Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/i/ivar/ivar_1.3.1+dfsg-5_all.buildinfo Use metasnap for getting required timestamps Cannot get timestamps from metasnap: 404 (Not Found) Use snapshot for getting required timestamps Get source package info: ivar=1.3.1+dfsg-5 Source URL: http://snapshot.notset.fr/mr/package/ivar/1.3.1+dfsg-5/srcfiles?fileinfo=1 Initialize APT cache Get binary package info: autoconf=2.71-2 Binary URL: http://snapshot.notset.fr/mr/binary/autoconf/2.71-2/binfiles?fileinfo=1 Get binary package info: automake=1:1.16.5-1.3 Binary URL: http://snapshot.notset.fr/mr/binary/automake/1:1.16.5-1.3/binfiles?fileinfo=1 Get binary package info: autopoint=0.21-6 Binary URL: http://snapshot.notset.fr/mr/binary/autopoint/0.21-6/binfiles?fileinfo=1 Get binary package info: autotools-dev=20220109.1 Binary URL: http://snapshot.notset.fr/mr/binary/autotools-dev/20220109.1/binfiles?fileinfo=1 Get binary package info: base-files=12.2 Binary URL: http://snapshot.notset.fr/mr/binary/base-files/12.2/binfiles?fileinfo=1 Get binary package info: base-passwd=3.5.52 Binary URL: http://snapshot.notset.fr/mr/binary/base-passwd/3.5.52/binfiles?fileinfo=1 Get binary package info: bash=5.1-6.1 Binary URL: http://snapshot.notset.fr/mr/binary/bash/5.1-6.1/binfiles?fileinfo=1 Get binary package info: binutils=2.38.50.20220707-1 Binary URL: http://snapshot.notset.fr/mr/binary/binutils/2.38.50.20220707-1/binfiles?fileinfo=1 Get binary package info: binutils-common=2.38.50.20220707-1 Binary URL: http://snapshot.notset.fr/mr/binary/binutils-common/2.38.50.20220707-1/binfiles?fileinfo=1 Get binary package info: binutils-x86-64-linux-gnu=2.38.50.20220707-1 Binary URL: http://snapshot.notset.fr/mr/binary/binutils-x86-64-linux-gnu/2.38.50.20220707-1/binfiles?fileinfo=1 Get binary package info: bsdextrautils=2.38-4 Binary URL: http://snapshot.notset.fr/mr/binary/bsdextrautils/2.38-4/binfiles?fileinfo=1 Get binary package info: bsdutils=1:2.38-4 Binary URL: http://snapshot.notset.fr/mr/binary/bsdutils/1:2.38-4/binfiles?fileinfo=1 Get binary package info: build-essential=12.9 Binary URL: http://snapshot.notset.fr/mr/binary/build-essential/12.9/binfiles?fileinfo=1 Get binary package info: bzip2=1.0.8-5 Binary URL: http://snapshot.notset.fr/mr/binary/bzip2/1.0.8-5/binfiles?fileinfo=1 Get binary package info: coreutils=8.32-4.1 Binary URL: http://snapshot.notset.fr/mr/binary/coreutils/8.32-4.1/binfiles?fileinfo=1 Get binary package info: cpp=4:11.2.0-2 Binary URL: http://snapshot.notset.fr/mr/binary/cpp/4:11.2.0-2/binfiles?fileinfo=1 Get binary package info: cpp-11=11.3.0-4 Binary URL: http://snapshot.notset.fr/mr/binary/cpp-11/11.3.0-4/binfiles?fileinfo=1 Get binary package info: dash=0.5.11+git20210903+057cd650a4ed-8 Binary URL: http://snapshot.notset.fr/mr/binary/dash/0.5.11+git20210903+057cd650a4ed-8/binfiles?fileinfo=1 Get binary package info: debconf=1.5.79 Binary URL: http://snapshot.notset.fr/mr/binary/debconf/1.5.79/binfiles?fileinfo=1 Get binary package info: debhelper=13.8 Binary URL: http://snapshot.notset.fr/mr/binary/debhelper/13.8/binfiles?fileinfo=1 Get binary package info: debianutils=5.7-0.2 Binary URL: http://snapshot.notset.fr/mr/binary/debianutils/5.7-0.2/binfiles?fileinfo=1 Get binary package info: dh-autoreconf=20 Binary URL: http://snapshot.notset.fr/mr/binary/dh-autoreconf/20/binfiles?fileinfo=1 Get binary package info: dh-strip-nondeterminism=1.13.0-1 Binary URL: http://snapshot.notset.fr/mr/binary/dh-strip-nondeterminism/1.13.0-1/binfiles?fileinfo=1 Get binary package info: diffutils=1:3.7-5 Binary URL: http://snapshot.notset.fr/mr/binary/diffutils/1:3.7-5/binfiles?fileinfo=1 Get binary package info: dpkg=1.21.9 Binary URL: http://snapshot.notset.fr/mr/binary/dpkg/1.21.9/binfiles?fileinfo=1 Get binary package info: dpkg-dev=1.21.9 Binary URL: http://snapshot.notset.fr/mr/binary/dpkg-dev/1.21.9/binfiles?fileinfo=1 Get binary package info: dwz=0.14-1 Binary URL: http://snapshot.notset.fr/mr/binary/dwz/0.14-1/binfiles?fileinfo=1 Get binary package info: file=1:5.41-4 Binary URL: http://snapshot.notset.fr/mr/binary/file/1:5.41-4/binfiles?fileinfo=1 Get binary package info: findutils=4.9.0-3 Binary URL: http://snapshot.notset.fr/mr/binary/findutils/4.9.0-3/binfiles?fileinfo=1 Get binary package info: g++=4:11.2.0-2 Binary URL: http://snapshot.notset.fr/mr/binary/g++/4:11.2.0-2/binfiles?fileinfo=1 Get binary package info: g++-11=11.3.0-4 Binary URL: http://snapshot.notset.fr/mr/binary/g++-11/11.3.0-4/binfiles?fileinfo=1 Get binary package info: gcc=4:11.2.0-2 Binary URL: http://snapshot.notset.fr/mr/binary/gcc/4:11.2.0-2/binfiles?fileinfo=1 Get binary package info: gcc-11=11.3.0-4 Binary URL: http://snapshot.notset.fr/mr/binary/gcc-11/11.3.0-4/binfiles?fileinfo=1 Get binary package info: gcc-11-base=11.3.0-4 Binary URL: http://snapshot.notset.fr/mr/binary/gcc-11-base/11.3.0-4/binfiles?fileinfo=1 Get binary package info: gcc-12-base=12.1.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/gcc-12-base/12.1.0-5/binfiles?fileinfo=1 Get binary package info: gettext=0.21-6 Binary URL: http://snapshot.notset.fr/mr/binary/gettext/0.21-6/binfiles?fileinfo=1 Get binary package info: gettext-base=0.21-6 Binary URL: http://snapshot.notset.fr/mr/binary/gettext-base/0.21-6/binfiles?fileinfo=1 Get binary package info: grep=3.7-1 Binary URL: http://snapshot.notset.fr/mr/binary/grep/3.7-1/binfiles?fileinfo=1 Get binary package info: groff-base=1.22.4-8 Binary URL: http://snapshot.notset.fr/mr/binary/groff-base/1.22.4-8/binfiles?fileinfo=1 Get binary package info: gzip=1.12-1 Binary URL: http://snapshot.notset.fr/mr/binary/gzip/1.12-1/binfiles?fileinfo=1 Get binary package info: hostname=3.23 Binary URL: http://snapshot.notset.fr/mr/binary/hostname/3.23/binfiles?fileinfo=1 Get binary package info: init-system-helpers=1.64 Binary URL: http://snapshot.notset.fr/mr/binary/init-system-helpers/1.64/binfiles?fileinfo=1 Get binary package info: intltool-debian=0.35.0+20060710.5 Binary URL: http://snapshot.notset.fr/mr/binary/intltool-debian/0.35.0+20060710.5/binfiles?fileinfo=1 Get binary package info: libacl1=2.3.1-1 Binary URL: http://snapshot.notset.fr/mr/binary/libacl1/2.3.1-1/binfiles?fileinfo=1 Get binary package info: libarchive-zip-perl=1.68-1 Binary URL: http://snapshot.notset.fr/mr/binary/libarchive-zip-perl/1.68-1/binfiles?fileinfo=1 Get binary package info: libasan6=11.3.0-4 Binary URL: http://snapshot.notset.fr/mr/binary/libasan6/11.3.0-4/binfiles?fileinfo=1 Get binary package info: libatomic1=12.1.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/libatomic1/12.1.0-5/binfiles?fileinfo=1 Get binary package info: libattr1=1:2.5.1-1 Binary URL: http://snapshot.notset.fr/mr/binary/libattr1/1:2.5.1-1/binfiles?fileinfo=1 Get binary package info: libaudit-common=1:3.0.7-1 Binary URL: http://snapshot.notset.fr/mr/binary/libaudit-common/1:3.0.7-1/binfiles?fileinfo=1 Get binary package info: libaudit1=1:3.0.7-1+b1 Binary URL: http://snapshot.notset.fr/mr/binary/libaudit1/1:3.0.7-1+b1/binfiles?fileinfo=1 Get binary package info: libbinutils=2.38.50.20220707-1 Binary URL: http://snapshot.notset.fr/mr/binary/libbinutils/2.38.50.20220707-1/binfiles?fileinfo=1 Get binary package info: libblkid1=2.38-4 Binary URL: http://snapshot.notset.fr/mr/binary/libblkid1/2.38-4/binfiles?fileinfo=1 Get binary package info: libbrotli1=1.0.9-2+b3 Binary URL: http://snapshot.notset.fr/mr/binary/libbrotli1/1.0.9-2+b3/binfiles?fileinfo=1 Get binary package info: libbz2-1.0=1.0.8-5 Binary URL: http://snapshot.notset.fr/mr/binary/libbz2-1.0/1.0.8-5/binfiles?fileinfo=1 Get binary package info: libc-bin=2.33-7 Binary URL: http://snapshot.notset.fr/mr/binary/libc-bin/2.33-7/binfiles?fileinfo=1 Get binary package info: libc-dev-bin=2.33-7 Binary URL: http://snapshot.notset.fr/mr/binary/libc-dev-bin/2.33-7/binfiles?fileinfo=1 Get binary package info: libc6=2.33-7 Binary URL: http://snapshot.notset.fr/mr/binary/libc6/2.33-7/binfiles?fileinfo=1 Get binary package info: libc6-dev=2.33-7 Binary URL: http://snapshot.notset.fr/mr/binary/libc6-dev/2.33-7/binfiles?fileinfo=1 Get binary package info: libcap-ng0=0.8.3-1 Binary URL: http://snapshot.notset.fr/mr/binary/libcap-ng0/0.8.3-1/binfiles?fileinfo=1 Get binary package info: libcap2=1:2.44-1 Binary URL: http://snapshot.notset.fr/mr/binary/libcap2/1:2.44-1/binfiles?fileinfo=1 Get binary package info: libcc1-0=12.1.