Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/l/ltrsift/ltrsift_1.0.2-9_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/ltrsift-1.0.2-9levax9vw/ltrsift_1.0.2-9_amd64.buildinfo Get source package info: ltrsift=1.0.2-9 Source URL: http://snapshot.notset.fr/mr/package/ltrsift/1.0.2-9/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=adwaita-icon-theme=3.36.0-1 autoconf=2.69-11.1 automake=1:1.16.2-1 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.47 bash=5.0-6 binutils=2.34-6 binutils-common=2.34-6 binutils-x86-64-linux-gnu=2.34-6 bsdmainutils=11.1.2+b1 bsdutils=1:2.34-0.1 build-essential=12.8 bzip2=1.0.8-2 coreutils=8.30-3+b1 cpp=4:9.2.1-3.1 cpp-9=9.3.0-10 dash=0.5.10.2-7 debconf=1.5.73 debhelper=13 debianutils=4.9.1 dh-autoreconf=19 dh-strip-nondeterminism=1.8.0-1 diffutils=1:3.7-3 dpkg=1.19.7 dpkg-dev=1.19.7 dwz=0.13-5 fdisk=2.34-0.1 file=1:5.38-4 findutils=4.7.0-1 fontconfig=2.13.1-3 fontconfig-config=2.13.1-3 fonts-dejavu-core=2.37-1 g++=4:9.2.1-3.1 g++-9=9.3.0-10 gcc=4:9.2.1-3.1 gcc-10-base=10-20200411-1 gcc-9=9.3.0-10 gcc-9-base=9.3.0-10 genometools-common=1.6.1+ds-2 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 gir1.2-atk-1.0=2.36.0-2 gir1.2-freedesktop=1.64.1-1 gir1.2-gdkpixbuf-2.0=2.40.0+dfsg-4 gir1.2-glib-2.0=1.64.1-1 gir1.2-gtk-2.0=2.24.32-4 gir1.2-harfbuzz-0.0=2.6.4-1 gir1.2-pango-1.0=1.44.7-4 grep=3.4-1 groff-base=1.22.4-4 gtk-update-icon-cache=3.24.18-1 gzip=1.10-2 hicolor-icon-theme=0.17-2 hostname=3.23 icu-devtools=63.2-3 init-system-helpers=1.57 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-6 libarchive-zip-perl=1.68-1 libasan5=9.3.0-10 libatk1.0-0=2.36.0-2 libatk1.0-data=2.36.0-2 libatk1.0-dev=2.36.0-2 libatomic1=10-20200411-1 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3 libaudit1=1:2.8.5-3+b1 libavahi-client3=0.7-5 libavahi-common-data=0.7-5 libavahi-common3=0.7-5 libbinutils=2.34-6 libblkid-dev=2.34-0.1 libblkid1=2.34-0.1 libbsd0=0.10.0-1 libbz2-1.0=1.0.8-2 libc-bin=2.30-4 libc-dev-bin=2.30-4 libc6=2.30-4 libc6-dev=2.30-4 libcairo-gobject2=1.16.0-4 libcairo-script-interpreter2=1.16.0-4 libcairo2=1.16.0-4 libcairo2-dev=1.16.0-4 libcap-ng0=0.7.9-2.1+b2 libcc1-0=10-20200411-1 libcom-err2=1.45.6-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.16-1 libcrypt1=1:4.4.16-1 libctf-nobfd0=2.34-6 libctf0=2.34-6 libcups2=2.3.1-11 libdatrie-dev=0.2.12-3 libdatrie1=0.2.12-3 libdb5.3=5.3.28+dfsg1-0.6 libdbus-1-3=1.12.16-2 libdebconfclient0=0.251 libdebhelper-perl=13 libdpkg-perl=1.19.7 libelf1=0.176-1.1 libexpat1=2.2.9-1 libexpat1-dev=2.2.9-1 libfdisk1=2.34-0.1 libffi-dev=3.3-4 libffi7=3.3-4 libfile-stripnondeterminism-perl=1.8.0-1 libfontconfig-dev=2.13.1-3 libfontconfig1=2.13.1-3 libfontconfig1-dev=2.13.1-3 libfreetype-dev=2.10.1-2 libfreetype6=2.10.1-2 libfreetype6-dev=2.10.1-2 libfribidi-dev=1.0.8-2 libfribidi0=1.0.8-2 libgcc-9-dev=9.3.0-10 libgcc-s1=10-20200411-1 libgcrypt20=1.8.5-5 libgdbm-compat4=1.18.1-5 libgdbm6=1.18.1-5 libgdk-pixbuf2.0-0=2.40.0+dfsg-4 libgdk-pixbuf2.0-bin=2.40.0+dfsg-4 libgdk-pixbuf2.0-common=2.40.0+dfsg-4 libgdk-pixbuf2.0-dev=2.40.0+dfsg-4 libgenometools0=1.6.1+ds-2 libgenometools0-dev=1.6.1+ds-2 libgirepository-1.0-1=1.64.1-1 libglib2.0-0=2.64.2-1 libglib2.0-bin=2.64.2-1 libglib2.0-data=2.64.2-1 libglib2.0-dev=2.64.2-1 libglib2.0-dev-bin=2.64.2-1 libgmp10=2:6.2.0+dfsg-4 libgnutls30=3.6.13-2 libgomp1=10-20200411-1 libgpg-error0=1.37-1 libgraphite2-3=1.3.14-1 libgraphite2-dev=1.3.14-1 libgssapi-krb5-2=1.17-7 libgtk2.0-0=2.24.32-4 libgtk2.0-common=2.24.32-4 libgtk2.0-dev=2.24.32-4 libharfbuzz-dev=2.6.4-1 libharfbuzz-gobject0=2.6.4-1 libharfbuzz-icu0=2.6.4-1 libharfbuzz0b=2.6.4-1 libhogweed5=3.5.1+really3.5.1-2 libice-dev=2:1.0.9-2 libice6=2:1.0.9-2 libicu-dev=63.2-3 libicu63=63.2-3 libidn2-0=2.3.0-1 libisl22=0.22.1-1 libitm1=10-20200411-1 libjbig0=2.1-3.1+b2 libjpeg62-turbo=1:1.5.2-2+b1 libk5crypto3=1.17-7 libkeyutils1=1.6.1-2 libkrb5-3=1.17-7 libkrb5support0=1.17-7 liblsan0=10-20200411-1 liblua5.1-0=5.1.5-8.1+b3 liblz4-1=1.9.2-2 liblzma5=5.2.4-1+b1 liblzo2-2=2.10-2 libmagic-mgc=1:5.38-4 libmagic1=1:5.38-4 libmount-dev=2.34-0.1 libmount1=2.34-0.1 libmpc3=1.1.0-1 libmpdec2=2.4.2-3 libmpfr6=4.0.2-1 libncursesw6=6.2-1 libnettle7=3.5.1+really3.5.1-2 libp11-kit0=0.23.20-1 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpango-1.0-0=1.44.7-4 libpango1.0-dev=1.44.7-4 libpangocairo-1.0-0=1.44.7-4 libpangoft2-1.0-0=1.44.7-4 libpangoxft-1.0-0=1.44.7-4 libpcre16-3=2:8.39-12+b1 libpcre2-16-0=10.34-7 libpcre2-32-0=10.34-7 libpcre2-8-0=10.34-7 libpcre2-dev=10.34-7 libpcre2-posix2=10.34-7 libpcre3=2:8.39-12+b1 libpcre3-dev=2:8.39-12+b1 libpcre32-3=2:8.39-12+b1 