Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/g/gkl/gkl_0.8.7+dfsg-1_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/gkl-0.8.7+dfsg-1eq8gop0l/gkl_0.8.7+dfsg-1_all.buildinfo Get source package info: gkl=0.8.7+dfsg-1 Source URL: http://snapshot.notset.fr/mr/package/gkl/0.8.7+dfsg-1/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=adduser=3.118 ant=1.10.9-1 ant-optional=1.10.9-1 antlr=2.7.7+dfsg-10 autoconf=2.69-14 automake=1:1.16.3-2 autopoint=0.21-3 autotools-dev=20180224.1+nmu1 base-files=11 base-passwd=3.5.48 bash=5.1-2 binutils=2.35.1-6 binutils-common=2.35.1-6 binutils-x86-64-linux-gnu=2.35.1-6 bnd=5.0.1-2 bsdextrautils=2.36.1-4 bsdutils=1:2.36.1-4 build-essential=12.9 bzip2=1.0.8-4 ca-certificates=20200601 ca-certificates-java=20190909 cmake=3.18.4-1+b1 cmake-data=3.18.4-1 coreutils=8.32-4+b1 cpp=4:10.2.0-1 cpp-10=10.2.1-3 dash=0.5.11+git20200708+dd9ef66-5 dctrl-tools=2.24-3+b1 debconf=1.5.74 debhelper=13.3.1 debianutils=4.11.2 default-jdk=2:1.11-72 default-jdk-doc=2:1.11-72 default-jdk-headless=2:1.11-72 default-jre=2:1.11-72 default-jre-headless=2:1.11-72 devscripts=2.20.5 dh-autoreconf=19 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-5 dirmngr=2.2.20-1 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13+20201015-2 fakeroot=1.25.3-1.1 file=1:5.39-3 findutils=4.7.0+git20201010-2 fontconfig-config=2.13.1-4.2 fonts-dejavu-core=2.37-2 g++=4:10.2.0-1 g++-10=10.2.1-3 gcc=4:10.2.0-1 gcc-10=10.2.1-3 gcc-10-base=10.2.1-3 gettext=0.21-3 gettext-base=0.21-3 gnupg=2.2.20-1 gnupg-l10n=2.2.20-1 gnupg-utils=2.2.20-1 gpg=2.2.20-1 gpg-agent=2.2.20-1 gpg-wks-client=2.2.20-1 gpg-wks-server=2.2.20-1 gpgconf=2.2.20-1 gpgsm=2.2.20-1 gpgv=2.2.20-1 gradle=4.4.1-12 gradle-debian-helper=2.1 grep=3.6-1 groff-base=1.22.4-5 groovy=2.4.21-1 gzip=1.10-2 hostname=3.23 init-system-helpers=1.60 intltool-debian=0.35.0+20060710.5 ivy=2.4.0-5 java-common=0.72 java-wrappers=0.3 javahelper=0.77 junit4=4.13.1-1 libacl1=2.2.53-9 libactivation-java=1.2.0-2 libantlr-java=2.7.7+dfsg-10 libaopalliance-java=20070526-6 libapache-pom-java=18-1 libarchive-zip-perl=1.68-1 libarchive13=3.4.3-2 libargs4j-java=2.33-1.1 libasan6=10.2.1-3 libasm-java=9.0-1 libasound2=1.2.4-1.1 libasound2-data=1.2.4-1.1 libassuan0=2.5.3-7.1 libatinject-jsr330-api-java=1.0+ds1-5 libatomic1=10.2.1-3 libattr1=1:2.4.48-6 libaudit-common=1:3.0-1 libaudit1=1:3.0-1 libavahi-client3=0.8-3 libavahi-common-data=0.8-3 libavahi-common3=0.8-3 libb-hooks-op-check-perl=0.22-1+b3 libbcel-java=6.5.0-1 libbcpg-java=1.65-2 libbcprov-java=1.65-2 libbinutils=2.35.1-6 libblkid1=2.36.1-4 libbrotli1=1.0.9-2+b2 libbsd0=0.10.0-1 libbsf-java=1:2.4.0-8 libbsh-java=2.0b4-20 libbz2-1.0=1.0.8-4 libc-bin=2.31-7 libc-dev-bin=2.31-7 libc6=2.31-7 libc6-dev=2.31-7 libcap-ng0=0.7.9-2.2+b1 libcc1-0=10.2.1-3 libcdi-api-java=1.2-2 libclass-method-modifiers-perl=2.13-1 libcodemodel-java=2.6+jaxb2.3.0.1-9 libcom-err2=1.45.6-1 libcommons-cli-java=1.4-2 libcommons-codec-java=1.14-1 libcommons-collections3-java=3.2.2-2 libcommons-compress-java=1.20-1 libcommons-io-java=2.8.0-1 libcommons-jexl2-java=2.1.1-4 libcommons-lang-java=2.6-9 libcommons-lang3-java=3.11-1 libcommons-logging-java=1.2-2 libcommons-parent-java=43-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.1-6 libctf0=2.35.1-6 libcups2=2.3.3op1-4 libcurl4=7.74.0-1 libdb5.3=5.3.28+dfsg1-0.6 libdbus-1-3=1.12.20-1 libdd-plist-java=1.20-1.1 libdebconfclient0=0.256 libdebhelper-perl=13.3.1 libdevel-callchecker-perl=0.008-1+b2 libdom4j-java=2.1.3-1 libdpkg-perl=1.20.5 libdrm-amdgpu1=2.4.103-2 libdrm-common=2.4.103-2 libdrm-intel1=2.4.103-2 libdrm-nouveau2=2.4.103-2 