Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/m/mirtop/mirtop_0.4.23-2_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/mirtop-0.4.23-26m0_6cx9/mirtop_0.4.23-2_all.buildinfo Get source package info: mirtop=0.4.23-2 Source URL: http://snapshot.notset.fr/mr/package/mirtop/0.4.23-2/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-14 automake=1:1.16.3-2 autopoint=0.21-4 autotools-dev=20180224.1+nmu1 base-files=11.1 base-passwd=3.5.50 bash=5.1-3 binutils=2.35.2-2 binutils-common=2.35.2-2 binutils-x86-64-linux-gnu=2.35.2-2 bsdextrautils=2.36.1-7 bsdutils=1:2.36.1-7 build-essential=12.9 bzip2=1.0.8-4 ca-certificates=20210119 coreutils=8.32-4+b1 cpp=4:10.2.1-1 cpp-10=10.2.1-6 dash=0.5.11+git20210120+802ebd4-1 debconf=1.5.77 debhelper=13.3.4 debianutils=4.11.2 dh-autoreconf=20 dh-python=4.20201102+nmu1 dh-strip-nondeterminism=1.12.0-1 diffutils=1:3.7-5 docutils-common=0.16+dfsg-4 dpkg=1.20.9 dpkg-dev=1.20.9 dwz=0.14-1 file=1:5.39-3 findutils=4.8.0-1 g++=4:10.2.1-1 g++-10=10.2.1-6 gcc=4:10.2.1-1 gcc-10=10.2.1-6 gcc-10-base=10.2.1-6 gettext=0.21-4 gettext-base=0.21-4 grep=3.6-1 groff-base=1.22.4-6 gzip=1.10-4 hostname=3.23 init-system-helpers=1.60 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-10 libarchive-zip-perl=1.68-1 libasan6=10.2.1-6 libatomic1=10.2.1-6 libattr1=1:2.4.48-6 libaudit-common=1:3.0-2 libaudit1=1:3.0-2 libbinutils=2.35.2-2 libblas3=3.9.0-3 libblkid1=2.36.1-7 libbrotli1=1.0.9-2+b2 libbsd0=0.11.3-1 libbz2-1.0=1.0.8-4 libc-bin=2.31-12 libc-dev-bin=2.31-12 libc6=2.31-12 libc6-dev=2.31-12 libcap-ng0=0.7.9-2.2+b1 libcc1-0=10.2.1-6 libcom-err2=1.46.2-2 libcrypt-dev=1:4.4.18-4 libcrypt1=1:4.4.18-4 libctf-nobfd0=2.35.2-2 libctf0=2.35.2-2 libcurl3-gnutls=7.74.0-1.3 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.259 libdebhelper-perl=13.3.4 libdeflate0=1.7-1 libdpkg-perl=1.20.9 libelf1=0.183-3 libexpat1=2.2.10-2 libffi7=3.3-6 libfile-stripnondeterminism-perl=1.12.0-1 libfreetype6=2.10.4+dfsg-1 libgcc-10-dev=10.2.1-6 libgcc-s1=10.2.1-6 libgcrypt20=1.8.7-6 libgdbm-compat4=1.19-2 libgdbm6=1.19-2 libgfortran5=10.2.1-6 libgmp10=2:6.2.1+dfsg-1 libgnutls30=3.7.1-5 libgomp1=10.2.1-6 libgpg-error0=1.38-2 libgssapi-krb5-2=1.18.3-5 libhogweed6=3.7.3-1 libhts3=1.11-4 libicu67=67.1-6 libidn2-0=2.3.0-5 libimagequant0=2.12.2-1.1 libisl23=0.23-1 libitm1=10.2.1-6 libjbig0=2.1-3.1+b2 libjpeg62-turbo=1:2.0.6-4 libjs-jquery=3.5.1+dfsg+~3.5.5-7 libjs-sphinxdoc=3.4.3-2 libjs-underscore=1.9.1~dfsg-3 libk5crypto3=1.18.3-5 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-5 libkrb5support0=1.18.3-5 liblapack3=3.9.0-3 liblcms2-2=2.12~rc1-2 libldap-2.4-2=2.4.57+dfsg-3 liblsan0=10.2.1-6 liblz4-1=1.9.3-2 liblzma5=5.2.5-2 libmagic-mgc=1:5.39-3 libmagic1=1:5.39-3 libmd0=1.0.3-3 libmount1=2.36.1-7 libmpc3=1.2.0-1 libmpdec3=2.5.1-2 libmpfr6=4.1.0-3 libncursesw6=6.2+20201114-2 libnettle8=3.7.3-1 libnghttp2-14=1.43.0-1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libp11-kit0=0.23.22-1 libpam-modules=1.4.0-7 libpam-modules-bin=1.4.0-7 libpam-runtime=1.4.0-7 libpam0g=1.4.0-7 libpcre2-8-0=10.36-2 libpcre3=2:8.39-13 libperl5.32=5.32.1-4 libpipeline1=1.5.3-1 libpng16-16=1.6.37-3 libpsl5=0.21.0-1.2 libpython3-stdlib=3.9.2-3 libpython3.9-minimal=3.9.2-1 libpython3.9-stdlib=3.9.2-1 libquadmath0=10.2.1-6 libreadline8=8.1-2 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.27+dfsg-2.1 libsasl2-modules-db=2.1.27+dfsg-2.1 libseccomp2=2.5.1-1 libselinux1=3.1-3 libsigsegv2=2.13-1 libsmartcols1=2.36.1-7 libsqlite3-0=3.34.1-3 libssh2-1=1.9.0-3 libssl1.1=1.1.1k-1 libstdc++-10-dev=10.2.1-6 libstdc++6=10.2.1-6 libsub-override-perl=0.09-2 libsystemd0=247.3-5 libtasn1-6=4.16.0-2 libtiff5=4.2.0-1 libtinfo6=6.2+20201114-2 libtirpc-common=1.3.1-1 libtirpc-dev=1.3.1-1 libtirpc3=1.3.1-1 libtool=2.4.6-15 libtsan0=10.2.1-6 libubsan1=10.2.1-6 libuchardet0=0.0.7-1 libudev1=247.3-5 libunistring2=0.9.10-4 libuuid1=2.36.1-7 libwebp6=0.6.1-2.1 libwebpdemux2=0.6.1-2.1 libwebpmux3=0.6.1-2.1 libxau6=1:1.0.9-1 libxcb1=1.14-3 libxdmcp6=1:1.1.2-3 libxml2=2.9.10+dfsg-6.7 libzstd1=1.4.8+dfsg-2.1 linux-libc-dev=5.10.46-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-5 mailcap=3.69 make=4.3-4.1 man-db=2.9.4-2 mawk=1.3.4.20200120-2 media-types=4.0.0 mime-support=3.66 ncurses-base=6.2+20201114-2 ncurses-bin=6.2+20201114-2 openssl=1.1.1k-1 patch=2.7.6-7 perl=5.32.1-4 perl-base=5.32.1-4 perl-modules-5.32=5.32.1-4 po-debconf=1.0.21+nmu1 python-babel-localedata=2.8.0+dfsg.1-7 python3=3.9.2-3 python3-alabaster=0.7.12-1 python3-all=3.9.2-3 python3-babel=2.8.0+dfsg.1-7 python3-biopython=1.78+dfsg-4 python3-certifi=2020.6.20-1 python3-chardet=4.0.0-1 python3-commonmark=0.9.1-3 python3-dateutil=2.8.1-5 python3-distutils=3.9.2-1 python3-docutils=0.16+dfsg-4 python3-idna=2.10-1 python3-imagesize=1.2.0-2 python3-jinja2=2.11.3-1 python3-lib2to3=3.9.2-1 