Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/h/h5py/h5py_3.3.0-3_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/h5py-3.3.0-3wu1jhq0u/h5py_3.3.0-3_all.buildinfo Get source package info: h5py=3.3.0-3 Source URL: http://snapshot.notset.fr/mr/package/h5py/3.3.0-3/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=adduser=3.118 autoconf=2.71-2 automake=1:1.16.4-2 autopoint=0.21-4 autotools-dev=20180224.1+nmu1 base-files=12 base-passwd=3.5.52 bash=5.1-3+b1 binutils=2.37-7 binutils-common=2.37-7 binutils-x86-64-linux-gnu=2.37-7 bsdextrautils=2.37.2-3 bsdutils=1:2.37.2-3 build-essential=12.9 bzip2=1.0.8-4 ca-certificates=20210119 coreutils=8.32-4+b1 cpp=4:10.2.1-1 cpp-10=10.3.0-11 cython3=0.29.21-3+b1 dash=0.5.11+git20210120+802ebd4-1 debconf=1.5.77 debhelper=13.5.2 debianutils=5.5-1 dh-autoreconf=20 dh-python=4.20201102+nmu1 dh-strip-nondeterminism=1.12.0-1 diffutils=1:3.7-5 docutils-common=0.16+dfsg-4 dpkg=1.20.9 dpkg-dev=1.20.9 dwz=0.14-1 file=1:5.39-3 findutils=4.8.0-1 fonts-mathjax=2.7.9+dfsg-1 g++=4:10.2.1-1 g++-10=10.3.0-11 gcc=4:10.2.1-1 gcc-10=10.3.0-11 gcc-10-base=10.3.0-11 gcc-11-base=11.2.0-8 gettext=0.21-4 gettext-base=0.21-4 gfortran-10=10.3.0-11 grep=3.7-1 groff-base=1.22.4-7 gzip=1.10-4 hdf5-helpers=1.10.7+repack-1 hostname=3.23 ibverbs-providers=36.0-1 init-system-helpers=1.60 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libaec-dev=1.0.6-1 libaec0=1.0.6-1 libarchive-zip-perl=1.68-1 libasan6=11.2.0-8 libatomic1=11.2.0-8 libattr1=1:2.5.1-1 libaudit-common=1:3.0.5-1 libaudit1=1:3.0.5-1 libbinutils=2.37-7 libblas3=3.10.0-1 libblkid1=2.37.2-3 libbsd0=0.11.3-1 libbz2-1.0=1.0.8-4 libc-bin=2.32-4 libc-dev-bin=2.32-4 libc6=2.32-4 libc6-dev=2.32-4 libcap-ng0=0.7.9-2.2+b1 libcap2=1:2.44-1 libcbor0=0.5.0+dfsg-2 libcc1-0=11.2.0-8 libcom-err2=1.46.4-1 libcrypt-dev=1:4.4.25-2 libcrypt1=1:4.4.25-2 libctf-nobfd0=2.37-7 libctf0=2.37-7 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.260 libdebhelper-perl=13.5.2 libdpkg-perl=1.20.9 libedit2=3.1-20210910-1 libelf1=0.185-2 libevent-2.1-7=2.1.12-stable-1 libevent-core-2.1-7=2.1.12-stable-1 libevent-dev=2.1.12-stable-1 libevent-extra-2.1-7=2.1.12-stable-1 libevent-openssl-2.1-7=2.1.12-stable-1 libevent-pthreads-2.1-7=2.1.12-stable-1 libexpat1=2.4.1-2+b1 libexpat1-dev=2.4.1-2+b1 libfabric1=1.11.0-2 libffi8=3.4.2-2 libfido2-1=1.8.0-1 libfile-stripnondeterminism-perl=1.12.0-1 libgcc-10-dev=10.3.0-11 libgcc-s1=11.2.0-8 libgcrypt20=1.9.4-3+b1 libgdbm-compat4=1.21-1 libgdbm6=1.21-1 libgfortran-10-dev=10.3.0-11 libgfortran5=11.2.0-8 libglib2.0-0=2.70.0-1+b1 libgmp10=2:6.2.1+dfsg-2 libgomp1=11.2.0-8 libgpg-error0=1.42-3 libgssapi-krb5-2=1.18.3-7 libhdf5-103-1=1.10.7+repack-1 libhdf5-cpp-103-1=1.10.7+repack-1 libhdf5-dev=1.10.7+repack-1 libhdf5-fortran-102=1.10.7+repack-1 libhdf5-hl-100=1.10.7+repack-1 libhdf5-hl-cpp-100=1.10.7+repack-1 libhdf5-hl-fortran-100=1.10.7+repack-1 libhdf5-mpi-dev=1.10.7+repack-1 libhdf5-openmpi-103-1=1.10.7+repack-1 libhdf5-openmpi-cpp-103-1=1.10.7+repack-1 libhdf5-openmpi-dev=1.10.7+repack-1 libhdf5-openmpi-fortran-102=1.10.7+repack-1 libhdf5-openmpi-hl-100=1.10.7+repack-1 libhdf5-openmpi-hl-cpp-100=1.10.7+repack-1 libhdf5-openmpi-hl-fortran-100=1.10.7+repack-1 libhwloc-dev=2.5.0+dfsg-2 libhwloc-plugins=2.5.0+dfsg-2 libhwloc15=2.5.0+dfsg-2 libibverbs-dev=36.0-1 libibverbs1=36.0-1 libicu67=67.1-7 libisl23=0.23-1 libitm1=11.2.0-8 libjpeg-dev=1:2.0.6-4 libjpeg62-turbo=1:2.0.6-4 libjpeg62-turbo-dev=1:2.0.6-4 libjs-jquery=3.5.1+dfsg+~3.5.5-7 libjs-jquery-ui=1.12.1+dfsg-8 libjs-mathjax=2.7.9+dfsg-1 libjs-sphinxdoc=4.2.0-2 libjs-underscore=1.9.1~dfsg-4 libk5crypto3=1.18.3-7 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-7 libkrb5support0=1.18.3-7 liblapack3=3.10.0-1 liblsan0=11.2.0-8 libltdl-dev=2.4.6-15 libltdl7=2.4.6-15 liblz4-1=1.9.3-2 liblzf-dev=3.6-3 liblzf1=3.6-3 liblzma5=5.2.5-2 libmagic-mgc=1:5.39-3 libmagic1=1:5.39-3 libmd0=1.0.3-3 libmount1=2.37.2-3 libmpc3=1.2.0-1 libmpdec3=2.5.1-2 libmpfr6=4.1.0-3 libncursesw6=6.2+20210905-1 libnl-3-200=3.4.0-1+b1 libnl-3-dev=3.4.0-1+b1 libnl-route-3-200=3.4.0-1+b1 libnl-route-3-dev=3.4.0-1+b1 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libnuma-dev=2.0.14-3 libnuma1=2.0.14-3 libopenmpi-dev=4.1.2~rc1-4 libopenmpi3=4.1.2~rc1-4 libpam-modules=1.4.0-10 libpam-modules-bin=1.4.0-10 libpam-runtime=1.4.0-10 libpam0g=1.4.0-10 libpciaccess0=0.16-1 libpcre2-8-0=10.36-2 libpcre3=2:8.39-13 libperl5.32=5.32.1-6 libpipeline1=1.5.3-1 libpmix-dev=4.1.1~rc2-1 libpmix2=4.1.1~rc2-1 libpsm-infinipath1=3.3+20.604758e7-6.1 libpsm2-2=11.2.185-1 libpython3-all-dev=3.9.2-3 libpython3-dev=3.9.2-3 libpython3-stdlib=3.9.2-3 libpython3.9=3.9.7-4 libpython3.9-dev=3.9.7-4 libpython3.9-minimal=3.9.7-4 libpython3.9-stdlib=3.9.7-4 libquadmath0=11.2.0-8 librdmacm1=36.0-1 libreadline8=8.1-2 libseccomp2=2.5.2-1 libselinux1=3.1-3 libsemanage-common=3.1-1 libsemanage1=3.1-1+b2 libsepol1=3.1-1 libsigsegv2=2.13-1 libsmartcols1=2.37.2-3 libsqlite3-0=3.36.0-2 libssl1.1=1.1.1l-1 libstdc++-10-dev=10.3.0-11 libstdc++6=11.2.0-8 libsub-override-perl=0.09-2 libsystemd0=247.9-3 libsz2=1.0.6-1 libtinfo6=6.2+20210905-1 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.6-15 libtsan0=11.2.0-8 libubsan1=11.2.0-8 libuchardet0=0.0.7-1 libucx0=1.11.2~rc1-2 libudev1=247.9-3 libunistring2=0.9.10-6 libuuid1=2.37.2-3 libx11-6=2:1.7.2-2+b1 libx11-data=2:1.7.2-2 libxau6=1:1.0.9-1 libxcb1=1.14-3 libxdmcp6=1:1.1.2-3 libxext6=2:1.3.4-1 libxml2=2.9.12+dfsg-5 libxnvctrl0=470.57.02-2 libzstd1=1.4.8+dfsg-2.1 linux-libc-dev=5.14.6-3 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.9.4-2 mawk=1.3.4.20200120-2 media-types=4.0.0 mpi-default-bin=1.14 mpi-default-dev=1.14 ncurses-base=6.2+20210905-1 ncurses-bin=6.2+20210905-1 ocl-icd-libopencl1=2.2.14-3 openmpi-bin=4.1.2~rc1-4 openmpi-common=4.1.2~rc1-4 openssh-client=1:8.4p1-6 openssl=1.1.1l-1 passwd=1:4.8.1-1 patch=2.7.6-7 perl=5.32.1-6 perl-base=5.32.1-6 perl-modules-5.32=5.32.1-6 pkg-config=0.29.2-1 po-debconf=1.0.21+nmu1 python-babel-localedata=2.8.0+dfsg.1-7 python3=3.9.2-3 python3-alabaster=0.7.12-1 python3-all=3.9.2-3 python3-all-dev=3.9.2-3 python3-attr=20.3.0-1 python3-babel=2.8.0+dfsg.1-7 python3-cached-property=1.5.2-1 python3-certifi=2020.6.20-1 