libdrm-radeon1=2.4.103-2 libdrm2=2.4.103-2 libdtd-parser-java=1.2~svn20110404-1.1 libdynaloader-functions-perl=0.003-1.1 libedit2=3.1-20191231-2+b1 libel-api-java=3.0.0-3 libelf1=0.182-2 libencode-locale-perl=1.05-1.1 libexpat1=2.2.10-1 libfakeroot=1.25.3-1.1 libfastinfoset-java=1.2.12-3 libfelix-framework-java=4.6.1-2.1 libfelix-gogo-runtime-java=0.16.2-1.1 libfelix-resolver-java=1.16.0-1 libffi7=3.3-5 libfile-dirlist-perl=0.05-2 libfile-homedir-perl=1.006-1 libfile-listing-perl=6.14-1 libfile-stripnondeterminism-perl=1.9.0-1 libfile-touch-perl=0.11-1 libfile-which-perl=1.23-1 libfindbugs-java=3.1.0~preview2-3 libfontconfig1=2.13.1-4.2 libfreetype6=2.10.4+dfsg-1 libgatk-native-bindings-java=1.0.0-2.1 libgcc-10-dev=10.2.1-3 libgcc-s1=10.2.1-3 libgcrypt20=1.8.7-2 libgdbm-compat4=1.18.1-5.1 libgdbm6=1.18.1-5.1 libgeronimo-annotation-1.3-spec-java=1.0-1.1 libgeronimo-interceptor-3.0-spec-java=1.0.1-4 libgif7=5.1.9-1 libgl1=1.3.2-1 libgl1-mesa-dri=20.3.2-1 libglapi-mesa=20.3.2-1 libglib2.0-0=2.66.4-1 libglvnd0=1.3.2-1 libglx-mesa0=20.3.2-1 libglx0=1.3.2-1 libgmp10=2:6.2.1+dfsg-1 libgnutls30=3.7.0-5 libgomp1=10.2.1-3 libgoogle-gson-java=2.8.6-1 libgpg-error0=1.38-2 libgradle-core-java=4.4.1-12 libgradle-plugins-java=4.4.1-12 libgraphite2-3=1.3.14-1 libgssapi-krb5-2=1.18.3-4 libguava-java=29.0-6 libguice-java=4.2.3-1 libhamcrest-java=1.3-9 libharfbuzz0b=2.6.7-1 libhawtjni-runtime-java=1.17-1 libhogweed6=3.6-2 libhtml-parser-perl=3.75-1+b1 libhtml-tagset-perl=3.20-4 libhtml-tree-perl=5.07-2 libhtsjdk-java=2.23.0+dfsg-2 libhttp-cookies-perl=6.09-1 libhttp-date-perl=6.05-1 libhttp-message-perl=6.26-1 libhttp-negotiate-perl=6.01-1 libhttpclient-java=4.5.13-1 libhttpcore-java=4.4.13-1 libicu67=67.1-5 libidn2-0=2.3.0-4 libimport-into-perl=1.002005-1 libio-html-perl=1.001-1.1 libio-pty-perl=1:1.15-2 libio-socket-ssl-perl=2.068-1 libipc-run-perl=20200505.0-1 libisl23=0.23-1 libistack-commons-java=3.0.6-4 libitm1=10.2.1-3 libjansi-java=1.18-1 libjansi-native-java=1.8-1 libjarjar-java=1.4+svn142-10 libjatl-java=0.2.3-1.1 libjavaewah-java=0.7.9-1 libjaxb-api-java=2.3.1-1 libjaxb-java=2.3.0.1-9 libjaxen-java=1.1.6-4 libjcifs-java=1.3.19-2 libjcip-annotations-java=20060626-5.1 libjcommander-java=1.71-3 libjformatstring-java=0.10~20131207-2.1 libjgit-java=3.7.1-6 libjline2-java=2.14.6-4 libjna-java=5.5.0-1.1 libjna-jni=5.5.0-1.1 libjpeg62-turbo=1:2.0.5-2 libjs-jquery=3.5.1+dfsg+~3.5.5-5 libjsch-java=0.1.55-1 libjsoncpp24=1.9.4-4 libjsoup-java=1.10.2-2 libjsp-api-java=2.3.4-3 libjsr305-java=0.1~+svn49-11 libjzlib-java=1.1.3-2 libk5crypto3=1.18.3-4 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-4 libkrb5support0=1.18.3-4 libkryo-java=2.20-6.2 libksba8=1.5.0-3 liblcms2-2=2.9-4+b1 libldap-2.4-2=2.4.56+dfsg-1 liblightcouch-java=0.0.6-1.1 libllvm11=1:11.0.1~+rc2-1 liblog4j2-java=2.11.2-1 liblogback-java=1:1.2.3-5 liblsan0=10.2.1-3 liblwp-mediatypes-perl=6.04-1 liblwp-protocol-https-perl=6.10-1 liblz4-1=1.9.3-1 liblzma5=5.2.5-1.0 libmagic-mgc=1:5.39-3 libmagic1=1:5.39-3 libmaven-file-management-java=3.0.0-1 libmaven-parent-java=31-2 libmaven-resolver-java=1.4.2-1 libmaven-shared-io-java=3.0.0-3 libmaven-shared-utils-java=3.3.0-1 libmaven3-core-java=3.6.3-1 libminlog-java=1.3.0-1.1 libmodule-runtime-perl=0.016-1 libmongodb-java=3.6.3-2 libmoo-perl=2.004004-1 libmount1=2.36.1-4 libmpc3=1.2.0-1 libmpfr6=4.1.0-3 libnative-platform-java=0.14-5 libnative-platform-jni=0.14-5 libncurses6=6.2+20201114-2 libncursesw6=6.2+20201114-2 libnekohtml-java=1.9.22-1.1 libnet-http-perl=6.19-1 libnet-ssleay-perl=1.88-3+b1 libnettle8=3.6-2 libnghttp2-14=1.42.0-1 libngs-java=2.10.5-1 