Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/m/meep/meep_1.22.0-2_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/meep-1.22.0-2t99au9po/meep_1.22.0-2_amd64.buildinfo Get source package info: meep=1.22.0-2 Source URL: http://snapshot.notset.fr/mr/package/meep/1.22.0-2/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=adduser=3.118 autoconf=2.71-2 automake=1:1.16.5-1.1 autopoint=0.21-4 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6 binutils=2.38-2 binutils-common=2.38-2 binutils-x86-64-linux-gnu=2.38-2 blt=2.5.3+dfsg-4.1 bsdextrautils=2.37.3-1+b1 bsdutils=1:2.37.3-1+b1 build-essential=12.9 bzip2=1.0.8-5 chrpath=0.16-2+b1 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.2.0-18 dash=0.5.11+git20210903+057cd650a4ed-3 debconf=1.5.79 debhelper=13.6 debianutils=5.7-0.1 dh-autoreconf=20 dh-strip-nondeterminism=1.13.0-1 diffstat=1.64-1 diffutils=1:3.7-5 dpkg=1.21.1 dpkg-dev=1.21.1 dwz=0.14-1 ed=1.18-1 file=1:5.41-2 findutils=4.9.0-2 fontconfig-config=2.13.1-4.4 fonts-dejavu-core=2.37-2 fonts-lyx=2.3.6-1 g++=4:11.2.0-2 g++-11=11.2.0-18 gcc=4:11.2.0-2 gcc-11=11.2.0-18 gcc-11-base=11.2.0-18 gcc-12-base=12-20220302-1 gettext=0.21-4 gettext-base=0.21-4 gfortran=4:11.2.0-2 gfortran-11=11.2.0-18 grep=3.7-1 groff-base=1.22.4-8 guile-2.2=2.2.7+1-6+b1 guile-2.2-dev=2.2.7+1-6+b1 guile-2.2-libs=2.2.7+1-6+b1 guile-3.0-libs=3.0.8-1 gzip=1.10-4 hdf5-helpers=1.10.7+repack-4 hostname=3.23 ibverbs-providers=39.0-1 init-system-helpers=1.62 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libaec-dev=1.0.6-1 libaec0=1.0.6-1 libarchive-zip-perl=1.68-1 libasan6=11.2.0-18 libatomic1=12-20220302-1 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1 libbinutils=2.38-2 libblas-dev=3.10.0-2 libblas3=3.10.0-2 libblkid1=2.37.3-1+b1 libbrotli1=1.0.9-2+b3 libbsd0=0.11.5-1+b1 libbz2-1.0=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dev=2.33-7 libcap-ng0=0.7.9-2.2+b1 libcap2=1:2.44-1 libcc1-0=12-20220302-1 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38-2 libctf0=2.38-2 libctl-dev=4.5.1-1 libctl7=4.5.1-1 libcurl3-gnutls=7.81.0-1 libcurl4=7.81.0-1 libcurl4-openssl-dev=7.81.0-1 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.261 libdebhelper-perl=13.6 libdeflate0=1.10-1 libdpkg-perl=1.21.1 libelf1=0.186-1 libevent-core-2.1-7=2.1.12-stable-1 libevent-pthreads-2.1-7=2.1.12-stable-1 libexpat1=2.4.6-1 libexpat1-dev=2.4.6-1 libfabric1=1.11.0-3 libffi8=3.4.2-4 libfftw3-bin=3.3.8-2 libfftw3-dev=3.3.8-2 libfftw3-double3=3.3.8-2 libfftw3-long3=3.3.8-2 libfftw3-quad3=3.3.8-2 libfftw3-single3=3.3.8-2 libfile-stripnondeterminism-perl=1.13.0-1 libfontconfig1=2.13.1-4.4 libfreetype6=2.11.1+dfsg-1 libfribidi0=1.0.8-2 libgc-dev=1:8.0.6-1.1 libgc1=1:8.0.6-1.1 libgcc-11-dev=11.2.0-18 libgcc-s1=12-20220302-1 libgcrypt20=1.9.4-5 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgdsii-dev=0.2+ds.1-1 libgdsii0=0.2+ds.1-1 libgfortran-11-dev=11.2.0-18 libgfortran5=12-20220302-1 libglib2.0-0=2.70.4-1 libgmp-dev=2:6.2.1+dfsg-3 libgmp10=2:6.2.1+dfsg-3 libgmpxx4ldbl=2:6.2.1+dfsg-3 libgnutls30=3.7.3-4+b1 libgomp1=12-20220302-1 libgpg-error0=1.43-3 libgraphite2-3=1.3.14-1 libgsl-dev=2.7.1+dfsg-3 libgsl27=2.7.1+dfsg-3 libgslcblas0=2.7.1+dfsg-3 libgssapi-krb5-2=1.19.2-2 libharfbuzz0b=2.7.4-1 libharminv-dev=1.4.1-3 libharminv3=1.4.1-3 libhdf5-103-1=1.10.7+repack-4 libhdf5-cpp-103-1=1.10.7+repack-4 libhdf5-dev=1.10.7+repack-4 libhdf5-fortran-102=1.10.7+repack-4 libhdf5-hl-100=1.10.7+repack-4 libhdf5-hl-cpp-100=1.10.7+repack-4 libhdf5-hl-fortran-100=1.10.7+repack-4 libhdf5-openmpi-103-1=1.10.7+repack-4 libhogweed6=3.7.3-1 libhwloc-plugins=2.7.0-2 libhwloc15=2.7.0-2 libibverbs1=39.0-1 libicu67=67.1-7 libidn2-0=2.3.2-2 libimagequant0=2.17.0-1 libisl23=0.24-2 libitm1=12-20220302-1 libjbig0=2.1-3.1+b2 libjpeg-dev=1:2.1.2-1 libjpeg62-turbo=1:2.1.2-1 libjpeg62-turbo-dev=1:2.1.2-1 libjs-jquery=3.6.0+dfsg+~3.5.13-1 libjs-jquery-ui=1.13.1+dfsg-1 libjs-sphinxdoc=4.3.2-1 libjs-underscore=1.13.2~dfsg-2 libk5crypto3=1.19.2-2 libkeyutils1=1.6.1-2 libkrb5-3=1.19.2-2 libkrb5support0=1.19.2-2 liblapack-dev=3.10.0-2 liblapack3=3.10.0-2 liblbfgsb0=3.0+dfsg.3-10 liblcms2-2=2.12~rc1-2 libldap-2.4-2=2.4.59+dfsg-1+b1 liblsan0=12-20220302-1 libltdl-dev=2.4.6-15 libltdl7=2.4.6-15 liblz4-1=1.9.3-2 liblzf1=3.6-3 liblzma5=5.2.5-2 libmagic-mgc=1:5.41-2 libmagic1=1:5.41-2 libmd0=1.0.4-1 libmount1=2.37.3-1+b1 libmpc3=1.2.1-1 libmpdec3=2.5.1-2 libmpfr6=4.1.0-3 libncurses-dev=6.3-2 libncurses5-dev=6.3-2 libncurses6=6.3-2 libncursesw6=6.3-2 libnettle8=3.7.3-1 libnghttp2-14=1.43.0-1 libnl-3-200=3.5.0-0.1 libnl-route-3-200=3.5.0-0.1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libnuma1=2.0.14-3 libopenjp2-7=2.4.0-6 libopenmpi3=4.1.2-2 libp11-kit0=0.24.0-6 libpam-modules=1.4.0-11 libpam-modules-bin=1.4.0-11 libpam-runtime=1.4.0-11 libpam0g=1.4.0-11 libpciaccess0=0.16-3 libpcre2-8-0=10.39-3 libpcre3=2:8.39-13 libperl5.34=5.34.0-3 libpipeline1=1.5.5-1 libpmix2=4.1.2-2 libpng16-16=1.6.37-3 libpsl5=0.21.0-1.2 libpsm-infinipath1=3.3+20.604758e7-6.1 libpsm2-2=11.2.185-1 libpython3-dev=3.9.8-1 libpython3-stdlib=3.9.8-1 libpython3.10-minimal=3.10.2-5 libpython3.10-stdlib=3.10.2-5 libpython3.9=3.9.10-2 libpython3.9-dev=3.9.10-2 libpython3.9-minimal=3.9.10-2 libpython3.9-stdlib=3.9.10-2 libqhull-r8.0=2020.2-4 libquadmath0=12-20220302-1 libraqm0=0.7.0-4 librdmacm1=39.0-1 libreadline-dev=8.1.2-1 libreadline8=8.1.2-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.28+dfsg-2 libsasl2-modules-db=2.1.28+dfsg-2 libseccomp2=2.5.3-2 libselinux1=3.3-1+b1 libsemanage-common=3.3-1 libsemanage2=3.3-1+b1 libsepol2=3.3-1 libsigsegv2=2.14-1 libsmartcols1=2.37.3-1+b1 libsqlite3-0=3.38.0-1 libssh2-1=1.10.0-3 libssl-dev=1.1.1m-1 libssl1.1=1.1.1m-1 libstdc++-11-dev=11.2.0-18 libstdc++6=12-20220302-1 libsub-override-perl=0.09-2 libsystemd0=250.3-2 libsz2=1.0.6-1 libtasn1-6=4.18.0-4 libtcl8.6=8.6.12+dfsg-1 libtiff5=4.3.0-4+b1 libtinfo6=6.3-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtk8.6=8.6.12-1 libtool=2.4.6-15 libtsan0=11.2.0-18 libubsan1=12-20220302-1 libuchardet0=0.0.7-1 libucx0=1.12.1~rc2-1 libudev1=250.3-2 libunistring2=1.0-1 libuuid1=2.37.3-1+b1 libwebp7=1.2.1-7+b1 libwebpdemux2=1.2.1-7+b1 libwebpmux3=1.2.1-7+b1 libx11-6=2:1.7.2-2+b1 libx11-data=2:1.7.2-2 libxau6=1:1.0.9-1 libxcb1=1.14-3 libxdmcp6=1:1.1.2-3 libxext6=2:1.3.4-1 libxft2=2.3.2-2 libxml2=2.9.13+dfsg-1 libxnvctrl0=470.103.01-1 libxrender1=1:0.9.10-1 libxslt1.1=1.1.34-4 libxss1=1:1.2.3-1 libzstd1=1.4.8+dfsg-3 linux-libc-dev=5.16.11-1 login=1:4.11.1+dfsg1-1 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.1-1 mawk=1.3.4.20200120-3+b1 media-types=5.0.0 mpb=1.11.1-4 mpb-dev=1.11.1-4 mpb-scm=1.11.1-4 ncurses-base=6.3-2 ncurses-bin=6.3-2 ocl-icd-libopencl1=2.2.14-3 passwd=1:4.11.1+dfsg1-1 patch=2.7.6-7 perl=5.34.0-3 perl-base=5.34.0-3 perl-modules-5.34=5.34.0-3 pkg-config=0.29.2-1 po-debconf=1.0.21+nmu1 python-matplotlib-data=3.5.1-2 python3=3.9.8-1 python3-appdirs=1.4.4-2 python3-attr=21.2.0-1 python3-brotli=1.0.9-2+b3 python3-cycler=0.11.0-1 python3-dateutil=2.8.1-6 python3-decorator=4.4.2-2 python3-dev=3.9.8-1 python3-distutils=3.9.10-1 python3-fonttools=4.29.1-2 python3-fs=2.4.12-1 python3-h5py=3.6.0-2 python3-h5py-serial=3.6.0-2 python3-kiwisolver=1.3.2-1+b1 python3-lib2to3=3.9.10-1 python3-lxml=4.8.0-1 python3-lz4=3.1.3+dfsg-1+b1 python3-matplotlib=3.5.1-2+b1 python3-minimal=3.9.8-1 python3-mpmath=1.2.1-2 python3-numpy=1:1.21.5-1 python3-packaging=21.3-1 python3-pil=9.0.1-1 python3-pil.imagetk=9.0.1-1 python3-pkg-resources=59.6.0-1.2 python3-pyparsing=3.0.7-1 python3-scipy=1.7.3-2 python3-six=1.16.0-3 python3-sympy=1.9-1 python3-tk=3.9.10-1 python3-tz=2021.3-1 python3-ufolib2=0.13.1+dfsg1-1 python3-unicodedata2=14.0.0+ds-7 python3.10=3.10.2-5 python3.10-minimal=3.10.2-5 python3.9=3.9.10-2 python3.9-dev=3.9.10-2 python3.9-minimal=3.9.10-2 quilt=0.66-2.1 readline-common=8.1.2-1 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 swig=4.0.2-2 swig4.0=4.0.2-2 sysvinit-utils=3.01-1 tar=1.34+dfsg-1 tk8.6-blt2.5=2.5.3+dfsg-4.1 tzdata=2021e-1 ucf=3.0043 unicode-data=14.0.0-1.1 util-linux=2.37.3-1+b1 x11-common=1:7.7+23 xz-utils=5.2.5-2 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220310T035035Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220310T035035Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220304T204941Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220303T211415Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d meep=1.22.0-2 && mkdir -p /build/meep-qYdsD8 && dpkg-source --no-check -x /*.dsc /build/meep-qYdsD8/meep-1.22.0 && chown -R builduser:builduser /build/meep-qYdsD8" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/meep-qYdsD8/meep-1.22.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1646241709" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/meep-qYdsD8 /tmp/meep-1.22.0-2t99au9po bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220303T211415Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.W95d6O6CsX as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.W95d6O6CsX Reading package lists... Building dependency tree... util-linux is already the newest version (2.37.3-1+b1). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 136 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220303T211415Z unstable/main amd64 libfakeroot amd64 1.27-1 [48.5 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220303T211415Z unstable/main amd64 fakeroot amd64 1.27-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 136 kB in 0s (1062 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4693 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.27-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.27-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.27-1_amd64.deb ... Unpacking fakeroot (1.27-1) ... Setting up libfakeroot:amd64 (1.27-1) ... Setting up fakeroot (1.27-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220310T035035Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220310T035035Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220304T204941Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220303T211415Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.W95d6O6CsX Get:1 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm InRelease [130 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220304T204941Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220303T211415Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm/main Sources [11.9 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm/main amd64 Packages [11.3 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220304T204941Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220304T204941Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220304T204941Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220304T204941Z unstable/main amd64 Packages [12.2 MB] Fetched 35.8 MB in 29s (1242 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.W95d6O6CsX I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d meep=1.22.0-2 && mkdir -p /build/meep-qYdsD8 && dpkg-source --no-check -x /*.dsc /build/meep-qYdsD8/meep-1.22.0 && chown -R builduser:builduser /build/meep-qYdsD8"' exec /tmp/mmdebstrap.W95d6O6CsX Reading package lists... NOTICE: 'meep' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/alteholz/meep.git Please use: git clone https://salsa.debian.org/alteholz/meep.