netCDF4 copying /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.9/build/netCDF4/utils.py -> /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.9/dist-packages/netCDF4 copying /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/.pybuild/cpython3_3.9/build/netCDF4/_netCDF4.cpython-39-x86_64-linux-gnu.so -> /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.9/dist-packages/netCDF4 byte-compiling /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.9/dist-packages/netCDF4/__init__.py to __init__.cpython-39.pyc byte-compiling /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.9/dist-packages/netCDF4/utils.py to utils.cpython-39.pyc running install_egg_info running egg_info writing src/netCDF4.egg-info/PKG-INFO writing dependency_links to src/netCDF4.egg-info/dependency_links.txt writing entry points to src/netCDF4.egg-info/entry_points.txt writing requirements to src/netCDF4.egg-info/requires.txt writing top-level names to src/netCDF4.egg-info/top_level.txt reading manifest file 'src/netCDF4.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'src/netCDF4.egg-info/SOURCES.txt' Copying src/netCDF4.egg-info to /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/lib/python3.9/dist-packages/netCDF4-1.5.8.egg-info Skipping SOURCES.txt running install_scripts Installing nc3tonc4 script to /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/bin Installing nc4tonc3 script to /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/bin Installing ncinfo script to /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/python3-netcdf4/usr/bin # removing embedded rpath in libraries find /build/netcdf4-python-yfADKi/netcdf4-python-1.5.8/debian/*/usr/lib -name "*.so*" -type f -exec chrpath --delete {} \; make[1]: Leaving directory '/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8' dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_installexamples -a -O--buildsystem=pybuild dh_installman -a -O--buildsystem=pybuild debian/rules override_dh_python3 make[1]: Entering directory '/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8' dh_python3 -ppython3-netcdf4 dh_numpy3 -ppython3-netcdf4 make[1]: Leaving directory '/build/netcdf4-python-yfADKi/netcdf4-python-1.5.8' dh_installinit -a -O--buildsystem=pybuild dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: package python3-netcdf4: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-netcdf4: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-netcdf4: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-netcdf4: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'python3-netcdf4-dbgsym' in '../python3-netcdf4-dbgsym_1.5.8-1_amd64.deb'. dpkg-deb: building package 'python3-netcdf4' in '../python3-netcdf4_1.5.8-1_amd64.deb'. dpkg-genbuildinfo --build=any -O../netcdf4-python_1.5.8-1_amd64.buildinfo dpkg-genchanges --build=any -O../netcdf4-python_1.5.8-1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/netcdf4-python-yfADKi /tmp/netcdf4-python-1.5.8-1ykfnrtno I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.UTqKYg9DN3... I: success in 558.1362 seconds md5: python3-netcdf4-dbgsym_1.5.8-1_amd64.deb: OK md5: python3-netcdf4_1.5.8-1_amd64.deb: OK sha1: python3-netcdf4-dbgsym_1.5.8-1_amd64.deb: OK sha1: python3-netcdf4_1.5.8-1_amd64.deb: OK sha256: python3-netcdf4-dbgsym_1.5.8-1_amd64.deb: OK sha256: python3-netcdf4_1.5.8-1_amd64.deb: OK Checksums: OK