libngs-sdk-dev=2.10.5-1 libngs-sdk2=2.10.5-1 libnpth0=1.6-3 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libnspr4=2:4.29-1 libnss3=2:3.60-1 libobjenesis-java=3.1-1 libosgi-annotation-java=7.0.0-2 libosgi-compendium-java=7.0.0-1 libosgi-core-java=7.0.0-2 libp11-kit0=0.23.22-1 libpam-modules=1.4.0-2 libpam-modules-bin=1.4.0-2 libpam-runtime=1.4.0-2 libpam0g=1.4.0-2 libparams-classify-perl=0.015-1+b3 libpciaccess0=0.16-1 libpcre2-8-0=10.36-2 libpcre3=2:8.39-13 libpcsclite1=1.9.0-1 libperl5.32=5.32.0-6 libpipeline1=1.5.3-1 libplexus-archiver-java=3.6.0-2 libplexus-cipher-java=1.7-3 libplexus-classworlds-java=2.6.0-1 libplexus-component-annotations-java=2.1.0-1 libplexus-container-default-java=2.1.0-1 libplexus-container-default1.5-java=2.1.0-1 libplexus-interpolation-java=1.26-1 libplexus-io-java=3.2.0-1 libplexus-sec-dispatcher-java=1.4-4 libplexus-utils2-java=3.3.0-1 libpng16-16=1.6.37-3 libpolyglot-maven-java=0.8~tobrien+git20120905-10 libprocps8=2:3.3.16-5 libpsl5=0.21.0-1.1 libpython3-stdlib=3.9.1-1 libpython3.9-minimal=3.9.1-1 libpython3.9-stdlib=3.9.1-1 libqdox-java=1.12.1-3 libquadmath0=10.2.1-3 libreadline8=8.1-1 libreflectasm-java=1.05-4.1 librelaxng-datatype-java=1.0+ds1-3.1 librhash0=1.4.0-1 librhino-java=1.7.7.2-1 librngom-java=2.3.0.1-9 librole-tiny-perl=2.001004-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.27+dfsg-2 libsasl2-modules-db=2.1.27+dfsg-2 libseccomp2=2.5.1-1 libselinux1=3.1-2+b2 libsemanage-common=3.1-1 libsemanage1=3.1-1+b2 libsensors-config=1:3.6.0-2 libsensors5=1:3.6.0-2 libsepol1=3.1-1 libservlet-api-java=4.0.1-2 libservlet3.1-java=1:4.0.1-2 libsigsegv2=2.12-3 libsimple-http-java=4.1.21-1.1 libsisu-guice-java=4.2.0-1 libsisu-inject-java=0.3.3-1 libsisu-ioc-java=2.3.0-11 libsisu-plexus-java=0.3.3-3 libslf4j-java=1.7.25-3 libsmartcols1=2.36.1-4 libsnappy-java=1.1.7.7-1 libsnappy-jni=1.1.7.7-1 libsnappy1v5=1.1.8-1 libsqlite3-0=3.34.0-1 libssh2-1=1.9.0-2 libssl1.1=1.1.1i-1 libstax-ex-java=1.7.8-3 libstdc++-10-dev=10.2.1-3 libstdc++6=10.2.1-3 libstreambuffer-java=1.5.4-1.1 libstrictures-perl=2.000006-1 libsub-override-perl=0.09-2 libsub-quote-perl=2.006006-1 libsystemd0=247.2-4 libtasn1-6=4.16.0-2 libtimedate-perl=2.3300-1 libtinfo6=6.2+20201114-2 libtirpc-common=1.3.1-1 libtirpc-dev=1.3.1-1 libtirpc3=1.3.1-1 libtool=2.4.6-14 libtry-tiny-perl=0.30-1 libtsan0=10.2.1-3 libtxw2-java=2.3.0.1-9 libubsan1=10.2.1-3 libuchardet0=0.0.7-1 libudev1=247.2-4 libunistring2=0.9.10-4 liburi-perl=5.05-1 libuuid1=2.36.1-4 libuv1=1.40.0-1 libvulkan1=1.2.154.1-1 libwagon-file-java=3.3.4-1 libwagon-http-java=3.3.4-1 libwagon-provider-api-java=3.3.4-1 libwebsocket-api-java=1.1-2 libwww-perl=6.51-1 libwww-robotrules-perl=6.02-1 libx11-6=2:1.6.12-1 libx11-data=2:1.6.12-1 libx11-xcb1=2:1.6.12-1 libxau6=1:1.0.8-1+b2 libxbean-reflect-java=4.5-8 libxcb-dri2-0=1.14-2.1 libxcb-dri3-0=1.14-2.1 libxcb-glx0=1.14-2.1 libxcb-present0=1.14-2.1 libxcb-shm0=1.14-2.1 libxcb-sync1=1.14-2.1 libxcb-xfixes0=1.14-2.1 libxcb1=1.14-2.1 libxdamage1=1:1.1.5-2 libxdmcp6=1:1.1.2-3 libxerces2-java=2.12.1-1 libxext6=2:1.3.3-1.1 libxfixes3=1:5.0.3-2 libxi6=2:1.7.10-1 libxml-commons-external-java=1.4.01-5 libxml-commons-resolver1.1-java=1.2-11 libxml2=2.9.10+dfsg-6.3+b1 libxpp3-java=1.1.4c-3 libxrender1=1:0.9.10-1 libxshmfence1=1.3-1 libxsom-java=2.3.0.1-9 libxstream-java=1.4.15-1 libxtst6=2:1.2.3-1 libxxf86vm1=1:1.1.4-1+b2 libxz-java=1.8-2 libyaml-snake-java=1.27+ds-1 libz3-4=4.8.9-1 libzstd1=1.4.8+dfsg-1 linux-libc-dev=5.10.4-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 mailcap=3.68 make=4.3-4 man-db=2.9.3-2 maven-repo-helper=1.9.4 mawk=1.3.4.20200120-2 