libpcrecpp0v5=2:8.39-12+b1 libperl5.30=5.30.0-10 libpipeline1=1.5.2-2 libpixman-1-0=0.36.0-1 libpixman-1-dev=0.36.0-1 libpng-dev=1.6.37-2 libpng16-16=1.6.37-2 libpth20=2.0.7-22 libpthread-stubs0-dev=0.4-1 libpython3-stdlib=3.8.2-3 libpython3.8-minimal=3.8.2-1+b1 libpython3.8-stdlib=3.8.2-1+b1 libquadmath0=10-20200411-1 libreadline8=8.0-4 librsvg2-2=2.48.2-1 librsvg2-common=2.48.2-1 libseccomp2=2.4.3-1+b1 libselinux1=3.0-1+b3 libselinux1-dev=3.0-1+b3 libsepol1=3.0-1 libsepol1-dev=3.0-1 libsigsegv2=2.12-2 libsm-dev=2:1.2.3-1 libsm6=2:1.2.3-1 libsmartcols1=2.34-0.1 libsqlite3-0=3.31.1-5 libssl1.1=1.1.1f-1 libstdc++-9-dev=9.3.0-10 libstdc++6=10-20200411-1 libsub-override-perl=0.09-2 libsystemd0=245.4-4 libtasn1-6=4.16.0-2 libthai-data=0.1.28-3 libthai-dev=0.1.28-3 libthai0=0.1.28-3 libtiff5=4.1.0+git191117-2 libtinfo6=6.2-1 libtool=2.4.6-14 libtre5=0.8.0-6+b1 libtsan0=10-20200411-1 libubsan1=10-20200411-1 libuchardet0=0.0.6-3 libudev1=245.4-4 libunistring2=0.9.10-2 libuuid1=2.34-0.1 libwebp6=0.6.1-2+b1 libx11-6=2:1.6.9-2 libx11-data=2:1.6.9-2 libx11-dev=2:1.6.9-2 libxau-dev=1:1.0.8-1+b2 libxau6=1:1.0.8-1+b2 libxcb-render0=1.14-2 libxcb-render0-dev=1.14-2 libxcb-shm0=1.14-2 libxcb-shm0-dev=1.14-2 libxcb1=1.14-2 libxcb1-dev=1.14-2 libxcomposite-dev=1:0.4.5-1 libxcomposite1=1:0.4.5-1 libxcursor-dev=1:1.2.0-2 libxcursor1=1:1.2.0-2 libxdamage-dev=1:1.1.5-2 libxdamage1=1:1.1.5-2 libxdmcp-dev=1:1.1.2-3 libxdmcp6=1:1.1.2-3 libxext-dev=2:1.3.3-1+b2 libxext6=2:1.3.3-1+b2 libxfixes-dev=1:5.0.3-2 libxfixes3=1:5.0.3-2 libxft-dev=2.3.2-2 libxft2=2.3.2-2 libxi-dev=2:1.7.9-1 libxi6=2:1.7.9-1 libxinerama-dev=2:1.1.4-2 libxinerama1=2:1.1.4-2 libxml2=2.9.10+dfsg-5 libxml2-utils=2.9.10+dfsg-5 libxrandr-dev=2:1.5.1-1 libxrandr2=2:1.5.1-1 libxrender-dev=1:0.9.10-1 libxrender1=1:0.9.10-1 libzstd1=1.4.4+dfsg-3 linux-libc-dev=5.5.17-1 login=1:4.8.1-1 lsb-base=11.1.0 lua-md5=1.2+git+1+8d87fee-1.1 m4=1.4.18-4 make=4.2.1-1.2 man-db=2.9.1-1 mawk=1.3.4.20200120-2 mime-support=3.64 ncurses-base=6.2-1 ncurses-bin=6.2-1 pango1.0-tools=1.44.7-4 patch=2.7.6-6 perl=5.30.0-10 perl-base=5.30.0-10 perl-modules-5.30=5.30.0-10 pkg-config=0.29-6 po-debconf=1.0.21 python3=3.8.2-3 python3-distutils=3.8.2-2 python3-lib2to3=3.8.2-2 python3-minimal=3.8.2-3 python3.8=3.8.2-1+b1 python3.8-minimal=3.8.2-1+b1 readline-common=8.0-4 sed=4.7-1 sensible-utils=0.0.12+nmu1 shared-mime-info=1.15-1 sysvinit-utils=2.96-3 tar=1.30+dfsg-7 ucf=3.0038+nmu1 util-linux=2.34-0.1 uuid-dev=2.34-0.1 x11-common=1:7.7+20 x11proto-core-dev=2020.1-1 x11proto-dev=2020.1-1 x11proto-input-dev=2020.1-1 x11proto-randr-dev=2020.1-1 x11proto-xext-dev=2020.1-1 x11proto-xinerama-dev=2020.1-1 xorg-sgml-doctools=1:1.11-1 xtrans-dev=1.4.0-1 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20200418T085038Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d ltrsift=1.0.2-9 && mkdir -p /build/ltrsift-OESf5y && dpkg-source --no-check -x /*.dsc /build/ltrsift-OESf5y/ltrsift-1.0.2 && chown -R builduser:builduser /build/ltrsift-OESf5y" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/ltrsift-OESf5y/ltrsift-1.0.2 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1587211095" dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/ltrsift-OESf5y /tmp/ltrsift-1.0.2-9levax9vw bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20200418T085038Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.LuTJ9cBvZZ as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.LuTJ9cBvZZ Reading package lists... Building dependency tree... util-linux is already the newest version (2.34-0.1). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 132 kB of archives. After this operation, 393 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20200418T085038Z unstable/main amd64 libfakeroot amd64 1.24-1 [45.7 kB] Get:2 http://snapshot.notset.fr/archive/debian/20200418T085038Z unstable/main amd64 fakeroot amd64 1.24-1 [85.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 132 kB in 0s (717 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4504 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.24-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.24-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.24-1_amd64.deb ... Unpacking fakeroot (1.24-1) ... Setting up libfakeroot:amd64 (1.24-1) ... Setting up fakeroot (1.24-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.30-4) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20200418T085038Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.LuTJ9cBvZZ Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20200418T085038Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 20s (1147 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.LuTJ9cBvZZ I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d ltrsift=1.0.2-9 && mkdir -p /build/ltrsift-OESf5y && dpkg-source --no-check -x /*.dsc /build/ltrsift-OESf5y/ltrsift-1.0.2 && chown -R builduser:builduser /build/ltrsift-OESf5y"' exec /tmp/mmdebstrap.LuTJ9cBvZZ Reading package lists... NOTICE: 'ltrsift' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/ltrsift.git Please use: git clone https://salsa.debian.org/med-team/ltrsift.