Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/g/golang-github-shenwei356-bio/golang-github-shenwei356-bio_0.0~git20201213.18e3e64-1_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/golang-github-shenwei356-bio-0.0~git20201213.18e3e64-10c7l08z6/golang-github-shenwei356-bio_0.0~git20201213.18e3e64-1_all.buildinfo Get source package info: golang-github-shenwei356-bio=0.0~git20201213.18e3e64-1 Source URL: http://snapshot.notset.fr/mr/package/golang-github-shenwei356-bio/0.0~git20201213.18e3e64-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-12 automake=1:1.16.3-1 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.48 bash=5.1-1 binutils=2.35.1-4 binutils-common=2.35.1-4 binutils-x86-64-linux-gnu=2.35.1-4 bsdextrautils=2.36.1-2 bsdutils=1:2.36.1-2 build-essential=12.8 bzip2=1.0.8-4 coreutils=8.32-4+b1 cpp=4:10.2.0-1 cpp-10=10.2.1-1 dash=0.5.11+git20200708+dd9ef66-5 debconf=1.5.74 debhelper=13.3 debianutils=4.11.2 dh-autoreconf=19 dh-golang=1.49 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13+20201015-2 file=1:5.39-3 findutils=4.7.0+git20201010-2 g++=4:10.2.0-1 g++-10=10.2.1-1 gcc=4:10.2.0-1 gcc-10=10.2.1-1 gcc-10-base=10.2.1-1 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 golang-1.15-go=1.15.6-1 golang-1.15-src=1.15.6-1 golang-any=2:1.15~1 golang-github-burntsushi-toml-dev=0.3.1-1 golang-github-cespare-xxhash-dev=2.1.1-1 golang-github-cpuguy83-go-md2man-v2-dev=2.0.0+ds-5 golang-github-creack-pty-dev=1.1.11-1 golang-github-cznic-mathutil-dev=0.0~git20181122.297441e-2 golang-github-cznic-sortutil-dev=0.0~git20150617.0.4c73428-2 golang-github-davecgh-go-spew-dev=1.1.1-2 golang-github-edsrzf-mmap-go-dev=0.0~git20170320.0.0bce6a6-5 golang-github-fsnotify-fsnotify-dev=1.4.9-2 golang-github-google-go-cmp-dev=0.5.4-1 golang-github-hashicorp-hcl-dev=1.0.0-1 golang-github-klauspost-compress-dev=1.11.3-1 golang-github-klauspost-cpuid-dev=1.3.1+ds-1 golang-github-klauspost-pgzip-dev=1.2.5-1 golang-github-kr-fs-dev=0.1.0-1 golang-github-kr-pretty-dev=0.2.1+git20200831.59b4212-1 golang-github-kr-text-dev=0.2.0-1 golang-github-magiconair-properties-dev=1.8.4-1 golang-github-mitchellh-go-homedir-dev=1.1.0-1 golang-github-mitchellh-mapstructure-dev=1.3.3-1 golang-github-pelletier-go-toml-dev=1.8.1-1 golang-github-pkg-errors-dev=0.9.1-1 golang-github-pkg-sftp-dev=1.10.1-1 golang-github-pmezard-go-difflib-dev=1.0.0-3 golang-github-remyoudompheng-bigfft-dev=0.0+git20190728.6a916e3-1 golang-github-russross-blackfriday-v2-dev=2.0.1-3 golang-github-shenwei356-bpool-dev=0.0~git20160710.f9e0ee4-2 golang-github-shenwei356-breader-dev=0.0~git20170924.21f0a70-2 golang-github-shenwei356-natsort-dev=0.0~git20190418.600d539-2 golang-github-shenwei356-util-dev=0.0~git20190523.f71ff37-2 golang-github-shenwei356-xopen-dev=0.0~git20181203.f4f16dd-2 golang-github-shurcool-sanitized-anchor-name-dev=1.0.0-1 golang-github-spf13-afero-dev=1.4.1-1 golang-github-spf13-cast-dev=1.3.1-1 golang-github-spf13-cobra-dev=1.1.1-1 golang-github-spf13-jwalterweatherman-dev=1.1.0+really1.1.0-1 golang-github-spf13-pflag-dev=1.0.5-2 golang-github-spf13-viper-dev=1.7.1-1 golang-github-stretchr-objx-dev=0.3.0-1 golang-github-stretchr-testify-dev=1.6.1-1 golang-github-subosito-gotenv-dev=1.2.0+git20190917.de67a66-2 golang-go=2:1.15~1 