media-types=1.1.0 mime-support=3.66 ncurses-base=6.2+20201114-2 ncurses-bin=6.2+20201114-2 netbase=6.2 openjdk-11-doc=11.0.10+8-1 openjdk-11-jdk=11.0.10+8-1 openjdk-11-jdk-headless=11.0.10+8-1 openjdk-11-jre=11.0.10+8-1 openjdk-11-jre-headless=11.0.10+8-1 openssl=1.1.1i-1 passwd=1:4.8.1-1 patch=2.7.6-6 patchutils=0.4.2-1 perl=5.32.0-6 perl-base=5.32.0-6 perl-modules-5.32=5.32.0-6 perl-openssl-defaults=5 pinentry-curses=1.1.0-4 po-debconf=1.0.21+nmu1 procps=2:3.3.16-5 python3=3.9.1-1 python3-minimal=3.9.1-1 python3.9=3.9.1-1 python3.9-minimal=3.9.1-1 readline-common=8.1-1 sed=4.7-1 sensible-utils=0.0.12+nmu1 sysvinit-utils=2.96-5 tar=1.32+dfsg-1 testng=6.9.12-4 tzdata=2020f-1 ucf=3.0043 unzip=6.0-25 util-linux=2.36.1-4 wdiff=1.2.2-2+b1 x11-common=1:7.7+21 xz-utils=5.2.5-1.0 yasm=1.3.0-2+b1 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210105T023154Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d gkl=0.8.7+dfsg-1 && mkdir -p /build/gkl-65r4X4 && dpkg-source --no-check -x /*.dsc /build/gkl-65r4X4/gkl-0.8.7+dfsg && chown -R builduser:builduser /build/gkl-65r4X4" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/gkl-65r4X4/gkl-0.8.7+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1609870329" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/gkl-65r4X4 /tmp/gkl-0.8.7+dfsg-1eq8gop0l bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20210105T023154Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.QN7IfhGhqY as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.QN7IfhGhqY Reading package lists... Building dependency tree... util-linux is already the newest version (2.36.1-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20210105T023154Z unstable/main amd64 libfakeroot amd64 1.25.3-1.1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20210105T023154Z unstable/main amd64 fakeroot amd64 1.25.3-1.1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (1101 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4647 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1.1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1.1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1.1_amd64.deb ... Unpacking fakeroot (1.25.3-1.1) ... Setting up libfakeroot:amd64 (1.25.3-1.1) ... Setting up fakeroot (1.25.3-1.1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210105T023154Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.QN7IfhGhqY Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20210105T023154Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 19s (1163 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.QN7IfhGhqY I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d gkl=0.8.7+dfsg-1 && mkdir -p /build/gkl-65r4X4 && dpkg-source --no-check -x /*.dsc /build/gkl-65r4X4/gkl-0.8.7+dfsg && chown -R builduser:builduser /build/gkl-65r4X4"' exec /tmp/mmdebstrap.QN7IfhGhqY Reading package lists... NOTICE: 'gkl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/java-team/gkl.git Please use: git clone https://salsa.debian.org/java-team/gkl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1198 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main gkl 0.8.7+dfsg-1 (dsc) [2170 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main gkl 0.8.7+dfsg-1 (tar) [1189 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main gkl 0.8.7+dfsg-1 (diff) [6364 B] Fetched 1198 kB in 1s (1151 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'gkl_0.8.7+dfsg-1.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting gkl in /build/gkl-65r4X4/gkl-0.8.7+dfsg dpkg-source: info: unpacking gkl_0.8.7+dfsg.orig.tar.xz dpkg-source: info: unpacking gkl_0.8.7+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_debian_build.