python3-markupsafe=1.1.1-1+b3 python3-minimal=3.9.2-3 python3-numpy=1:1.19.5-1 python3-packaging=20.9-2 python3-pandas=1.1.5+dfsg-2 python3-pandas-lib=1.1.5+dfsg-2 python3-pil=8.1.2+dfsg-0.2 python3-pkg-resources=52.0.0-4 python3-pybedtools=0.8.0-5+b2 python3-pygments=2.7.1+dfsg-2.1 python3-pyparsing=2.4.7-1 python3-pysam=0.15.4+ds-3+b2 python3-recommonmark=0.6.0+ds-1 python3-reportlab=3.5.59-2 python3-reportlab-accel=3.5.59-2 python3-requests=2.25.1+dfsg-2 python3-roman=2.0.0-5 python3-setuptools=52.0.0-4 python3-six=1.16.0-1 python3-snowballstemmer=2.1.0-1 python3-sphinx=3.4.3-2 python3-tz=2021.1-1 python3-urllib3=1.26.5-1~exp1 python3.9=3.9.2-1 python3.9-minimal=3.9.2-1 readline-common=8.1-2 sed=4.7-1 sensible-utils=0.0.14 sgml-base=1.30 sphinx-common=3.4.3-2 sysvinit-utils=2.96-7 tar=1.34+dfsg-1 tzdata=2021a-1 util-linux=2.36.1-7 xml-core=0.18+nmu1 xz-utils=5.2.5-2 zlib1g=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210701T024305Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d mirtop=0.4.23-2 && mkdir -p /build/mirtop-P45g4p && dpkg-source --no-check -x /*.dsc /build/mirtop-P45g4p/mirtop-0.4.23 && chown -R builduser:builduser /build/mirtop-P45g4p" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/mirtop-P45g4p/mirtop-0.4.23 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1625077099" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/mirtop-P45g4p /tmp/mirtop-0.4.23-26m0_6cx9 bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20210701T024305Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.YCXTBPnk0Q as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.YCXTBPnk0Q Reading package lists... Building dependency tree... util-linux is already the newest version (2.36.1-7). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20210701T024305Z unstable/main amd64 libfakeroot amd64 1.25.3-1.1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20210701T024305Z unstable/main amd64 fakeroot amd64 1.25.3-1.1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (881 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4667 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1.1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1.1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1.1_amd64.deb ... Unpacking fakeroot (1.25.3-1.1) ... Setting up libfakeroot:amd64 (1.25.3-1.1) ... Setting up fakeroot (1.25.3-1.1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-12) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210701T024305Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.YCXTBPnk0Q Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20210701T024305Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 20s (1135 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.YCXTBPnk0Q I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d mirtop=0.4.23-2 && mkdir -p /build/mirtop-P45g4p && dpkg-source --no-check -x /*.dsc /build/mirtop-P45g4p/mirtop-0.4.23 && chown -R builduser:builduser /build/mirtop-P45g4p"' exec /tmp/mmdebstrap.YCXTBPnk0Q Reading package lists... NOTICE: 'mirtop' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/mirtop.git Please use: git clone https://salsa.debian.org/med-team/mirtop.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 231 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main mirtop 0.4.23-2 (dsc) [2299 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main mirtop 0.4.23-2 (tar) [223 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main mirtop 0.4.23-2 (diff) [5192 B] Fetched 231 kB in 0s (799 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'mirtop_0.4.23-2.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting mirtop in /build/mirtop-P45g4p/mirtop-0.4.23 dpkg-source: info: unpacking mirtop_0.4.23.orig.tar.gz dpkg-source: info: unpacking mirtop_0.4.23-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling dpkg-source: info: applying fix-circular-import.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/mirtop-P45g4p/mirtop-0.4.23 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1625077099" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.YCXTBPnk0Q dpkg-buildpackage: info: source package mirtop dpkg-buildpackage: info: source version 0.4.23-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-source: info: using options from mirtop-0.4.23/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ fakeroot debian/rules clean dh clean --with python3,sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p 3.9 I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-mirtop.substvars debian/mirtop.substvars ./mirtop/version.py debian/files rm -fr -- debian/python3-mirtop/ debian/tmp/ debian/mirtop/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-indep dh build-indep --with python3,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_autoreconf -i -O--buildsystem=pybuild dh_auto_configure -i -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.9 I: pybuild base:232: python3.9 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/mirtop-P45g4p/mirtop-0.4.23' dh_auto_build pybuild --build -i python{version} -p 3.9 I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py creating /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop copying mirtop/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop copying mirtop/command_line.