python3-chardet=4.0.0-1 python3-dev=3.9.2-3 python3-distutils=3.9.7-1 python3-docutils=0.16+dfsg-4 python3-idna=2.10-1 python3-imagesize=1.2.0-2 python3-importlib-metadata=4.6.4-1 python3-iniconfig=1.1.1-1 python3-jinja2=2.11.3-1 python3-lib2to3=3.9.7-1 python3-linecache2=1.0.0-4 python3-markupsafe=1.1.1-1+b3 python3-minimal=3.9.2-3 python3-more-itertools=4.2.0-3 python3-mpi4py=3.1.1-8 python3-numpy=1:1.19.5-1 python3-packaging=20.9-2 python3-pkg-resources=52.0.0-4 python3-pkgconfig=1.5.5-1 python3-pluggy=0.13.0-7 python3-py=1.10.0-1 python3-pygments=2.7.1+dfsg-2.1 python3-pyparsing=2.4.7-1 python3-pytest=6.2.5-1 python3-pytest-mpi=0.5-3 python3-requests=2.25.1+dfsg-2 python3-roman=2.0.0-5 python3-setuptools=52.0.0-4 python3-six=1.16.0-2 python3-snowballstemmer=2.1.0-2 python3-sphinx=4.2.0-2 python3-toml=0.10.2-1 python3-traceback2=1.4.0-6 python3-tz=2021.1-1 python3-unittest2=1.1.0-7 python3-urllib3=1.26.5-1~exp1 python3-zipp=1.0.0-3 python3.9=3.9.7-4 python3.9-dev=3.9.7-4 python3.9-minimal=3.9.7-4 readline-common=8.1-2 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sgml-base=1.30 sphinx-common=4.2.0-2 sysvinit-utils=3.00-1 tar=1.34+dfsg-1 tzdata=2021b-1 util-linux=2.37.2-3 xml-core=0.18+nmu1 xz-utils=5.2.5-2 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20211012T024642Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20211012T024642Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210930T210616Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d h5py=3.3.0-3 && mkdir -p /build/h5py-4oDXhT && dpkg-source --no-check -x /*.dsc /build/h5py-4oDXhT/h5py-3.3.0 && chown -R builduser:builduser /build/h5py-4oDXhT" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/h5py-4oDXhT/h5py-3.3.0 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1633010417" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/h5py-4oDXhT /tmp/h5py-3.3.0-3wu1jhq0u bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20210930T210616Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.T3I1GxGGYe as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.T3I1GxGGYe Reading package lists... Building dependency tree... util-linux is already the newest version (2.37.2-3). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20210930T210616Z unstable/main amd64 libfakeroot amd64 1.26-1 [47.3 kB] Get:2 http://snapshot.notset.fr/archive/debian/20210930T210616Z unstable/main amd64 fakeroot amd64 1.26-1 [87.1 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (680 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4668 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.26-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.26-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.26-1_amd64.deb ... Unpacking fakeroot (1.26-1) ... Setting up libfakeroot:amd64 (1.26-1) ... Setting up fakeroot (1.26-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.32-4) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20211012T024642Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20211012T024642Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210930T210616Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.T3I1GxGGYe Get:1 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm InRelease [128 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20210930T210616Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm/main Sources [11.7 MB] Get:4 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm/main amd64 Packages [11.2 MB] Fetched 23.0 MB in 19s (1180 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.T3I1GxGGYe I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d h5py=3.3.0-3 && mkdir -p /build/h5py-4oDXhT && dpkg-source --no-check -x /*.dsc /build/h5py-4oDXhT/h5py-3.3.0 && chown -R builduser:builduser /build/h5py-4oDXhT"' exec /tmp/mmdebstrap.T3I1GxGGYe Reading package lists... NOTICE: 'h5py' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/h5py.git Please use: git clone https://salsa.debian.org/science-team/h5py.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 401 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm/main h5py 3.3.0-3 (dsc) [2729 B] Get:2 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm/main h5py 3.3.0-3 (tar) [380 kB] Get:3 http://snapshot.notset.fr/archive/debian/20211012T024642Z bookworm/main h5py 3.3.0-3 (diff) [17.7 kB] Fetched 401 kB in 0s (1062 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'h5py_3.3.0-3.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting h5py in /build/h5py-4oDXhT/h5py-3.3.0 dpkg-source: info: unpacking h5py_3.3.0.orig.tar.gz dpkg-source: info: unpacking h5py_3.3.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying No-rpath.patch dpkg-source: info: applying No-intersphinx.patch dpkg-source: info: applying test-skip-test_float_round_tripping.patch dpkg-source: info: applying skip-test-ppc64el.patch dpkg-source: info: applying python3-dbg_skip_file_test_exception.patch dpkg-source: info: applying build_flavour.patch dpkg-source: info: applying stop_circular_dep.patch dpkg-source: info: applying tests_as_local_build.patch dpkg-source: info: applying use_system_lzf.patch dpkg-source: info: applying numpy_min_version.patch dpkg-source: info: applying skip_test_selection_assertion.patch dpkg-source: info: applying update_mpi4py.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/h5py-4oDXhT/h5py-3.3.0 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1633010417" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.T3I1GxGGYe dpkg-buildpackage: info: source package h5py dpkg-buildpackage: info: source version 3.3.