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 32.7 MB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm/main meep 1.22.0-2 (dsc) [2417 B] Get:2 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm/main meep 1.22.0-2 (tar) [32.6 MB] Get:3 http://snapshot.notset.fr/archive/debian/20220310T035035Z bookworm/main meep 1.22.0-2 (diff) [143 kB] Fetched 32.7 MB in 26s (1278 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'meep_1.22.0-2.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting meep in /build/meep-qYdsD8/meep-1.22.0 dpkg-source: info: unpacking meep_1.22.0.orig.tar.gz dpkg-source: info: unpacking meep_1.22.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying i386-fix.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/meep-qYdsD8/meep-1.22.0 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1646241709" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.W95d6O6CsX dpkg-buildpackage: info: source package meep dpkg-buildpackage: info: source version 1.22.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Thorsten Alteholz dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with autoreconf debian/rules override_dh_clean make[1]: Entering directory '/build/meep-qYdsD8/meep-1.22.0' # we do not need this anymore rm -f tests/latest_output dh_clean make[1]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0' debian/rules build-arch dh build-arch --with autoreconf dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:74: warning: The macro `AC_TRY_COMPILE' is obsolete. configure.ac:74: You should run autoupdate. ./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from... m4/ax_mpi.m4:69: AX_MPI is expanded from... configure.ac:74: the top level configure.ac:64: installing './compile' configure.ac:109: installing './config.guess' configure.ac:109: installing './config.sub' configure.ac:12: installing './install-sh' configure.ac:12: installing './missing' libpympb/Makefile.am: installing './depcomp' python/Makefile.am:231: installing './py-compile' parallel-tests: installing './test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/meep-qYdsD8/meep-1.22.0' # the latest patch is only needed on architectures without SSE or other special stuff if [ "amd64" = "i386" ] || \ [ "amd64" = "hurd-i386" ] ; then \ echo "all patches needed, do nothing here"; \ else \ echo "we don't need the last patch"; \ quilt pop; \ fi we don't need the last patch Removing patch debian/patches/i386-fix.patch Restoring src/mympi.cpp No patches applied F77=gfortran dh_auto_configure -- --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --with-libctl=/usr/share/libctl --with-gcc-arch=no --enable-shared --with-pic --enable-cxx --enable-maintainer-mode ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --build=x86_64-linux-gnu --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --with-libctl=/usr/share/libctl --with-gcc-arch=no --enable-shared --with-pic --enable-cxx --enable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... yes checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of x86_64-linux-gnu-gcc... none checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking dependency style of x86_64-linux-gnu-g++... none checking whether x86_64-linux-gnu-g++ supports C++11 features by default... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for C++ compiler vendor... gnu checking whether C++ compiler accepts -fstrict-aliasing... yes checking whether C++ compiler accepts -ffast-math... yes checking for gcc architecture flag... checking for gcc architecture flag... unknown checking whether C++ compiler accepts -O3 -fstrict-aliasing... yes checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by x86_64-linux-gnu-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/x86_64-linux-gnu-nm -B checking the name lister (/usr/bin/x86_64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-linux-gnu-objdump... x86_64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for x86_64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking for archiver @FILE support... @ checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking command to parse /usr/bin/x86_64-linux-gnu-nm -B output from x86_64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-gcc static flag -static works... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... yes checking if x86_64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... x86_64-linux-gnu-g++ -E checking for ld used by x86_64-linux-gnu-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-linux-gnu-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-linux-gnu-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-linux-gnu-g++ static flag -static works... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... yes checking if x86_64-linux-gnu-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-linux-gnu-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for latex2html... no configure: WARNING: Cannot find latex2html in your path! checking for sin in -lm... yes checking for fftw_plan_dft_1d in -lfftw3... yes checking for x86_64-linux-gnu-g77... gfortran checking whether the compiler supports GNU Fortran 77... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking if sgemm_ is being linked in already... no checking for sgemm_ in -lopenblas... no checking for ATL_xerbla in -latlas... no checking for sgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for sgemm_ in -lmkl_intel_lp64... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -framework vecLib... no checking for sgemm_ in -lcxml... no checking for sgemm_ in -ldxml... no checking for sgemm_ in -lscs... no checking for sgemm_ in -lcomplib.sgimath... no checking for sgemm_ in -lblas... (cached) yes checking for sgemm_ in -lessl... no checking for sgemm_ in -lblas... (cached) yes checking for cheev_... no checking for cheev_ in -llapack... yes checking for pkg-config... /usr/bin/pkg-config checking for harminv >= 1.1... yes checking HARMINV_CFLAGS... checking HARMINV_LIBS... -lharminv checking for mpb.h... yes checking for maxwell_target_operator1 in -lmpb... yes checking for cos in -lm... yes checking for cblas_dgemm in -lgslcblas... yes checking for gsl_sf_bessel_Jn in -lgsl... yes checking for deflate in -lz... yes checking for H5Pcreate in -lhdf5... yes checking for H5Pcreate... yes checking for hdf5.h... yes checking for H5Pset_mpi... no checking for H5Pset_fapl_mpio... no checking for guile-config... guile-config checking if linking to guile works... yes checking for libguile.h... yes checking for guile/gh.h... no checking for scm_make_smob_type... yes checking for SCM_SMOB_PREDICATE... no checking for SCM_SMOB_DATA... no checking for SCM_NEWSMOB... no checking how to activate readline in Guile... ice-9 readline checking for libctl dir... /usr/share/libctl checking for gen-ctl-io... gen-ctl-io checking for ctl_get_vector3 in -lctl... yes checking for ctl.h... yes checking whether libctl version is at least 4.2.0... ok checking for libctl_quiet feature... yes checking for vector3_dot in -lctlgeom... yes checking for libGDSII.h... yes checking for libGDSIIExists in -lGDSII... yes checking for libGDSII::GetLayers... no checking for feenableexcept... yes checking whether feenableexcept declaration is usable... yes checking whether to catch and ignore SIGFPE signals... no checking for sys/time.h... yes checking for immintrin.h... yes checking for BSDgettimeofday... no checking for gettimeofday... yes checking for cblas_ddot... yes checking for cblas_daxpy... yes checking for jn... yes checking for C/C++ restrict keyword... no checking for swig... swig checking for python... no checking for python2... no checking for python3... /usr/bin/python3 checking for python version... 3.9 checking for python platform... linux checking for GNU default python prefix... ${prefix} checking for GNU default python exec_prefix... ${exec_prefix} checking for python script directory (pythondir)... ${PYTHON_PREFIX}/lib/python3.9/site-packages checking for python extension module directory (pyexecdir)... ${PYTHON_EXEC_PREFIX}/lib/python3.9/site-packages checking for Python include directory... /usr/include/python3.9 checking for Python.h... yes checking for Numpy include directory... /usr/lib/python3/dist-packages/numpy/core/include checking for numpy/arrayobject.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating scheme/Makefile config.status: creating scheme/meep.scm config.status: creating libpympb/Makefile config.status: creating python/Makefile config.status: creating Makefile config.status: creating meep-pkgconfig config.status: creating src/Makefile config.status: creating src/support/Makefile config.status: creating tests/Makefile config.status: creating src/meep/meep-config.h config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0' dh_auto_build -a make -j1 make[1]: Entering directory '/build/meep-qYdsD8/meep-1.22.0' make all-recursive make[2]: Entering directory '/build/meep-qYdsD8/meep-1.22.0' Making all in src make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/src' make sphere_quad make[4]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/src' x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o sphere-quad.o sphere-quad.cpp /bin/bash ../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -O3 -fstrict-aliasing -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o sphere_quad sphere-quad.o -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath libtool: link: x86_64-linux-gnu-g++ -O3 -fstrict-aliasing -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o sphere_quad sphere-quad.o -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/src' (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; ../src/sphere_quad) > sphere-quad.h (echo "/* This file was automatically generated --- DO NOT EDIT */"; echo; sed 's/LOOP_OVER/S1LOOP_OVER/g' ../src/step_generic.cpp | sed 's/step_curl/step_curl_stride1/' | sed 's/step_update_EDHB/step_update_EDHB_stride1/' | sed 's/step_beta/step_beta_stride1/') > step_generic_stride1.cpp make all-recursive make[4]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/src' Making all in support make[5]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/src/support' /bin/bash ../../libtool --tag=CC --mode=compile x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-qYdsD8/meep-1.22.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffast-math -c -o mt19937ar.lo mt19937ar.c libtool: compile: x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-qYdsD8/meep-1.22.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffast-math -c mt19937ar.c -fPIC -DPIC -o .libs/mt19937ar.o libtool: compile: x86_64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -g -O2 -ffile-prefix-map=/build/meep-qYdsD8/meep-1.22.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffast-math -c mt19937ar.c -fPIC -DPIC -o mt19937ar.