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 7316 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main ltrsift 1.0.2-9 (dsc) [1995 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main ltrsift 1.0.2-9 (tar) [7302 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main ltrsift 1.0.2-9 (diff) [12.0 kB] Fetched 7316 kB in 6s (1264 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'ltrsift_1.0.2-9.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting ltrsift in /build/ltrsift-OESf5y/ltrsift-1.0.2 dpkg-source: info: unpacking ltrsift_1.0.2.orig.tar.gz dpkg-source: info: unpacking ltrsift_1.0.2-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying build_on_64bit dpkg-source: info: applying use_deterministic_file_order dpkg-source: info: applying spelling.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/ltrsift-OESf5y/ltrsift-1.0.2 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1587211095" dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.LuTJ9cBvZZ dpkg-buildpackage: info: source package ltrsift dpkg-buildpackage: info: source version 1.0.2-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Sascha Steinbiss dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' /usr/bin/make cleanup make[2]: Entering directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' rm -rf obj rm -rf bin sample_data/ltrsift_encode sample_data/ltrsift_encode_static make[2]: Leaving directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' make[1]: Leaving directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' dh_auto_build -- x32=no 64bit=yes errorcheck=no make -j4 "INSTALL=install --strip-program=true" x32=no 64bit=yes errorcheck=no make[2]: Entering directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' [create bin] test -d bin || mkdir -p bin [create obj] test -d obj || mkdir -p obj [create obj/src] test -d obj/src || mkdir -p obj/src [compile obj/src/default_style.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/default_style.c -o obj/src/default_style.o [compile obj/src/error.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/error.c -o obj/src/error.o [compile obj/src/gtk_blastn_params.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_blastn_params.c -o obj/src/gtk_blastn_params.o [compile obj/src/gtk_blastn_params_refseq.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_blastn_params_refseq.c -o obj/src/gtk_blastn_params_refseq.o [compile obj/src/gtk_label_close.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_label_close.c -o obj/src/gtk_label_close.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, from src/error.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/error.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/gtk_blastn_params.h:24, from src/gtk_blastn_params.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from src/gtk_blastn_params.h:23, from src/gtk_blastn_params.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/gtk_blastn_params.h:24, from src/gtk_blastn_params.c:19: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from src/gtk_blastn_params.h:22, from src/gtk_blastn_params.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, from src/error.c:19: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/error.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/gtk_blastn_params_refseq.h:24, from src/gtk_blastn_params_refseq.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from src/gtk_blastn_params_refseq.h:23, from src/gtk_blastn_params_refseq.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/gtk_blastn_params_refseq.h:24, from src/gtk_blastn_params_refseq.c:19: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from src/gtk_blastn_params_refseq.h:22, from src/gtk_blastn_params_refseq.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/gtk_label_close.h:24, from src/gtk_label_close.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from src/gtk_label_close.h:23, from src/gtk_label_close.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ [compile obj/src/gtk_ltr_assistant.