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-source: info: using options from h5py-3.3.0/debian/source/options: --extend-diff-ignore=^[^/]+\.egg-info/ fakeroot debian/rules clean dh clean --with python3,sphinxdoc --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/h5py-4oDXhT/h5py-3.3.0' dh_auto_clean -D build-h5py_serial || /bin/true dh_auto_clean: error: invalid or non-existing path to the source directory: build-h5py_serial dh_auto_clean -D build-h5py_mpi || /bin/true dh_auto_clean: error: invalid or non-existing path to the source directory: build-h5py_mpi /usr/bin/make -C docs clean make[2]: Entering directory '/build/h5py-4oDXhT/h5py-3.3.0/docs' rm -rf _build/* make[2]: Leaving directory '/build/h5py-4oDXhT/h5py-3.3.0/docs' /usr/bin/make -C docs_api clean make[2]: Entering directory '/build/h5py-4oDXhT/h5py-3.3.0/docs_api' rm -rf _build/* make[2]: Leaving directory '/build/h5py-4oDXhT/h5py-3.3.0/docs_api' make[1]: Leaving directory '/build/h5py-4oDXhT/h5py-3.3.0' dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/build/h5py-4oDXhT/h5py-3.3.0' dh_clean rm -rf build-h5py_serial build-h5py_mpi make[1]: Leaving directory '/build/h5py-4oDXhT/h5py-3.3.0' debian/rules build-indep dh build-indep --with python3,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_autoreconf -i -O--buildsystem=pybuild debian/rules override_dh_auto_configure make[1]: Entering directory '/build/h5py-4oDXhT/h5py-3.3.0' mkdir build-h5py_serial; bash -O extglob -c "cp -ra ./!(build-h5py_serial) build-h5py_serial" sed "s/'h5py'/'h5py._debian_h5py_serial'/g; s/'h5py._hl'/'h5py._debian_h5py_serial._hl'/g; s/'h5py.tests/'h5py._debian_h5py_serial.tests/g; s/'h5py.x/'h5py._debian_h5py_serial.x/g" -i build-h5py_serial/setup.py sed "s/flavour=''/flavour='_debian_h5py_serial'/" -i build-h5py_serial/setup_build.py mv build-h5py_serial/h5py build-h5py_serial/_debian_h5py_serial cp -r debian/wrapper_module/h5py build-h5py_serial mv build-h5py_serial/_debian_h5py_serial build-h5py_serial/h5py mkdir build-h5py_mpi; bash -O extglob -c "cp -ra ./!(build-h5py_serial|build-h5py_mpi) build-h5py_mpi" sed "s/'h5py'/'h5py._debian_h5py_mpi'/g; s/'h5py._hl'/'h5py._debian_h5py_mpi._hl'/g; s/'h5py.tests/'h5py._debian_h5py_mpi.tests/g; s/'h5py.x/'h5py._debian_h5py_mpi.x/g" -i build-h5py_mpi/setup.py sed "s/flavour=''/flavour='_debian_h5py_mpi'/" -i build-h5py_mpi/setup_build.py mv build-h5py_mpi/h5py build-h5py_mpi/_debian_h5py_mpi cp -r debian/wrapper_module/h5py build-h5py_mpi mv build-h5py_mpi/_debian_h5py_mpi build-h5py_mpi/h5py make[1]: Leaving directory '/build/h5py-4oDXhT/h5py-3.3.0' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/h5py-4oDXhT/h5py-3.3.0' PYBUILD_NAME=h5py_mpi CC=h5pcc HDF5_MPI=ON HDF5_PKGCONFIG_NAME=hdf5-mpi H5PY_SYSTEM_LZF=1 dh_auto_build -D build-h5py_mpi I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py creating /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py creating /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi copying h5py/_debian_h5py_mpi/__init__.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi copying h5py/_debian_h5py_mpi/h5py_warnings.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi copying h5py/_debian_h5py_mpi/ipy_completer.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi copying h5py/_debian_h5py_mpi/version.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi creating /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/__init__.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/attrs.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/base.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/compat.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/dataset.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/datatype.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/dims.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/files.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/filters.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/group.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/selections.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/selections2.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl copying h5py/_debian_h5py_mpi/_hl/vds.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_hl creating /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/common.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/conftest.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_attribute_create.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_attrs.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_base.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_big_endian_file.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_completions.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_dataset.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_dataset_getitem.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_dataset_swmr.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_datatype.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_dimension_scales.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_dims_dimensionproxy.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_errors.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_file.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_file_image.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_filters.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_group.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_h5.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_h5d_direct_chunk.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_h5f.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_h5o.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_h5p.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_h5pl.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_h5t.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_objects.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_slicing.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_dtype.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_attrs_data.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_file2.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/__init__.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests copying h5py/_debian_h5py_mpi/tests/test_selections.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests creating /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests/data_files copying h5py/_debian_h5py_mpi/tests/data_files/__init__.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests/data_files creating /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests/test_vds copying h5py/_debian_h5py_mpi/tests/test_vds/__init__.