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=link x86_64-linux-gnu-gcc -g -O2 -ffile-prefix-map=/build/meep-qYdsD8/meep-1.22.0=. -fstack-protector-strong -Wformat -Werror=format-security -ffast-math -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o libsupport.la mt19937ar.lo -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath libtool: link: x86_64-linux-gnu-ar cr .libs/libsupport.a .libs/mt19937ar.o libtool: link: x86_64-linux-gnu-ranlib .libs/libsupport.a libtool: link: ( cd ".libs" && rm -f "libsupport.la" && ln -s "../libsupport.la" "libsupport.la" ) make[5]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/src/support' make[5]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/src' /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread 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../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o mympi.lo mympi.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c mympi.cpp -fPIC -DPIC -o .libs/mympi.o mympi.cpp: In function ‘meep::ivec meep::max_to_all(const meep::ivec&)’: mympi.cpp:410:7: warning: variable ‘in’ set but not used [-Wunused-but-set-variable] 410 | int in[5], out[5]; | ^~ mympi.cpp: In function ‘void meep::abort(const char*, ...)’: mympi.cpp:250:12: warning: ignoring return value of ‘int vasprintf(char**, const char*, __va_list_tag*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 250 | vasprintf(&s, fmt, ap); | ~~~~~~~~~^~~~~~~~~~~~~ mympi.cpp: In function ‘void meep::_do_master_printf(FILE*, meep::meep_printf_callback_func, const char*, __va_list_tag*)’: mympi.cpp:694:16: warning: ignoring return value of ‘int vasprintf(char**, const char*, __va_list_tag*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 694 | vasprintf(&s, fmt, ap); | ~~~~~~~~~^~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c mympi.cpp -fPIC -DPIC -o mympi.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o multilevel-atom.lo multilevel-atom.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c multilevel-atom.cpp -fPIC -DPIC -o .libs/multilevel-atom.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c multilevel-atom.cpp -fPIC -DPIC -o multilevel-atom.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o near2far.lo near2far.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c near2far.cpp -fPIC -DPIC -o .libs/near2far.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c near2far.cpp -fPIC -DPIC -o near2far.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o output_directory.lo output_directory.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c output_directory.cpp -fPIC -DPIC -o .libs/output_directory.o output_directory.cpp: In function ‘const char* meep::make_output_directory(const char*, const char*)’: output_directory.cpp:117:35: warning: ‘-out’ directive output may be truncated writing 4 bytes into a region of size between 1 and 300 [-Wformat-truncation=] 117 | snprintf(outdirname, buflen, "%s-out", basename); | ^~~~ In file included from /usr/include/stdio.h:866, from output_directory.cpp:18: /usr/include/x86_64-linux-gnu/bits/stdio2.h:71:35: note: ‘__builtin___snprintf_chk’ output between 5 and 304 bytes into a destination of size 300 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ output_directory.cpp:126:36: warning: ‘%s’ directive output may be truncated writing up to 299 bytes into a region of size between 0 and 299 [-Wformat-truncation=] 126 | snprintf(outsrcname, buflen, "%s/%s", outdirname, sourcename); | ^~ ~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from output_directory.cpp:18: /usr/include/x86_64-linux-gnu/bits/stdio2.h:71:35: note: ‘__builtin___snprintf_chk’ output between 2 and 600 bytes into a destination of size 300 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ output_directory.cpp:122:39: warning: ‘-out-’ directive output may be truncated writing 5 bytes into a region of size between 1 and 300 [-Wformat-truncation=] 122 | snprintf(outdirname, buflen, "%s-out-%d", basename, i++); | ^~~~~ output_directory.cpp:122:36: note: directive argument in the range [0, 2147483647] 122 | snprintf(outdirname, buflen, "%s-out-%d", basename, i++); | ^~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from output_directory.cpp:18: /usr/include/x86_64-linux-gnu/bits/stdio2.h:71:35: note: ‘__builtin___snprintf_chk’ output between 7 and 315 bytes into a destination of size 300 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c output_directory.cpp -fPIC -DPIC -o output_directory.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o random.lo random.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c random.cpp -fPIC -DPIC -o .libs/random.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c random.cpp -fPIC -DPIC -o random.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o sources.lo sources.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c sources.cpp -fPIC -DPIC -o .libs/sources.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c sources.cpp -fPIC -DPIC -o sources.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o step.lo step.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c step.cpp -fPIC -DPIC -o .libs/step.o step.cpp:144: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 144 | CHUNK_OPENMP | libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c step.cpp -fPIC -DPIC -o step.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o step_db.lo step_db.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c step_db.cpp -fPIC -DPIC -o .libs/step_db.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c step_db.cpp -fPIC -DPIC -o step_db.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o stress.lo stress.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c stress.cpp -fPIC -DPIC -o .libs/stress.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c stress.cpp -fPIC -DPIC -o stress.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o structure.lo structure.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c structure.cpp -fPIC -DPIC -o .libs/structure.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c structure.cpp -fPIC -DPIC -o structure.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o structure_dump.lo structure_dump.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c structure_dump.cpp -fPIC -DPIC -o .libs/structure_dump.o structure_dump.cpp: In member function ‘void meep::structure::dump(const char*, bool)’: structure_dump.cpp:297:46: warning: ‘_’ directive output may be truncated writing 1 byte into a region of size between 0 and 9 [-Wformat-truncation=] 297 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^ structure_dump.cpp:297:31: note: using the range [-2147483648, 2147483647] for directive argument 297 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:866, from structure_dump.cpp:22: /usr/include/x86_64-linux-gnu/bits/stdio2.h:71:35: note: ‘__builtin___snprintf_chk’ output between 14 and 43 bytes into a destination of size 20 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ structure_dump.cpp: In member function ‘void meep::structure::load(const char*, bool)’: structure_dump.cpp:749:44: warning: ‘%d’ directive output may be truncated writing between 1 and 2 bytes into a region of size between 1 and 10 [-Wformat-truncation=] 749 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~ structure_dump.cpp:749:31: note: directive argument in the range [0, 19] 749 | snprintf(dname, 20, "%c_%d_sigma_%d_%d", ft == 0 ? 'E' : 'H', i, c, d); | ^~~~~~~~~~~~~~~~~~~ structure_dump.cpp:749:31: note: directive argument in the range [0, 4] In file included from /usr/include/stdio.h:866, from structure_dump.cpp:22: /usr/include/x86_64-linux-gnu/bits/stdio2.h:71:35: note: ‘__builtin___snprintf_chk’ output between 14 and 24 bytes into a destination of size 20 71 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c structure_dump.cpp -fPIC -DPIC -o structure_dump.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o susceptibility.lo susceptibility.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c susceptibility.cpp -fPIC -DPIC -o .libs/susceptibility.o susceptibility.cpp:228: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 228 | PLOOP_OVER_VOL_OWNED(gv, c, i) { | susceptibility.cpp:242: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 242 | PLOOP_OVER_VOL_OWNED(gv, c, i) { | susceptibility.cpp:252: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 252 | PLOOP_OVER_VOL_OWNED(gv, c, i) { | libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c susceptibility.cpp -fPIC -DPIC -o susceptibility.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o time.lo time.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c time.cpp -fPIC -DPIC -o .libs/time.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c time.cpp -fPIC -DPIC -o time.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o update_eh.lo update_eh.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c update_eh.cpp -fPIC -DPIC -o .libs/update_eh.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c update_eh.cpp -fPIC -DPIC -o update_eh.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o mpb.lo mpb.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c mpb.cpp -fPIC -DPIC -o .libs/mpb.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c mpb.cpp -fPIC -DPIC -o mpb.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o update_pols.lo update_pols.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c update_pols.cpp -fPIC -DPIC -o .libs/update_pols.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c update_pols.cpp -fPIC -DPIC -o update_pols.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o vec.lo vec.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c vec.cpp -fPIC -DPIC -o .libs/vec.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c vec.cpp -fPIC -DPIC -o vec.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o step_generic.lo step_generic.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c step_generic.cpp -fPIC -DPIC -o .libs/step_generic.o step_generic.cpp:91: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 91 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:97: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 97 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:104: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 104 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:109: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 109 | PLOOP_OVER_IVECS(gv, is, ie, i) { f[i] -= dtdx * (g1[i + s1] - g1[i]); } | step_generic.cpp:118: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 118 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:128: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 128 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:138: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 138 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:146: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 146 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:162: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 162 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:172: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 172 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:182: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 182 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:189: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 189 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:202: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 202 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:216: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 216 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:229: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 