golang-golang-x-crypto-dev=1:0.0~git20201016.9e8e0b3-1 golang-golang-x-net-dev=1:0.0+git20201031.ff519b6+dfsg-1 golang-golang-x-sys-dev=0.0~git20201101.da20708-2 golang-golang-x-text-dev=0.3.4-1 golang-golang-x-xerrors-dev=0.0~git20191204.9bdfabe-1 golang-gopkg-check.v1-dev=0.0+git20200902.038fdea-1 golang-gopkg-ini.v1-dev=1.57.0-1 golang-gopkg-yaml.v2-dev=2.4.0-1 golang-gopkg-yaml.v3-dev=3.0.0~git20200121.a6ecf24-2 golang-src=2:1.15~1 grep=3.6-1 groff-base=1.22.4-5 gzip=1.10-2 hostname=3.23 init-system-helpers=1.59 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libasan6=10.2.1-1 libatomic1=10.2.1-1 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3.1 libaudit1=1:2.8.5-3.1+b1 libbinutils=2.35.1-4 libblkid1=2.36.1-2 libbz2-1.0=1.0.8-4 libc-bin=2.31-5 libc-dev-bin=2.31-5 libc6=2.31-5 libc6-dev=2.31-5 libcap-ng0=0.7.9-2.2+b1 libcc1-0=10.2.1-1 libcom-err2=1.45.6-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.1-4 libctf0=2.35.1-4 libdb5.3=5.3.28+dfsg1-0.6 libdebconfclient0=0.255 libdebhelper-perl=13.3 libdpkg-perl=1.20.5 libelf1=0.182-1 libffi7=3.3-5 libfile-stripnondeterminism-perl=1.9.0-1 libgcc-10-dev=10.2.1-1 libgcc-s1=10.2.1-1 libgcrypt20=1.8.7-2 libgdbm-compat4=1.18.1-5.1 libgdbm6=1.18.1-5.1 libglib2.0-0=2.66.3-2 libgmp10=2:6.2.1+dfsg-1 libgomp1=10.2.1-1 libgpg-error0=1.38-2 libgssapi-krb5-2=1.18.3-4 libicu67=67.1-5 libisl23=0.23-1 libitm1=10.2.1-1 libk5crypto3=1.18.3-4 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-4 libkrb5support0=1.18.3-4 liblsan0=10.2.1-1 liblz4-1=1.9.2-2 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.39-3 libmagic1=1:5.39-3 libmount1=2.36.1-2 libmpc3=1.2.0-1 libmpfr6=4.1.0-3 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpcre2-8-0=10.36-2 libpcre3=2:8.39-13 libperl5.32=5.32.0-5 libpipeline1=1.5.3-1 libquadmath0=10.2.1-1 libseccomp2=2.5.0-3+b1 libselinux1=3.1-2+b2 libsigsegv2=2.12-2 libsmartcols1=2.36.1-2 libssl1.1=1.1.1i-1 libstdc++-10-dev=10.2.1-1 libstdc++6=10.2.1-1 libsub-override-perl=0.09-2 libsystemd0=247.1-4 libtinfo6=6.2+20201114-1 libtirpc-common=1.2.6-3 libtirpc-dev=1.2.6-3 libtirpc3=1.2.6-3 libtool=2.4.6-14 libtsan0=10.2.1-1 libubsan1=10.2.1-1 libuchardet0=0.0.7-1 libudev1=247.1-4 libunistring2=0.9.10-4 libuuid1=2.36.1-2 libxml2=2.9.10+dfsg-6.3+b1 libzstd1=1.4.5+dfsg-4 linux-libc-dev=5.9.11-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 ncurses-base=6.2+20201114-1 ncurses-bin=6.2+20201114-1 patch=2.7.6-6 perl=5.32.0-5 perl-base=5.32.0-5 perl-modules-5.32=5.32.0-5 po-debconf=1.0.21 sed=4.7-1 sensible-utils=0.0.12+nmu1 sysvinit-utils=2.96-5 tar=1.32+dfsg-1 util-linux=2.36.1-2 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201214T150912Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d golang-github-shenwei356-bio=0.0~git20201213.18e3e64-1 && mkdir -p /build/golang-github-shenwei356-bio-L6c2h1 && dpkg-source --no-check -x /*.dsc /build/golang-github-shenwei356-bio-L6c2h1/golang-github-shenwei356-bio-0.0-git20201213.18e3e64 && chown -R builduser:builduser /build/golang-github-shenwei356-bio-L6c2h1" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/golang-github-shenwei356-bio-L6c2h1/golang-github-shenwei356-bio-0.0-git20201213.18e3e64 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1607978714" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/golang-github-shenwei356-bio-L6c2h1 /tmp/golang-github-shenwei356-bio-0.0~git20201213.18e3e64-10c7l08z6 bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20201214T150912Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.gHSiGDVcB6 as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.gHSiGDVcB6 Reading package lists... Building dependency tree... util-linux is already the newest version (2.36.1-2). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20201214T150912Z unstable/main amd64 libfakeroot amd64 1.25.3-1.1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20201214T150912Z unstable/main amd64 fakeroot amd64 1.25.3-1.1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (1083 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4616 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1.1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1.1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1.1_amd64.deb ... Unpacking fakeroot (1.25.3-1.1) ... Setting up libfakeroot:amd64 (1.25.3-1.1) ... Setting up fakeroot (1.25.3-1.1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-5) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201214T150912Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.gHSiGDVcB6 Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20201214T150912Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 20s (1157 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.gHSiGDVcB6 I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d golang-github-shenwei356-bio=0.0~git20201213.18e3e64-1 && mkdir -p /build/golang-github-shenwei356-bio-L6c2h1 && dpkg-source --no-check -x /*.dsc /build/golang-github-shenwei356-bio-L6c2h1/golang-github-shenwei356-bio-0.0-git20201213.18e3e64 && chown -R builduser:builduser /build/golang-github-shenwei356-bio-L6c2h1"' exec /tmp/mmdebstrap.gHSiGDVcB6 Reading package lists... NOTICE: 'golang-github-shenwei356-bio' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/go-team/packages/golang-github-shenwei356-bio.git Please use: git clone https://salsa.debian.org/go-team/packages/golang-github-shenwei356-bio.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 75.5 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main golang-github-shenwei356-bio 0.0~git20201213.18e3e64-1 (dsc) [2561 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main golang-github-shenwei356-bio 0.0~git20201213.18e3e64-1 (tar) [70.0 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main golang-github-shenwei356-bio 0.0~git20201213.18e3e64-1 (diff) [2956 B] Fetched 75.5 kB in 0s (1804 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'golang-github-shenwei356-bio_0.0~git20201213.18e3e64-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting golang-github-shenwei356-bio in /build/golang-github-shenwei356-bio-L6c2h1/golang-github-shenwei356-bio-0.0-git20201213.18e3e64 dpkg-source: info: unpacking golang-github-shenwei356-bio_0.0~git20201213.18e3e64.orig.tar.xz dpkg-source: info: unpacking golang-github-shenwei356-bio_0.0~git20201213.18e3e64-1.debian.tar.xz I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/golang-github-shenwei356-bio-L6c2h1/golang-github-shenwei356-bio-0.0-git20201213.18e3e64 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1607978714" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.gHSiGDVcB6 