Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/i/igv/igv_2.12.0+dfsg-1_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/igv-2.12.0+dfsg-1l85upzw9/igv_2.12.0+dfsg-1_all.buildinfo Get source package info: igv=2.12.0+dfsg-1 Source URL: http://snapshot.notset.fr/mr/package/igv/2.12.0+dfsg-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=adduser=3.118 adwaita-icon-theme=41.0-1 ant=1.10.12-1 ant-optional=1.10.12-1 antlr=2.7.7+dfsg-12 autoconf=2.71-2 automake=1:1.16.5-1.1 autopoint=0.21-4 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6 binutils=2.37.90.20220130-2 binutils-common=2.37.90.20220130-2 binutils-x86-64-linux-gnu=2.37.90.20220130-2 bnd=5.0.1-3 bsdextrautils=2.37.3-1+b1 bsdutils=1:2.37.3-1+b1 build-essential=12.9 bzip2=1.0.8-5 ca-certificates=20211016 ca-certificates-java=20190909 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.2.0-16 dash=0.5.11+git20210903+057cd650a4ed-3 dbus=1.12.20-3 dbus-bin=1.12.20-3 dbus-daemon=1.12.20-3 dbus-session-bus-common=1.12.20-3 dbus-system-bus-common=1.12.20-3 dbus-user-session=1.12.20-3 dconf-gsettings-backend=0.40.0-3 dconf-service=0.40.0-3 dctrl-tools=2.24-3+b1 debconf=1.5.79 debhelper=13.6 debianutils=5.7-0.1 default-jdk=2:1.11-72 default-jdk-headless=2:1.11-72 default-jre=2:1.11-72 default-jre-headless=2:1.11-72 devscripts=2.22.1 dh-autoreconf=20 dh-strip-nondeterminism=1.13.0-1 dictionaries-common=1.28.14 diffutils=1:3.7-5 dirmngr=2.2.27-3 dmsetup=2:1.02.175-2.1 dpkg=1.21.1 dpkg-dev=1.21.1 dwz=0.14-1 emacsen-common=3.0.4 fakeroot=1.27-1 file=1:5.41-2 findutils=4.8.0-1 fontconfig=2.13.1-4.4 fontconfig-config=2.13.1-4.4 fonts-dejavu-core=2.37-2 g++=4:11.2.0-2 g++-11=11.2.0-16 gcc=4:11.2.0-2 gcc-11=11.2.0-16 gcc-11-base=11.2.0-16 gettext=0.21-4 gettext-base=0.21-4 glib-networking=2.70.1-1 glib-networking-common=2.70.1-1 glib-networking-services=2.70.1-1 gnupg=2.2.27-3 gnupg-l10n=2.2.27-3 gnupg-utils=2.2.27-3 gpg=2.2.27-3 gpg-agent=2.2.27-3 gpg-wks-client=2.2.27-3 gpg-wks-server=2.2.27-3 gpgconf=2.2.27-3 gpgsm=2.2.27-3 gpgv=2.2.27-3 gradle=4.4.1-13 gradle-debian-helper=2.1 grep=3.7-1 groff-base=1.22.4-8 groovy=2.4.21-1 gsettings-desktop-schemas=42~alpha-1 gtk-update-icon-cache=3.24.31-1 gzip=1.10-4 hicolor-icon-theme=0.17-2 hostname=3.23 hunspell-en-us=1:2020.12.07-2 imagemagick-6-common=8:6.9.11.60+dfsg-1.3 init-system-helpers=1.61 inkscape=1.1.1-3 intltool-debian=0.35.0+20060710.5 ivy=2.5.0-2 java-common=0.72 java-wrappers=0.3 javahelper=0.78 junit4=4.13.2-1 lib2geom1.1.0=1.1-2+b1 libacl1=2.3.1-1 libantlr-java=2.7.7+dfsg-12 libaom3=3.2.0-2 libaopalliance-java=20070526-6 libapache-pom-java=18-1 libapparmor1=3.0.3-6 libarchive-zip-perl=1.68-1 libargon2-1=0~20171227-0.2 libasan6=11.2.0-16 libasm-java=9.2-1 libasound2=1.2.6.1-1 libasound2-data=1.2.6.1-1 libaspell15=0.60.8-4 libassuan0=2.5.5-1 libatinject-jsr330-api-java=1.0+ds1-5 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libclass-xsaccessor-perl=1.19-3+b8 libcodec2-1.0=1.0.1-3 libcolord2=1.4.5-3 libcolt-free-java=1.2.0+dfsg-7 libcom-err2=1.46.5-2 libcommons-beanutils-java=1.9.4-1 libcommons-cli-java=1.4-2 libcommons-codec-java=1.15-1 libcommons-collections3-java=3.2.2-2 libcommons-compress-java=1.21-1 libcommons-configuration-java=1.10-5 libcommons-exec-java=1.3-2 libcommons-io-java=2.11.0-2 libcommons-jexl2-java=2.1.1-5 libcommons-lang-java=2.6-9 libcommons-lang3-java=3.11-1 libcommons-logging-java=1.2-2 libcommons-math-java=2.2-8 libcommons-math3-java=3.6.1-3 libcommons-parent-java=43-1 libconcurrent-java=1.3.4-4.1 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libcryptsetup12=2:2.4.3-1 libctf-nobfd0=2.37.90.20220130-2 libctf0=2.37.90.20220130-2 libcups2=2.3.3op2-7 libdatrie1=0.2.13-2 libdav1d5=0.9.2-1+b1 libdb5.3=5.3.28+dfsg1-0.8 libdbus-1-3=1.12.20-3 libdbus-glib-1-2=0.112-2 libdconf1=0.40.0-3 libdd-plist-java=1.20-1.1 libde265-0=1.0.8-1 libdebconfclient0=0.261 libdebhelper-perl=13.6 libdeflate0=1.9-1 