Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/m/megadepth/megadepth_1.2.0-2_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/megadepth-1.2.0-2xiuvtsio/megadepth_1.2.0-2_amd64.buildinfo Get source package info: megadepth=1.2.0-2 Source URL: http://snapshot.notset.fr/mr/package/megadepth/1.2.0-2/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6 binutils=2.38-3 binutils-common=2.38-3 binutils-x86-64-linux-gnu=2.38-3 bsdextrautils=2.37.3-1+b1 bsdutils=1:2.37.3-1+b1 build-essential=12.9 bzip2=1.0.8-5 cmake=3.23.0-1 cmake-data=3.23.0-1 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.2.0-19 dash=0.5.11+git20210903+057cd650a4ed-8 debconf=1.5.79 debhelper=13.6 debianutils=5.7-0.1 dh-autoreconf=20 dh-elpa-helper=2.0.10 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.7 dpkg-dev=1.21.7 dwz=0.14-1 emacsen-common=3.0.4 file=1:5.41-3 findutils=4.9.0-2 g++=4:11.2.0-2 g++-11=11.2.0-19 gcc=4:11.2.0-2 gcc-11=11.2.0-19 gcc-11-base=11.2.0-19 gcc-12-base=12-20220319-1 gettext=0.21-6 gettext-base=0.21-6 grep=3.7-1 groff-base=1.22.4-8 gzip=1.12-1 help2man=1.49.1 hostname=3.23 init-system-helpers=1.62 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libarchive-zip-perl=1.68-1 libarchive13=3.6.0-1 libasan6=11.2.0-19 libatomic1=12-20220319-1 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libbigwig-dev=0.4.6+dfsg-1 libbigwig0=0.4.6+dfsg-1 libbinutils=2.38-3 libblkid1=2.37.3-1+b1 libbrotli1=1.0.9-2+b3 libbz2-1.0=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dev=2.33-7 libcap-ng0=0.7.9-2.2+b2 libcap2=1:2.44-1 libcc1-0=12-20220319-1 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38-3 libctf0=2.38-3 libcurl3-gnutls=7.82.0-2 libcurl4=7.82.0-2 libcurl4-gnutls-dev=7.82.0-2 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.261 libdebhelper-perl=13.6 libdeflate-dev=1.10-2 libdeflate0=1.10-2 libdpkg-perl=1.21.7 libelf1=0.186-1 libexpat1=2.4.8-1 libffi8=3.4.2-4 libfile-stripnondeterminism-perl=1.13.0-1 libgcc-11-dev=11.2.0-19 libgcc-s1=12-20220319-1 libgcrypt20=1.10.1-2 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgmp10=2:6.2.1+dfsg-3 libgnutls30=3.7.3-4+b1 libgomp1=12-20220319-1 libgpg-error0=1.43-3 libgssapi-krb5-2=1.19.2-2+b1 libhogweed6=3.7.3-1 libhts-dev=1.13+ds-2 libhts3=1.13+ds-2 libhtscodecs2=1.2.1-1 libicu67=67.1-7 libidn2-0=2.3.2-2 libisl23=0.24-2 libitm1=12-20220319-1 libjsoncpp25=1.9.5-4 libk5crypto3=1.19.2-2+b1 libkeyutils1=1.6.1-3 libkrb5-3=1.19.2-2+b1 libkrb5support0=1.19.2-2+b1 libldap-2.5-0=2.5.11+dfsg-1 liblocale-gettext-perl=1.07-4+b2 liblsan0=12-20220319-1 liblz4-1=1.9.3-2 liblzma-dev=5.2.5-2.1 liblzma5=5.2.5-2.1 libmagic-mgc=1:5.41-3 libmagic1=1:5.41-3 libmount1=2.37.3-1+b1 libmpc3=1.2.1-2 libmpfr6=4.1.0-3 libncurses6=6.3-2 libncursesw6=6.3-2 libnettle8=3.7.3-1 libnghttp2-14=1.43.0-1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libp11-kit0=0.24.0-6 libpam-modules=1.4.0-11 libpam-modules-bin=1.4.0-11 libpam-runtime=1.4.0-11 libpam0g=1.4.0-11 libpcre2-8-0=10.39-3 libpcre3=2:8.39-14 libperl5.34=5.34.0-4 libpipeline1=1.5.5-1 libprocps8=2:3.3.17-7+b1 libpsl5=0.21.0-1.2 libquadmath0=12-20220319-1 librhash0=1.4.2-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.28+dfsg-2+b1 libsasl2-modules-db=2.1.28+dfsg-2+b1 libseccomp2=2.5.3-2 libselinux1=3.3-1+b2 libsigsegv2=2.14-1 libsmartcols1=2.37.3-1+b1 libssh2-1=1.10.0-3 libssl1.1=1.1.1n-1 libstdc++-11-dev=11.2.0-19 libstdc++6=12-20220319-1 libsub-override-perl=0.09-2 libsystemd0=250.4-1 libtasn1-6=4.18.0-4 libtinfo6=6.3-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.7-3 libtsan0=11.2.0-19 libubsan1=12-20220319-1 libuchardet0=0.0.7-1 libudev1=250.4-1 libunistring2=1.0-1 libuuid1=2.37.3-1+b1 libuv1=1.44.1-2 libxml2=2.9.13+dfsg-1 libzstd1=1.4.10+dfsg-1 