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/libcc1-0/12.1.0-5/binfiles?fileinfo=1 Get binary package info: libcom-err2=1.46.5-2 Binary URL: http://snapshot.notset.fr/mr/binary/libcom-err2/1.46.5-2/binfiles?fileinfo=1 Get binary package info: libcrypt-dev=1:4.4.28-1 Binary URL: http://snapshot.notset.fr/mr/binary/libcrypt-dev/1:4.4.28-1/binfiles?fileinfo=1 Get binary package info: libcrypt1=1:4.4.28-1 Binary URL: http://snapshot.notset.fr/mr/binary/libcrypt1/1:4.4.28-1/binfiles?fileinfo=1 Get binary package info: libctf-nobfd0=2.38.50.20220707-1 Binary URL: http://snapshot.notset.fr/mr/binary/libctf-nobfd0/2.38.50.20220707-1/binfiles?fileinfo=1 Get binary package info: libctf0=2.38.50.20220707-1 Binary URL: http://snapshot.notset.fr/mr/binary/libctf0/2.38.50.20220707-1/binfiles?fileinfo=1 Get binary package info: libcurl3-gnutls=7.84.0-2 Binary URL: http://snapshot.notset.fr/mr/binary/libcurl3-gnutls/7.84.0-2/binfiles?fileinfo=1 Get binary package info: libcurl4-gnutls-dev=7.84.0-2 Binary URL: http://snapshot.notset.fr/mr/binary/libcurl4-gnutls-dev/7.84.0-2/binfiles?fileinfo=1 Get binary package info: libdb5.3=5.3.28+dfsg1-0.10 Binary URL: http://snapshot.notset.fr/mr/binary/libdb5.3/5.3.28+dfsg1-0.10/binfiles?fileinfo=1 Get binary package info: libdebconfclient0=0.263 Binary URL: http://snapshot.notset.fr/mr/binary/libdebconfclient0/0.263/binfiles?fileinfo=1 Get binary package info: libdebhelper-perl=13.8 Binary URL: http://snapshot.notset.fr/mr/binary/libdebhelper-perl/13.8/binfiles?fileinfo=1 Get binary package info: libdeflate-dev=1.12-1 Binary URL: http://snapshot.notset.fr/mr/binary/libdeflate-dev/1.12-1/binfiles?fileinfo=1 Get binary package info: libdeflate0=1.12-1 Binary URL: http://snapshot.notset.fr/mr/binary/libdeflate0/1.12-1/binfiles?fileinfo=1 Get binary package info: libdpkg-perl=1.21.9 Binary URL: http://snapshot.notset.fr/mr/binary/libdpkg-perl/1.21.9/binfiles?fileinfo=1 Get binary package info: libelf1=0.187-1 Binary URL: http://snapshot.notset.fr/mr/binary/libelf1/0.187-1/binfiles?fileinfo=1 Get binary package info: libffi8=3.4.2-4 Binary URL: http://snapshot.notset.fr/mr/binary/libffi8/3.4.2-4/binfiles?fileinfo=1 Get binary package info: libfile-stripnondeterminism-perl=1.13.0-1 Binary URL: http://snapshot.notset.fr/mr/binary/libfile-stripnondeterminism-perl/1.13.0-1/binfiles?fileinfo=1 Get binary package info: libgcc-11-dev=11.3.0-4 Binary URL: http://snapshot.notset.fr/mr/binary/libgcc-11-dev/11.3.0-4/binfiles?fileinfo=1 Get binary package info: libgcc-s1=12.1.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/libgcc-s1/12.1.0-5/binfiles?fileinfo=1 Get binary package info: libgcrypt20=1.10.1-2 Binary URL: http://snapshot.notset.fr/mr/binary/libgcrypt20/1.10.1-2/binfiles?fileinfo=1 Get binary package info: libgdbm-compat4=1.23-1 Binary URL: http://snapshot.notset.fr/mr/binary/libgdbm-compat4/1.23-1/binfiles?fileinfo=1 Get binary package info: libgdbm6=1.23-1 Binary URL: http://snapshot.notset.fr/mr/binary/libgdbm6/1.23-1/binfiles?fileinfo=1 Get binary package info: libgmp10=2:6.2.1+dfsg1-1 Binary URL: http://snapshot.notset.fr/mr/binary/libgmp10/2:6.2.1+dfsg1-1/binfiles?fileinfo=1 Get binary package info: libgnutls30=3.7.6-2 Binary URL: http://snapshot.notset.fr/mr/binary/libgnutls30/3.7.6-2/binfiles?fileinfo=1 Get binary package info: libgomp1=12.1.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/libgomp1/12.1.0-5/binfiles?fileinfo=1 Get binary package info: libgpg-error0=1.45-2 Binary URL: http://snapshot.notset.fr/mr/binary/libgpg-error0/1.45-2/binfiles?fileinfo=1 Get binary package info: libgprofng0=2.38.50.20220707-1 Binary URL: http://snapshot.notset.fr/mr/binary/libgprofng0/2.38.50.20220707-1/binfiles?fileinfo=1 Get binary package info: libgssapi-krb5-2=1.19.2-2+b2 Binary URL: http://snapshot.notset.fr/mr/binary/libgssapi-krb5-2/1.19.2-2+b2/binfiles?fileinfo=1 Get binary package info: libhogweed6=3.7.3-1 Binary URL: http://snapshot.notset.fr/mr/binary/libhogweed6/3.7.3-1/binfiles?fileinfo=1 Get binary package info: libhts-dev=1.13+ds-2+b1 Binary URL: http://snapshot.notset.fr/mr/binary/libhts-dev/1.13+ds-2+b1/binfiles?fileinfo=1 Get binary package info: libhts3=1.13+ds-2+b1 Binary URL: http://snapshot.notset.fr/mr/binary/libhts3/1.13+ds-2+b1/binfiles?fileinfo=1 Get binary package info: libhtscodecs2=1.2.2-1 Binary URL: http://snapshot.notset.fr/mr/binary/libhtscodecs2/1.2.2-1/binfiles?fileinfo=1 Get binary package info: libicu71=71.1-3 Binary URL: http://snapshot.notset.fr/mr/binary/libicu71/71.1-3/binfiles?fileinfo=1 Get binary package info: libidn2-0=2.3.2-2 Binary URL: http://snapshot.notset.fr/mr/binary/libidn2-0/2.3.2-2/binfiles?fileinfo=1 Get binary package info: libisl23=0.24-2 Binary URL: http://snapshot.notset.fr/mr/binary/libisl23/0.24-2/binfiles?fileinfo=1 Get binary package info: libitm1=12.1.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/libitm1/12.1.0-5/binfiles?fileinfo=1 Get binary package info: libk5crypto3=1.19.2-2+b2 Binary URL: http://snapshot.notset.fr/mr/binary/libk5crypto3/1.19.2-2+b2/binfiles?fileinfo=1 Get binary package info: libkeyutils1=1.6.3-1 Binary URL: http://snapshot.notset.fr/mr/binary/libkeyutils1/1.6.3-1/binfiles?fileinfo=1 Get binary package info: libkrb5-3=1.19.2-2+b2 Binary URL: http://snapshot.notset.fr/mr/binary/libkrb5-3/1.19.2-2+b2/binfiles?fileinfo=1 Get binary package info: libkrb5support0=1.19.2-2+b2 Binary URL: http://snapshot.notset.fr/mr/binary/libkrb5support0/1.19.2-2+b2/binfiles?fileinfo=1 Get binary package info: libldap-2.5-0=2.5.12+dfsg-2 Binary URL: http://snapshot.notset.fr/mr/binary/libldap-2.5-0/2.5.12+dfsg-2/binfiles?fileinfo=1 Get binary package info: liblsan0=12.1.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/liblsan0/12.1.0-5/binfiles?fileinfo=1 Get binary package info: liblz4-1=1.9.3-2 Binary URL: http://snapshot.notset.fr/mr/binary/liblz4-1/1.9.3-2/binfiles?fileinfo=1 Get binary package info: liblzma-dev=5.2.5-2.1 Binary URL: http://snapshot.notset.fr/mr/binary/liblzma-dev/5.2.5-2.1/binfiles?fileinfo=1 Get binary package info: liblzma5=5.2.5-2.1 Binary URL: http://snapshot.notset.fr/mr/binary/liblzma5/5.2.5-2.1/binfiles?fileinfo=1 Get binary package info: libmagic-mgc=1:5.41-4 Binary URL: http://snapshot.notset.fr/mr/binary/libmagic-mgc/1:5.41-4/binfiles?fileinfo=1 Get binary package info: libmagic1=1:5.41-4 Binary URL: http://snapshot.notset.fr/mr/binary/libmagic1/1:5.41-4/binfiles?fileinfo=1 Get binary package info: libmount1=2.38-4 Binary URL: http://snapshot.notset.fr/mr/binary/libmount1/2.38-4/binfiles?fileinfo=1 Get binary package info: libmpc3=1.2.1-2 Binary URL: http://snapshot.notset.fr/mr/binary/libmpc3/1.2.1-2/binfiles?fileinfo=1 Get binary package info: libmpfr6=4.1.0-3 Binary URL: http://snapshot.notset.fr/mr/binary/libmpfr6/4.1.0-3/binfiles?fileinfo=1 Get binary package info: libnettle8=3.7.3-1 Binary URL: http://snapshot.notset.fr/mr/binary/libnettle8/3.7.3-1/binfiles?fileinfo=1 Get binary package info: libnghttp2-14=1.47.0-1+b1 Binary URL: http://snapshot.notset.fr/mr/binary/libnghttp2-14/1.47.0-1+b1/binfiles?fileinfo=1 Get binary package info: libnsl-dev=1.3.0-2 Binary URL: http://snapshot.notset.fr/mr/binary/libnsl-dev/1.3.0-2/binfiles?fileinfo=1 Get binary package info: libnsl2=1.3.0-2 Binary URL: http://snapshot.notset.fr/mr/binary/libnsl2/1.3.0-2/binfiles?fileinfo=1 Get binary package info: libp11-kit0=0.24.1-1 Binary URL: http://snapshot.notset.fr/mr/binary/libp11-kit0/0.24.1-1/binfiles?fileinfo=1 Get binary package info: libpam-modules=1.4.0-13 Binary URL: http://snapshot.notset.fr/mr/binary/libpam-modules/1.4.0-13/binfiles?fileinfo=1 Get binary package info: libpam-modules-bin=1.4.0-13 Binary URL: http://snapshot.notset.fr/mr/binary/libpam-modules-bin/1.4.0-13/binfiles?fileinfo=1 Get binary package info: libpam-runtime=1.4.0-13 Binary URL: http://snapshot.notset.fr/mr/binary/libpam-runtime/1.4.0-13/binfiles?fileinfo=1 Get binary package info: libpam0g=1.4.0-13 Binary URL: http://snapshot.notset.fr/mr/binary/libpam0g/1.4.0-13/binfiles?fileinfo=1 Get binary package info: libpcre2-8-0=10.40-1 Binary URL: http://snapshot.notset.fr/mr/binary/libpcre2-8-0/10.40-1/binfiles?fileinfo=1 Get binary package info: libpcre3=2:8.39-14 Binary URL: http://snapshot.notset.fr/mr/binary/libpcre3/2:8.39-14/binfiles?fileinfo=1 Get binary package info: libperl5.34=5.34.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/libperl5.34/5.34.0-5/binfiles?fileinfo=1 Get binary package info: libpipeline1=1.5.6-1 Binary URL: http://snapshot.notset.fr/mr/binary/libpipeline1/1.5.6-1/binfiles?fileinfo=1 Get binary package info: libpsl5=0.21.0-1.2 Binary URL: http://snapshot.notset.fr/mr/binary/libpsl5/0.21.0-1.2/binfiles?fileinfo=1 Get binary package info: libquadmath0=12.1.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/libquadmath0/12.1.0-5/binfiles?fileinfo=1 Get binary package info: librtmp1=2.4+20151223.gitfa8646d.1-2+b2 Binary URL: http://snapshot.notset.fr/mr/binary/librtmp1/2.4+20151223.gitfa8646d.1-2+b2/binfiles?fileinfo=1 Get binary package info: libsasl2-2=2.1.28+dfsg-6 Binary URL: http://snapshot.notset.fr/mr/binary/libsasl2-2/2.1.28+dfsg-6/binfiles?fileinfo=1 Get binary package info: libsasl2-modules-db=2.1.28+dfsg-6 Binary URL: http://snapshot.notset.fr/mr/binary/libsasl2-modules-db/2.1.28+dfsg-6/binfiles?fileinfo=1 Get binary package info: libseccomp2=2.5.4-1 Binary URL: http://snapshot.notset.fr/mr/binary/libseccomp2/2.5.4-1/binfiles?fileinfo=1 Get binary package info: libselinux1=3.4-1 Binary URL: http://snapshot.notset.fr/mr/binary/libselinux1/3.4-1/binfiles?fileinfo=1 Get binary package info: libsigsegv2=2.14-1 Binary URL: http://snapshot.notset.fr/mr/binary/libsigsegv2/2.14-1/binfiles?fileinfo=1 Get binary package info: libsmartcols1=2.38-4 Binary URL: http://snapshot.notset.fr/mr/binary/libsmartcols1/2.38-4/binfiles?fileinfo=1 Get binary package info: libssh2-1=1.10.0-3+b1 Binary URL: http://snapshot.notset.fr/mr/binary/libssh2-1/1.10.0-3+b1/binfiles?fileinfo=1 Get binary package info: libssl3=3.0.4-2 Binary URL: http://snapshot.notset.fr/mr/binary/libssl3/3.0.4-2/binfiles?fileinfo=1 Get binary package info: libstdc++-11-dev=11.3.0-4 Binary URL: http://snapshot.notset.fr/mr/binary/libstdc++-11-dev/11.3.0-4/binfiles?fileinfo=1 Get binary package info: libstdc++6=12.1.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/libstdc++6/12.1.0-5/binfiles?fileinfo=1 Get binary package info: libsub-override-perl=0.09-3 Binary URL: http://snapshot.notset.fr/mr/binary/libsub-override-perl/0.09-3/binfiles?fileinfo=1 Get binary package info: libsystemd0=251.2-8 Binary URL: http://snapshot.notset.fr/mr/binary/libsystemd0/251.2-8/binfiles?fileinfo=1 Get binary package info: libtasn1-6=4.18.0-4 Binary URL: http://snapshot.notset.fr/mr/binary/libtasn1-6/4.18.0-4/binfiles?fileinfo=1 Get binary package info: libtinfo6=6.3+20220423-2 Binary URL: http://snapshot.notset.fr/mr/binary/libtinfo6/6.3+20220423-2/binfiles?fileinfo=1 Get binary package info: libtirpc-common=1.3.2-2 Binary URL: http://snapshot.notset.fr/mr/binary/libtirpc-common/1.3.2-2/binfiles?fileinfo=1 Get binary package info: libtirpc-dev=1.3.2-2 Binary URL: http://snapshot.notset.fr/mr/binary/libtirpc-dev/1.3.2-2/binfiles?fileinfo=1 Get binary package info: libtirpc3=1.3.2-2 Binary URL: http://snapshot.notset.fr/mr/binary/libtirpc3/1.3.2-2/binfiles?fileinfo=1 Get binary package info: libtool=2.4.7-4 Binary URL: http://snapshot.notset.fr/mr/binary/libtool/2.4.7-4/binfiles?fileinfo=1 Get binary package info: libtsan0=11.3.0-4 Binary URL: http://snapshot.notset.fr/mr/binary/libtsan0/11.3.0-4/binfiles?fileinfo=1 Get binary package info: libubsan1=12.1.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/libubsan1/12.1.0-5/binfiles?fileinfo=1 Get binary package info: libuchardet0=0.0.7-1 Binary URL: http://snapshot.notset.fr/mr/binary/libuchardet0/0.0.7-1/binfiles?fileinfo=1 Get binary package info: libudev1=251.2-8 Binary URL: http://snapshot.notset.fr/mr/binary/libudev1/251.2-8/binfiles?fileinfo=1 Get binary package info: libunistring2=1.0-1 Binary URL: http://snapshot.notset.fr/mr/binary/libunistring2/1.0-1/binfiles?fileinfo=1 Get binary package info: libuuid1=2.38-4 Binary URL: http://snapshot.notset.fr/mr/binary/libuuid1/2.38-4/binfiles?fileinfo=1 Get binary package info: libxml2=2.9.14+dfsg-1 Binary URL: http://snapshot.notset.fr/mr/binary/libxml2/2.9.14+dfsg-1/binfiles?fileinfo=1 Get binary package info: libzstd1=1.5.2+dfsg-1 Binary URL: http://snapshot.notset.fr/mr/binary/libzstd1/1.5.2+dfsg-1/binfiles?fileinfo=1 Get binary package info: linux-libc-dev=5.18.5-1 Binary URL: http://snapshot.notset.fr/mr/binary/linux-libc-dev/5.18.5-1/binfiles?fileinfo=1 Get binary package info: login=1:4.11.1+dfsg1-2 Binary URL: http://snapshot.notset.fr/mr/binary/login/1:4.11.1+dfsg1-2/binfiles?fileinfo=1 Get binary package info: lsb-base=11.2 Binary URL: http://snapshot.notset.fr/mr/binary/lsb-base/11.2/binfiles?fileinfo=1 Get binary package info: m4=1.4.18-5 Binary URL: http://snapshot.notset.fr/mr/binary/m4/1.4.18-5/binfiles?fileinfo=1 Get binary package info: make=4.3-4.1 Binary URL: http://snapshot.notset.fr/mr/binary/make/4.3-4.1/binfiles?fileinfo=1 Get binary package info: man-db=2.10.2-1 Binary URL: http://snapshot.notset.fr/mr/binary/man-db/2.10.2-1/binfiles?fileinfo=1 Get binary package info: mawk=1.3.4.20200120-3.1 Binary URL: http://snapshot.notset.fr/mr/binary/mawk/1.3.4.20200120-3.1/binfiles?fileinfo=1 Get binary package info: ncurses-base=6.3+20220423-2 Binary URL: http://snapshot.notset.fr/mr/binary/ncurses-base/6.3+20220423-2/binfiles?fileinfo=1 Get binary package info: ncurses-bin=6.3+20220423-2 Binary URL: http://snapshot.notset.fr/mr/binary/ncurses-bin/6.3+20220423-2/binfiles?fileinfo=1 Get binary package info: patch=2.7.6-7 Binary URL: http://snapshot.notset.fr/mr/binary/patch/2.7.6-7/binfiles?fileinfo=1 Get binary package info: perl=5.34.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/perl/5.34.0-5/binfiles?fileinfo=1 Get binary package info: perl-base=5.34.