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop copying mirtop/install.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop copying mirtop/version.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop creating /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/bam copying mirtop/bam/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/bam copying mirtop/bam/filter.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/bam copying mirtop/bam/bam.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/bam creating /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna copying mirtop/mirna/mintplates.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna copying mirtop/mirna/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna copying mirtop/mirna/realign.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna copying mirtop/mirna/fasta.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna copying mirtop/mirna/keys.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna copying mirtop/mirna/annotate.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna copying mirtop/mirna/snps.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna copying mirtop/mirna/mapper.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna creating /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/validator.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/query.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/merge.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/convert.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/stats.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/read.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/compare.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/header.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/body.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/update.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/classgff.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/check.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff copying mirtop/gff/gff_versions.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff creating /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer copying mirtop/importer/seqbuster.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer copying mirtop/importer/manatee.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer copying mirtop/importer/isomirsea.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer copying mirtop/importer/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer copying mirtop/importer/prost.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer copying mirtop/importer/srnabench.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer copying mirtop/importer/optimir.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer creating /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs copying mirtop/libs/sql.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs copying mirtop/libs/spikeins.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs copying mirtop/libs/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs copying mirtop/libs/parse.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs copying mirtop/libs/do.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs copying mirtop/libs/read.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs copying mirtop/libs/fastq.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs copying mirtop/libs/simulator.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs copying mirtop/libs/utils.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs copying mirtop/libs/logger.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs copying mirtop/libs/config.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs creating /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/exporter copying mirtop/exporter/seqbuster.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/exporter copying mirtop/exporter/isomirs.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/exporter copying mirtop/exporter/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/exporter copying mirtop/exporter/fasta.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/exporter copying mirtop/exporter/vcf.