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/gkl-65r4X4/gkl-0.8.7+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1609870329" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.QN7IfhGhqY dpkg-buildpackage: info: source package gkl dpkg-buildpackage: info: source version 0.8.7+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . debian/rules clean dh clean --buildsystem=gradle --with javahelper,jh_maven_repo_helper dh_auto_clean -O--buildsystem=gradle install -d /build/gkl-65r4X4/gkl-0.8.7\+dfsg/debian/.debhelper/generated/_source/home sh -c "find . -wholename .*build/tmp | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" sh -c "find . -wholename .*build/debian | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" rm -Rf /build/gkl-65r4X4/gkl-0.8.7\+dfsg/.gradle /build/gkl-65r4X4/gkl-0.8.7\+dfsg/buildSrc/.gradle .m2 dh_autoreconf_clean -O--buildsystem=gradle jh_clean -O--buildsystem=gradle rm -fr debian/_jh_manifest* debian/_jh_build* rm -fr debian/.eclipse-build rm -f debian/orbitdeps.debhelper mh_clean -O--buildsystem=gradle debian/rules override_dh_clean make[1]: Entering directory '/build/gkl-65r4X4/gkl-0.8.7+dfsg' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libgkl-java.substvars debian/libgkl-jni.substvars debian/files rm -fr -- debian/libgkl-java/ debian/tmp/ debian/libgkl-jni/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) # also remove bai files that are left after tests rm -f debian/bd-temp-substvars rm -f debian/bd.substvars make[1]: Leaving directory '/build/gkl-65r4X4/gkl-0.8.7+dfsg' debian/rules binary-indep dh binary-indep --buildsystem=gradle --with javahelper,jh_maven_repo_helper dh_update_autotools_config -i -O--buildsystem=gradle dh_autoreconf -i -O--buildsystem=gradle dh_auto_configure -i -O--buildsystem=gradle install -d /build/gkl-65r4X4/gkl-0.8.7\+dfsg/debian/.debhelper/generated/_source/home jh_linkjars -i -O--buildsystem=gradle debian/rules override_dh_auto_build make[1]: Entering directory '/build/gkl-65r4X4/gkl-0.8.7+dfsg' dh_auto_build -- jar mkdir -p .gradle/init.d cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=gkl -Dfile.encoding=UTF-8 --parallel --max-workers=4 jar Initialized native services in: /build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/native Using 4 worker leases. Creating new cache for fileHashes, path /build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@59d2103b Creating new cache for resourceHashesCache, path /build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@59d2103b Creating new cache for fileHashes, path /build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@681aad3b WARNING: An illegal reflective access operation has occurred WARNING: Illegal reflective access using Lookup on org.gradle.internal.reflect.JavaMethod (file:/usr/share/gradle/lib/gradle-base-services-4.4.1.jar) to class java.lang.ClassLoader WARNING: Please consider reporting this to the maintainers of org.gradle.internal.reflect.JavaMethod WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations WARNING: All illegal access operations will be denied in a future release Starting Build Compiling initialization script '/build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/init.d/init.gradle' using SubsetScriptTransformer. Creating new cache for metadata-1.1/results, path /build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@4694f434 Compiling initialization script '/build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/init.d/init.gradle' using