229 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:239: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 239 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:267: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 267 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:279: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 279 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:290: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 290 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:298: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 298 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:309: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 309 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:317: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 317 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:327: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 327 | PLOOP_OVER_IVECS(gv, is, ie, i) { f[i] += betadt * g[i] * cndinv[i]; } | step_generic.cpp:330: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 330 | PLOOP_OVER_IVECS(gv, is, ie, i) { f[i] += betadt * g[i]; } | step_generic.cpp:392: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 392 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:407: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 407 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:419: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 419 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:431: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 431 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:447: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 447 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:460: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 460 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:475: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 475 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:486: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 486 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:496: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 496 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:508: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 508 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:519: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 519 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:528: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 528 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:537: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 537 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:550: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 550 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:560: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 560 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:572: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 572 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:580: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 580 | PLOOP_OVER_IVECS(gv, is, ie, i) { | step_generic.cpp:587: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 587 | PLOOP_OVER_IVECS(gv, is, ie, i) { f[i] = g[i]; } | libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c step_generic.cpp -fPIC -DPIC -o step_generic.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o meepgeom.lo meepgeom.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c meepgeom.cpp -fPIC -DPIC -o .libs/meepgeom.o meepgeom.cpp: In copy constructor ‘meep_geom::geom_epsilon::geom_epsilon(const meep_geom::geom_epsilon&)’: meepgeom.cpp:705:1: warning: base class ‘class meep::material_function’ should be explicitly initialized in the copy constructor [-Wextra] 705 | geom_epsilon::geom_epsilon(const geom_epsilon &geps1) { | ^~~~~~~~~~~~ meepgeom.cpp: In function ‘std::complex meep_geom::cond_cmp(meep::component, const meep::vec&, double, meep_geom::geom_epsilon*)’: meepgeom.cpp:2642:1: warning: control reaches end of non-void function [-Wreturn-type] 2642 | } | ^ meepgeom.cpp: In function ‘void meep_geom::material_grids_addgradient_point(double*, vector3, double, meep_geom::geom_epsilon*, meep::component, meep::component, std::complex, std::complex, double, meep::grid_volume&, double)’: meepgeom.cpp:2849:28: warning: ‘kind’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2849 | add_interpolate_weights(p.x, p.y, p.z, vcur, sz.x, sz.y, sz.z, 1, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2850 | scalegrad, ucur, kind, uval, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2851 | vector3_to_vec(p), geps, adjoint_c, forward_c, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2852 | fwd, adj, freq, gv, tol); | ~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c meepgeom.cpp -fPIC -DPIC -o meepgeom.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o GDSIIgeom.lo GDSIIgeom.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o .libs/GDSIIgeom.o libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c GDSIIgeom.cpp -fPIC -DPIC -o GDSIIgeom.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o step_generic_stride1.lo step_generic_stride1.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o .libs/step_generic_stride1.o step_generic_stride1.cpp:93: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 93 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:93: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:99: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 99 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:99: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:106: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 106 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:106: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:111: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 111 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { f[i] -= dtdx * (g1[i + s1] - g1[i]); } | step_generic_stride1.cpp:111: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:120: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 120 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:120: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:130: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 130 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:130: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:140: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 140 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:140: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:148: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 148 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:148: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:164: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 164 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:164: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:174: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 174 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:174: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:184: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 184 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:184: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:191: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 191 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:191: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:204: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 204 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:204: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:218: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 218 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:218: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:231: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 231 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:231: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:241: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 241 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:241: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:269: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 269 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:269: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:281: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 281 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:281: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:292: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 292 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:292: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:300: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 300 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:300: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:311: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 311 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:311: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:319: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 319 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:319: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:329: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 329 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { f[i] += betadt * g[i] * cndinv[i]; } | step_generic_stride1.cpp:329: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:332: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 332 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { f[i] += betadt * g[i]; } | step_generic_stride1.cpp:332: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:394: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 394 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:394: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:409: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 409 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:409: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:421: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 421 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:421: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:433: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 433 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:433: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:449: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 449 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:449: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:462: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 462 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:462: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:477: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 477 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:477: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:488: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 488 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:488: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:498: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 498 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:498: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:510: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 