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests/test_vds copying h5py/_debian_h5py_mpi/tests/test_vds/test_highlevel_vds.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests/test_vds copying h5py/_debian_h5py_mpi/tests/test_vds/test_lowlevel_vds.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests/test_vds copying h5py/_debian_h5py_mpi/tests/test_vds/test_virtual_source.py -> /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/tests/test_vds running build_ext Loading library to get build settings and version: /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so ******************************************************************************** Summary of the h5py configuration HDF5 include dirs: [ '/usr/include/hdf5/openmpi' '/usr/lib/x86_64-linux-gnu/openmpi/include' '/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi' ] HDF5 library dirs: [ '/usr/lib/x86_64-linux-gnu/hdf5/openmpi' '/usr/lib/x86_64-linux-gnu/openmpi/lib' ] HDF5 Version: (1, 10, 7) MPI Enabled: True ROS3 VFD Enabled: False Rebuild Required: True ******************************************************************************** Executing api_gen rebuild of defs Executing cythonize() [ 1/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.pyx [ 2/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.pyx [ 3/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_objects.pyx [ 4/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_proxy.pyx [ 5/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_selector.pyx [ 6/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/defs.pyx [ 7/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5.pyx [ 8/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5a.pyx [ 9/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ac.pyx [10/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5d.pyx [11/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ds.pyx [12/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5f.pyx [13/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5fd.pyx [14/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5g.pyx [15/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5i.pyx [16/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5l.pyx [17/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5o.pyx [18/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.pyx [19/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5pl.pyx [20/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5r.pyx [21/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5s.pyx [22/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5t.pyx [23/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5z.pyx [24/24] Cythonizing /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/utils.pyx building 'h5py._debian_h5py_mpi.defs' extension creating build creating build/temp.linux-x86_64-3.9 creating build/temp.linux-x86_64-3.9/build creating build/temp.linux-x86_64-3.9/build/h5py-4oDXhT creating build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0 creating build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi creating build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py creating build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/defs.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/defs.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/defs.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_4defs_H5Pget_driver_info’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/defs.c:27222:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 27222 | __pyx_v_r = H5Pget_driver_info(__pyx_v_plist_id); | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/defs.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/defs.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi._errors' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_7_errors_walk_cb’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.c:1957:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 1957 | __pyx_t_3 = (__pyx_v_desc[0]).desc; | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_7_errors_set_exception’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.c:2078:64: warning: passing argument 3 of ‘H5Ewalk2’ from incompatible pointer type [-Wincompatible-pointer-types] 2078 | __pyx_t_1 = ((H5Ewalk(((hid_t)H5E_DEFAULT), H5E_WALK_UPWARD, __pyx_f_4h5py_16_debian_h5py_mpi_7_errors_walk_cb, (&__pyx_v_err)) < 0) != 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | herr_t (*)(int, H5E_error2_t *, void *) {aka int (*)(int, H5E_error2_t *, void *)} In file included from /usr/include/hdf5/openmpi/hdf5.h:26, from /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/api_compat.h:27, from /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.c:667: /usr/include/hdf5/openmpi/H5Epublic.h:169:80: note: expected ‘H5E_walk2_t’ {aka ‘int (*)(unsigned int, const H5E_error2_t *, void *)’} but argument is of type ‘herr_t (*)(int, H5E_error2_t *, void *)’ {aka ‘int (*)(int, H5E_error2_t *, void *)’} 169 | H5_DLL herr_t H5Ewalk2(hid_t err_stack, H5E_direction_t direction, H5E_walk2_t func, | ~~~~~~~~~~~~^~~~ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.c:2277:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2277 | __pyx_t_8 = __pyx_v_err.err.desc; | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.c:2328:66: warning: passing argument 3 of ‘H5Ewalk2’ from incompatible pointer type [-Wincompatible-pointer-types] 2328 | __pyx_t_1 = ((H5Ewalk(((hid_t)H5E_DEFAULT), H5E_WALK_DOWNWARD, __pyx_f_4h5py_16_debian_h5py_mpi_7_errors_walk_cb, (&__pyx_v_err)) < 0) != 0); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | herr_t (*)(int, H5E_error2_t *, void *) {aka int (*)(int, H5E_error2_t *, void *)} In file included from /usr/include/hdf5/openmpi/hdf5.h:26, from /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/api_compat.h:27, from /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.c:667: /usr/include/hdf5/openmpi/H5Epublic.h:169:80: note: expected ‘H5E_walk2_t’ {aka ‘int (*)(unsigned int, const H5E_error2_t *, void *)’} but argument is of type ‘herr_t (*)(int, H5E_error2_t *, void *)’ {aka ‘int (*)(int, H5E_error2_t *, void *)’} 169 | H5_DLL herr_t H5Ewalk2(hid_t err_stack, H5E_direction_t direction, H5E_walk2_t func, | ~~~~~~~~~~~~^~~~ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.c:2360:13: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 2360 | __pyx_t_8 = __pyx_v_err.err.desc; | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_errors.