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_ltr_assistant.c -o obj/src/gtk_ltr_assistant.o In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/gtk_label_close.h:24, from src/gtk_label_close.c:19: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from src/gtk_label_close.h:22, from src/gtk_label_close.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ [compile obj/src/gtk_ltr_families.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_ltr_families.c -o obj/src/gtk_ltr_families.o [compile obj/src/gtk_ltr_filter.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_ltr_filter.c -o obj/src/gtk_ltr_filter.o [compile obj/src/gtk_project_settings.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_project_settings.c -o obj/src/gtk_project_settings.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from src/gtk_ltr_assistant.h:23, from src/gtk_ltr_assistant.c:20: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from src/gtk_ltr_assistant.h:22, from src/gtk_ltr_assistant.c:20: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_filter.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_filter.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ src/gtk_ltr_assistant.c: In function ‘gtk_ltr_assistant_get_match_params’: src/gtk_ltr_assistant.c:853:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] 853 | sprintf(last_call, "%s -x %d", last_call, xgapped); | ^~~~~~~~~ ~~~~~~~~~ src/gtk_ltr_assistant.c:855:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] 855 | sprintf(last_call, "%s -z %d", last_call, xfinal); | ^~~~~~~~~ ~~~~~~~~~ src/gtk_ltr_assistant.c:857:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] 857 | sprintf(last_call, "%s -y %d", last_call, xgapless); | ^~~~~~~~~ ~~~~~~~~~ src/gtk_ltr_assistant.c:859:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] 859 | sprintf(last_call, "%s -e %d", last_call, mscoregapped); | ^~~~~~~~~ ~~~~~~~~~ src/gtk_ltr_assistant.c:861:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] 861 | sprintf(last_call, "%s -d %d", last_call, mscoregapless); | ^~~~~~~~~ ~~~~~~~~~ src/gtk_ltr_assistant.c:864:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] 864 | sprintf(last_call, "%s -a %d", last_call, gapopen); | ^~~~~~~~~ ~~~~~~~~~ src/gtk_ltr_assistant.c:866:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] 866 | sprintf(last_call, "%s -b %d", last_call, gapextend); | ^~~~~~~~~ ~~~~~~~~~ src/gtk_ltr_assistant.c:868:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] 868 | sprintf(last_call, "%s -r %d", last_call, matchscore); | ^~~~~~~~~ ~~~~~~~~~ src/gtk_ltr_assistant.c:870:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] 870 | sprintf(last_call, "%s -q %d", last_call, mismatchcost); | ^~~~~~~~~ ~~~~~~~~~ src/gtk_ltr_assistant.c:872:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] 872 | sprintf(last_call, "%s -k %d", last_call, stepsize); | ^~~~~~~~~ ~~~~~~~~~ src/gtk_ltr_assistant.c:889:13: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict] 889 | sprintf(last_call, "%s %s", last_call, morelast); | ^~~~~~~~~ ~~~~~~~~~ In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_families.c:20: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_families.c:20: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_project_settings.c:20: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_project_settings.c:20: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_filter.c:19: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_filter.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_families.c:20: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_families.c:20: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_project_settings.c:20: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_project_settings.c:20: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ src/gtk_ltr_families.c: In function ‘gtk_ltr_families_refseq_match’: src/gtk_ltr_families.c:1551:3: warning: ‘g_thread_create’ is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] 1551 | if (!g_thread_create(refseq_match_cands_start, (gpointer) threaddata, FALSE, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_families.c:20: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ src/gtk_ltr_families.c: In function ‘gtk_ltr_families_orffind’: src/gtk_ltr_families.c:1648:3: warning: ‘g_thread_create’ is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] 1648 | if (!g_thread_create(orffind_start, (gpointer) threaddata, FALSE, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_families.c:20: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ src/gtk_ltr_families.c: In function ‘notebook_toolbar_search_cand_group_clicked’: src/gtk_ltr_families.c:2873:3: warning: ‘g_thread_create’ is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] 2873 | if (!g_thread_create(classify_nodes_start, (gpointer) threaddata, FALSE, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_families.c:20: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ [compile obj/src/menubar.