510 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:510: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:521: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 521 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:521: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:530: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 530 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:530: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:539: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 539 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:539: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:552: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 552 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:552: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:562: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 562 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:562: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:574: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 574 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:574: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:582: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 582 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { | step_generic_stride1.cpp:582: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] step_generic_stride1.cpp:589: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas] 589 | PS1LOOP_OVER_IVECS(gv, is, ie, i) { f[i] = g[i]; } | step_generic_stride1.cpp:589: warning: ignoring ‘#pragma omp simd’ [-Wunknown-pragmas] libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c step_generic_stride1.cpp -fPIC -DPIC -o step_generic_stride1.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -O3 -fstrict-aliasing -Wall -W -version-info 27:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o libmeep.la -rpath /usr/lib/x86_64-linux-gnu array_slice.lo anisotropic_averaging.lo bands.lo boundaries.lo bicgstab.lo casimir.lo cw_fields.lo dft.lo dft_ldos.lo energy_and_flux.lo fields.lo fields_dump.lo loop_in_chunks.lo h5fields.lo h5file.lo initialize.lo integrate.lo integrate2.lo material_data.lo monitor.lo mympi.lo multilevel-atom.lo near2far.lo output_directory.lo random.lo sources.lo step.lo step_db.lo stress.lo structure.lo structure_dump.lo susceptibility.lo time.lo update_eh.lo mpb.lo update_pols.lo vec.lo step_generic.lo meepgeom.lo GDSIIgeom.lo step_generic_stride1.lo support/libsupport.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath libtool: link: x86_64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/11/crtbeginS.o .libs/array_slice.o .libs/anisotropic_averaging.o .libs/bands.o .libs/boundaries.o .libs/bicgstab.o .libs/casimir.o .libs/cw_fields.o .libs/dft.o .libs/dft_ldos.o .libs/energy_and_flux.o .libs/fields.o .libs/fields_dump.o .libs/loop_in_chunks.o .libs/h5fields.o .libs/h5file.o .libs/initialize.o .libs/integrate.o .libs/integrate2.o .libs/material_data.o .libs/monitor.o .libs/mympi.o .libs/multilevel-atom.o .libs/near2far.o .libs/output_directory.o .libs/random.o .libs/sources.o .libs/step.o .libs/step_db.o .libs/stress.o .libs/structure.o .libs/structure_dump.o .libs/susceptibility.o .libs/time.o .libs/update_eh.o .libs/mpb.o .libs/update_pols.o .libs/vec.o .libs/step_generic.o .libs/meepgeom.o .libs/GDSIIgeom.o .libs/step_generic_stride1.o -Wl,--whole-archive support/.libs/libsupport.a -Wl,--no-whole-archive -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lblas -lfftw3 -lgfortran -lquadmath -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/11/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crtn.o -O3 -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-soname -Wl,libmeep.so.27 -o .libs/libmeep.so.27.0.0 libtool: link: (cd ".libs" && rm -f "libmeep.so.27" && ln -s "libmeep.so.27.0.0" "libmeep.so.27") libtool: link: (cd ".libs" && rm -f "libmeep.so" && ln -s "libmeep.so.27.0.0" "libmeep.so") libtool: link: (cd .libs/libmeep.lax/libsupport.a && x86_64-linux-gnu-ar x "/build/meep-qYdsD8/meep-1.22.0/src/support/.libs/libsupport.a") libtool: link: x86_64-linux-gnu-ar cr .libs/libmeep.a array_slice.o anisotropic_averaging.o bands.o boundaries.o bicgstab.o casimir.o cw_fields.o dft.o dft_ldos.o energy_and_flux.o fields.o fields_dump.o loop_in_chunks.o h5fields.o h5file.o initialize.o integrate.o integrate2.o material_data.o monitor.o mympi.o multilevel-atom.o near2far.o output_directory.o random.o sources.o step.o step_db.o stress.o structure.o structure_dump.o susceptibility.o time.o update_eh.o mpb.o update_pols.o vec.o step_generic.o meepgeom.o GDSIIgeom.o step_generic_stride1.o .libs/libmeep.lax/libsupport.a/mt19937ar.o libtool: link: x86_64-linux-gnu-ranlib .libs/libmeep.a libtool: link: rm -fr .libs/libmeep.lax libtool: link: ( cd ".libs" && rm -f "libmeep.la" && ln -s "../libmeep.la" "libmeep.la" ) make[5]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/src' make[4]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/src' make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/src' Making all in tests make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/tests' Making all in scheme make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/scheme' gen-ctl-io --cxx --header -o ctl-io.h meep.scm /usr/share/libctl ;;; note: auto-compilation is enabled, set GUILE_AUTO_COMPILE=0 ;;; or pass the --no-auto-compile argument to disable. ;;; compiling /usr/share/libctl/base/include.scm ;;; compiled /build/meep-qYdsD8/meep-1.22.0/debian/.debhelper/generated/_source/home/.cache/guile/ccache/2.2-LE-8-3.A/usr/share/libctl/base/include.scm.go cp -f /usr/share/libctl/base/main.c main.cpp cp -f /usr/share/libctl/utils/geom.c geom.cpp gen-ctl-io --cxx --code -o ctl-io.cpp meep.scm /usr/share/libctl gen-ctl-io --cxx --swig -o ctl-io.i meep.scm /usr/share/libctl (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; perl -pe 's/^ *class +([A-Za-z_0-9:]*)( *| *:[^{]*){.*$/%rename(meep_\1) meep::\1;/' ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | grep "%rename" | sed '/meep_fields_chunk/d ; /meep_comms_manager/d ; /meep_comms_key_hash_fn/d ; /meep_timing_scope/d' | sort -u; echo; grep -hv typedef ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | perl -pe 's/(inline|const|extern|static) +//g' | perl -pe 's/^[A-Za-z_0-9:<>]+[* ]+([A-Za-z_0-9:]*) *\(.*$/%rename(meep_\1) meep::\1;/' | grep "%rename" | sed '/choose_chunkdivision/d ; /meep_create_comms_manager/d' | sort -u; ) > meep_renames.i (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; for f in ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp; do egrep "^enum" $f | perl -pe 's/enum +([A-Za-z_0-9:]+).*$/\1/g' | while read enum; do cat $f | tr -d '\n' | perl -pe 's/.*enum +'${enum}' *{([^}]*)}.*/\1/g' | perl -pe 's/= *[0-9]+//g' |tr -d ' \t' | tr ',' '\n' | perl -pe 's/^(.*)$/'"%rename(meep_${enum}_\1) meep::\1;/g"; echo; done; done;) > meep_enum_renames.i (echo "// AUTOMATICALLY GENERATED -- DO NOT EDIT"; grep -h friend ../src/meep.hpp ../src/meep/vec.hpp ../src/meep/mympi.hpp | perl -pe 's/^ *friend +[A-Za-z_0-9:<>]+[* ]+([A-Za-z_0-9:]*) *\(.*$/%ignore \1;/' | grep "%ignore" | sort -u;) > meep_swig_bug_workaround.i (perl -pe 's/%rename\(([A-Za-z0-9_]*)\) *([A-Za-z0-9:_]*);$/(define \2 (\1))/' meep_enum_renames.i | perl -pe 's/[A-Za-z0-9:_]*:://g' | perl -pe 's/_/-/g' | perl -pe 's,//,;,'; echo "(define Centered Dielectric)") > meep-enums.scm swig -I../src -c++ -guile -o meep_wrap.cxx ./meep.i patch -p0 meep_wrap.cxx < ./meep_wrap.patch patching file meep_wrap.cxx Hunk #1 succeeded at 798 (offset 47 lines). sed -i.bak '/(SCM_SMOB_PREDICATE(swig_tag, smob) || SCM_SMOB_PREDICATE(swig_collectable_tag, smob))/ s/swig_collectable_tag, smob)/swig_collectable_tag, smob) || SCM_SMOB_PREDICATE((swig_collectable_tag \& ~0xff00), (smob))/' meep_wrap.cxx; make all-am make[4]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/scheme' x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.22.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o meep-meep.o `test -f 'meep.cpp' || echo './'`meep.cpp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.22.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o meep-structure.o `test -f 'structure.cpp' || echo './'`structure.cpp In function ‘bool get_front_object(const meep::volume&, geom_box_tree, vector3&, const geometric_object**, vector3&, ctlio::material_type&, ctlio::material_type&)’, inlined from ‘virtual void geom_epsilon::eff_chi1inv_row(meep::component, double*, const meep::volume&, double, int)’ at structure.cpp:618:40: structure.cpp:581:10: warning: ‘mat1’ may be used uninitialized [-Wmaybe-uninitialized] 581 | mat2 = mat1; | ~~~~~^~~~~~ structure.cpp: In member function ‘virtual void geom_epsilon::eff_chi1inv_row(meep::component, double*, const meep::volume&, double, int)’: structure.cpp:509:17: note: ‘mat1’ declared here 509 | material_type mat1, mat2; | ^~~~ x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.22.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o meep-meep_wrap.o `test -f 'meep_wrap.cxx' || echo './'`meep_wrap.cxx meep_wrap.cxx: In function ‘scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_0(int, scm_unused_struct**)’: meep_wrap.cxx:34605:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 34605 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:34608:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 34608 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function ‘scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_1(int, scm_unused_struct**)’: meep_wrap.cxx:34664:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 34664 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:34667:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 34667 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx: In function ‘scm_unused_struct* _wrap_new_meep_dft_flux__SWIG_2(int, scm_unused_struct**)’: meep_wrap.cxx:34719:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 34719 | arg1 = (meep::component const) scm_to_int(argv[0]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ meep_wrap.cxx:34722:12: warning: type qualifiers ignored on cast result type [-Wignored-qualifiers] 34722 | arg2 = (meep::component const) scm_to_int(argv[1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.22.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o meep-main.o `test -f 'main.cpp' || echo './'`main.cpp In file included from ctl-io.h:7, from main.cpp:37: main.cpp: In function ‘void main_entry(void*, int, char**)’: main.cpp:194:31: warning: cast between incompatible function types from ‘scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM, SCM)’ {aka ‘scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)’} to ‘scm_unused_struct* (*)()’ [-Wcast-function-type] 194 | gh_new_procedure("subplex", (SCM(*)(void))subplex_scm, 7, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:202:44: warning: cast between incompatible function types from ‘scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM)’ {aka ‘scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)’} to ‘scm_unused_struct* (*)()’ [-Wcast-function-type] 202 | gh_new_procedure("adaptive-integration", (SCM(*)(void))adaptive_integration_scm, 6, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ main.cpp:205:45: warning: cast between incompatible function types from ‘scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM, SCM)’ {aka ‘scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)’} to ‘scm_unused_struct* (*)()’ [-Wcast-function-type] 205 | gh_new_procedure("cadaptive-integration", (SCM(*)(void))cadaptive_integration_scm, 6, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.22.