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_errors.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi._objects' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_objects.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_objects.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_objects.c: In function ‘__pyx_pf_4h5py_16_debian_h5py_mpi_8_objects_9FastRLock_6release’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_objects.c:3076:38: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘long unsigned int’ [-Wsign-compare] 3076 | __pyx_t_1 = ((__pyx_v_self->_owner != PyThread_get_thread_ident()) != 0); | ^~ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_objects.c: In function ‘__pyx_pf_4h5py_16_debian_h5py_mpi_8_objects_9FastRLock_10__exit__’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_objects.c:3294:38: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘long unsigned int’ [-Wsign-compare] 3294 | __pyx_t_1 = ((__pyx_v_self->_owner != PyThread_get_thread_ident()) != 0); | ^~ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_objects.c: In function ‘__pyx_pf_4h5py_16_debian_h5py_mpi_8_objects_9FastRLock_12_is_owned’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_objects.c:3387:59: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘long unsigned int’ [-Wsign-compare] 3387 | __pyx_t_1 = __Pyx_PyBool_FromLong((__pyx_v_self->_owner == PyThread_get_thread_ident())); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 63, __pyx_L1_error) | ^~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_objects.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_objects.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi._proxy' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_proxy.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_proxy.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_proxy.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_proxy.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5fd' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5fd.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5fd.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5fd.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_4h5fd_H5FD_fileobj_read’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5fd.c:3548:29: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 3548 | __pyx_t_6 = ((__pyx_t_9 == __pyx_v_size) != 0); | ^~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5fd.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5fd.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5z' extension creating build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5z.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5z.o h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf/lzf_filter.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf/lzf_filter.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5z.o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf/lzf_filter.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5z.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5i' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5i.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5i.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5i.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5i.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5r' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5r.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5r.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5r.c: In function ‘__pyx_pf_4h5py_16_debian_h5py_mpi_3h5r_9Reference_2__nonzero__’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5r.c:3233:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 3233 | for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5r.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5r.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.utils' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/utils.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/utils.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/utils.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_5utils_convert_tuple’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/utils.c:2716:27: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2716 | __pyx_t_2 = ((__pyx_t_1 != __pyx_v_rank) != 0); | ^~ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/utils.c:2766:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2766 | for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/utils.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_5utils_convert_dims’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/utils.c:2958:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 2958 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/utils.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/utils.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi._selector' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_selector.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_selector.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_selector.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_9_selector_convert_bools’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_selector.c:3068:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘hsize_t’ {aka ‘long long unsigned int’} [-Wsign-compare] 3068 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_selector.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_selector.