libdevel-callchecker-perl=0.008-1+b3 libdevmapper1.02.1=2:1.02.175-2.1 libdom4j-java=2.1.3-1 libdouble-conversion3=3.1.7-4 libdpkg-perl=1.21.1 libdrm-amdgpu1=2.4.109-2 libdrm-common=2.4.109-2 libdrm-intel1=2.4.109-2 libdrm-nouveau2=2.4.109-2 libdrm-radeon1=2.4.109-2 libdrm2=2.4.109-2 libdsiutils-java=2.6.17+dfsg-1 libdynaloader-functions-perl=0.003-1.1 libeclipse-jdt-annotation-java=2.2.600+eclipse4.21-1 libedit2=3.1-20210910-1 libel-api-java=3.0.0-3 libelf1=0.186-1 libenchant-2-2=2.3.2-1 libencode-locale-perl=1.05-1.1 libepoxy0=1.5.9-2 libexpat1=2.4.4-1 libfakeroot=1.27-1 libfastutil-java=8.5.6+dfsg-1 libfdisk1=2.37.3-1+b1 libfelix-framework-java=4.6.1-2.1 libfelix-gogo-runtime-java=0.16.2-1.1 libfelix-resolver-java=1.16.0-1 libfest-assert-java=2.0~M10-1.1 libfest-reflect-java=1.4.1-4 libfest-util-java=1.2.5-1.1 libffi8=3.4.2-4 libfftw3-double3=3.3.8-2 libfile-dirlist-perl=0.05-2 libfile-homedir-perl=1.006-1 libfile-listing-perl=6.14-1 libfile-stripnondeterminism-perl=1.13.0-1 libfile-touch-perl=0.12-1 libfile-which-perl=1.23-1 libfindbugs-java=3.1.0~preview2-3 libfontconfig1=2.13.1-4.4 libfreetype6=2.11.1+dfsg-1 libfribidi0=1.0.8-2 libgc1=1:8.0.6-1.1 libgcc-11-dev=11.2.0-16 libgcc-s1=11.2.0-16 libgcrypt20=1.9.4-5 libgdbm-compat4=1.22-1 libgdbm6=1.22-1 libgdk-pixbuf-2.0-0=2.42.6+dfsg-2 libgdk-pixbuf2.0-common=2.42.6+dfsg-2 libgeronimo-annotation-1.3-spec-java=1.3-1 libgeronimo-interceptor-3.0-spec-java=1.0.1-4 libgif7=5.1.9-2 libgl1=1.4.0-1 libgl1-mesa-dri=21.3.5-1 libglapi-mesa=21.3.5-1 libglib2.0-0=2.70.3-1 libglibmm-2.4-1v5=2.66.2-2+b1 libglvnd0=1.4.0-1 libglx-mesa0=21.3.5-1 libglx0=1.4.0-1 libgme0=0.6.3-2 libgmp10=2:6.2.1+dfsg-3 libgnutls30=3.7.3-4+b1 libgoby-io-java=3.3.1+dfsg2-7 libgomp1=11.2.0-16 libgoogle-gson-java=2.8.8-1 libgpg-error0=1.43-3 libgradle-core-java=4.4.1-13 libgradle-plugins-java=4.4.1-13 libgraphite2-3=1.3.14-1 libgsl27=2.7.1+dfsg-3 libgslcblas0=2.7.1+dfsg-3 libgsm1=1.0.19-1 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libsensors-config=1:3.6.0-7 libsensors5=1:3.6.0-7 libsepol2=3.3-1 libservlet-api-java=4.0.1-2 libservlet3.1-java=1:4.0.1-2 libshine3=3.1.1-2 libsigc++-2.0-0v5=2.10.4-2 libsigsegv2=2.14-1 libsimple-http-java=4.1.21-1.1 libsisu-inject-java=0.3.4-2 libsisu-plexus-java=0.3.4-3 libslf4j-java=1.7.32-1 libsmartcols1=2.37.3-1+b1 libsnappy-java=1.1.8.3-1 libsnappy-jni=1.1.8.3-1 libsnappy1v5=1.1.8-1 libsodium23=1.0.18-1 libsoup2.4-1=2.74.2-3 libsoup2.4-common=2.74.2-3 libsoxr0=0.1.3-4 libspeex1=1.2~rc1.2-1.1 libsqlite3-0=3.37.2-2 libsrt1.4-gnutls=1.4.2-1.4 libssh-gcrypt-4=0.9.6-2 libssl1.1=1.1.1m-1 libstdc++-11-dev=11.2.0-16 libstdc++6=11.2.0-16 libsub-override-perl=0.09-2 libsub-quote-perl=2.006006-1 libswing-layout-java=1.0.4-4.1 libswresample3=7:4.4.1-3 libsystemd0=250.3-2 libtasn1-6=4.18.0-4 libtext-iconv-perl=1.7-7+b2 libthai-data=0.1.29-1 libthai0=0.1.29-1 libtheora0=1.1.1+dfsg.1-15 libtiff5=4.3.0-3 libtimedate-perl=2.3300-2 libtinfo6=6.3-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.6-15 libtry-tiny-perl=0.31-1 libtsan0=11.2.0-16 libtwolame0=0.4.0-2 libubsan1=11.2.0-16 libuchardet0=0.0.7-1 libudev1=250.3-2 libudfread0=1.1.2-1 libunistring2=0.9.10-6 liburi-perl=5.10-1 libuuid1=2.37.3-1+b1 libva-drm2=2.13.0-1 libva-x11-2=2.13.0-1 libva2=2.13.0-1 libvdpau1=1.4-3 libvisio-0.1-1=0.1.7-1+b1 libvorbis0a=1.3.7-1 libvorbisenc2=1.3.7-1 libvorbisfile3=1.3.7-1 libvpx7=1.11.0-2 libvulkan1=1.2.198.1-2 libwagon-file-java=3.3.4-1 libwagon-http-java=3.3.4-1 libwagon-provider-api-java=3.3.4-1 libwayland-client0=1.20.0-1 libwayland-cursor0=1.20.0-1 libwayland-egl1=1.20.0-1 libwebp6=0.6.1-2.1 libwebpdemux2=0.6.1-2.1 libwebpmux3=0.6.1-2.1 libwebsocket-api-java=1.1-2 libwpd-0.10-10=0.10.3-2 libwpg-0.3-3=0.3.3-1 libwww-perl=6.61-1 libwww-robotrules-perl=6.02-1 libx11-6=2:1.7.2-2+b1 libx11-data=2:1.7.2-2 libx11-xcb1=2:1.7.2-2+b1 libx264-160=2:0.160.3011+gitcde9a93-2.1+b1 libx265-199=3.5-2 libxalan2-java=2.7.2-4 libxau6=1:1.0.9-1 