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/exporter running egg_info creating mirtop.egg-info writing mirtop.egg-info/PKG-INFO writing dependency_links to mirtop.egg-info/dependency_links.txt writing entry points to mirtop.egg-info/entry_points.txt writing top-level names to mirtop.egg-info/top_level.txt writing manifest file 'mirtop.egg-info/SOURCES.txt' reading manifest file 'mirtop.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'mirtop.egg-info/SOURCES.txt' PYTHONPATH=. python3 -m sphinx -N -bman docs/ build/man # Manpage generator Running Sphinx v3.4.3 making output directory... done WARNING: html_static_path entry '_static' does not exist building [mo]: targets for 0 po files that are out of date building [man]: all manpages updating environment: [new config] 10 added, 0 changed, 0 removed reading sources... [ 10%] CONTRIBUTING reading sources... [ 20%] code /build/mirtop-P45g4p/mirtop-0.4.23/mirtop/mirna/mintplates.py:512: SyntaxWarning: "is" with a literal. Did you mean "=="? if prefix is '': reading sources... [ 30%] code_structure reading sources... [ 40%] competition reading sources... [ 50%] how_to_contribute reading sources... [ 60%] index reading sources... [ 70%] installation reading sources... [ 80%] issue_template reading sources... [ 90%] output reading sources... [100%] quick_start /build/mirtop-P45g4p/mirtop-0.4.23/mirtop/gff/body.py:docstring of mirtop.gff.body.lift_to_genome:7: WARNING: Unexpected indentation. /build/mirtop-P45g4p/mirtop-0.4.23/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.hits:1: WARNING: duplicate object description of mirtop.mirna.realign.hits, other instance in code, use :noindex: for one of them /build/mirtop-P45g4p/mirtop-0.4.23/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir, other instance in code, use :noindex: for one of them /build/mirtop-P45g4p/mirtop-0.4.23/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.format:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.format, other instance in code, use :noindex: for one of them /build/mirtop-P45g4p/mirtop-0.4.23/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.formatGFF:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.formatGFF, other instance in code, use :noindex: for one of them /build/mirtop-P45g4p/mirtop-0.4.23/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.format_id:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.format_id, other instance in code, use :noindex: for one of them /build/mirtop-P45g4p/mirtop-0.4.23/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.get_score:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.get_score, other instance in code, use :noindex: for one of them /build/mirtop-P45g4p/mirtop-0.4.23/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.is_iso:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.is_iso, other instance in code, use :noindex: for one of them /build/mirtop-P45g4p/mirtop-0.4.23/mirtop/mirna/realign.py:docstring of mirtop.mirna.realign.isomir.set_pos:1: WARNING: duplicate object description of mirtop.mirna.realign.isomir.set_pos, other instance in code, use :noindex: for one of them /build/mirtop-P45g4p/mirtop-0.4.23/docs/code_structure.md:5: WARNING: Unexpected indentation. /build/mirtop-P45g4p/mirtop-0.4.23/docs/code_structure.md:6: WARNING: Block quote ends without a blank line; unexpected unindent. /build/mirtop-P45g4p/mirtop-0.4.23/docs/code_structure.md:12: WARNING: Unexpected indentation. /build/mirtop-P45g4p/mirtop-0.4.23/docs/code_structure.md:13: WARNING: Block quote ends without a blank line; unexpected unindent. /build/mirtop-P45g4p/mirtop-0.4.23/docs/code_structure.md:24: WARNING: Unexpected indentation. /build/mirtop-P45g4p/mirtop-0.4.23/docs/code_structure.md:25: WARNING: Block quote ends without a blank line; unexpected unindent. /build/mirtop-P45g4p/mirtop-0.4.23/docs/code_structure.md:39: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:10: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:15: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:30: WARNING: Unexpected indentation. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:31: WARNING: Definition list ends without a blank line; unexpected unindent. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:31: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:31: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:38: WARNING: Unexpected indentation. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:36: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:42: WARNING: Block quote ends without a blank line; unexpected unindent. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:42: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:42: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:54: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:54: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:56: WARNING: Definition list ends without a blank line; unexpected unindent. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:56: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:56: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:62: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:62: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:64: WARNING: Definition list ends without a blank line; unexpected unindent. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:64: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:64: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:90: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:90: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:89: WARNING: Unexpected indentation. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:92: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:92: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:109: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:109: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:101: WARNING: Unexpected indentation. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:104: WARNING: Unexpected indentation. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:107: WARNING: Definition list ends without a blank line; unexpected unindent. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:111: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/how_to_contribute.md:111: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/installation.md:21: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/installation.md:35: WARNING: Inline literal start-string without end-string. /build/mirtop-P45g4p/mirtop-0.4.23/docs/installation.md:35: WARNING: Inline interpreted text or phrase reference start-string without end-string. looking for now-outdated files... none found pickling environment... done checking consistency... /build/mirtop-P45g4p/mirtop-0.4.23/docs/CONTRIBUTING.md: WARNING: document isn't included in any toctree /build/mirtop-P45g4p/mirtop-0.4.23/docs/issue_template.md: WARNING: document isn't included in any toctree done writing... mirtop.1 { competition installation quick_start output code_structure how_to_contribute code } done build succeeded, 55 warnings. The manual pages are in build/man. make[1]: Leaving directory '/build/mirtop-P45g4p/mirtop-0.4.23' rm -f debian/mirtop.debhelper.log debian/python3-mirtop.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/mirtop-P45g4p/mirtop-0.4.23' # No tests, yet Not testing. make[1]: Leaving directory '/build/mirtop-P45g4p/mirtop-0.4.23' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-indep dh binary-indep --with python3,sphinxdoc --buildsystem=pybuild dh_testroot -i -O--buildsystem=pybuild dh_prep -i -O--buildsystem=pybuild rm -f -- debian/python3-mirtop.substvars debian/mirtop.substvars rm -fr -- debian/.debhelper/generated/python3-mirtop/ debian/python3-mirtop/ debian/tmp/ debian/.debhelper/generated/mirtop/ debian/mirtop/ dh_auto_install -i -O--buildsystem=pybuild install -d /build/mirtop-P45g4p/mirtop-0.4.23/debian/tmp pybuild --install -i python{version} -p 3.9 --dest-dir /build/mirtop-P45g4p/mirtop-0.4.23/debian/tmp I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop running install running build running build_py copying mirtop/version.py -> /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop running egg_info writing mirtop.egg-info/PKG-INFO writing dependency_links to mirtop.egg-info/dependency_links.txt writing entry points to mirtop.egg-info/entry_points.txt writing top-level names to mirtop.egg-info/top_level.txt reading manifest file 'mirtop.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'mirtop.egg-info/SOURCES.txt' running install_lib creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9 creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/command_line.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/bam copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/bam/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/bam copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/bam/filter.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/bam copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/bam/bam.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/bam creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna/mintplates.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna/realign.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna/fasta.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna/keys.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna/annotate.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna/snps.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/mirna/mapper.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/validator.