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/menubar.c -o obj/src/menubar.o [compile obj/src/preprocess_stream.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/preprocess_stream.c -o obj/src/preprocess_stream.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, from src/menubar.c:20: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/menubar.c:20: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ src/gtk_ltr_assistant.c:853:27: warning: ‘ -x ’ directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 853 | sprintf(last_call, "%s -x %d", last_call, xgapped); | ^~~~ src/gtk_ltr_assistant.c:853:24: note: directive argument in the range [-2147483647, 2147483647] 853 | sprintf(last_call, "%s -x %d", last_call, xgapped); | ^~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/pango-1.0/pango/pango-utils.h:25, from /usr/include/pango-1.0/pango/pango.h:47, from /usr/include/gtk-2.0/gdk/gdktypes.h:37, from /usr/include/gtk-2.0/gdk/gdkscreen.h:32, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 6 and 8207 bytes into a destination of size 8192 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gtk_ltr_assistant.c:855:27: warning: ‘ -z ’ directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 855 | sprintf(last_call, "%s -z %d", last_call, xfinal); | ^~~~ src/gtk_ltr_assistant.c:855:24: note: directive argument in the range [-2147483647, 2147483647] 855 | sprintf(last_call, "%s -z %d", last_call, xfinal); | ^~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/pango-1.0/pango/pango-utils.h:25, from /usr/include/pango-1.0/pango/pango.h:47, from /usr/include/gtk-2.0/gdk/gdktypes.h:37, from /usr/include/gtk-2.0/gdk/gdkscreen.h:32, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 6 and 8207 bytes into a destination of size 8192 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gtk_ltr_assistant.c:857:27: warning: ‘ -y ’ directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 857 | sprintf(last_call, "%s -y %d", last_call, xgapless); | ^~~~ src/gtk_ltr_assistant.c:857:24: note: directive argument in the range [-2147483647, 2147483647] 857 | sprintf(last_call, "%s -y %d", last_call, xgapless); | ^~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/pango-1.0/pango/pango-utils.h:25, from /usr/include/pango-1.0/pango/pango.h:47, from /usr/include/gtk-2.0/gdk/gdktypes.h:37, from /usr/include/gtk-2.0/gdk/gdkscreen.h:32, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 6 and 8207 bytes into a destination of size 8192 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gtk_ltr_assistant.c:859:27: warning: ‘ -e ’ directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 859 | sprintf(last_call, "%s -e %d", last_call, mscoregapped); | ^~~~ src/gtk_ltr_assistant.c:859:24: note: directive argument in the range [-2147483647, 2147483647] 859 | sprintf(last_call, "%s -e %d", last_call, mscoregapped); | ^~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/pango-1.0/pango/pango-utils.h:25, from /usr/include/pango-1.0/pango/pango.h:47, from /usr/include/gtk-2.0/gdk/gdktypes.h:37, from /usr/include/gtk-2.0/gdk/gdkscreen.h:32, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 6 and 8207 bytes into a destination of size 8192 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gtk_ltr_assistant.c:861:27: warning: ‘ -d ’ directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 861 | sprintf(last_call, "%s -d %d", last_call, mscoregapless); | ^~~~ src/gtk_ltr_assistant.c:861:24: note: directive argument in the range [-2147483647, 2147483647] 861 | sprintf(last_call, "%s -d %d", last_call, mscoregapless); | ^~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/pango-1.0/pango/pango-utils.h:25, from /usr/include/pango-1.0/pango/pango.h:47, from /usr/include/gtk-2.0/gdk/gdktypes.h:37, from /usr/include/gtk-2.0/gdk/gdkscreen.h:32, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 6 and 8207 bytes into a destination of size 8192 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gtk_ltr_assistant.c:864:27: warning: ‘ -a ’ directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 864 | sprintf(last_call, "%s -a %d", last_call, gapopen); | ^~~~ src/gtk_ltr_assistant.c:864:24: note: directive