libxbean-reflect-java=4.5-8 libxcb-dri2-0=1.14-3 libxcb-dri3-0=1.14-3 libxcb-glx0=1.14-3 libxcb-present0=1.14-3 libxcb-render0=1.14-3 libxcb-shm0=1.14-3 libxcb-sync1=1.14-3 libxcb-xfixes0=1.14-3 libxcb1=1.14-3 libxcomposite1=1:0.4.5-1 libxcursor1=1:1.2.0-2 libxdamage1=1:1.1.5-2 libxdmcp6=1:1.1.2-3 libxerces2-java=2.12.1-1 libxext6=2:1.3.4-1 libxfixes3=1:6.0.0-1 libxi6=2:1.8-1 libxinerama1=2:1.1.4-3 libxkbcommon0=1.3.1-1 libxml-commons-external-java=1.4.01-5 libxml-commons-resolver1.1-java=1.2-11 libxml2=2.9.12+dfsg-5+b1 libxmlgraphics-commons-java=2.6-1 libxpp3-java=1.1.4c-3 libxrandr2=2:1.5.2-1 libxrender1=1:0.9.10-1 libxshmfence1=1.3-1 libxslt1.1=1.1.34-4 libxstream-java=1.4.18-2 libxtst6=2:1.2.3-1 libxvidcore4=2:1.3.7-1 libxxf86vm1=1:1.1.4-1+b2 libxz-java=1.9-1 libyaml-snake-java=1.29-1 libz3-4=4.8.12-1+b1 libzmq5=4.3.4-2 libzstd1=1.4.8+dfsg-3 libzvbi-common=0.2.35-19 libzvbi0=0.2.35-19 linux-libc-dev=5.16.7-1 login=1:4.11.1+dfsg1-1 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.0-2 maven-repo-helper=1.10 mawk=1.3.4.20200120-3+b1 media-types=5.0.0 mount=2.37.3-1+b1 ncurses-base=6.3-2 ncurses-bin=6.3-2 netbase=6.3 ocl-icd-libopencl1=2.2.14-3 openjdk-11-jdk=11.0.14+9-1 openjdk-11-jdk-headless=11.0.14+9-1 openjdk-11-jre=11.0.14+9-1 openjdk-11-jre-headless=11.0.14+9-1 openjfx=11.0.11+0-1 openssl=1.1.1m-1 passwd=1:4.11.1+dfsg1-1 patch=2.7.6-7 patchutils=0.4.2-1 perl=5.34.0-3 perl-base=5.34.0-3 perl-modules-5.34=5.34.0-3 perl-openssl-defaults=5 pinentry-curses=1.1.0-4 po-debconf=1.0.21+nmu1 python3=3.9.8-1 python3-minimal=3.9.8-1 python3.9=3.9.10-1 python3.9-minimal=3.9.10-1 readline-common=8.1.2-1 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 shared-mime-info=2.1-2 systemd=250.3-2 systemd-sysv=250.3-2 sysvinit-utils=3.01-1 tar=1.34+dfsg-1 testng=6.9.12-4 tzdata=2021e-1 ucf=3.0043 unzip=6.0-26 util-linux=2.37.3-1+b1 wdiff=1.2.2-2+b1 x11-common=1:7.7+23 xkb-data=2.33-1 xz-utils=5.2.5-2 zlib1g=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220215T025613Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220215T025613Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220227T085321Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220206T214258Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d igv=2.12.0+dfsg-1 && mkdir -p /build/igv-69IHHW && dpkg-source --no-check -x /*.dsc /build/igv-69IHHW/igv-2.12.0+dfsg && chown -R builduser:builduser /build/igv-69IHHW" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/igv-69IHHW/igv-2.12.0+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1644423239" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/igv-69IHHW /tmp/igv-2.12.0+dfsg-1l85upzw9 bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220206T214258Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.9xD_gXGSMs as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.9xD_gXGSMs Reading package lists... Building dependency tree... util-linux is already the newest version (2.37.3-1+b1). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 136 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220206T214258Z unstable/main amd64 libfakeroot amd64 1.27-1 [48.5 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220206T214258Z unstable/main amd64 fakeroot amd64 1.27-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 136 kB in 0s (859 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4697 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.27-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.27-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.27-1_amd64.deb ... Unpacking fakeroot (1.27-1) ... Setting up libfakeroot:amd64 (1.27-1) ... Setting up fakeroot (1.27-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-5) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220215T025613Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220215T025613Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220227T085321Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20220206T214258Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.9xD_gXGSMs