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/query.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/merge.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/convert.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/stats.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/read.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/compare.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/header.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/body.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/update.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/classgff.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/check.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/gff/gff_versions.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer/seqbuster.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer/manatee.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer/isomirsea.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer/prost.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer/srnabench.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/importer/optimir.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/install.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs/sql.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs/spikeins.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs/parse.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs/do.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs/read.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs/fastq.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs/simulator.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs/utils.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs/logger.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/libs/config.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/version.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop creating /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/exporter copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/exporter/seqbuster.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/exporter copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/exporter/isomirs.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/exporter copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/exporter/__init__.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/exporter copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/exporter/fasta.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/exporter copying /build/mirtop-P45g4p/mirtop-0.4.23/.pybuild/cpython3_3.9_mirtop/build/mirtop/exporter/vcf.py -> /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/exporter byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/__init__.py to __init__.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/command_line.py to command_line.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/bam/__init__.py to __init__.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/bam/filter.py to filter.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/bam/bam.py to bam.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna/mintplates.py to mintplates.cpython-39.pyc /usr/lib/python3.9/dist-packages/mirtop/mirna/mintplates.py:512: SyntaxWarning: "is" with a literal. Did you mean "=="? byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna/__init__.py to __init__.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna/realign.py to realign.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna/fasta.py to fasta.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna/keys.py to keys.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna/annotate.py to annotate.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna/snps.py to snps.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/mirna/mapper.py to mapper.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/validator.py to validator.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/__init__.py to __init__.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/query.py to query.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/merge.py to merge.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/convert.py to convert.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/stats.py to stats.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/read.py to read.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/compare.py to compare.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/header.py to header.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/body.py to body.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/update.py to update.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/classgff.py to classgff.