BuildScriptTransformer. Settings evaluated using settings file '/build/gkl-65r4X4/gkl-0.8.7+dfsg/settings.gradle'. Settings file not found (/build/gkl-65r4X4/gkl-0.8.7+dfsg/settings.gradle) Root project name not defined in settings.gradle, defaulting to 'gkl' instead of the name of the root directory 'gkl-0.8.7+dfsg' Projects loaded. Root project using build file '/build/gkl-65r4X4/gkl-0.8.7+dfsg/build.gradle'. Included projects: [root project 'gkl'] Keep-alive timer started Adding Debian repository to project 'gkl' Parallel execution is an incubating feature. Evaluating root project 'gkl' using build file '/build/gkl-65r4X4/gkl-0.8.7+dfsg/build.gradle'. Compiling build file '/build/gkl-65r4X4/gkl-0.8.7+dfsg/build.gradle' using SubsetScriptTransformer. Compiling build file '/build/gkl-65r4X4/gkl-0.8.7+dfsg/build.gradle' using BuildScriptTransformer. Starting process 'command 'dpkg-parsechangelog''. Working directory: /build/gkl-65r4X4/gkl-0.8.7+dfsg Command: dpkg-parsechangelog -S Version Successfully started process 'command 'dpkg-parsechangelog'' Adding Maven pom generation to project 'gkl' Linking the generated javadoc to the system JDK API documentation All projects evaluated. Selected primary task 'jar' from project : Creating new cache for annotation-processors, path /build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@4ec616d6 Tasks to be executed: [task ':compileJava', task ':cmakeConfig', task ':cmakeBuild', task ':copyNativeLib', task ':buildOnMac', task ':processResources', task ':classes', task ':debianMavenPom', task ':jar'] Creating new cache for resourceHashesCache, path /build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@681aad3b Creating new cache for taskHistory, path /build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@25435731 Creating new cache for outputFiles, path /build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@8ecc457 :compileJava (Thread[Task worker for ':',5,main]) started. :compileJava Putting task artifact state for task ':compileJava' into context took 0.107 secs. Creating new cache for metadata-2.36/module-metadata, path /build/gkl-65r4X4/gkl-0.8.7+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@2734d158 Loading the Maven rules... Replacing commons-io:commons-io:jar:2.4 -> commons-io:commons-io:jar:debian Passing through org.apache.commons:commons-parent:jar:debian Passing through org.apache:apache:jar:debian Passing through org.broadinstitute:gatk-native-bindings:jar:debian Replacing org.apache.logging.log4j:log4j-api:jar:2.5 -> org.apache.logging.log4j:log4j-api:jar:debian Passing through org.apache.logging.log4j:log4j:jar:debian Replacing org.apache.logging.log4j:log4j-core:jar:2.5 -> org.apache.logging.log4j:log4j-core:jar:debian Replacing com.github.samtools:htsjdk:jar:2.9.0 -> com.github.samtools:htsjdk:jar:debian Passing through org.apache.commons:commons-jexl:jar:debian Passing through commons-logging:commons-logging:jar:debian Passing through org.xerial.snappy:snappy-java:jar:debian Passing through org.apache.commons:commons-compress:jar:debian Passing through org.tukaani:xz:jar:debian Passing through gov.nih.nlm.ncbi:ngs-java:jar:debian Up-to-date check for task ':compileJava' took 17.894 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':compileJava'. Compiling with JDK Java compiler API. :compileJava (Thread[Task worker for ':',5,main]) completed. Took 31.338 secs. :cmakeConfig (Thread[Task worker for ':',5,main]) started. :cmakeConfig Putting task artifact state for task ':cmakeConfig' into context took 0.0 secs. Up-to-date check for task ':cmakeConfig' took 0.789 secs. It