Get:1 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm InRelease [129 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220227T085321Z unstable InRelease [165 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20220206T214258Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm/main Sources [11.8 MB] Get:5 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm/main amd64 Packages [11.2 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20220227T085321Z unstable/main amd64 Packages Err:6 http://snapshot.notset.fr/archive/debian/20220227T085321Z unstable/main amd64 Packages 404 Not Found [IP: 10.13.0.253 80] Ign:6 http://snapshot.notset.fr/archive/debian/20220227T085321Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20220227T085321Z unstable/main amd64 Packages [12.2 MB] Fetched 35.6 MB in 30s (1204 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.9xD_gXGSMs I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d igv=2.12.0+dfsg-1 && mkdir -p /build/igv-69IHHW && dpkg-source --no-check -x /*.dsc /build/igv-69IHHW/igv-2.12.0+dfsg && chown -R builduser:builduser /build/igv-69IHHW"' exec /tmp/mmdebstrap.9xD_gXGSMs Reading package lists... NOTICE: 'igv' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/igv.git Please use: git clone https://salsa.debian.org/med-team/igv.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 37.9 MB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm/main igv 2.12.0+dfsg-1 (dsc) [2546 B] Get:2 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm/main igv 2.12.0+dfsg-1 (tar) [37.8 MB] Get:3 http://snapshot.notset.fr/archive/debian/20220215T025613Z bookworm/main igv 2.12.0+dfsg-1 (diff) [32.4 kB] Fetched 37.9 MB in 30s (1277 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'igv_2.12.0+dfsg-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting igv in /build/igv-69IHHW/igv-2.12.0+dfsg dpkg-source: info: unpacking igv_2.12.0+dfsg.orig.tar.xz dpkg-source: info: unpacking igv_2.12.0+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying gradle_dependencies.patch dpkg-source: info: applying skip_tests_network.patch dpkg-source: info: applying using_home_made_icons.patch dpkg-source: info: applying old_gradle_name.patch dpkg-source: info: applying jide_dependency.patch dpkg-source: info: applying omit_aws_stuff.patch dpkg-source: info: applying omit_spark_in_tests.patch dpkg-source: info: applying dont_parse_glat_output_in_tests.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/igv-69IHHW/igv-2.12.0+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1644423239" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.9xD_gXGSMs dpkg-buildpackage: info: source package igv dpkg-buildpackage: info: source version 2.12.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . debian/rules clean dh clean --buildsystem=gradle --with javahelper dh_auto_clean -O--buildsystem=gradle sh -c "find . -wholename .*build/tmp | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" sh -c "find . -wholename .*build/debian | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" rm -Rf /build/igv-69IHHW/igv-2.12.0\+dfsg/.gradle /build/igv-69IHHW/igv-2.12.0\+dfsg/buildSrc/.gradle .m2 dh_autoreconf_clean -O--buildsystem=gradle jh_clean -O--buildsystem=gradle debian/rules override_dh_clean make[1]: Entering directory '/build/igv-69IHHW/igv-2.12.0+dfsg' if [ -e src/main/resources/log4j.xml ] ; then rm src/main/resources/log4j.xml ; fi if [ -e src/main/resources-icons ]; then \ rm -rf src/main/resources-icons ; \ fi dh_clean make[1]: Leaving directory '/build/igv-69IHHW/igv-2.12.0+dfsg' debian/rules binary-indep dh binary-indep --buildsystem=gradle --with javahelper dh_update_autotools_config -i -O--buildsystem=gradle dh_autoreconf -i -O--buildsystem=gradle debian/rules