linux-libc-dev=5.16.18-1 login=1:4.11.1+dfsg1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.2-1 mawk=1.3.4.20200120-3+b1 ncurses-base=6.3-2 ncurses-bin=6.3-2 patch=2.7.6-7 perl=5.34.0-4 perl-base=5.34.0-4 perl-modules-5.34=5.34.0-4 po-debconf=1.0.21+nmu1 procps=2:3.3.17-7+b1 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sysvinit-utils=3.01-1 tar=1.34+dfsg-1 util-linux=2.37.3-1+b1 xz-utils=5.2.5-2.1 zlib1g=1:1.2.11.dfsg-4 zlib1g-dev=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220411T155650Z/ unstable main deb-src http://snapshot.notset.fr/archive/debian/20220411T155650Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220411T092602Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d megadepth=1.2.0-2 && mkdir -p /build/megadepth-SEx48y && dpkg-source --no-check -x /*.dsc /build/megadepth-SEx48y/megadepth-1.2.0 && chown -R builduser:builduser /build/megadepth-SEx48y" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/megadepth-SEx48y/megadepth-1.2.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1649665978" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/megadepth-SEx48y /tmp/megadepth-1.2.0-2xiuvtsio bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220411T092602Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.LvTLTFDI5i as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.LvTLTFDI5i Reading package lists... Building dependency tree... util-linux is already the newest version (2.37.3-1+b1). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 135 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220411T092602Z unstable/main amd64 libfakeroot amd64 1.28-1 [48.2 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220411T092602Z unstable/main amd64 fakeroot amd64 1.28-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 135 kB in 0s (1123 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4701 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.28-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.28-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.28-1_amd64.deb ... Unpacking fakeroot (1.28-1) ... Setting up libfakeroot:amd64 (1.28-1) ... Setting up fakeroot (1.28-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220411T155650Z/ unstable main deb-src http://snapshot.notset.fr/archive/debian/20220411T155650Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220411T092602Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.LvTLTFDI5i Get:1 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable InRelease [165 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20220411T092602Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable/main Sources [12.9 MB] Get:4 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable/main amd64 Packages [12.4 MB] Fetched 25.4 MB in 21s (1211 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.LvTLTFDI5i I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d megadepth=1.2.0-2 && mkdir -p /build/megadepth-SEx48y && dpkg-source --no-check -x /*.dsc /build/megadepth-SEx48y/megadepth-1.2.0 && chown -R builduser:builduser /build/megadepth-SEx48y"' exec /tmp/mmdebstrap.LvTLTFDI5i Reading package lists... NOTICE: 'megadepth' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/megadepth.git Please use: git clone https://salsa.debian.org/med-team/megadepth.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 258 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable/main megadepth 1.2.0-2 (dsc) [2022 B] Get:2 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable/main megadepth 1.2.0-2 (tar) [252 kB] Get:3 http://snapshot.notset.fr/archive/debian/20220411T155650Z unstable/main megadepth 1.2.0-2 (diff) [3912 B] Fetched 258 kB in 0s (926 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'megadepth_1.2.0-2.