argument in the range [-2147483647, 2147483647] 864 | sprintf(last_call, "%s -a %d", last_call, gapopen); | ^~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/pango-1.0/pango/pango-utils.h:25, from /usr/include/pango-1.0/pango/pango.h:47, from /usr/include/gtk-2.0/gdk/gdktypes.h:37, from /usr/include/gtk-2.0/gdk/gdkscreen.h:32, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 6 and 8207 bytes into a destination of size 8192 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gtk_ltr_assistant.c:866:27: warning: ‘ -b ’ directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 866 | sprintf(last_call, "%s -b %d", last_call, gapextend); | ^~~~ src/gtk_ltr_assistant.c:866:24: note: directive argument in the range [-2147483647, 2147483647] 866 | sprintf(last_call, "%s -b %d", last_call, gapextend); | ^~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/pango-1.0/pango/pango-utils.h:25, from /usr/include/pango-1.0/pango/pango.h:47, from /usr/include/gtk-2.0/gdk/gdktypes.h:37, from /usr/include/gtk-2.0/gdk/gdkscreen.h:32, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 6 and 8207 bytes into a destination of size 8192 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gtk_ltr_assistant.c:868:27: warning: ‘ -r ’ directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 868 | sprintf(last_call, "%s -r %d", last_call, matchscore); | ^~~~ src/gtk_ltr_assistant.c:868:24: note: directive argument in the range [-2147483647, 2147483647] 868 | sprintf(last_call, "%s -r %d", last_call, matchscore); | ^~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/pango-1.0/pango/pango-utils.h:25, from /usr/include/pango-1.0/pango/pango.h:47, from /usr/include/gtk-2.0/gdk/gdktypes.h:37, from /usr/include/gtk-2.0/gdk/gdkscreen.h:32, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 6 and 8207 bytes into a destination of size 8192 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gtk_ltr_assistant.c:870:27: warning: ‘ -q ’ directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 870 | sprintf(last_call, "%s -q %d", last_call, mismatchcost); | ^~~~ src/gtk_ltr_assistant.c:870:24: note: directive argument in the range [-2147483647, 2147483647] 870 | sprintf(last_call, "%s -q %d", last_call, mismatchcost); | ^~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/pango-1.0/pango/pango-utils.h:25, from /usr/include/pango-1.0/pango/pango.h:47, from /usr/include/gtk-2.0/gdk/gdktypes.h:37, from /usr/include/gtk-2.0/gdk/gdkscreen.h:32, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 6 and 8207 bytes into a destination of size 8192 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gtk_ltr_assistant.c:872:27: warning: ‘ -k ’ directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 872 | sprintf(last_call, "%s -k %d", last_call, stepsize); | ^~~~ src/gtk_ltr_assistant.c:872:24: note: directive argument in the range [-2147483647, 2147483647] 872 | sprintf(last_call, "%s -k %d", last_call, stepsize); | ^~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/pango-1.0/pango/pango-utils.h:25, from /usr/include/pango-1.0/pango/pango.h:47, from /usr/include/gtk-2.0/gdk/gdktypes.h:37, from /usr/include/gtk-2.0/gdk/gdkscreen.h:32, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 6 and 8207 bytes into a destination of size 8192 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gtk_ltr_assistant.c:889:30: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 889 | sprintf(last_call, "%s %s", last_call, morelast); | ^ In file included from /usr/include/stdio.h:867, from /usr/include/pango-1.0/pango/pango-utils.h:25, from /usr/include/pango-1.0/pango/pango.h:47, from /usr/include/gtk-2.0/gdk/gdktypes.h:37, from /usr/include/gtk-2.0/gdk/gdkscreen.h:32, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/gtk_ltr_assistant.h:24, from src/gtk_ltr_assistant.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output 2 or more bytes (assuming 8193) into a destination of size 8192 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, from src/menubar.c:20: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/menubar.c:20: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ [compile obj/src/preprocess_visitor.