is not up-to-date because: No history is available. Starting process 'command 'cmake''. Working directory: /build/gkl-65r4X4/gkl-0.8.7+dfsg/build/native Command: cmake -Wno-dev /build/gkl-65r4X4/gkl-0.8.7+dfsg Successfully started process 'command 'cmake'' :cmakeConfig (Thread[Task worker for ':',5,main]) completed. Took 4.442 secs. :cmakeBuild (Thread[Task worker for ':',5,main]) started. :cmakeBuild Putting task artifact state for task ':cmakeBuild' into context took 0.021 secs. Up-to-date check for task ':cmakeBuild' took 0.003 secs. It is not up-to-date because: Task.upToDateWhen is false. Starting process 'command 'make''. Working directory: /build/gkl-65r4X4/gkl-0.8.7+dfsg/build/native Command: make install Successfully started process 'command 'make'' configure.ac:23: installing 'build-aux/compile' configure.ac:25: installing 'build-aux/config.guess' configure.ac:25: installing 'build-aux/config.sub' configure.ac:12: installing 'build-aux/install-sh' configure.ac:12: installing 'build-aux/missing' Makefile.am: installing 'build-aux/depcomp' parallel-tests: installing 'build-aux/test-driver' :cmakeBuild (Thread[Task worker for ':',5,main]) completed. Took 3 mins 2.12 secs. :copyNativeLib (Thread[Task worker for ':',5,main]) started. :copyNativeLib Putting task artifact state for task ':copyNativeLib' into context took 0.0 secs. Up-to-date check for task ':copyNativeLib' took 0.088 secs. It is not up-to-date because: No history is available. :copyNativeLib (Thread[Task worker for ':',5,main]) completed. Took 0.216 secs. :buildOnMac (Thread[Task worker for ':',5,main]) started. :buildOnMac Skipping task ':buildOnMac' as task onlyIf is false. :buildOnMac SKIPPED :buildOnMac (Thread[Task worker for ':',5,main]) completed. Took 0.086 secs. :processResources (Thread[Task worker for ':',5,main]) started. :processResources Putting task artifact state for task ':processResources' into context took 0.0 secs. Up-to-date check for task ':processResources' took 0.002 secs. It is not up-to-date because: No history is available. :processResources (Thread[Task worker for ':',5,main]) completed. Took 0.022 secs. :classes (Thread[Task worker for ':',5,main]) started. :classes Skipping task ':classes' as it has no actions. :classes (Thread[Task worker for ':',5,main]) completed. Took 0.0 secs. :debianMavenPom (Thread[Task worker for ':',5,main]) started. :debianMavenPom Putting task artifact state for task ':debianMavenPom' into context took 0.0 secs. Up-to-date check for task ':debianMavenPom' took 0.008 secs. It is not up-to-date because: No history is available. Generating pom file /build/gkl-65r4X4/gkl-0.8.7+dfsg/build/debian/gkl.pom :debianMavenPom (Thread[Task worker for ':',5,main]) completed. Took 0.324 secs. :jar (Thread[Task worker for ':',5,main]) started. :jar Putting task artifact state for task ':jar' into context took 0.0 secs. Up-to-date check for task ':jar' took 0.023 secs. It is not up-to-date because: No history is available. :jar (Thread[Task worker for ':',5,main]) completed. Took 0.717 secs. BUILD SUCCESSFUL in 4m 39s 7 actionable tasks: 7 executed make[1]: Leaving directory '/build/gkl-65r4X4/gkl-0.8.7+dfsg' jh_build -i -O--buildsystem=gradle rm -f debian/libgkl-java.