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi._conv' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_5_conv_generic_converter’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c:3554:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 3554 | for (__pyx_t_8 = 0; __pyx_t_8 < __pyx_t_7; __pyx_t_8+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c:3620:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 3620 | for (__pyx_t_8 = 0; __pyx_t_8 < __pyx_t_7; __pyx_t_8+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_5_conv_enum_int_converter_conv’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c:7030:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 7030 | for (__pyx_t_8 = 0; __pyx_t_8 < __pyx_t_7; __pyx_t_8+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c:7093:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 7093 | for (__pyx_t_8 = 0; __pyx_t_8 < __pyx_t_7; __pyx_t_8+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_5_conv_vlen2ndarray’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c:7787:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 7787 | for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c:7853:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 7853 | for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_5_conv_conv_vlen2ndarray’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c:7941:57: warning: variable ‘__pyx_v_in_vlen0’ set but not used [-Wunused-but-set-variable] 7941 | struct __pyx_t_4h5py_16_debian_h5py_mpi_5_conv_vlen_t __pyx_v_in_vlen0; | ^~~~~~~~~~~~~~~~ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_5_conv_ndarray2vlen’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c:8404:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 8404 | for (__pyx_t_10 = 0; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c:8629:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 8629 | for (__pyx_t_10 = 0; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.c:8695:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 8695 | for (__pyx_t_10 = 0; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) { | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/_conv.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/_conv.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5t' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5t.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5t.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5t.c: In function ‘__pyx_f_4h5py_16_debian_h5py_mpi_3h5t__c_compound’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5t.c:18959:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 18959 | if (((__pyx_t_12 > __pyx_t_9) != 0)) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5t.c:18979:40: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 18979 | __pyx_t_11 = ((__pyx_v_member_offset > __pyx_cur_scope->__pyx_v_dt->elsize) != 0); | ^ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5t.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5t.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5s' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5s.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5s.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5s.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5s.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5p' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.c: In function ‘__pyx_pf_4h5py_16_debian_h5py_mpi_3h5p_8PropDCID_22set_filter’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.c:9161:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 9161 | for (__pyx_t_1 = 0; __pyx_t_1 < __pyx_t_8; __pyx_t_1+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.c: In function ‘__pyx_pf_4h5py_16_debian_h5py_mpi_3h5p_8PropDCID_28get_filter’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.c:9537:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 9537 | for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.c: In function ‘__pyx_pf_4h5py_16_debian_h5py_mpi_3h5p_8PropDCID_32get_filter_by_id’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.c:9977:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 9977 | for (__pyx_t_10 = 0; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) { | ^ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.c: In function ‘__Pyx_PyInt_As_hbool_t’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.c:38782:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38782 | return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.c:38800:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38800 | return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.c:38818:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 38818 | return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5p.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5p.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5d' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5d.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5d.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5d.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5d.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5a' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5a.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5a.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5a.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5a.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5f' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5f.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5f.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5f.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5f.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5g' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5g.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5g.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5g.c: In function ‘__pyx_pf_4h5py_16_debian_h5py_mpi_3h5g_7GroupID_22__contains__’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5g.c:7218:56: warning: variable ‘__pyx_v_new_handler’ set but not used [-Wunused-but-set-variable] 7218 | __pyx_t_4h5py_16_debian_h5py_mpi_7_errors_err_cookie __pyx_v_new_handler; | ^~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5g.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5g.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5l' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5l.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5l.