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/perl-base/5.34.0-5/binfiles?fileinfo=1 Get binary package info: perl-modules-5.34=5.34.0-5 Binary URL: http://snapshot.notset.fr/mr/binary/perl-modules-5.34/5.34.0-5/binfiles?fileinfo=1 Get binary package info: po-debconf=1.0.21+nmu1 Binary URL: http://snapshot.notset.fr/mr/binary/po-debconf/1.0.21+nmu1/binfiles?fileinfo=1 Get binary package info: rpcsvc-proto=1.4.2-4 Binary URL: http://snapshot.notset.fr/mr/binary/rpcsvc-proto/1.4.2-4/binfiles?fileinfo=1 Get binary package info: sed=4.8-1 Binary URL: http://snapshot.notset.fr/mr/binary/sed/4.8-1/binfiles?fileinfo=1 Get binary package info: sensible-utils=0.0.17 Binary URL: http://snapshot.notset.fr/mr/binary/sensible-utils/0.0.17/binfiles?fileinfo=1 Get binary package info: sysvinit-utils=3.03-1 Binary URL: http://snapshot.notset.fr/mr/binary/sysvinit-utils/3.03-1/binfiles?fileinfo=1 Get binary package info: tar=1.34+dfsg-1 Binary URL: http://snapshot.notset.fr/mr/binary/tar/1.34+dfsg-1/binfiles?fileinfo=1 Get binary package info: util-linux=2.38-4 Binary URL: http://snapshot.notset.fr/mr/binary/util-linux/2.38-4/binfiles?fileinfo=1 Get binary package info: util-linux-extra=2.38-4 Binary URL: http://snapshot.notset.fr/mr/binary/util-linux-extra/2.38-4/binfiles?fileinfo=1 Get binary package info: xz-utils=5.2.5-2.1 Binary URL: http://snapshot.notset.fr/mr/binary/xz-utils/5.2.5-2.1/binfiles?fileinfo=1 Get binary package info: zlib1g=1:1.2.11.dfsg-4 Binary URL: http://snapshot.notset.fr/mr/binary/zlib1g/1:1.2.11.dfsg-4/binfiles?fileinfo=1 Get binary package info: zlib1g-dev=1:1.2.11.dfsg-4 Binary URL: http://snapshot.notset.fr/mr/binary/zlib1g-dev/1:1.2.11.dfsg-4/binfiles?fileinfo=1 Remaining packages to be found: 176 Timestamp source (21 packages): deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220713T145608Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220611T030612Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220419T024549Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220714T210818Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220712T215953Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220501T085721Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20211103T025035Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220426T025843Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220224T210146Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220707T212059Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220405T031327Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220703T032011Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220416T025423Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220511T030041Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20210823T024636Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20211205T025806Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220705T030342Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20211223T031038Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220706T025631Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20210901T090918Z/ bookworm main Remaining packages to be found: 5 Timestamp source (2 packages): deb http://snapshot.notset.fr/archive/debian/20220704T033014Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220717T030141Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220626T030429Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220509T030319Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220414T030009Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220208T091208Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220623T092901Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220620T031814Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220331T030648Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20210911T144836Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220321T040007Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220211T025424Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220125T033125Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20210930T025245Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220602T030029Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20211108T025858Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220317T031134Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220507T034236Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20210816T024705Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220430T025357Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20210909T025907Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220101T024315Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220412T025122Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20210903T030245Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220216T030243Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220318T025831Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20211118T205424Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220628T032327Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220106T025822Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220619T155342Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220122T031231Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220616T214802Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220625T030239Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220502T032918Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220702T033910Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220513T034642Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20210818T085356Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20211017T024714Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220529T034001Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220329T030734Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220425T032014Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220413T150025Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220427T031445Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220202T030237Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220707T030959Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220619T030107Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20211122T030439Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220212T031344Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220510T155316Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220310T035035Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220528T035722Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220323T030602Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20210824T024320Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20210902T030735Z/ bookworm main Skipping snapshot: deb http://snapshot.notset.fr/archive/debian/20220421T030943Z/ bookworm main Remaining packages to be found: 2 Timestamp source (2 packages): deb http://snapshot.notset.fr/archive/debian/20220707T030959Z/ unstable main New buildinfo file: /tmp/ivar-1.3.1+dfsg-5cmr7gx18/ivar_1.3.1+dfsg-5_all.buildinfo env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf:all=2.71-2 automake:all=1:1.16.5-1.3 autopoint:all=0.21-6 autotools-dev:all=20220109.1 base-files:amd64=12.2 base-passwd:amd64=3.5.52 bash:amd64=5.1-6.1 binutils:amd64=2.38.50.20220707-1 binutils-common:amd64=2.38.50.20220707-1 binutils-x86-64-linux-gnu:amd64=2.38.50.20220707-1 bsdextrautils:amd64=2.38-4 bsdutils:amd64=1:2.38-4 build-essential:amd64=12.9 bzip2:amd64=1.0.8-5 coreutils:amd64=8.32-4.1 cpp:amd64=4:11.2.0-2 cpp-11:amd64=11.3.0-4 dash:amd64=0.5.11+git20210903+057cd650a4ed-8 debconf:all=1.5.79 debhelper:all=13.8 debianutils:amd64=5.7-0.2 dh-autoreconf:all=20 dh-strip-nondeterminism:all=1.13.0-1 diffutils:amd64=1:3.7-5 dpkg:amd64=1.21.9 dpkg-dev:all=1.21.9 dwz:amd64=0.14-1 file:amd64=1:5.41-4 findutils:amd64=4.9.0-3 g++:amd64=4:11.2.0-2 g++-11:amd64=11.3.0-4 gcc:amd64=4:11.2.0-2 gcc-11:amd64=11.3.0-4 gcc-11-base:amd64=11.3.0-4 gcc-12-base:amd64=12.1.0-5 gettext:amd64=0.21-6 gettext-base:amd64=0.21-6 grep:amd64=3.7-1 groff-base:amd64=1.22.4-8 