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/check.py to check.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/gff/gff_versions.py to gff_versions.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer/seqbuster.py to seqbuster.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer/manatee.py to manatee.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer/isomirsea.py to isomirsea.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer/__init__.py to __init__.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer/prost.py to prost.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer/srnabench.py to srnabench.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/importer/optimir.py to optimir.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/install.py to install.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs/sql.py to sql.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs/spikeins.py to spikeins.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs/__init__.py to __init__.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs/parse.py to parse.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs/do.py to do.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs/read.py to read.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs/fastq.py to fastq.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs/simulator.py to simulator.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs/utils.py to utils.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs/logger.py to logger.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/libs/config.py to config.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/version.py to version.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/exporter/seqbuster.py to seqbuster.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/exporter/isomirs.py to isomirs.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/exporter/__init__.py to __init__.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/exporter/fasta.py to fasta.cpython-39.pyc byte-compiling /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop/exporter/vcf.py to vcf.cpython-39.pyc running install_egg_info Copying mirtop.egg-info to /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/lib/python3.9/dist-packages/mirtop-0.4.23.egg-info Skipping SOURCES.txt running install_scripts Installing mirtop script to /build/mirtop-P45g4p/mirtop-0.4.23/debian/python3-mirtop/usr/bin debian/rules override_dh_install make[1]: Entering directory '/build/mirtop-P45g4p/mirtop-0.4.23' dh_install install -d debian/.debhelper/generated/python3-mirtop install -d debian/mirtop//usr/bin cp --reflink=auto -a ./debian/python3-mirtop/usr/bin/mirtop debian/mirtop//usr/bin/ install -d debian/.debhelper/generated/mirtop rm debian/python3-mirtop/usr/bin/mirtop make[1]: Leaving directory '/build/mirtop-P45g4p/mirtop-0.4.23' dh_installdocs -i -O--buildsystem=pybuild install -d debian/python3-mirtop/usr/share/doc/python3-mirtop install -p -m0644 debian/copyright debian/python3-mirtop/usr/share/doc/python3-mirtop/copyright install -d debian/mirtop/usr/share/doc/mirtop install -p -m0644 debian/copyright debian/mirtop/usr/share/doc/mirtop/copyright dh_sphinxdoc -i -O--buildsystem=pybuild dh_sphinxdoc: warning: Sphinx documentation not found dh_installchangelogs -i -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/mirtop/usr/share/doc/mirtop/changelog.Debian install -p -m0644 ./HISTORY.md debian/mirtop/usr/share/doc/mirtop/changelog install -p -m0644 debian/changelog debian/python3-mirtop/usr/share/doc/python3-mirtop/changelog.Debian install -p -m0644 ./HISTORY.md debian/python3-mirtop/usr/share/doc/python3-mirtop/changelog dh_installman -i -O--buildsystem=pybuild install -d debian/mirtop/usr/share/man/man1/ install -p -m0644 ./build/man/mirtop.1 debian/mirtop/usr/share/man/man1/mirtop.1 man-recode --to-code UTF-8 --suffix .dh-new debian/mirtop/usr/share/man/man1/mirtop.1 mv debian/mirtop/usr/share/man/man1/mirtop.1.dh-new debian/mirtop/usr/share/man/man1/mirtop.1 chmod 0644 -- debian/mirtop/usr/share/man/man1/mirtop.1 dh_python3 -i -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 4.20201102+nmu1 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-i', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': False, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:165: supported Python versions: 3.9 (default=3.9) D: dh_python3 debhelper:152: source=mirtop, binary packages=['python3-mirtop', 'mirtop'] D: dh_python3 dh_python3:183: processing package python3-mirtop... D: dh_python3 fs:49: moving files from debian/python3-mirtop/usr/lib/python3.9/dist-packages to debian/python3-mirtop/usr/lib/python3/dist-packages/ D: dh_python3 fs:260: package python3-mirtop details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package