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/preprocess_visitor.c -o obj/src/preprocess_visitor.o src/menubar.c: In function ‘first_save_and_reload’: src/menubar.c:875:3: warning: ‘g_thread_create’ is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] 875 | if (!g_thread_create(save_and_reload_data_start, (gpointer) threaddata, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/menubar.c:20: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ src/menubar.c: In function ‘save_as_activate’: src/menubar.c:962:3: warning: ‘g_thread_create’ is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] 962 | if (!g_thread_create(save_as_start, (gpointer) threaddata, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/menubar.c:20: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ src/menubar.c: In function ‘menubar_save_activate’: src/menubar.c:996:3: warning: ‘g_thread_create’ is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] 996 | if (!g_thread_create(save_project_data_start, (gpointer) threaddata, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/menubar.c:20: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ src/menubar.c: In function ‘open_activate’: src/menubar.c:1100:3: warning: ‘g_thread_create’ is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] 1100 | if (!g_thread_create(open_project_data_start, (gpointer) threaddata, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/menubar.c:20: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ src/menubar.c: In function ‘open_recent_activated’: src/menubar.c:1283:3: warning: ‘g_thread_create’ is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] 1283 | if (!g_thread_create(open_project_data_start, (gpointer) threaddata, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/menubar.c:20: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ [compile obj/src/project_wizard.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/project_wizard.c -o obj/src/project_wizard.o [compile obj/src/script_filter_stream.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/script_filter_stream.c -o obj/src/script_filter_stream.o [compile obj/src/statusbar.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/statusbar.c -o obj/src/statusbar.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, from src/project_wizard.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/project_wizard.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, from src/project_wizard.c:19: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/project_wizard.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ src/project_wizard.c: In function ‘project_wizard_apply’: src/project_wizard.c:292:3: warning: ‘g_thread_create’ is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] 292 | if (!g_thread_create(project_wizard_start_job, (gpointer) threaddata, FALSE, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/project_wizard.c:19: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ [compile obj/src/support.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/support.c -o obj/src/support.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/statusbar.h:22, from src/statusbar.c:20: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/statusbar.h:22, from src/statusbar.c:20: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ [compile obj/src/ltrsift.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/ltrsift.c -o obj/src/ltrsift.o In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/statusbar.h:22, from src/statusbar.c:20: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/statusbar.h:22, from src/statusbar.c:20: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ [compile obj/src/ltrsift_encode.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/ltrsift_encode.c -o obj/src/ltrsift_encode.o In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, from src/support.c:20: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/support.c:20: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ [linking bin/ltrsift_encode] cc obj/src/ltrsift_encode.o -o bin/ltrsift_encode -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wl,-z,relro -Wl,-z,now -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, from src/support.c:20: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/support.c:20: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, from src/ltrsift.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/ltrsift.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, from src/ltrsift.c:19: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/ltrsift.