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o meep-geom.o `test -f 'geom.cpp' || echo './'`geom.cpp geom.cpp:22: warning: "_GNU_SOURCE" redefined 22 | #define _GNU_SOURCE | : note: this is the location of the previous definition geom.cpp: In function ‘vector3 normal_to_prism(ctlio::prism*, vector3)’: geom.cpp:2357:11: warning: variable ‘axisp’ set but not used [-Wunused-but-set-variable] 2357 | vector3 axisp = vector3_scale(height, zhatp); | ^~~~~ geom.cpp: In function ‘boolean intersect_ray_with_segment(vector3, vector3, vector3, vector3, double*)’: geom.cpp:2005:13: warning: ‘ss’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2005 | if (s) *s = ss; | ~~~^~~~ x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 -DCTL_SCM='"'/usr/share/libctl/base/ctl.scm'"' -DINCLUDE_SCM='"'/usr/share/libctl/base/include.scm'"' -DSPEC_SCM='"'/usr/share/meep/meep.scm'"' -DVERSION_STRING='"'"Meep 1.22.0, Copyright (C) 2005-2022 Massachusetts Institute of Technology."'"' -pthread -I/usr/include/guile/2.2 -I../src -Wno-unused-parameter -Wno-unused-variable -Wno-empty-body -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o meep-ctl-io.o `test -f 'ctl-io.cpp' || echo './'`ctl-io.cpp In file included from ctl-io.h:7, from ctl-io.cpp:7: ctl-io.cpp: In function ‘void ctlio::export_external_functions()’: ctl-io.cpp:2229:38: warning: cast between incompatible function types from ‘scm_unused_struct* (*)(SCM, SCM)’ {aka ‘scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)’} to ‘scm_unused_struct* (*)()’ [-Wcast-function-type] 2229 | gh_new_procedure("square-basis-aux", (SCM (*)()) square_basis_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2230:51: warning: cast between incompatible function types from ‘scm_unused_struct* (*)(SCM, SCM, SCM, SCM, SCM)’ {aka ‘scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*, scm_unused_struct*)’} to ‘scm_unused_struct* (*)()’ [-Wcast-function-type] 2230 | gh_new_procedure("range-overlap-with-object-aux", (SCM (*)()) range_overlap_with_object_aux, 5, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2231:55: warning: cast between incompatible function types from ‘scm_unused_struct* (*)(SCM, SCM)’ {aka ‘scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)’} to ‘scm_unused_struct* (*)()’ [-Wcast-function-type] 2231 | gh_new_procedure("display-geometric-object-info-aux", (SCM (*)()) display_geometric_object_info_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2232:51: warning: cast between incompatible function types from ‘scm_unused_struct* (*)(SCM, SCM)’ {aka ‘scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)’} to ‘scm_unused_struct* (*)()’ [-Wcast-function-type] 2232 | gh_new_procedure("point-in-periodic-object?-aux", (SCM (*)()) point_in_periodic_objectp_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2233:42: warning: cast between incompatible function types from ‘scm_unused_struct* (*)(SCM, SCM)’ {aka ‘scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)’} to ‘scm_unused_struct* (*)()’ [-Wcast-function-type] 2233 | gh_new_procedure("normal-to-object-aux", (SCM (*)()) normal_to_object_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ctl-io.cpp:2234:42: warning: cast between incompatible function types from ‘scm_unused_struct* (*)(SCM, SCM)’ {aka ‘scm_unused_struct* (*)(scm_unused_struct*, scm_unused_struct*)’} to ‘scm_unused_struct* (*)()’ [-Wcast-function-type] 2234 | gh_new_procedure("point-in-object?-aux", (SCM (*)()) point_in_objectp_aux, 2, 0, 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -O3 -fstrict-aliasing -Wall -W -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/libmeep.la -lctl -lguile-2.2 -lgc -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath libtool: link: x86_64-linux-gnu-g++ -O3 -fstrict-aliasing -Wall -W -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o .libs/meep meep-meep.o meep-structure.o meep-meep_wrap.o meep-main.o meep-geom.o meep-ctl-io.o ../src/.libs/libmeep.so -lctl -lguile-2.2 -lgc -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath make[4]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/scheme' make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/scheme' Making all in libpympb make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/libpympb' /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wfatal-errors -I../src -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o libpympb_la-pympb.lo `test -f 'pympb.cpp' || echo './'`pympb.cpp libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wfatal-errors -I../src -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c pympb.cpp -fPIC -DPIC -o .libs/libpympb_la-pympb.o pympb.cpp: In member function ‘int py_mpb::mode_solver::mean_epsilon(symmetric_matrix*, symmetric_matrix*, mpb_real*, mpb_real, mpb_real, mpb_real, mpb_real, const mpb_real*)’: pympb.cpp:345:73: warning: ‘mat2’ may be used uninitialized in this function [-Wmaybe-uninitialized] 345 | !(id2 < id1 && (id2 == id || meep_geom::material_type_equal(mat2, mat)))) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ pympb.cpp:344:73: warning: ‘mat1’ may be used uninitialized in this function [-Wmaybe-uninitialized] 344 | else if (!(id1 < id2 && (id1 == id || meep_geom::material_type_equal(mat1, mat))) && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -Wfatal-errors -I../src -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c pympb.cpp -fPIC -DPIC -o libpympb_la-pympb.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -O3 -fstrict-aliasing -Wall -W -version-info 27:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o libpympb.la -rpath /usr/lib/x86_64-linux-gnu libpympb_la-pympb.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath libtool: link: x86_64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/11/crtbeginS.o .libs/libpympb_la-pympb.o -Wl,-rpath -Wl,/build/meep-qYdsD8/meep-1.22.0/src/.libs ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lquadmath -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/11/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crtn.o -O3 -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-soname -Wl,libpympb.so.27 -o .libs/libpympb.so.27.0.0 libtool: link: (cd ".libs" && rm -f "libpympb.so.27" && ln -s "libpympb.so.27.0.0" "libpympb.so.27") libtool: link: (cd ".libs" && rm -f "libpympb.so" && ln -s "libpympb.so.27.0.0" "libpympb.so") libtool: link: x86_64-linux-gnu-ar cr .libs/libpympb.a libpympb_la-pympb.o libtool: link: x86_64-linux-gnu-ranlib .libs/libpympb.a libtool: link: ( cd ".libs" && rm -f "libpympb.la" && ln -s "../libpympb.la" "libpympb.la" ) make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/libpympb' Making all in python make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/python' swig -Wextra -I../src -I../libpympb -I.. -outdir . -c++ -nofastunpack -python -o meep-python.cxx ./meep.i ../src/meep.hpp:1619: Warning 362: operator= ignored swig -Wextra -I../src -I../libpympb -I.. -outdir . -c++ -nofastunpack -python -o mpb-python.cxx ./mpb.i ../src/meep.hpp:1619: Warning 362: operator= ignored cp meep.py __init__.py echo "__version__ = '1.22.0'" >> __init__.py if [[ "4.0.2" = 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' __init__.py; \ sed -i.bak 's/ import _meep/from . import _meep/' __init__.py; \ fi if [[ "4.0.2" == 3.0.12 ]]; then \ sed -i.bak '/^if _swig_python_version_info >= (2, 7, 0):/,/^else:/d' mpb.py; \ sed -i.bak 's/ import _mpb/from . import _mpb/' mpb.py; \ fi make all-am make[4]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/python' /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o _meep_la-meep-python.lo `test -f 'meep-python.cxx' || echo './'`meep-python.cxx libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c meep-python.cxx -fPIC -DPIC -o .libs/_meep_la-meep-python.o meep-python.cxx: In function ‘meep::structure* create_structure(vector3, std::vector, std::vector, std::vector, std::vector, std::vector, meep::grid_volume&, const meep::boundary_region&, const meep::symmetry&, int, double, bool, double, int, geometric_object_list, vector3, bool, meep_geom::material_type, meep_geom::absorber_list, meep_geom::material_type_list, bool, bool, meep::structure*, bool, const meep::binary_partition*)’: meep-python.cxx:7088:62: warning: unused parameter ‘alist’ [-Wunused-parameter] 7088 | meep_geom::absorber_list alist, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ meep-python.cxx:7089:67: warning: unused parameter ‘extra_materials’ [-Wunused-parameter] 7089 | meep_geom::material_type_list extra_materials, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ meep-python.cxx:7091:42: warning: unused parameter ‘set_materials’ [-Wunused-parameter] 7091 | bool set_materials, | ~~~~~^~~~~~~~~~~~~ meep-python.cxx: In function ‘meep_geom::geom_epsilon* _set_materials(meep::structure*, vector3, meep::grid_volume&, bool, double, int, geometric_object_list, vector3, bool, meep_geom::material_type, meep_geom::absorber_list, meep_geom::material_type_list, bool, bool, meep_geom::geom_epsilon*, bool, const meep::binary_partition*)’: meep-python.cxx:7135:29: warning: unused parameter ‘cell_size’ [-Wunused-parameter] 7135 | vector3 cell_size, | ~~~~~~~~^~~~~~~~~ meep-python.cxx:7136:40: warning: unused parameter ‘gv’ [-Wunused-parameter] 7136 | meep::grid_volume &gv, | ~~~~~~~~~~~~~~~~~~~^~ meep-python.cxx:7149:26: warning: unused parameter ‘output_chunk_costs’ [-Wunused-parameter] 7149 | bool output_chunk_costs, | ~~~~~^~~~~~~~~~~~~~~~~~ meep-python.cxx:7150:51: warning: unused parameter ‘my_bp’ [-Wunused-parameter] 7150 | const meep::binary_partition *my_bp) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ meep-python.cxx: In function ‘PyObject* _wrap_abort__varargs__(PyObject*, PyObject*, PyObject*)’: meep-python.cxx:22480:103: warning: unused parameter ‘varargs’ [-Wunused-parameter] 22480 | SWIGINTERN PyObject *_wrap_abort__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function ‘PyObject* _wrap_master_printf__varargs__(PyObject*, PyObject*, PyObject*)’: meep-python.cxx:118013:111: warning: unused parameter ‘varargs’ [-Wunused-parameter] 118013 | SWIGINTERN PyObject *_wrap_master_printf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function ‘PyObject* _wrap_master_printf_stderr__varargs__(PyObject*, PyObject*, PyObject*)’: meep-python.cxx:118059:118: warning: unused parameter ‘varargs’ [-Wunused-parameter] 118059 | SWIGINTERN PyObject *_wrap_master_printf_stderr__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function ‘PyObject* _wrap_debug_printf__varargs__(PyObject*, PyObject*, PyObject*)’: meep-python.cxx:118105:110: warning: unused parameter ‘varargs’ [-Wunused-parameter] 118105 | SWIGINTERN PyObject *_wrap_debug_printf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ meep-python.cxx: In function ‘PyObject* _wrap_master_fprintf__varargs__(PyObject*, PyObject*, PyObject*)’: meep-python.cxx:118151:112: warning: unused parameter ‘varargs’ [-Wunused-parameter] 118151 | SWIGINTERN PyObject *_wrap_master_fprintf__varargs__(PyObject *SWIGUNUSEDPARM(self), PyObject *args, PyObject *varargs) { | ~~~~~~~~~~^~~~~~~ In file included from meep-python.cxx:3541: typemap_utils.cpp: At global scope: typemap_utils.cpp:117:18: warning: ‘PyObject* py_volume_object()’ defined but not used [-Wunused-function] 117 | static PyObject *py_volume_object() { | ^~~~~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c meep-python.cxx -fPIC -DPIC -o _meep_la-meep-python.