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5l.c: In function ‘__pyx_pf_4h5py_16_debian_h5py_mpi_3h5l_9LinkProxy_12get_val’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5l.c:4581:126: warning: passing argument 4 of ‘__pyx_f_4h5py_16_debian_h5py_mpi_4defs_H5Lunpack_elink_val’ from incompatible pointer type [-Wincompatible-pointer-types] 4581 | __pyx_t_1 = __pyx_f_4h5py_16_debian_h5py_mpi_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(__pyx_t_1 == ((herr_t)((herr_t)-1L)))) __PYX_ERR(1, 187, __pyx_L5_error) | ~^~~~~~~~~~~~~~~~~~~~~~~ | | | char ** /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5l.c:4581:126: note: expected ‘const char **’ but argument is of type ‘char **’ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5l.c:4581:152: warning: passing argument 5 of ‘__pyx_f_4h5py_16_debian_h5py_mpi_4defs_H5Lunpack_elink_val’ from incompatible pointer type [-Wincompatible-pointer-types] 4581 | __pyx_t_1 = __pyx_f_4h5py_16_debian_h5py_mpi_4defs_H5Lunpack_elink_val(__pyx_v_buf, __pyx_v_buf_size, (&__pyx_v_wtf), (&__pyx_v_ext_file_name), (&__pyx_v_ext_obj_name)); if (unlikely(__pyx_t_1 == ((herr_t)((herr_t)-1L)))) __PYX_ERR(1, 187, __pyx_L5_error) | ~^~~~~~~~~~~~~~~~~~~~~~ | | | char ** /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5l.c:4581:152: note: expected ‘const char **’ but argument is of type ‘char **’ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5l.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5l.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5o' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5o.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5o.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5o.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5o.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5ds' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ds.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ds.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ds.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5ds.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5ac' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ac.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ac.o /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ac.c: In function ‘__Pyx_PyInt_As_hbool_t’: /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ac.c:10722:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 10722 | return (hbool_t) (((hbool_t)-1)*(((((hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ac.c:10740:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 10740 | return (hbool_t) (((hbool_t)-1)*(((((((hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ac.c:10758:60: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context] 10758 | return (hbool_t) (((hbool_t)-1)*(((((((((hbool_t)digits[3]) << PyLong_SHIFT) | (hbool_t)digits[2]) << PyLong_SHIFT) | (hbool_t)digits[1]) << PyLong_SHIFT) | (hbool_t)digits[0]))); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5ac.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5ac.cpython-39-x86_64-linux-gnu.so building 'h5py._debian_h5py_mpi.h5pl' extension h5pcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DH5_USE_18_API -DNPY_NO_DEPRECATED_API=0 -I./h5py/_debian_h5py_mpi -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/lzf -I/usr/include/liblzf -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/mpi4py/include -I/usr/include/python3.9 -c /build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5pl.c -o build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5pl.o x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.9/build/h5py-4oDXhT/h5py-3.3.0/build-h5py_mpi/h5py/_debian_h5py_mpi/h5pl.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lhdf5_hl -llzf -o /build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build/h5py/_debian_h5py_mpi/h5pl.cpython-39-x86_64-linux-gnu.so for DIR in $(find .pybuild/cpython3*mpi -name build); do \ cp -r /build/h5py-4oDXhT/h5py-3.3.0/debian/wrapper_module/h5py/* $DIR/h5py/; \ done cd build-h5py_mpi/lzf; cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/h5py-4oDXhT/h5py-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -pthread -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/include/liblzf -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lhdf5 -lmpi -llzf -fPIC -shared lzf_filter.c -o liblzf_filter.so PYTHONPATH=/build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build mpirun -n 1 /usr/bin/make -C docs html make[2]: Entering directory '/build/h5py-4oDXhT/h5py-3.3.0/docs' sphinx-build -b html -d _build/doctrees -W . _build/html Running Sphinx v4.2.0 making output directory... done building [mo]: targets for 0 po files that are out of date building [html]: targets for 37 source files that are out of date updating environment: [new config] 37 added, 0 changed, 0 removed reading sources... [ 2%] build reading sources... [ 5%] config reading sources... [ 8%] contributing reading sources... [ 10%] faq reading sources... [ 13%] high/attr reading sources... [ 16%] high/dataset reading sources... [ 18%] high/dims reading sources... [ 21%] high/file reading sources... [ 24%] high/group reading sources... [ 27%] high/lowlevel reading sources... [ 29%] index reading sources... [ 32%] licenses reading sources... [ 35%] mpi reading sources... [ 37%] quick reading sources... [ 40%] refs reading sources... [ 43%] release_guide reading sources... [ 45%] special reading sources... [ 48%] strings reading sources... [ 51%] swmr reading sources... [ 54%] vds reading sources... [ 56%] whatsnew/2.0 reading sources... [ 59%] whatsnew/2.1 reading sources... [ 62%] whatsnew/2.10 reading sources... [ 64%] whatsnew/2.2 reading sources... [ 67%] whatsnew/2.3 reading sources... [ 70%] whatsnew/2.4 reading sources... [ 72%] whatsnew/2.5 reading sources... [ 75%] whatsnew/2.6 reading sources... [ 78%] whatsnew/2.7 reading sources... [ 81%] whatsnew/2.7.1 reading sources... [ 83%] whatsnew/2.8 reading sources... [ 86%] whatsnew/2.9 reading sources... [ 89%] whatsnew/3.0 reading sources... [ 91%] whatsnew/3.1 reading sources... [ 94%] whatsnew/3.2 reading sources... [ 97%] whatsnew/3.3 reading sources... [100%] whatsnew/index looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 2%] build