python3-mirtop D: dh_python3 depends:275: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python3 dh_python3:183: processing package mirtop... D: dh_python3 fs:260: package mirtop details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': set(), 'private_dirs': {}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package mirtop D: dh_python3 depends:275: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installinit -i -O--buildsystem=pybuild dh_installsystemduser -i -O--buildsystem=pybuild dh_perl -i -O--buildsystem=pybuild dh_link -i -O--buildsystem=pybuild dh_strip_nondeterminism -i -O--buildsystem=pybuild dh_compress -i -O--buildsystem=pybuild cd debian/python3-mirtop cd debian/mirtop chmod a-x usr/share/doc/mirtop/changelog usr/share/doc/mirtop/changelog.Debian usr/share/man/man1/mirtop.1 chmod a-x usr/share/doc/python3-mirtop/changelog usr/share/doc/python3-mirtop/changelog.Debian gzip -9nf usr/share/doc/mirtop/changelog usr/share/doc/mirtop/changelog.Debian usr/share/man/man1/mirtop.1 gzip -9nf usr/share/doc/python3-mirtop/changelog usr/share/doc/python3-mirtop/changelog.Debian cd '/build/mirtop-P45g4p/mirtop-0.4.23' cd '/build/mirtop-P45g4p/mirtop-0.4.23' dh_fixperms -i -O--buildsystem=pybuild find debian/python3-mirtop -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/mirtop -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-mirtop ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/mirtop ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/mirtop/usr/share/doc -type f -a -true -a ! -regex 'debian/mirtop/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/mirtop/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-mirtop/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-mirtop/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/mirtop/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-mirtop/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/mirtop -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-mirtop -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/mirtop/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-mirtop/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -i -O--buildsystem=pybuild dh_installdeb -i -O--buildsystem=pybuild install -d debian/python3-mirtop/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-mirtop/DEBIAN/postinst cat debian/python3-mirtop.postinst.debhelper >> debian/python3-mirtop/DEBIAN/postinst chmod 0755 -- debian/python3-mirtop/DEBIAN/postinst chown 0:0 -- debian/python3-mirtop/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-mirtop/DEBIAN/prerm cat debian/python3-mirtop.prerm.debhelper >> debian/python3-mirtop/DEBIAN/prerm chmod 0755 -- debian/python3-mirtop/DEBIAN/prerm chown 0:0 -- debian/python3-mirtop/DEBIAN/prerm install -d debian/mirtop/DEBIAN dh_gencontrol -i -O--buildsystem=pybuild echo misc:Depends= >> debian/python3-mirtop.substvars echo misc:Pre-Depends= >> debian/python3-mirtop.substvars dpkg-gencontrol -ppython3-mirtop -ldebian/changelog -Tdebian/python3-mirtop.substvars -Pdebian/python3-mirtop echo misc:Depends= >> debian/mirtop.substvars echo misc:Pre-Depends= >> debian/mirtop.substvars dpkg-gencontrol -pmirtop -ldebian/changelog -Tdebian/mirtop.substvars -Pdebian/mirtop dpkg-gencontrol: warning: Depends field of package python3-mirtop: substitution variable ${sphinxdoc:Depends} used, but is not defined chmod 0644 -- debian/python3-mirtop/DEBIAN/control chown 0:0 -- debian/python3-mirtop/DEBIAN/control chmod 0644 -- debian/mirtop/DEBIAN/control chown 0:0 -- debian/mirtop/DEBIAN/control dh_md5sums -i -O--buildsystem=pybuild cd debian/python3-mirtop >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/mirtop >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-mirtop/DEBIAN/md5sums chown 0:0 -- debian/python3-mirtop/DEBIAN/md5sums chmod 0644 -- debian/mirtop/DEBIAN/md5sums chown 0:0 -- debian/mirtop/DEBIAN/md5sums dh_builddeb -i -O--buildsystem=pybuild dpkg-deb --build debian/python3-mirtop .. dpkg-deb --build debian/mirtop .. dpkg-deb: building package 'mirtop' in '../mirtop_0.4.23-2_all.deb'. dpkg-deb: building package 'python3-mirtop' in '../python3-mirtop_0.4.23-2_all.deb'. dpkg-genbuildinfo --build=all dpkg-genchanges --build=all >../mirtop_0.4.23-2_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-source: info: using options from mirtop-0.4.23/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/mirtop-P45g4p /tmp/mirtop-0.4.23-26m0_6cx9 I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.YCXTBPnk0Q... I: success in 425.8185 seconds md5: mirtop_0.4.23-2_all.deb: OK md5: python3-mirtop_0.4.23-2_all.deb: OK sha1: mirtop_0.4.23-2_all.deb: OK sha1: python3-mirtop_0.4.23-2_all.deb: OK sha256: mirtop_0.4.23-2_all.deb: OK sha256: python3-mirtop_0.4.23-2_all.deb: OK Checksums: OK