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -O3 -fstrict-aliasing -Wall -W -module -version-info 27:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o _meep.la -rpath /usr/lib/python3.9/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath libtool: link: x86_64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/11/crtbeginS.o .libs/_meep_la-meep-python.o -Wl,-rpath -Wl,/build/meep-qYdsD8/meep-1.22.0/src/.libs ../src/.libs/libmeep.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lquadmath -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/11/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crtn.o -O3 -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-soname -Wl,_meep.so.27 -o .libs/_meep.so.27.0.0 libtool: link: (cd ".libs" && rm -f "_meep.so.27" && ln -s "_meep.so.27.0.0" "_meep.so.27") libtool: link: (cd ".libs" && rm -f "_meep.so" && ln -s "_meep.so.27.0.0" "_meep.so") libtool: link: x86_64-linux-gnu-ar cr .libs/_meep.a _meep_la-meep-python.o libtool: link: x86_64-linux-gnu-ranlib .libs/_meep.a libtool: link: ( cd ".libs" && rm -f "_meep.la" && ln -s "../_meep.la" "_meep.la" ) /bin/bash ../libtool --tag=CXX --mode=compile x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c -o _mpb_la-mpb-python.lo `test -f 'mpb-python.cxx' || echo './'`mpb-python.cxx libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c mpb-python.cxx -fPIC -DPIC -o .libs/_mpb_la-mpb-python.o In file included from mpb-python.cxx:2852: typemap_utils.cpp:117:18: warning: ‘PyObject* py_volume_object()’ defined but not used [-Wunused-function] 117 | static PyObject *py_volume_object() { | ^~~~~~~~~~~~~~~~ libtool: compile: x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -I.. -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I../src -I../libpympb -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -pthread -I/usr/include/guile/2.2 -O3 -fstrict-aliasing -Wall -W -c mpb-python.cxx -fPIC -DPIC -o _mpb_la-mpb-python.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link x86_64-linux-gnu-g++ -O3 -fstrict-aliasing -Wall -W -module -version-info 27:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o _mpb.la -rpath /usr/lib/python3.9/site-packages/meep/mpb _mpb_la-mpb-python.lo ../libpympb/libpympb.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath libtool: link: x86_64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/11/crtbeginS.o .libs/_mpb_la-mpb-python.o -Wl,-rpath -Wl,/build/meep-qYdsD8/meep-1.22.0/libpympb/.libs ../libpympb/.libs/libpympb.so -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lquadmath -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/11/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crtn.o -O3 -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-soname -Wl,_mpb.so.27 -o .libs/_mpb.so.27.0.0 libtool: link: (cd ".libs" && rm -f "_mpb.so.27" && ln -s "_mpb.so.27.0.0" "_mpb.so.27") libtool: link: (cd ".libs" && rm -f "_mpb.so" && ln -s "_mpb.so.27.0.0" "_mpb.so") libtool: link: x86_64-linux-gnu-ar cr .libs/_mpb.a _mpb_la-mpb-python.o libtool: link: x86_64-linux-gnu-ranlib .libs/_mpb.a libtool: link: ( cd ".libs" && rm -f "_mpb.la" && ln -s "../_mpb.la" "_mpb.la" ) mkdir -p meep/adjoint cp __init__.py ./binary_partition_utils.py ./chunk_balancer.py ./geom.py ./simulation.py ./source.py ./timing_measurements.py ./visualization.py ./materials.py ./verbosity_mgr.py .libs/_meep.so meep cp ./adjoint/__init__.py ./adjoint/basis.py ./adjoint/objective.py ./adjoint/optimization_problem.py ./adjoint/filters.py ./adjoint/filter_source.py ./adjoint/connectivity.py ./adjoint/wrapper.py ./adjoint/utils.py meep/adjoint mkdir -p meep/mpb cp .libs/_mpb.so meep/mpb cp ./mpb.py meep/mpb/__init__.py cp ./solver.py ./mpb_data.py meep/mpb make[4]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/python' make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/python' make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0' cp -f ./meep-pkgconfig meep.pc make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0' make[2]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0' make[1]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with autoreconf dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/build/meep-qYdsD8/meep-1.22.0' dh_installchangelogs NEWS.md dh_auto_install make -j1 install DESTDIR=/build/meep-qYdsD8/meep-1.22.0/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/meep-qYdsD8/meep-1.22.0' Making install in src make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/src' make install-recursive make[4]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/src' Making install in support make[5]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/src/support' make[6]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/src/support' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/src/support' make[5]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/src/support' make[5]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/src' make[6]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/src' /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libmeep.la '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libmeep.so.27.0.0 /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.so.27.0.0 libtool: install: (cd /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libmeep.so.27.0.0 libmeep.so.27 || { rm -f libmeep.so.27 && ln -s libmeep.so.27.0.0 libmeep.so.27; }; }) libtool: install: (cd /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libmeep.so.27.0.0 libmeep.so || { rm -f libmeep.so && ln -s libmeep.so.27.0.0 libmeep.so; }; }) libtool: install: /usr/bin/install -c .libs/libmeep.lai /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.la libtool: install: /usr/bin/install -c .libs/libmeep.a /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.a libtool: install: chmod 644 /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.a libtool: install: x86_64-linux-gnu-ranlib /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/libmeep.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/include' /usr/bin/install -c -m 644 meep.hpp '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/include' /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/include/meep' /usr/bin/install -c -m 644 meep/mympi.hpp meep/vec.hpp meep/meep-config.h meepgeom.hpp material_data.hpp adjust_verbosity.hpp '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/include/meep' make[6]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/src' make[5]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/src' make[4]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/src' make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/src' Making install in tests make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/tests' make[4]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/tests' make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/tests' Making install in scheme make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/scheme' make install-am make[4]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/scheme' make[5]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/scheme' /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c meep '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/bin' libtool: warning: '../src/libmeep.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/meep /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/bin/meep /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/share/meep' /usr/bin/install -c -m 644 meep.scm meep-enums.scm casimir.scm materials.scm '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/share/meep' make[5]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/scheme' make[4]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/scheme' make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/scheme' Making install in libpympb make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/libpympb' make[4]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/libpympb' /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libpympb.la '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: warning: relinking 'libpympb.la' libtool: install: (cd /build/meep-qYdsD8/meep-1.22.0/libpympb; /bin/bash "/build/meep-qYdsD8/meep-1.22.0/libtool" --tag CXX --mode=relink x86_64-linux-gnu-g++ -O3 -fstrict-aliasing -Wall -W -version-info 27:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o libpympb.la -rpath /usr/lib/x86_64-linux-gnu libpympb_la-pympb.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath -inst-prefix-dir /build/meep-qYdsD8/meep-1.22.0/debian/tmp) libtool: relink: x86_64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/11/crtbeginS.o .libs/libpympb_la-pympb.o -L/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lmeep -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lquadmath -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/11/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crtn.o -O3 -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-soname -Wl,libpympb.so.27 -o .libs/libpympb.so.27.0.0 libtool: install: /usr/bin/install -c .libs/libpympb.so.27.0.0T /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/libpympb.so.27.0.0 libtool: install: (cd /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libpympb.so.27.0.0 libpympb.so.27 || { rm -f libpympb.so.27 && ln -s libpympb.so.27.0.0 libpympb.so.27; }; }) libtool: install: (cd /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libpympb.so.27.0.0 libpympb.so || { rm -f libpympb.so && ln -s libpympb.so.27.0.0 libpympb.so; }; }) libtool: install: /usr/bin/install -c .libs/libpympb.lai /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/libpympb.la libtool: install: /usr/bin/install -c .libs/libpympb.a /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/libpympb.a libtool: install: chmod 644 /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/libpympb.a libtool: install: x86_64-linux-gnu-ranlib /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/libpympb.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/include/meep' /usr/bin/install -c -m 644 pympb.hpp '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/include/meep' make[4]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/libpympb' make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/libpympb' Making install in python make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/python' make install-am make[4]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/python' make[5]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/python' /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep' /bin/bash ../libtool --mode=install /usr/bin/install -c _meep.la '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep' libtool: warning: relinking '_meep.la' libtool: install: (cd /build/meep-qYdsD8/meep-1.22.0/python; /bin/bash "/build/meep-qYdsD8/meep-1.22.0/libtool" --tag CXX --mode=relink x86_64-linux-gnu-g++ -O3 -fstrict-aliasing -Wall -W -module -version-info 27:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o _meep.la -rpath /usr/lib/python3.9/site-packages/meep _meep_la-meep-python.lo ../src/libmeep.