override_dh_auto_configure make[1]: Entering directory '/build/igv-69IHHW/igv-2.12.0+dfsg' cp debian/log4j.xml src/main/resources/ # Converting my home-made svg icons into png ones cd debian/icons && \ inkscape -o Home24.png Home24.svg && \ inkscape -o Refresh24.png Refresh24.svg && \ inkscape -o Stop16.png Stop16.svg && \ inkscape -o ZoomIn24.png ZoomIn24.svg && \ inkscape -o ZoomOut24.png ZoomOut24.svg && \ mkdir ../../src/main/resources-icons && \ mv *.png ../../src/main/resources-icons/ ** (process:2540533): WARNING **: 14:30:38.435: Unable to create profile directory (Permission denied) (13) ** Message: 14:30:38.453: Cannot create profile directory /nonexistent/.config/inkscape. ** Message: 14:30:38.453: Inkscape will run with default settings, and new settings will not be saved. Failed to get connection ** (inkscape:2540533): CRITICAL **: 14:30:38.465: dbus_g_proxy_new_for_name: assertion 'connection != NULL' failed ** (inkscape:2540533): CRITICAL **: 14:30:38.465: dbus_g_proxy_call: assertion 'DBUS_IS_G_PROXY (proxy)' failed ** (inkscape:2540533): CRITICAL **: 14:30:38.465: dbus_g_connection_register_g_object: assertion 'connection != NULL' failed ** (inkscape:2540533): WARNING **: 14:30:38.726: Could not create directory '/nonexistent/.config/inkscape' ** (inkscape:2540533): WARNING **: 14:30:38.726: Could not create extension error log file '/nonexistent/.config/inkscape/extension-errors.log' Background RRGGBBAA: ffffff00 Area 0:0:24:24 exported to 24 x 24 pixels (96 dpi) ** (process:2540545): WARNING **: 14:30:39.002: Unable to create profile directory (Permission denied) (13) ** Message: 14:30:39.021: Cannot create profile directory /nonexistent/.config/inkscape. ** Message: 14:30:39.021: Inkscape will run with default settings, and new settings will not be saved. Failed to get connection ** (inkscape:2540545): CRITICAL **: 14:30:39.030: dbus_g_proxy_new_for_name: assertion 'connection != NULL' failed ** (inkscape:2540545): CRITICAL **: 14:30:39.030: dbus_g_proxy_call: assertion 'DBUS_IS_G_PROXY (proxy)' failed ** (inkscape:2540545): CRITICAL **: 14:30:39.030: dbus_g_connection_register_g_object: assertion 'connection != NULL' failed ** (inkscape:2540545): WARNING **: 14:30:39.273: Could not create directory '/nonexistent/.config/inkscape' ** (inkscape:2540545): WARNING **: 14:30:39.274: Could not create extension error log file '/nonexistent/.config/inkscape/extension-errors.log' Background RRGGBBAA: ffffff00 Area 0:0:24:24 exported to 24 x 24 pixels (96 dpi) ** (process:2540557): WARNING **: 14:30:39.521: Unable to create profile directory (Permission denied) (13) ** Message: 14:30:39.536: Cannot create profile directory /nonexistent/.config/inkscape. ** Message: 14:30:39.536: Inkscape will run with default settings, and new settings will not be saved. Failed to get connection ** (inkscape:2540557): CRITICAL **: 14:30:39.544: dbus_g_proxy_new_for_name: assertion 'connection != NULL' failed ** (inkscape:2540557): CRITICAL **: 14:30:39.544: dbus_g_proxy_call: assertion 'DBUS_IS_G_PROXY (proxy)' failed ** (inkscape:2540557): CRITICAL **: 14:30:39.544: dbus_g_connection_register_g_object: assertion 'connection != NULL' failed ** (inkscape:2540557): WARNING **: 14:30:39.735: Could not create directory '/nonexistent/.config/inkscape' ** (inkscape:2540557): WARNING **: 14:30:39.735: Could not create extension error log file '/nonexistent/.config/inkscape/extension-errors.log' Background RRGGBBAA: ffffff00 Area 0:0:16:16 exported to 16 x 16 pixels (96 dpi) ** (process:2540569): WARNING **: 14:30:39.969: Unable to create profile directory (Permission denied) (13) ** Message: 14:30:39.987: Cannot create profile directory /nonexistent/.config/inkscape. ** Message: 14:30:39.987: Inkscape will run with default settings, and new settings will not be saved. Failed to get connection ** (inkscape:2540569): CRITICAL **: 14:30:39.997: dbus_g_proxy_new_for_name: assertion 'connection != NULL' failed ** (inkscape:2540569): CRITICAL **: 14:30:39.997: dbus_g_proxy_call: assertion 'DBUS_IS_G_PROXY (proxy)' failed ** (inkscape:2540569): CRITICAL **: 14:30:39.997: dbus_g_connection_register_g_object: assertion 'connection != NULL' failed ** (inkscape:2540569): WARNING **: 14:30:40.255: Could not create directory '/nonexistent/.config/inkscape' ** (inkscape:2540569): WARNING **: 14:30:40.255: Could not create extension error log file '/nonexistent/.config/inkscape/extension-errors.log' Background RRGGBBAA: ffffff00 Area 0:0:24:24 exported to 24 x 24 pixels (96 dpi) ** (process:2540581): WARNING **: 14:30:40.462: Unable to create profile directory (Permission denied) (13) ** Message: 14:30:40.482: Cannot create profile directory /nonexistent/.config/inkscape. ** Message: 14:30:40.482: Inkscape will run with default settings, and new settings will not be saved. Failed to get connection ** (inkscape:2540581): CRITICAL **: 14:30:40.491: dbus_g_proxy_new_for_name: assertion 'connection != NULL' failed ** (inkscape:2540581): CRITICAL **: 14:30:40.491: dbus_g_proxy_call: assertion 'DBUS_IS_G_PROXY (proxy)' failed ** (inkscape:2540581): CRITICAL **: 14:30:40.491: dbus_g_connection_register_g_object: assertion 'connection != NULL' failed ** (inkscape:2540581): WARNING **: 14:30:40.757: Could not create directory '/nonexistent/.config/inkscape' ** (inkscape:2540581): WARNING **: 14:30:40.757: Could not create extension error log file '/nonexistent/.config/inkscape/extension-errors.log' Background RRGGBBAA: ffffff00 Area 0:0:24:24 exported to 24 x 24 pixels (96 dpi) make[1]: Leaving directory '/build/igv-69IHHW/igv-2.12.0+dfsg' jh_linkjars -i -O--buildsystem=gradle dh_auto_build -i -O--buildsystem=gradle mkdir -p .gradle/init.d cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=igv -Dfile.encoding=UTF-8 --parallel --max-workers=10 jar Initialized native services in: /build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/native Using 10 worker leases. Creating new cache for fileHashes, path /build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@58670130 Creating new cache for resourceHashesCache, path /build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@58670130 Creating new cache for fileHashes, path /build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@7d61eccf WARNING: An illegal reflective access operation has occurred WARNING: Illegal reflective access using Lookup on org.gradle.internal.reflect.JavaMethod (file:/usr/share/gradle/lib/gradle-base-services-4.4.1.jar) to class java.lang.ClassLoader WARNING: Please consider reporting this to the maintainers of org.gradle.internal.reflect.JavaMethod WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations WARNING: All illegal access operations will be denied in a future release Starting Build Compiling initialization script '/build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/init.d/init.gradle' using SubsetScriptTransformer. Creating new cache for metadata-1.1/results, path /build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@338766de Compiling initialization script '/build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/init.d/init.gradle' using BuildScriptTransformer. Compiling settings file '/build/igv-69IHHW/igv-2.12.0+dfsg/settings.gradle' using SubsetScriptTransformer. Compiling settings file '/build/igv-69IHHW/igv-2.12.0+dfsg/settings.gradle' using BuildScriptTransformer. Settings evaluated using settings file '/build/igv-69IHHW/igv-2.12.0+dfsg/settings.gradle'. Projects loaded. Root project using build file '/build/igv-69IHHW/igv-2.12.0+dfsg/build.gradle'. Included projects: [root project 'igv'] Keep-alive timer started Adding Debian repository to project 'igv' Parallel execution is an incubating feature. Evaluating root project 'igv' using build file '/build/igv-69IHHW/igv-2.12.0+dfsg/build.gradle'. Compiling