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting megadepth in /build/megadepth-SEx48y/megadepth-1.2.0 dpkg-source: info: unpacking megadepth_1.2.0.orig.tar.gz dpkg-source: info: unpacking megadepth_1.2.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying addCurlLibrary.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/megadepth-SEx48y/megadepth-1.2.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1649665978" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.LvTLTFDI5i dpkg-buildpackage: info: source package megadepth dpkg-buildpackage: info: source version 1.2.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean if [ ! -r CMakeLists.txt ]; then ln -s CMakeLists.txt.ci CMakeLists.txt; fi #if [ ! -d htslib ]; then mkdir -p htslib; ln -s /usr/lib/`dpkg-architecture -qDEB_BUILD_MULTIARCH`/libhts.a htslib/; fi #if [ ! -d libBigWig ]; then mkdir -p libBigWig; ln -s /usr/lib/`dpkg-architecture -qDEB_BUILD_MULTIARCH`/libBigWig.a libBigWig/; fi #if [ ! -d libdeflate ]; then mkdir -p libdeflate; ln -s /usr/lib/`dpkg-architecture -qDEB_BUILD_MULTIARCH`/libdeflate.a libdeflate/; fi #if [ ! -d zlib ]; then mkdir -p zlib; ln -s /usr/lib/`dpkg-architecture -qDEB_BUILD_MULTIARCH`/libz.a zlib/; fi dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/megadepth-SEx48y/megadepth-1.2.0' dh_auto_clean if [ -d zlib_ci ]; then rmdir zlib_ci; fi if [ -d libBigWig_ci ]; then rmdir libBigWig_ci; fi if [ -d libdeflate_ci ]; then rmdir libdeflate_ci; fi if [ -d htslib_ci ]; then rmdir htslib_ci; fi rm -rf htslib libbigwig libBigWig libdeflate libz zlib rm CMakeLists.txt rm -f debian/megadepth.1 make[1]: Leaving directory '/build/megadepth-SEx48y/megadepth-1.2.0' dh_clean debian/rules binary-arch if [ ! -r CMakeLists.txt ]; then ln -s CMakeLists.txt.ci CMakeLists.txt; fi #if [ ! -d htslib ]; then mkdir -p htslib; ln -s /usr/lib/`dpkg-architecture -qDEB_BUILD_MULTIARCH`/libhts.a htslib/; fi #if [ ! -d libBigWig ]; then mkdir -p libBigWig; ln -s /usr/lib/`dpkg-architecture -qDEB_BUILD_MULTIARCH`/libBigWig.a libBigWig/; fi #if [ ! -d libdeflate ]; then mkdir -p libdeflate; ln -s /usr/lib/`dpkg-architecture -qDEB_BUILD_MULTIARCH`/libdeflate.a libdeflate/; fi #if [ ! -d zlib ]; then mkdir -p zlib; ln -s /usr/lib/`dpkg-architecture -qDEB_BUILD_MULTIARCH`/libz.a zlib/; fi dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 11.2.0 -- The CXX compiler identification is GNU 11.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for pthread.h -- Looking for pthread.h - found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu dh_auto_build -a cd obj-x86_64-linux-gnu && make -j10 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/megadepth-SEx48y/megadepth-1.2.0 -B/build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu/CMakeFiles /build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu' make -f CMakeFiles/megadepth_dynamic.dir/build.make CMakeFiles/megadepth_dynamic.dir/depend make[3]: Entering directory '/build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu' cd /build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/megadepth-SEx48y/megadepth-1.2.0 /build/megadepth-SEx48y/megadepth-1.2.0 /build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu /build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu /build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu/CMakeFiles/megadepth_dynamic.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu' make -f CMakeFiles/megadepth_dynamic.dir/build.make CMakeFiles/megadepth_dynamic.dir/build make[3]: Entering directory '/build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu' [ 50%] Building CXX object CMakeFiles/megadepth_dynamic.dir/megadepth.