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath -inst-prefix-dir /build/meep-qYdsD8/meep-1.22.0/debian/tmp) libtool: relink: x86_64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/11/crtbeginS.o .libs/_meep_la-meep-python.o -L/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lmeep -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lquadmath -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/11/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crtn.o -O3 -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-soname -Wl,_meep.so.27 -o .libs/_meep.so.27.0.0 libtool: install: /usr/bin/install -c .libs/_meep.so.27.0.0T /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.so.27.0.0 libtool: install: (cd /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep && { ln -s -f _meep.so.27.0.0 _meep.so.27 || { rm -f _meep.so.27 && ln -s _meep.so.27.0.0 _meep.so.27; }; }) libtool: install: (cd /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep && { ln -s -f _meep.so.27.0.0 _meep.so || { rm -f _meep.so && ln -s _meep.so.27.0.0 _meep.so; }; }) libtool: install: /usr/bin/install -c .libs/_meep.lai /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.la libtool: install: /usr/bin/install -c .libs/_meep.a /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.a libtool: install: chmod 644 /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.a libtool: install: x86_64-linux-gnu-ranlib /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/_meep.a libtool: warning: remember to run 'libtool --finish /usr/lib/python3.9/site-packages/meep' /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint' /usr/bin/install -c -m 644 ./adjoint/__init__.py ./adjoint/basis.py ./adjoint/objective.py ./adjoint/optimization_problem.py ./adjoint/filters.py ./adjoint/filter_source.py ./adjoint/connectivity.py ./adjoint/wrapper.py ./adjoint/utils.py '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/adjoint' Byte-compiling python modules... __init__.pybasis.pyobjective.pyoptimization_problem.pyfilters.pyfilter_source.pyconnectivity.pywrapper.pyutils.py Byte-compiling python modules (optimized versions) ... __init__.pybasis.pyobjective.pyoptimization_problem.pyfilters.pyfilter_source.pyconnectivity.pywrapper.pyutils.py /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep' /usr/bin/install -c -m 644 __init__.py ./binary_partition_utils.py ./chunk_balancer.py ./geom.py ./simulation.py ./source.py ./timing_measurements.py ./visualization.py ./materials.py ./verbosity_mgr.py '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep' Byte-compiling python modules... __init__.pybinary_partition_utils.pychunk_balancer.pygeom.pysimulation.pysource.pytiming_measurements.pyvisualization.pymaterials.pyverbosity_mgr.py Byte-compiling python modules (optimized versions) ... __init__.pybinary_partition_utils.pychunk_balancer.pygeom.pysimulation.pysource.pytiming_measurements.pyvisualization.pymaterials.pyverbosity_mgr.py /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb' /bin/bash ../libtool --mode=install /usr/bin/install -c _mpb.la '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb' libtool: warning: relinking '_mpb.la' libtool: install: (cd /build/meep-qYdsD8/meep-1.22.0/python; /bin/bash "/build/meep-qYdsD8/meep-1.22.0/libtool" --tag CXX --mode=relink x86_64-linux-gnu-g++ -O3 -fstrict-aliasing -Wall -W -module -version-info 27:0:0 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -o _mpb.la -rpath /usr/lib/python3.9/site-packages/meep/mpb _mpb_la-mpb-python.lo ../libpympb/libpympb.la -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas -lm -lmpb -lharminv -llapack -lblas -lfftw3 -lm -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lm -lquadmath -inst-prefix-dir /build/meep-qYdsD8/meep-1.22.0/debian/tmp) libtool: relink: x86_64-linux-gnu-g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/11/crtbeginS.o .libs/_mpb_la-mpb-python.o -L/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -lpympb -lGDSII -lctlgeom -lhdf5 -lz -lgsl -lgslcblas /usr/lib/libmpb.a -lharminv -llapack -lblas -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lfftw3 -lgfortran -lquadmath -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/11/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crtn.o -O3 -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -Wl,-soname -Wl,_mpb.so.27 -o .libs/_mpb.so.27.0.0 libtool: install: /usr/bin/install -c .libs/_mpb.so.27.0.0T /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb/_mpb.so.27.0.0 libtool: install: (cd /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb && { ln -s -f _mpb.so.27.0.0 _mpb.so.27 || { rm -f _mpb.so.27 && ln -s _mpb.so.27.0.0 _mpb.so.27; }; }) libtool: install: (cd /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb && { ln -s -f _mpb.so.27.0.0 _mpb.so || { rm -f _mpb.so && ln -s _mpb.so.27.0.0 _mpb.so; }; }) libtool: install: /usr/bin/install -c .libs/_mpb.lai /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb/_mpb.la libtool: install: /usr/bin/install -c .libs/_mpb.a /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb/_mpb.a libtool: install: chmod 644 /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb/_mpb.a libtool: install: x86_64-linux-gnu-ranlib /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb/_mpb.a libtool: warning: remember to run 'libtool --finish /usr/lib/python3.9/site-packages/meep/mpb' /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb' /usr/bin/install -c -m 644 mpb.py solver.py mpb_data.py '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb' Byte-compiling python modules... mpb.pysolver.pympb_data.py Byte-compiling python modules (optimized versions) ... mpb.pysolver.pympb_data.py make install-data-hook make[6]: Entering directory '/build/meep-qYdsD8/meep-1.22.0/python' mv /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb/mpb.py /build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/python3.9/site-packages/meep/mpb/__init__.py make[6]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/python' make[5]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/python' make[4]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/python' make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0/python' make[3]: Entering directory '/build/meep-qYdsD8/meep-1.22.0' make[4]: Entering directory '/build/meep-qYdsD8/meep-1.22.0' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 meep.pc '/build/meep-qYdsD8/meep-1.22.0/debian/tmp/usr/lib/x86_64-linux-gnu/pkgconfig' make[4]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0' make[3]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0' make[2]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0' rm -f -f debian/tmp/usr/lib/python*/site-packages/meep/adjoint/*.pyc rm -f -f debian/tmp/usr/lib/python*/site-packages/meep/adjoint/*.pyo rm -f -f debian/tmp/usr/lib/python*/site-packages/meep/*.pyc rm -f -f debian/tmp/usr/lib/python*/site-packages/meep/*.pyo rm -f -f debian/tmp/usr/lib/python*/site-packages/meep/*.a rm -f -f debian/tmp/usr/lib/python*/site-packages/meep/*.la rm -f -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.pyc rm -f -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.pyo rm -f -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.a rm -f -f debian/tmp/usr/lib/python*/site-packages/meep/mpb/*.la rm -f -f debian/tmp/usr/lib/*/libpympb.la rm -f -f debian/tmp/usr/lib/*/libmeep.la rm -f -rf debian/tmp/usr/lib/python*/site-packages/meep/__pycache__/ rm -f -rf debian/tmp/usr/lib/python*/site-packages/meep/adjoint/__pycache__/ rm -f -rf debian/tmp/usr/lib/python*/site-packages/meep/mpb/__pycache__/ make[1]: Leaving directory '/build/meep-qYdsD8/meep-1.22.0' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dwz: debian/meep/usr/bin/meep: .debug_info section not present dwz: debian/libmeep27/usr/lib/x86_64-linux-gnu/libpympb.so.27.0.0: .debug_info section not present dwz: Too few files for multifile optimization dh_dwz: warning: No dwz multifile created, but not explicitly requested either so ignoring it. dh_dwz: warning: Common issues include no debug information at all (missing -g) and dh_dwz: warning: compressed debug information (#931891). dwz: debian/python3-meep/usr/lib/python3/dist-packages/meep/_meep.so.27.0.0: .debug_info section not present dwz: debian/python3-meep/usr/lib/python3/dist-packages/meep/mpb/_mpb.so.27.0.0: .debug_info section not present dwz: Too few files for multifile optimization dh_dwz: warning: No dwz multifile created, but not explicitly requested either so ignoring it. dh_dwz: warning: Common issues include no debug information at all (missing -g) and dh_dwz: warning: compressed debug information (#931891). dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: debian/python3-meep/usr/lib/python3/dist-packages/meep/_meep.so.27.0.0 contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 107 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-meep/usr/lib/python3/dist-packages/meep/mpb/_mpb.so.27.0.0 contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin dpkg-shlibdeps: warning: 99 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'meep' in '../meep_1.22.0-2_amd64.deb'. dpkg-deb: building package 'meep-dbgsym' in '../meep-dbgsym_1.22.0-2_amd64.deb'. dpkg-deb: building package 'libmeep27' in '../libmeep27_1.22.0-2_amd64.deb'. dpkg-deb: building package 'libmeep27-dbgsym' in '../libmeep27-dbgsym_1.22.0-2_amd64.deb'. dpkg-deb: building package 'libmeep-dev' in '../libmeep-dev_1.22.0-2_amd64.deb'. dpkg-deb: building package 'python3-meep' in '../python3-meep_1.22.0-2_amd64.deb'. dpkg-deb: building package 'python3-meep-dbgsym' in '../python3-meep-dbgsym_1.22.0-2_amd64.deb'. dpkg-genbuildinfo --build=any -O../meep_1.22.0-2_amd64.buildinfo dpkg-genchanges --build=any -O../meep_1.22.0-2_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/meep-qYdsD8 /tmp/meep-1.22.0-2t99au9po I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.W95d6O6CsX... I: success in 1502.1408 seconds md5: libmeep-dev_1.22.0-2_amd64.deb: OK md5: libmeep27-dbgsym_1.22.0-2_amd64.deb: OK md5: libmeep27_1.22.0-2_amd64.deb: OK md5: meep-dbgsym_1.22.0-2_amd64.deb: OK md5: meep_1.22.0-2_amd64.deb: OK md5: python3-meep-dbgsym_1.22.0-2_amd64.deb: OK md5: python3-meep_1.22.0-2_amd64.deb: OK sha1: libmeep-dev_1.22.0-2_amd64.deb: OK sha1: libmeep27-dbgsym_1.22.0-2_amd64.deb: OK sha1: libmeep27_1.22.0-2_amd64.deb: OK sha1: meep-dbgsym_1.22.0-2_amd64.deb: OK sha1: meep_1.22.0-2_amd64.deb: OK sha1: python3-meep-dbgsym_1.22.0-2_amd64.deb: OK sha1: python3-meep_1.22.0-2_amd64.deb: OK sha256: libmeep-dev_1.22.0-2_amd64.deb: OK sha256: libmeep27-dbgsym_1.22.0-2_amd64.deb: OK sha256: libmeep27_1.22.0-2_amd64.deb: OK sha256: meep-dbgsym_1.22.0-2_amd64.deb: OK sha256: meep_1.22.0-2_amd64.deb: OK sha256: python3-meep-dbgsym_1.22.0-2_amd64.deb: OK sha256: python3-meep_1.22.0-2_amd64.deb: OK Checksums: OK