gzip:amd64=1.12-1 hostname:amd64=3.23 init-system-helpers:all=1.64 intltool-debian:all=0.35.0+20060710.5 libacl1:amd64=2.3.1-1 libarchive-zip-perl:all=1.68-1 libasan6:amd64=11.3.0-4 libatomic1:amd64=12.1.0-5 libattr1:amd64=1:2.5.1-1 libaudit-common:all=1:3.0.7-1 libaudit1:amd64=1:3.0.7-1+b1 libbinutils:amd64=2.38.50.20220707-1 libblkid1:amd64=2.38-4 libbrotli1:amd64=1.0.9-2+b3 libbz2-1.0:amd64=1.0.8-5 libc-bin:amd64=2.33-7 libc-dev-bin:amd64=2.33-7 libc6:amd64=2.33-7 libc6-dev:amd64=2.33-7 libcap-ng0:amd64=0.8.3-1 libcap2:amd64=1:2.44-1 libcc1-0:amd64=12.1.0-5 libcom-err2:amd64=1.46.5-2 libcrypt-dev:amd64=1:4.4.28-1 libcrypt1:amd64=1:4.4.28-1 libctf-nobfd0:amd64=2.38.50.20220707-1 libctf0:amd64=2.38.50.20220707-1 libcurl3-gnutls:amd64=7.84.0-2 libcurl4-gnutls-dev:amd64=7.84.0-2 libdb5.3:amd64=5.3.28+dfsg1-0.10 libdebconfclient0:amd64=0.263 libdebhelper-perl:all=13.8 libdeflate-dev:amd64=1.12-1 libdeflate0:amd64=1.12-1 libdpkg-perl:all=1.21.9 libelf1:amd64=0.187-1 libffi8:amd64=3.4.2-4 libfile-stripnondeterminism-perl:all=1.13.0-1 libgcc-11-dev:amd64=11.3.0-4 libgcc-s1:amd64=12.1.0-5 libgcrypt20:amd64=1.10.1-2 libgdbm-compat4:amd64=1.23-1 libgdbm6:amd64=1.23-1 libgmp10:amd64=2:6.2.1+dfsg1-1 libgnutls30:amd64=3.7.6-2 libgomp1:amd64=12.1.0-5 libgpg-error0:amd64=1.45-2 libgprofng0:amd64=2.38.50.20220707-1 libgssapi-krb5-2:amd64=1.19.2-2+b2 libhogweed6:amd64=3.7.3-1 libhts-dev:amd64=1.13+ds-2+b1 libhts3:amd64=1.13+ds-2+b1 libhtscodecs2:amd64=1.2.2-1 libicu71:amd64=71.1-3 libidn2-0:amd64=2.3.2-2 libisl23:amd64=0.24-2 libitm1:amd64=12.1.0-5 libk5crypto3:amd64=1.19.2-2+b2 libkeyutils1:amd64=1.6.3-1 libkrb5-3:amd64=1.19.2-2+b2 libkrb5support0:amd64=1.19.2-2+b2 libldap-2.5-0:amd64=2.5.12+dfsg-2 liblsan0:amd64=12.1.0-5 liblz4-1:amd64=1.9.3-2 liblzma-dev:amd64=5.2.5-2.1 liblzma5:amd64=5.2.5-2.1 libmagic-mgc:amd64=1:5.41-4 libmagic1:amd64=1:5.41-4 libmount1:amd64=2.38-4 libmpc3:amd64=1.2.1-2 libmpfr6:amd64=4.1.0-3 libnettle8:amd64=3.7.3-1 libnghttp2-14:amd64=1.47.0-1+b1 libnsl-dev:amd64=1.3.0-2 libnsl2:amd64=1.3.0-2 libp11-kit0:amd64=0.24.1-1 libpam-modules:amd64=1.4.0-13 libpam-modules-bin:amd64=1.4.0-13 libpam-runtime:all=1.4.0-13 libpam0g:amd64=1.4.0-13 libpcre2-8-0:amd64=10.40-1 libpcre3:amd64=2:8.39-14 libperl5.34:amd64=5.34.0-5 libpipeline1:amd64=1.5.6-1 libpsl5:amd64=0.21.0-1.2 libquadmath0:amd64=12.1.0-5 librtmp1:amd64=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2:amd64=2.1.28+dfsg-6 libsasl2-modules-db:amd64=2.1.28+dfsg-6 libseccomp2:amd64=2.5.4-1 libselinux1:amd64=3.4-1 libsigsegv2:amd64=2.14-1 libsmartcols1:amd64=2.38-4 libssh2-1:amd64=1.10.0-3+b1 libssl3:amd64=3.0.4-2 libstdc++-11-dev:amd64=11.3.0-4 libstdc++6:amd64=12.1.0-5 libsub-override-perl:all=0.09-3 libsystemd0:amd64=251.2-8 libtasn1-6:amd64=4.18.0-4 libtinfo6:amd64=6.3+20220423-2 libtirpc-common:all=1.3.2-2 libtirpc-dev:amd64=1.3.2-2 libtirpc3:amd64=1.3.2-2 libtool:all=2.4.7-4 libtsan0:amd64=11.3.0-4 libubsan1:amd64=12.1.0-5 libuchardet0:amd64=0.0.7-1 libudev1:amd64=251.2-8 libunistring2:amd64=1.0-1 libuuid1:amd64=2.38-4 libxml2:amd64=2.9.14+dfsg-1 libzstd1:amd64=1.5.2+dfsg-1 linux-libc-dev:amd64=5.18.5-1 login:amd64=1:4.11.1+dfsg1-2 lsb-base:all=11.2 m4:amd64=1.4.18-5 make:amd64=4.3-4.1 man-db:amd64=2.10.2-1 mawk:amd64=1.3.4.20200120-3.1 ncurses-base:all=6.3+20220423-2 ncurses-bin:amd64=6.3+20220423-2 patch:amd64=2.7.6-7 perl:amd64=5.34.0-5 perl-base:amd64=5.34.0-5 perl-modules-5.34:all=5.34.0-5 po-debconf:all=1.0.21+nmu1 rpcsvc-proto:amd64=1.4.2-4 sed:amd64=4.8-1 sensible-utils:all=0.0.17 sysvinit-utils:amd64=3.03-1 tar:amd64=1.34+dfsg-1 util-linux:amd64=2.38-4 util-linux-extra:amd64=2.38-4 xz-utils:amd64=5.2.5-2.1 zlib1g:amd64=1:1.2.11.dfsg-4 zlib1g-dev:amd64=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220718T031307Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220718T031307Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220704T033014Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220707T030959Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d ivar=1.3.1+dfsg-5 && mkdir -p /build/ivar-3wT9V2 && dpkg-source --no-check -x /*.dsc /build/ivar-3wT9V2/ivar-1.3.1+dfsg && chown -R builduser:builduser /build/ivar-3wT9V2" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/ivar-3wT9V2/ivar-1.3.1+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1657660304" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/ivar-3wT9V2 /tmp/ivar-1.3.1+dfsg-5cmr7gx18 bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220224T210146Z bookworm main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.Xa82WHmIFS as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.Xa82WHmIFS Reading package lists... Building dependency tree... util-linux is already the newest version (2.37.3-1+b1). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 136 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220224T210146Z bookworm/main amd64 libfakeroot amd64 1.27-1 [48.5 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220224T210146Z bookworm/main amd64 fakeroot amd64 1.27-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 136 kB in 0s (1131 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4693 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.27-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.27-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.27-1_amd64.deb ... Unpacking fakeroot (1.27-1) ... Setting up libfakeroot:amd64 (1.27-1) ... Setting up fakeroot (1.27-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220718T031307Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220718T031307Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220704T033014Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220707T030959Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.Xa82WHmIFS Get:1 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm InRelease [130 kB] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Get:3 http://snapshot.notset.fr/archive/debian/20220704T033014Z bookworm InRelease [130 kB] Get:4 http://snapshot.notset.fr/archive/debian/20220707T030959Z unstable InRelease [165 kB] Ign:5 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm/main Sources Ign:6 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm/main amd64 Packages Ign:5 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm/main Sources Ign:6 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm/main amd64 Packages Ign:5 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm/main Sources Ign:6 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm/main amd64 Packages Get:5 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm/main Sources [12.1 MB] Get:6 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm/main amd64 Packages [11.5 MB] Ign:7 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:8 http://snapshot.notset.fr/archive/debian/20220704T033014Z bookworm/main amd64 Packages Ign:9 http://snapshot.notset.fr/archive/debian/20220707T030959Z unstable/main amd64 Packages Ign:7 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:8 http://snapshot.notset.fr/archive/debian/20220704T033014Z bookworm/main amd64 Packages Ign:9 http://snapshot.notset.fr/archive/debian/20220707T030959Z unstable/main amd64 Packages Ign:7 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:8 http://snapshot.notset.fr/archive/debian/20220704T033014Z bookworm/main amd64 Packages Ign:9 http://snapshot.notset.fr/archive/debian/20220707T030959Z unstable/main amd64 Packages Get:7 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Get:8 http://snapshot.notset.fr/archive/debian/20220704T033014Z bookworm/main amd64 Packages [11.6 MB] Get:9 http://snapshot.notset.fr/archive/debian/20220707T030959Z unstable/main amd64 Packages [12.5 MB] Fetched 59.3 MB in 48s (1244 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.Xa82WHmIFS I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d ivar=1.3.1+dfsg-5 && mkdir -p /build/ivar-3wT9V2 && dpkg-source --no-check -x /*.dsc /build/ivar-3wT9V2/ivar-1.3.1+dfsg && chown -R builduser:builduser /build/ivar-3wT9V2"' exec /tmp/mmdebstrap.Xa82WHmIFS Reading package lists... NOTICE: 'ivar' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/ivar.git Please use: git clone https://salsa.debian.org/med-team/ivar.