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/megadepth-SEx48y/megadepth-1.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -DMEGADEPTH_VERSION="\"`cat ../VERSION`\"" -std=gnu++11 -MD -MT CMakeFiles/megadepth_dynamic.dir/megadepth.cpp.o -MF CMakeFiles/megadepth_dynamic.dir/megadepth.cpp.o.d -o CMakeFiles/megadepth_dynamic.dir/megadepth.cpp.o -c /build/megadepth-SEx48y/megadepth-1.2.0/megadepth.cpp /build/megadepth-SEx48y/megadepth-1.2.0/megadepth.cpp: In instantiation of ‘int go(const char*, int, const char**, Op, htsFile*, bool) [with T = double; htsFile = htsFile]’: /build/megadepth-SEx48y/megadepth-1.2.0/megadepth.cpp:3504:26: required from here /build/megadepth-SEx48y/megadepth-1.2.0/megadepth.cpp:3369:72: warning: format ‘%u’ expects argument of type ‘unsigned int’, but argument 3 has type ‘long int’ [-Wformat=] 3369 | fprintf(stderr,"total number of annotations in collapsed: %u\n",num_sizes); | ~^ ~~~~~~~~~ | | | | | long int | unsigned int | %lu /build/megadepth-SEx48y/megadepth-1.2.0/megadepth.cpp: In instantiation of ‘int go(const char*, int, const char**, Op, htsFile*, bool) [with T = long int; htsFile = htsFile]’: /build/megadepth-SEx48y/megadepth-1.2.0/megadepth.cpp:3506:24: required from here /build/megadepth-SEx48y/megadepth-1.2.0/megadepth.cpp:3369:72: warning: format ‘%u’ expects argument of type ‘unsigned int’, but argument 3 has type ‘long int’ [-Wformat=] 3369 | fprintf(stderr,"total number of annotations in collapsed: %u\n",num_sizes); | ~^ ~~~~~~~~~ | | | | | long int | unsigned int | %lu [100%] Linking CXX executable megadepth_dynamic /usr/bin/cmake -E cmake_link_script CMakeFiles/megadepth_dynamic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/megadepth-SEx48y/megadepth-1.2.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -DMEGADEPTH_VERSION="\"`cat ../VERSION`\"" -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/megadepth_dynamic.dir/megadepth.cpp.o -o megadepth_dynamic -lpthread -lhts -lBigWig -lcurl -ldeflate -lz make[3]: Leaving directory '/build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu' [100%] Built target megadepth_dynamic make[2]: Leaving directory '/build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/megadepth-SEx48y/megadepth-1.2.0/obj-x86_64-linux-gnu' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/build/megadepth-SEx48y/megadepth-1.2.0' dh_auto_install mkdir -p debian/megadepth/usr/bin cp obj-*/megadepth_dynamic debian/megadepth/usr/bin/megadepth make[1]: Leaving directory '/build/megadepth-SEx48y/megadepth-1.2.0' dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installman make[1]: Entering directory '/build/megadepth-SEx48y/megadepth-1.2.0' help2man -n "Quantification of genome coverage by DNA/RNA seqencing" obj-*/megadepth_dynamic > debian/megadepth.1 dh_installman make[1]: Leaving directory '/build/megadepth-SEx48y/megadepth-1.2.0' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'megadepth-dbgsym' in '../megadepth-dbgsym_1.2.0-2_amd64.deb'. dpkg-deb: building package 'megadepth' in '../megadepth_1.2.0-2_amd64.deb'. dpkg-genbuildinfo --build=any -O../megadepth_1.2.0-2_amd64.buildinfo dpkg-genchanges --build=any -O../megadepth_1.2.0-2_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/megadepth-SEx48y /tmp/megadepth-1.2.0-2xiuvtsio I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.LvTLTFDI5i... I: success in 412.7906 seconds md5: megadepth-dbgsym_1.2.0-2_amd64.deb: OK md5: megadepth_1.2.0-2_amd64.deb: OK sha1: megadepth-dbgsym_1.2.0-2_amd64.deb: OK sha1: megadepth_1.2.0-2_amd64.deb: OK sha256: megadepth-dbgsym_1.2.0-2_amd64.deb: OK sha256: megadepth_1.2.0-2_amd64.deb: OK Checksums: OK