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ src/ltrsift.c: In function ‘main’: src/ltrsift.c:309:13: warning: Deprecated pre-processor symbol 309 | if (!g_thread_supported()) | ^~~~~~~~~~~~~~~~ src/ltrsift.c:310:5: warning: ‘g_thread_init’ is deprecated [-Wdeprecated-declarations] 310 | g_thread_init(NULL); | ^~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, from src/ltrsift.c:19: /usr/include/glib-2.0/glib/deprecated/gthread.h:261:10: note: declared here 261 | void g_thread_init (gpointer vtable); | ^~~~~~~~~~~~~ [linking bin/ltrsift] cc obj/src/default_style.o obj/src/error.o obj/src/gtk_blastn_params.o obj/src/gtk_blastn_params_refseq.o obj/src/gtk_label_close.o obj/src/gtk_ltr_assistant.o obj/src/gtk_ltr_families.o obj/src/gtk_ltr_filter.o obj/src/gtk_project_settings.o obj/src/menubar.o obj/src/preprocess_stream.o obj/src/preprocess_visitor.o obj/src/project_wizard.o obj/src/script_filter_stream.o obj/src/statusbar.o obj/src/support.o obj/src/ltrsift.o -o bin/ltrsift -g -O2 -fdebug-prefix-map=/build/ltrsift-OESf5y/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wl,-z,relro -Wl,-z,now `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' make[1]: Leaving directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' debian/rules override_dh_auto_test make[1]: Entering directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' #dh_auto_test -- useshared=yes x32=no 64bit=yes testthreads=5 make[1]: Leaving directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install make[1]: Entering directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' gunzip sample_data/dmel-2L-chromosome-r5.8.fasta.gz gzip -n -9 sample_data/dmel-2L-chromosome-r5.8.fasta dh_auto_install -- 64bit=yes errorcheck=no prefix=/build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr make -j4 install DESTDIR=/build/ltrsift-OESf5y/ltrsift-1.0.2/debian/ltrsift AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" 64bit=yes errorcheck=no prefix=/build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr make[2]: Entering directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' test -d /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/bin || mkdir -p /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/bin cp bin/* /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/bin test -d /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/filters || mkdir -p /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/filters cp -r filters/* /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/filters test -d /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/sample_data || mkdir -p /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/sample_data cp -r sample_data/* /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/sample_data test -d /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/style || mkdir -p /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/style cp -r style/* /build/ltrsift-OESf5y/ltrsift-1.0.2/debian/tmp/usr/style make[2]: Leaving directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' make[1]: Leaving directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' dh_install -a debian/rules override_dh_installdocs make[1]: Entering directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' dh_installdocs --exclude=license.template make[1]: Leaving directory '/build/ltrsift-OESf5y/ltrsift-1.0.2' dh_installchangelogs -a dh_installman -a dh_icons -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_missing: warning: usr/sample_data/clean_encseqs exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/sample_data/dmel-2L-chromosome-r5.8.fasta.gz exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/sample_data/dmel58.ltrd.gff3 exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/sample_data/ltrsift_encode exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/sample_data/README exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/sample_data/prepare_encseqs exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/style/default.style exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: ltrsift (6) * dh_installdocs: ltrsift (2) * dh_installman: ltrsift (2) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed dh_dwz -a dwz: debian/ltrsift/usr/bin/ltrsift: DWARF compression not beneficial - old size 415345 new size 418809 dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'ltrsift-dbgsym' in '../ltrsift-dbgsym_1.0.2-9_amd64.deb'. dpkg-deb: building package 'ltrsift' in '../ltrsift_1.0.2-9_amd64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../ltrsift_1.0.2-9_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/ltrsift-OESf5y /tmp/ltrsift-1.0.2-9levax9vw I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.LuTJ9cBvZZ... I: success in 474.3912 seconds md5: ltrsift-dbgsym_1.0.2-9_amd64.deb: OK md5: ltrsift_1.0.2-9_amd64.deb: OK sha1: ltrsift-dbgsym_1.0.2-9_amd64.deb: OK sha1: ltrsift_1.0.2-9_amd64.deb: OK sha256: ltrsift-dbgsym_1.0.2-9_amd64.deb: OK sha256: ltrsift_1.0.2-9_amd64.deb: OK Checksums: OK