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 678 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm/main ivar 1.3.1+dfsg-5 (dsc) [2205 B] Get:2 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm/main ivar 1.3.1+dfsg-5 (tar) [630 kB] Get:3 http://snapshot.notset.fr/archive/debian/20220718T031307Z bookworm/main ivar 1.3.1+dfsg-5 (diff) [45.9 kB] Fetched 678 kB in 1s (1104 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'ivar_1.3.1+dfsg-5.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting ivar in /build/ivar-3wT9V2/ivar-1.3.1+dfsg dpkg-source: info: unpacking ivar_1.3.1+dfsg.orig.tar.xz dpkg-source: info: unpacking ivar_1.3.1+dfsg-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Fix-warning.patch dpkg-source: info: applying forward-build-options.patch dpkg-source: info: applying gcc-11.patch dpkg-source: info: applying gcc-11_2.patch dpkg-source: info: applying privacy-breach.patch dpkg-source: info: applying gcc-12.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/ivar-3wT9V2/ivar-1.3.1+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1657660304" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.Xa82WHmIFS dpkg-buildpackage: info: source package ivar dpkg-buildpackage: info: source version 1.3.1+dfsg-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' rm -f data/db/test_ref.fa.fai data/test.gap.fa data/test.gap.qual.txt data/test.indel.tsv data/test.masked_primer_indices.txt data/test.trimmed.masked.bam data/test.trimmed.masked.bam.bai data/test.trimmed.sorted.bam.bai data/test.unmapped.sorted.bam.bai make[1]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' dh_clean debian/rules binary-indep dh binary-indep dh_update_autotools_config -i dh_autoreconf -i configure.ac:12: installing './compile' configure.ac:58: installing './config.guess' configure.ac:58: installing './config.sub' configure.ac:6: installing './install-sh' configure.ac:6: installing './missing' src/Makefile.am: installing './depcomp' parallel-tests: installing './test-driver' dh_auto_configure -i ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gawk... (cached) mawk checking for g++... g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of g++... none checking for gcc... gcc checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking how to run the C preprocessor... gcc -E checking for main in -lhts... no checking for main in -lpthread... no checking for main in -lz... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for unistd.h... (cached) yes checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for inline... inline checking for int16_t... yes checking for int32_t... yes checking for int8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint8_t... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for GNU libc compatible malloc... no checking for GNU libc compatible realloc... no checking for memmove... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating tests/Makefile config.status: creating config.h config.status: executing depfiles commands dh_auto_build -i make -j10 make[1]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' make all-recursive make[2]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' Making all in src make[3]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/src' g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o ivar.o ivar.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o call_consensus_pileup.o call_consensus_pileup.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o alignment.o alignment.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o suffix_tree.o suffix_tree.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o trim_primer_quality.o trim_primer_quality.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o remove_reads_from_amplicon.o remove_reads_from_amplicon.cpp Using built-in specs. g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o call_variants.o call_variants.cpp COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o primer_bed.o primer_bed.cpp COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ivar.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I .. -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 ivar.cpp -quiet -dumpbase ivar.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-securityUsing built-in specs. -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/ccj0yb7D.s COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'suffix_tree.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o allele_functions.o allele_functions.cpp /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I .. -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 suffix_tree.cpp -quiet -dumpbase suffix_tree.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/ccBL6KCf.s Using built-in specs. g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o get_masked_amplicons.o get_masked_amplicons.cpp COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Using built-in specs. Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_consensus_pileup.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I .. -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 call_consensus_pileup.cpp -quiet -dumpbase call_consensus_pileup.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/cc218S7B.s COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'alignment.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I .. -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 alignment.cpp -quiet -dumpbase alignment.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/cc0K5Fxu.s Using built-in specs. COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) Using built-in specs. Using built-in specs. COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'trim_primer_quality.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' COLLECT_GCC=g++ /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quietOFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa -v -IOFFLOAD_TARGET_DEFAULT=1 .Target: x86_64-linux-gnu -IConfigured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 ..Thread model: posix -imultiarch x86_64-linux-gnu -D_GNU_SOURCESupported LTO compression algorithms: zlib -D zstd HAVE_CONFIG_H gcc version 11.3.0 (Debian 11.3.0-4) -D _FORTIFY_SOURCE=2 trim_primer_quality.cpp -quiet -dumpbase trim_primer_quality.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/ccDmE8RN.s COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'allele_functions.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I .. -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 allele_functions.cpp -quiet -dumpbase allele_functions.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/ccHE94mD.s COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'remove_reads_from_amplicon.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I .. -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 remove_reads_from_amplicon.cpp -quiet -dumpbase remove_reads_from_amplicon.