dpkg-buildpackage: info: source package golang-github-shenwei356-bio dpkg-buildpackage: info: source version 0.0~git20201213.18e3e64-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . debian/rules clean dh clean --builddirectory=_build --buildsystem=golang --with=golang dh_auto_clean -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf_clean -O--builddirectory=_build -O--buildsystem=golang dh_clean -O--builddirectory=_build -O--buildsystem=golang debian/rules binary-indep dh binary-indep --builddirectory=_build --buildsystem=golang --with=golang dh_update_autotools_config -i -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf -i -O--builddirectory=_build -O--buildsystem=golang dh_auto_configure -i -O--builddirectory=_build -O--buildsystem=golang dh_auto_build -i -O--builddirectory=_build -O--buildsystem=golang cd _build && go install -trimpath -v -p 4 github.com/shenwei356/bio/featio/gtf github.com/shenwei356/bio/seq github.com/shenwei356/bio/seqio/fai github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/util internal/unsafeheader runtime/internal/sys internal/cpu runtime/internal/atomic math/bits runtime/internal/math unicode/utf8 internal/race sync/atomic internal/bytealg unicode math internal/testlog container/list runtime crypto/internal/subtle crypto/subtle unicode/utf16 vendor/golang.org/x/crypto/cryptobyte/asn1 internal/nettrace runtime/cgo vendor/golang.org/x/crypto/internal/subtle internal/reflectlite sync internal/singleflight math/rand errors sort internal/oserror io strconv syscall vendor/golang.org/x/net/dns/dnsmessage bytes strings reflect hash hash/crc32 bufio crypto crypto/internal/randutil internal/syscall/unix time internal/syscall/execenv crypto/hmac crypto/rc4 vendor/golang.org/x/text/transform vendor/golang.org/x/crypto/hkdf path github.com/shenwei356/bpool regexp/syntax github.com/shenwei356/bio/util context internal/poll regexp internal/fmtsort encoding/binary os crypto/cipher crypto/sha512 crypto/ed25519/internal/edwards25519 crypto/aes fmt crypto/des crypto/md5 crypto/sha1 crypto/sha256 encoding/base64 encoding/pem path/filepath net vendor/golang.org/x/crypto/chacha20 math/big compress/flate github.com/klauspost/compress/flate compress/gzip encoding/hex io/ioutil github.com/klauspost/pgzip net/url github.com/cznic/sortutil crypto/rand crypto/elliptic encoding/asn1 crypto/ed25519 crypto/rsa crypto/dsa vendor/golang.org/x/crypto/poly1305 vendor/golang.org/x/sys/cpu vendor/golang.org/x/crypto/cryptobyte crypto/x509/pkix vendor/golang.org/x/crypto/chacha20poly1305 vendor/golang.org/x/crypto/curve25519 crypto/ecdsa log vendor/golang.org/x/net/http2/hpack vendor/golang.org/x/text/unicode/norm vendor/golang.org/x/text/unicode/bidi mime vendor/golang.org/x/text/secure/bidirule mime/quotedprintable net/http/internal os/exec os/user vendor/golang.org/x/net/idna github.com/shenwei356/util/byteutil github.com/shenwei356/bio/seq github.com/edsrzf/mmap-go github.com/shenwei356/bio/seqio/fai vendor/golang.org/x/net/http/httpproxy net/textproto crypto/x509 vendor/golang.org/x/net/http/httpguts mime/multipart crypto/tls net/http/httptrace net/http github.com/shenwei356/xopen github.com/shenwei356/breader github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/featio/gtf debian/rules