writing output... [ 5%] config writing output... [ 8%] contributing writing output... [ 10%] faq writing output... [ 13%] high/attr writing output... [ 16%] high/dataset writing output... [ 18%] high/dims writing output... [ 21%] high/file writing output... [ 24%] high/group writing output... [ 27%] high/lowlevel writing output... [ 29%] index writing output... [ 32%] licenses writing output... [ 35%] mpi writing output... [ 37%] quick writing output... [ 40%] refs writing output... [ 43%] release_guide writing output... [ 45%] special writing output... [ 48%] strings writing output... [ 51%] swmr writing output... [ 54%] vds writing output... [ 56%] whatsnew/2.0 writing output... [ 59%] whatsnew/2.1 writing output... [ 62%] whatsnew/2.10 writing output... [ 64%] whatsnew/2.2 writing output... [ 67%] whatsnew/2.3 writing output... [ 70%] whatsnew/2.4 writing output... [ 72%] whatsnew/2.5 writing output... [ 75%] whatsnew/2.6 writing output... [ 78%] whatsnew/2.7 writing output... [ 81%] whatsnew/2.7.1 writing output... [ 83%] whatsnew/2.8 writing output... [ 86%] whatsnew/2.9 writing output... [ 89%] whatsnew/3.0 writing output... [ 91%] whatsnew/3.1 writing output... [ 94%] whatsnew/3.2 writing output... [ 97%] whatsnew/3.3 writing output... [100%] whatsnew/index generating indices... genindex done writing additional pages... search done copying static files... done copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done build succeeded. The HTML pages are in _build/html. Build finished. The HTML pages are in _build/html. make[2]: Leaving directory '/build/h5py-4oDXhT/h5py-3.3.0/docs' PYTHONPATH=/build/h5py-4oDXhT/h5py-3.3.0/.pybuild/cpython3_3.9_h5py_mpi/build mpirun -n 1 /usr/bin/make -C docs_api html make[2]: Entering directory '/build/h5py-4oDXhT/h5py-3.3.0/docs_api' sphinx-build -b html -d _build/doctrees . _build/html Running Sphinx v4.2.0 making output directory... done building [mo]: targets for 0 po files that are out of date building [html]: targets for 19 source files that are out of date updating environment: [new config] 19 added, 0 changed, 0 removed reading sources... [ 5%] h5 reading sources... [ 10%] h5a reading sources... [ 15%] h5ac reading sources... [ 21%] h5d reading sources... [ 26%] h5ds reading sources... [ 31%] h5f reading sources... [ 36%] h5fd reading sources... [ 42%] h5g reading sources... [ 47%] h5i reading sources... [ 52%] h5l reading sources... [ 57%] h5o reading sources... [ 63%] h5p reading sources... [ 68%] h5pl reading sources... [ 73%] h5r reading sources... [ 78%] h5s reading sources... [ 84%] h5t reading sources... [ 89%] h5z reading sources... [ 94%] index reading sources... [100%] objects looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 5%] h5 writing output... [ 10%] h5a writing output... [ 15%] h5ac writing output... [ 21%] h5d writing output... [ 26%] h5ds writing output... [ 31%] h5f writing output... [ 36%] h5fd writing output... [ 42%] h5g writing output... [ 47%] h5i writing output... [ 52%] h5l writing output... [ 57%] h5o writing output... [ 63%] h5p writing output... [ 68%] h5pl writing output... [ 73%] h5r writing output... [ 78%] h5s writing output... [ 84%] h5t writing output... [ 89%] h5z writing output... [ 94%] index writing output... [100%] objects docstring of h5py._debian_h5py_mpi.h5f.get_obj_count:9: WARNING: undefined label: ref._debian_h5py_mpi.obj docstring of h5py._debian_h5py_mpi.h5f.get_obj_ids:9: WARNING: undefined label: ref._debian_h5py_mpi.obj generating indices... genindex py-modindex done writing additional pages... search done copying static files... done copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 2 warnings. The HTML pages are in _build/html. Build finished. The HTML pages are in _build/html. make[2]: Leaving directory '/build/h5py-4oDXhT/h5py-3.3.0/docs_api' make[1]: Leaving directory '/build/h5py-4oDXhT/h5py-3.3.0' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-indep dh binary-indep --with python3,sphinxdoc --buildsystem=pybuild dh_testroot -i -O--buildsystem=pybuild dh_prep -i -O--buildsystem=pybuild dh_install -i -O--buildsystem=pybuild debian/rules override_dh_installdocs-indep make[1]: Entering directory '/build/h5py-4oDXhT/h5py-3.3.0' dh_installdocs grep "https://cdnjs.cloudflare.com/ajax/libs/mathjax/.*/latest.js" debian/python-h5py-doc/usr/share/doc/python-h5py-doc/html/* -R --files-with-matches | xargs -r sed "s|https://cdnjs.cloudflare.com/ajax/libs/mathjax/.*/latest.js|file:///usr/share/javascript/mathjax/unpacked/latest.js|g" -i make[1]: Leaving directory '/build/h5py-4oDXhT/h5py-3.3.0' dh_sphinxdoc -i -O--buildsystem=pybuild dh_installchangelogs -i -O--buildsystem=pybuild dh_installexamples -i -O--buildsystem=pybuild dh_installexamples: warning: Cannot auto-detect main package for python-h5py-doc. If the default is wrong, please use --doc-main-package dh_python3 -i -O--buildsystem=pybuild dh_installsystemduser -i -O--buildsystem=pybuild dh_perl -i -O--buildsystem=pybuild dh_link -i -O--buildsystem=pybuild dh_strip_nondeterminism -i -O--buildsystem=pybuild dh_compress -i -O--buildsystem=pybuild dh_fixperms -i -O--buildsystem=pybuild dh_missing -i -O--buildsystem=pybuild dh_installdeb -i -O--buildsystem=pybuild dh_gencontrol -i -O--buildsystem=pybuild dh_md5sums -i -O--buildsystem=pybuild dh_builddeb -i -O--buildsystem=pybuild dpkg-deb: building package 'python3-h5py' in '../python3-h5py_3.3.0-3_all.deb'. dpkg-deb: building package 'python-h5py-doc' in '../python-h5py-doc_3.3.0-3_all.deb'. dpkg-genbuildinfo --build=all dpkg-genchanges --build=all >../h5py_3.3.0-3_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-source: info: using options from h5py-3.3.0/debian/source/options: --extend-diff-ignore=^[^/]+\.egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/h5py-4oDXhT /tmp/h5py-3.3.0-3wu1jhq0u I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.T3I1GxGGYe... I: success in 825.9339 seconds md5: python-h5py-doc_3.3.0-3_all.deb: OK md5: python3-h5py_3.3.0-3_all.deb: OK sha1: python-h5py-doc_3.3.0-3_all.deb: OK sha1: python3-h5py_3.3.0-3_all.deb: OK sha256: python-h5py-doc_3.3.0-3_all.deb: OK sha256: python3-h5py_3.3.0-3_all.deb: OK Checksums: OK