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/cclhsZed.s Using built-in specs. GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include End of search list. COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'primer_bed.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I .. -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 primer_bed.cpp -quiet -dumpbase primer_bed.cpp -dumpbase-extGNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, .cppGMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP -mtune=generic -march=x86-64GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/cccFXNk4.s GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Using built-in specs. ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include End of search list. GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" End of search list. ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP End of search list. GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP Supported LTO compression algorithms: zlib zstd GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 gcc version 11.3.0 (Debian 11.3.0-4) ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include End of search list. COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_variants.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I ..GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -DGMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 _FORTIFY_SOURCE=2 call_variants.cpp -quiet -dumpbase call_variants.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/ccMisLfs.s GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include End of search list. GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include End of search list. GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include End of search list. GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP Compiler executable checksum: GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 6120f8a4b4c4ef25103ee64a722de1a4 GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" Compiler executable checksum: 61ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" 20f8a4b4c4ef25103ee64a722de1a4 #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include End of search list. GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 Using built-in specs. Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_masked_amplicons.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I .. -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 get_masked_amplicons.cpp -quiet -dumpbase get_masked_amplicons.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/ccEM6QjS.s Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include End of search list. GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' 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'-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'alignment.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'alignment.' g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o get_common_variants.o get_common_variants.cpp Using built-in specs. COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' 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GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' 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'-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'remove_reads_from_amplicon.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'remove_reads_from_amplicon.' g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o parse_gff.o parse_gff.cpp Using built-in specs. COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'parse_gff.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I .. -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 parse_gff.cpp -quiet -dumpbase parse_gff.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/ccLFyI0w.s GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include End of search list. GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' 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COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ref_seq.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I .. -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 ref_seq.cpp -quiet -dumpbase ref_seq.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/cchxtV9j.s COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'suffix_tree.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' as -v -I . -I .. --gdwarf-5 --64 -o suffix_tree.o /tmp/ccBL6KCf.s GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include End of search list. GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 GNU assembler version 2.38.50 (x86_64-linux-gnu) using BFD version (GNU Binutils for Debian) 2.38.50.20220707 Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'allele_functions.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' as -v -I . -I .. --gdwarf-5 --64 -o allele_functions.o /tmp/ccHE94mD.s GNU assembler version 2.38.50 (x86_64-linux-gnu) using BFD version (GNU Binutils for Debian) 2.38.50.20220707 COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'trim_primer_quality.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' as -v -I . -I .. --gdwarf-5 --64 -o trim_primer_quality.o /tmp/ccDmE8RN.s GNU assembler version 2.38.50 (x86_64-linux-gnu) using BFD version (GNU Binutils for Debian) 2.38.50.20220707 MAKEFLAGS=w -j10 COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'suffix_tree.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'suffix_tree.' MAKEFLAGS=w -j10 COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../:/lib/:/usr/lib/ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -c -o interval_tree.o interval_tree.cpp COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'allele_functions.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'allele_functions.' Using built-in specs. COLLECT_GCC=g++ OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'interval_tree.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/11/cc1plus -quiet -v -I . -I .. -imultiarch x86_64-linux-gnu -D_GNU_SOURCE -D HAVE_CONFIG_H -D _FORTIFY_SOURCE=2 interval_tree.cpp -quiet -dumpbase interval_tree.cpp -dumpbase-ext .cpp -mtune=generic -march=x86-64 -g -g -O2 -Wdate-time -Wformat=1 -Werror=format-security -Wall -Wextra -Werror -std=c++11 -version -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -fasynchronous-unwind-tables -o /tmp/ccJRhrU5.s GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring duplicate directory "/usr/include/x86_64-linux-gnu/c++/11" ignoring nonexistent directory "/usr/local/include/x86_64-linux-gnu" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/include-fixed" ignoring nonexistent directory "/usr/lib/gcc/x86_64-linux-gnu/11/../../../../x86_64-linux-gnu/include" #include "..." search starts here: #include <...> search starts here: . .. /usr/include/c++/11 /usr/include/x86_64-linux-gnu/c++/11 /usr/include/c++/11/backward /usr/lib/gcc/x86_64-linux-gnu/11/include /usr/local/include /usr/include/x86_64-linux-gnu /usr/include End of search list. GNU C++11 (Debian 11.3.0-4) version 11.3.0 (x86_64-linux-gnu) compiled by GNU C version 11.3.0, GMP version 6.2.1, MPFR version 4.1.0, MPC version 1.2.1, isl version isl-0.24-GMP GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 Compiler executable checksum: 6120f8a4b4c4ef25103ee64a722de1a4 MAKEFLAGS=w -j10 COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' 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'-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_variants.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'call_variants.