override_dh_auto_test make[1]: Entering directory '/build/golang-github-shenwei356-bio-L6c2h1/golang-github-shenwei356-bio-0.0-git20201213.18e3e64' cp seqio/fastx/test*.f* seqio/fastx/*.fx _build/src/github.com/shenwei356/bio/seqio/fastx cp seqio/fai/seq.fa* _build/src/github.com/shenwei356/bio/seqio/fai cp featio/gtf/test*.gtf _build/src/github.com/shenwei356/bio/featio/gtf dh_auto_test cd _build && go test -vet=off -v -p 4 github.com/shenwei356/bio/featio/gtf github.com/shenwei356/bio/seq github.com/shenwei356/bio/seqio/fai github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/util === RUN TestGTF {140 Twinscan inter 5141 8522 0xc00007ee00 []} {140 Twinscan inter_CNS 8523 9711 0xc00007ee30 []} {140 Twinscan inter 9712 13182 0xc00007ee50 []} {140 Twinscan 3UTR 65149 65487 0xc00007ee70 []} {140 Twinscan 3UTR 66823 66992 0xc00007ee90 []} {140 Twinscan stop_codon 66993 66995 0xc00007eeb0 0xc0000185e0 []} {140 Twinscan CDS 66996 66999 0xc00007eed0 0xc0000185e8 []} {140 Twinscan intron_CNS 70103 70151 0xc00007eef0 []} {140 Twinscan CDS 70207 70294 0xc00007ef10 0xc0000185f0 []} {140 Twinscan CDS 71696 71807 0xc00007ef30 0xc0000185f8 []} {140 Twinscan start_codon 71805 71806 0xc00007ef50 0xc000018600 []} {140 Twinscan start_codon 73222 73222 0xc00007ef70 0xc000018608 []} {140 Twinscan CDS 73222 73222 0xc00007ef90 0xc000018610 []} {140 Twinscan 5UTR 73223 73504 0xc00007efb0 []} --- PASS: TestGTF (0.00s) === RUN TestGTF2 {381 Twinscan exon 150 200 0xc00007f010 []} {381 Twinscan exon 300 401 0xc00007f040 []} {381 Twinscan CDS 380 401 0xc00007f060 0xc000018680 []} {381 Twinscan exon 501 650 0xc00007f080 []} {381 Twinscan CDS 501 650 0xc00007f0a0 0xc000018688 []} {381 Twinscan exon 700 800 0xc00007f0c0 []} {381 Twinscan CDS 700 707 0xc00007f0e0 0xc000018690 []} {381 Twinscan exon 900 1000 0xc00007f100 []} {381 Twinscan start_codon 380 382 0xc00007f120 0xc000018698 []} {381 Twinscan stop_codon 708 710 0xc00007f140 0xc0000186a0 []} --- PASS: TestGTF2 (0.00s) === RUN TestGTF3 {NC_002516.2 genbank gene 6261828 6263564 0xc000120010 0xc000118020 []} {NC_002516.2 genbank CDS 6261828 6263564 0xc000120040 0xc000118028 []} {NC_002516.2 genbank gene 6263805 6264212 0xc000120060 0xc000118030 []} {NC_002516.2 genbank CDS 6263805 6264212 0xc000120080 0xc000118038 []} {NC_002516.2 genbank gene 6264227 6264361 0xc0001200a0 0xc000118040 []} {NC_002516.2 genbank CDS 6264227 6264361 0xc0001200c0 0xc000118048 []} --- PASS: TestGTF3 (0.00s) PASS ok github.com/shenwei356/bio/featio/gtf 0.006s === RUN Test --- PASS: Test (0.00s) === RUN TestBases2AmbBase --- PASS: TestBases2AmbBase (0.00s) === RUN TestAmbBase2Bases --- PASS: TestAmbBase2Bases (0.00s) === RUN TestCodonTableStranslation --- PASS: TestCodonTableStranslation (0.00s) === RUN TestPhredAndSolexa --- PASS: TestPhredAndSolexa (0.00s) === RUN TestValidateSequence --- PASS: TestValidateSequence (0.00s) === RUN TestRevCom --- PASS: TestRevCom (0.00s) === RUN TestBaseContent --- PASS: TestBaseContent (0.00s) === RUN TestSubSeq --- PASS: TestSubSeq (0.00s) === RUN TestSubSeqInplace --- PASS: TestSubSeqInplace (0.00s) PASS ok github.com/shenwei356/bio/seq 0.196s === RUN TestFastaReader --- PASS: TestFastaReader (0.00s) === RUN TestFastaReaderNotMapWholeFile --- PASS: TestFastaReaderNotMapWholeFile (0.00s) PASS ok github.com/shenwei356/bio/seqio/fai 0.003s === RUN TestFastaReader2 --- PASS: TestFastaReader2 (0.00s) === RUN TestFastaReader3 --- PASS: TestFastaReader3 (0.00s) === RUN TestFastqReadern --- PASS: TestFastqReadern (0.00s) === RUN TestFastaReader --- PASS: TestFastaReader (0.00s) === RUN TestFastqReader --- PASS: TestFastqReader (0.00s) === RUN TestFastqReader2 --- PASS: TestFastqReader2 (0.00s) === RUN TestFastqReader3 --- PASS: TestFastqReader3 (0.00s) === RUN TestBlankFile --- PASS: TestBlankFile (0.00s) === RUN TestBlankFile2 --- PASS: TestBlankFile2 (0.00s) === RUN TestEmptyFile --- PASS: TestEmptyFile (0.00s) PASS ok github.com/shenwei356/bio/seqio/fastx 0.101s === RUN Test --- PASS: Test (0.00s) PASS ok github.com/shenwei356/bio/util 0.004s make[1]: Leaving directory '/build/golang-github-shenwei356-bio-L6c2h1/golang-github-shenwei356-bio-0.0-git20201213.18e3e64' create-stamp debian/debhelper-build-stamp dh_testroot -i -O--builddirectory=_build -O--buildsystem=golang dh_prep -i -O--builddirectory=_build -O--buildsystem=golang dh_auto_install -i -O--builddirectory=_build -O--buildsystem=golang debian/rules override_dh_install make[1]: Entering directory '/build/golang-github-shenwei356-bio-L6c2h1/golang-github-shenwei356-bio-0.0-git20201213.18e3e64' dh_install find debian \( -name "*.go" -o -name "*.fa" \) -exec chmod -x \{\} \; make[1]: Leaving directory '/build/golang-github-shenwei356-bio-L6c2h1/golang-github-shenwei356-bio-0.0-git20201213.18e3e64' dh_installdocs -i -O--builddirectory=_build -O--buildsystem=golang dh_installchangelogs -i -O--builddirectory=_build -O--buildsystem=golang dh_installsystemduser -i -O--builddirectory=_build -O--buildsystem=golang dh_perl -i -O--builddirectory=_build -O--buildsystem=golang dh_link -i -O--builddirectory=_build -O--buildsystem=golang dh_strip_nondeterminism -i -O--builddirectory=_build -O--buildsystem=golang dh_compress -i -O--builddirectory=_build -O--buildsystem=golang dh_fixperms -i -O--builddirectory=_build -O--buildsystem=golang dh_missing -i -O--builddirectory=_build -O--buildsystem=golang dh_installdeb -i -O--builddirectory=_build -O--buildsystem=golang dh_golang -i -O--builddirectory=_build -O--buildsystem=golang Use of uninitialized value $caller in string eq at /usr/share/perl5/Debian/Debhelper/Buildsystem/golang.pm line 567. dh_gencontrol -i -O--builddirectory=_build -O--buildsystem=golang dh_md5sums -i -O--builddirectory=_build -O--buildsystem=golang dh_builddeb -i -O--builddirectory=_build -O--buildsystem=golang dpkg-deb: building package 'golang-github-shenwei356-bio-dev' in '../golang-github-shenwei356-bio-dev_0.0~git20201213.18e3e64-1_all.deb'. dpkg-genbuildinfo --build=all dpkg-genchanges --build=all >../golang-github-shenwei356-bio_0.0~git20201213.18e3e64-1_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/golang-github-shenwei356-bio-L6c2h1 /tmp/golang-github-shenwei356-bio-0.0~git20201213.18e3e64-10c7l08z6 I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.gHSiGDVcB6... I: success in 530.0121 seconds md5: golang-github-shenwei356-bio-dev_0.0~git20201213.18e3e64-1_all.deb: OK sha1: golang-github-shenwei356-bio-dev_0.0~git20201213.18e3e64-1_all.deb: OK sha256: golang-github-shenwei356-bio-dev_0.0~git20201213.18e3e64-1_all.deb: OK Checksums: OK