build file '/build/igv-69IHHW/igv-2.12.0+dfsg/build.gradle' using SubsetScriptTransformer. Creating new cache for metadata-2.36/module-metadata, path /build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@641ed324 Loading the Maven rules... Ignoring net.sf.proguard:proguard-gradle:jar:6.1.1 Compiling build file '/build/igv-69IHHW/igv-2.12.0+dfsg/build.gradle' using BuildScriptTransformer. Replacing com.google.code.gson:gson:jar:2.8.5 -> com.google.code.gson:gson:jar:debian Passing through com.google.code.gson:gson-parent:jar:debian Replacing org.apache.commons:commons-math3:jar:3.6.1 -> org.apache.commons:commons-math3:jar:debian Replacing commons-io:commons-io:jar:2.6 -> commons-io:commons-io:jar:debian Passing through org.apache.commons:commons-parent:jar:debian Passing through org.apache:apache:jar:debian Replacing org.apache.commons:commons-compress:jar:1.18 -> org.apache.commons:commons-compress:jar:debian Replacing org.xerial.snappy:snappy-java:jar:1.1.7.3 -> org.xerial.snappy:snappy-java:jar:debian Replacing org.apache.commons:commons-jexl:jar:2.1.1 -> org.apache.commons:commons-jexl:jar:debian Replacing org.apache.commons:commons-lang3:jar:3.9 -> org.apache.commons:commons-lang3:jar:debian Replacing com.github.samtools:htsjdk:jar:2.24.1 -> com.github.samtools:htsjdk:jar:debian Replacing org.swinglabs:swing-layout:jar:1.0.3 -> org.swinglabs:swing-layout:jar:debian Passing through com.jidesoft:jide-oss:jar:debian Replacing com.google.guava:guava:jar:27.0.1-jre -> com.google.guava:guava:jar:debian Passing through com.google.guava:guava-parent:jar:debian Replacing org.apache.xmlgraphics:batik-dom:jar:1.11 -> org.apache.xmlgraphics:batik-dom:jar:debian Passing through org.apache.xmlgraphics:batik:jar:debian Replacing org.apache.xmlgraphics:batik-svggen:jar:1.11 -> org.apache.xmlgraphics:batik-svggen:jar:debian Replacing org.apache.xmlgraphics:batik-codec:jar:1.11 -> org.apache.xmlgraphics:batik-codec:jar:debian Replacing org.netbeans.external:AbsoluteLayout:jar:RELEASE110 -> org.netbeans.external:AbsoluteLayout:jar:debian Ignoring software.amazon.awssdk:cognitoidentity:jar:2.16.7 Ignoring software.amazon.awssdk:sts:jar:2.16.7 Ignoring software.amazon.awssdk:s3:jar:2.16.7 Passing through commons-logging:commons-logging:jar:debian Passing through gov.nih.nlm.ncbi:ngs-java:jar:debian Passing through org.jsr-305:jsr305:jar:0.x Passing through org.apache.xmlgraphics:batik-ext:jar:debian Passing through org.apache.xmlgraphics:batik-shared-resources:jar:debian Passing through org.apache.xmlgraphics:batik-util:jar:debian Passing through org.apache.xmlgraphics:batik-xml:jar:debian Passing through org.apache.xmlgraphics:batik-awt-util:jar:debian Passing through org.apache.xmlgraphics:batik-transcoder:jar:debian Passing through org.apache.xmlgraphics:batik-constants:jar:debian Passing through org.apache.xmlgraphics:batik-i18n:jar:debian Passing through org.apache.xmlgraphics:xmlgraphics-commons:jar:debian file or directory '/build/igv-69IHHW/igv-2.12.0+dfsg/lib', not found Adding Maven pom generation to project 'igv' Linking the generated javadoc to the system JDK API documentation All projects evaluated. Selected primary task 'jar' from project : Creating new cache for annotation-processors, path /build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@5d20195b Tasks to be executed: [task ':compileJava', task ':processResources', task ':classes', task ':debianMavenPom', task ':jar'] Creating new cache for resourceHashesCache, path /build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@7d61eccf Creating new cache for taskHistory, path /build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@3faa55 Creating new cache for outputFiles, path /build/igv-69IHHW/igv-2.12.0+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@5b32e0b1 :compileJava (Thread[main,5,main]) started. :compileJava Putting task artifact state for task ':compileJava' into context took 0.011 secs. file or directory '/build/igv-69IHHW/igv-2.12.0+dfsg/lib', not found file or directory '/build/igv-69IHHW/igv-2.12.0+dfsg/lib', not found Up-to-date check for task ':compileJava' took 34.605 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':compileJava'. file or directory '/build/igv-69IHHW/igv-2.12.0+dfsg/lib', not found file or directory '/build/igv-69IHHW/igv-2.12.0+dfsg/lib', not found Compiling with JDK Java compiler API. Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. :compileJava (Thread[main,5,main]) completed. Took 56.324 secs. :processResources (Thread[main,5,main]) started. :processResources Putting task artifact state for task ':processResources' into context took 0.0 secs. Up-to-date check for task ':processResources' took 0.242 secs. It is not up-to-date because: No history is available. :processResources (Thread[main,5,main]) completed. Took 0.724 secs. :classes (Thread[main,5,main]) started. :classes Skipping task ':classes' as it has no actions. :classes (Thread[main,5,main]) completed. Took 0.001 secs. :debianMavenPom (Thread[main,5,main]) started. :debianMavenPom Putting task artifact state for task ':debianMavenPom' into context took 0.0 secs. Up-to-date check for task ':debianMavenPom' took 0.002 secs. It is not up-to-date because: No history is available. Generating pom file /build/igv-69IHHW/igv-2.12.0+dfsg/build/debian/igv.pom :debianMavenPom (Thread[main,5,main]) completed. Took 0.21 secs. :jar (Thread[main,5,main]) started. :jar Putting task artifact state for task ':jar' into context took 0.0 secs. Up-to-date check for task ':jar' took 0.064 secs. It is not up-to-date because: No history is available. :jar (Thread[main,5,main]) completed. Took 1.155 secs. BUILD SUCCESSFUL in 1m 7s 4 actionable tasks: 4 executed jh_build -i -O--buildsystem=gradle dh: command-omitted: The call to "dh_auto_test -i -O--buildsystem=gradle" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -i -O--buildsystem=gradle dh_prep -i -O--buildsystem=gradle debian/rules override_dh_auto_install make[1]: Entering directory '/build/igv-69IHHW/igv-2.12.0+dfsg' dh_auto_install # Installing the icon of the software. mkdir -p debian/igv/usr/share/icons/hicolor/64x64/apps/ cp src/main/resources/org/broad/igv/ui/resources/IGV_64.png debian/igv/usr/share/icons/hicolor/64x64/apps/igv.png make[1]: Leaving directory '/build/igv-69IHHW/igv-2.12.0+dfsg' dh_install -i -O--buildsystem=gradle jh_installjavadoc -i -O--buildsystem=gradle dh_installdocs -i -O--buildsystem=gradle dh_installchangelogs -i -O--buildsystem=gradle dh_installman -i -O--buildsystem=gradle dh_installsystemduser -i -O--buildsystem=gradle dh_icons -i -O--buildsystem=gradle dh_perl -i -O--buildsystem=gradle dh_link -i -O--buildsystem=gradle jh_installlibs -i -O--buildsystem=gradle jh_classpath -i -O--buildsystem=gradle jh_manifest -i -O--buildsystem=gradle jh_exec -i -O--buildsystem=gradle jh_depends -i -O--buildsystem=gradle dh_strip_nondeterminism -i -O--buildsystem=gradle dh_compress -i -O--buildsystem=gradle dh_fixperms -i -O--buildsystem=gradle dh_missing -i -O--buildsystem=gradle dh_installdeb -i -O--buildsystem=gradle dh_gencontrol -i -O--buildsystem=gradle dh_md5sums -i -O--buildsystem=gradle dh_builddeb -i -O--buildsystem=gradle dpkg-deb: building package 'igv' in '../igv_2.12.0+dfsg-1_all.deb'. dpkg-genbuildinfo --build=all -O../igv_2.12.0+dfsg-1_all.buildinfo dpkg-genchanges --build=all -O../igv_2.12.0+dfsg-1_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/igv-69IHHW /tmp/igv-2.12.0+dfsg-1l85upzw9 I: cleaning package lists and apt cache... W: deleting files in /tmp: hsperfdata_root W: deleting files in /tmp: hsperfdata_builduser I: removing tempdir /tmp/mmdebstrap.9xD_gXGSMs... I: success in 1224.0696 seconds md5: igv_2.12.0+dfsg-1_all.deb: OK sha1: igv_2.12.0+dfsg-1_all.deb: OK sha256: igv_2.12.0+dfsg-1_all.deb: OK Checksums: OK