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' 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'-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'primer_bed.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'primer_bed.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_common_variants.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' as -v -I . -I .. --gdwarf-5 --64 -o get_common_variants.o /tmp/cc4GGBc2.s GNU assembler version 2.38.50 (x86_64-linux-gnu) using BFD version (GNU Binutils for Debian) 2.38.50.20220707 COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' 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'-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'get_common_variants.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'get_common_variants.' MAKEFLAGS=w -j10 COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'call_consensus_pileup.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'call_consensus_pileup.' MAKEFLAGS=w -j10 COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ivar.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'ivar.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'interval_tree.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' as -v -I . -I .. --gdwarf-5 --64 -o interval_tree.o /tmp/ccJRhrU5.s GNU assembler version 2.38.50 (x86_64-linux-gnu) using BFD version (GNU Binutils for Debian) 2.38.50.20220707 MAKEFLAGS=w -j10 COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'interval_tree.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'interval_tree.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ref_seq.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' as -v -I . -I .. --gdwarf-5 --64 -o ref_seq.o /tmp/cchxtV9j.s GNU assembler version 2.38.50 (x86_64-linux-gnu) using BFD version (GNU Binutils for Debian) 2.38.50.20220707 MAKEFLAGS=w -j10 COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'ref_seq.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'ref_seq.' COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'parse_gff.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' as -v -I . -I .. --gdwarf-5 --64 -o parse_gff.o /tmp/ccLFyI0w.s GNU assembler version 2.38.50 (x86_64-linux-gnu) using BFD version (GNU Binutils for Debian) 2.38.50.20220707 MAKEFLAGS=w -j10 COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-D' 'HAVE_CONFIG_H' '-I' '.' '-I' '..' '-Wdate-time' '-D' '_FORTIFY_SOURCE=2' '-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-c' '-o' 'parse_gff.o' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'parse_gff.' g++ -g -O2 -ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -v -g -std=c++11 -Wall -Wextra -Werror -Wl,-z,relro -Wl,-z,now -o ivar ivar.o call_consensus_pileup.o alignment.o suffix_tree.o trim_primer_quality.o remove_reads_from_amplicon.o call_variants.o primer_bed.o allele_functions.o get_masked_amplicons.o get_common_variants.o parse_gff.o ref_seq.o interval_tree.o -lhts -lz -lpthread -lhts -lz -lpthread Using built-in specs. COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Debian 11.3.0-4' --with-bugurl=file:///usr/share/doc/gcc-11/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-11 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-bootstrap --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --enable-libphobos-checking=release --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --enable-cet --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-ewFA8U/gcc-11-11.3.0/debian/tmp-gcn/usr --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-build-config=bootstrap-lto-lean --enable-link-serialization=2 Thread model: posix Supported LTO compression algorithms: zlib zstd gcc version 11.3.0 (Debian 11.3.0-4) MAKEFLAGS=w -j10 COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/11/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/11/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-o' 'ivar' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'ivar.' /usr/lib/gcc/x86_64-linux-gnu/11/collect2 -plugin /usr/lib/gcc/x86_64-linux-gnu/11/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-linux-gnu/11/lto-wrapper -plugin-opt=-fresolution=/tmp/ccFNS77X.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -pie -o ivar /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/Scrt1.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/11/crtbeginS.o -L/usr/lib/gcc/x86_64-linux-gnu/11 -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/11/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/11/../../.. -z relro -z now ivar.o call_consensus_pileup.o alignment.o suffix_tree.o trim_primer_quality.o remove_reads_from_amplicon.o call_variants.o primer_bed.o allele_functions.o get_masked_amplicons.o get_common_variants.o parse_gff.o ref_seq.o interval_tree.o -lhts -lz -lpthread -lhts -lz -lpthread -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/11/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/crtn.o COLLECT_GCC_OPTIONS='-g' '-O2' '-ffile-prefix-map=/build/ivar-3wT9V2/ivar-1.3.1+dfsg=.' '-fstack-protector-strong' '-Wformat=1' '-Werror=format-security' '-v' '-g' '-std=c++11' '-Wall' '-Wextra' '-Werror' '-o' 'ivar' '-shared-libgcc' '-mtune=generic' '-march=x86-64' '-dumpdir' 'ivar.' make[3]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/src' Making all in tests make[3]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/tests' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/tests' make[3]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' make[3]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' make[2]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' make[1]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' create-stamp debian/debhelper-build-stamp dh_prep -i dh_auto_install -i make -j10 install DESTDIR=/build/ivar-3wT9V2/ivar-1.3.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' Making install in src make[2]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/src' make[3]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/src' make[3]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/debian/tmp/usr/bin' /usr/bin/install -c ivar '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/debian/tmp/usr/bin' make[3]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/src' make[2]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/src' Making install in tests make[2]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/tests' make[3]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/tests' make[2]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg/tests' make[2]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' make[3]: Entering directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' make[2]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' make[1]: Leaving directory '/build/ivar-3wT9V2/ivar-1.3.1+dfsg' dh_install -i dh_installdocs -i dh_installchangelogs -i dh_installexamples -i dh_installman -i dh_perl -i dh_link -i dh_strip_nondeterminism -i dh_compress -i dh_fixperms -i dh_missing -i dh_installdeb -i dh_gencontrol -i dh_md5sums -i dh_builddeb -i dpkg-deb: building package 'ivar-doc' in '../ivar-doc_1.3.1+dfsg-5_all.deb'. dpkg-genbuildinfo --build=all -O../ivar_1.3.1+dfsg-5_all.buildinfo dpkg-genchanges --build=all -O../ivar_1.3.1+dfsg-5_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/ivar-3wT9V2 /tmp/ivar-1.3.1+dfsg-5cmr7gx18 I: cleaning package lists and apt cache... I: removing tempdir /tmp/mmdebstrap.Xa82WHmIFS... I: success in 419.8411 seconds md5: ivar-doc_1.3.1+dfsg-5_all.deb: OK sha1: ivar-doc_1.3.1+dfsg-5_all.deb: OK sha256: ivar-doc_1.3.1+dfsg-5_all.deb: OK Checksums: OK