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/gkl-65r4X4/gkl-0.8.7+dfsg' # Tests do not work with locales with a different decimal separator # (for example ',') env LC_ALL=C \ # disable unit tests waiting for testng fix in jcommander not found DEB_HOST_GNU_SYSTEM=linux-gnu DEB_BUILD_ARCH_BITS=64 DEB_TARGET_GNU_CPU=x86_64 DEB_HOST_ARCH_OS=linux LANGUAGE=C.UTF-8 USER=builduser CXXFLAGS=-g -O2 -fdebug-prefix-map=/build/gkl-65r4X4/gkl-0.8.7+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security DEB_BUILD_GNU_TYPE=x86_64-linux-gnu DEB_TARGET_MULTIARCH=x86_64-linux-gnu MMDEBSTRAP_HOOK=customize OBJCFLAGS=-g -O2 -fdebug-prefix-map=/build/gkl-65r4X4/gkl-0.8.7+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security DH_INTERNAL_OPTIONS=-i-O--buildsystem=gradle DEB_BUILD_ARCH_CPU=amd64 SHLVL=0 DEB_HOST_ARCH_LIBC=gnu DEB_HOST_ARCH_ABI=base OLDPWD=/ HOME=/nonexistent DH_OPTIONS= DEB_BUILD_ARCH_ENDIAN=little LDFLAGS=-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now DEB_TARGET_ARCH_BITS=64 DEB_BUILD_GNU_SYSTEM=linux-gnu MAKEFLAGS=w DEB_BUILD_ARCH_OS=linux DEB_TARGET_GNU_TYPE=x86_64-linux-gnu DEB_TARGET_ARCH_CPU=amd64 LOGNAME=builduser DEB_BUILD_ARCH_LIBC=gnu DEB_BUILD_ARCH_ABI=base _=/usr/bin/env DEB_HOST_ARCH=amd64 DEB_TARGET_ARCH_ENDIAN=little DH_INTERNAL_OVERRIDE=dh_auto_test DEBCONF_NONINTERACTIVE_SEEN=true DEB_HOST_GNU_CPU=x86_64 DEB_TARGET_GNU_SYSTEM=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/sbin:/usr/bin:/sbin:/bin ANT_HOME=/usr/share/ant DEB_TARGET_ARCH_OS=linux CFLAGS=-g -O2 -fdebug-prefix-map=/build/gkl-65r4X4/gkl-0.8.7+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security MAKELEVEL=2 DEB_HOST_MULTIARCH=x86_64-linux-gnu SOURCE_DATE_EPOCH=1609870329 FCFLAGS=-g -O2 -fdebug-prefix-map=/build/gkl-65r4X4/gkl-0.8.7+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong OBJCXXFLAGS=-g -O2 -fdebug-prefix-map=/build/gkl-65r4X4/gkl-0.8.7+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security LANG=C.UTF-8 DH_VERBOSE=1 DEB_TARGET_ARCH_LIBC=gnu DEB_TARGET_ARCH_ABI=base DEB_BUILD_OPTIONS=parallel=4 CPPFLAGS=-Wdate-time -D_FORTIFY_SOURCE=2 DEBIAN_FRONTEND=noninteractive DH_INTERNAL_BUILDFLAGS=1 SHELL=/bin/bash DEB_HOST_ARCH_BITS=64 DEB_BUILD_ARCH=amd64 DEB_BUILD_MAINT_OPTIONS=hardening=+all,-pie MMDEBSTRAP_MODE=root DEB_BUILD_GNU_CPU=x86_64 MMDEBSTRAP_APT_CONFIG=/tmp/mmdebstrap.QN7IfhGhqY/tmp/mmdebstrap.apt.conf.AXyj2y44uEhz DEB_HOST_GNU_TYPE=x86_64-linux-gnu JAVA_HOME= LC_ALL=C PWD=/build/gkl-65r4X4/gkl-0.8.7+dfsg DEB_HOST_ARCH_CPU=amd64 DEB_RULES_REQUIRES_ROOT=no FFLAGS=-g -O2 -fdebug-prefix-map=/build/gkl-65r4X4/gkl-0.8.7+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong DEB_BUILD_MULTIARCH=x86_64-linux-gnu MMDEBSTRAP_HOOKSOCK=6 MFLAGS=-w GCJFLAGS=-g -O2 -fdebug-prefix-map=/build/gkl-65r4X4/gkl-0.8.7+dfsg=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong DEB_HOST_ARCH_ENDIAN=little DEB_TARGET_ARCH=amd64 #dh_auto_build -- test make[1]: Leaving directory '/build/gkl-65r4X4/gkl-0.8.7+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -i -O--buildsystem=gradle dh_prep -i -O--buildsystem=gradle rm -f -- debian/libgkl-java.substvars rm -fr -- debian/.debhelper/generated/libgkl-java/ debian/libgkl-java/ debian/tmp/ dh_auto_install -i -O--buildsystem=gradle install -d /build/gkl-65r4X4/gkl-0.8.7\+dfsg/debian/tmp dh_install -i -O--buildsystem=gradle install -d debian/.debhelper/generated/libgkl-java install -d debian/.debhelper/generated/libgkl-jni jh_installjavadoc -i -O--buildsystem=gradle dh_installdocs -i -O--buildsystem=gradle install -d debian/libgkl-java/usr/share/doc/libgkl-java install -p -m0644 debian/README.Debian debian/libgkl-java/usr/share/doc/libgkl-java/README.Debian install -p -m0644 debian/copyright debian/libgkl-java/usr/share/doc/libgkl-java/copyright dh_installchangelogs -i -O--buildsystem=gradle install -p -m0644 debian/changelog debian/libgkl-java/usr/share/doc/libgkl-java/changelog.Debian dh_installsystemduser -i -O--buildsystem=gradle dh_perl -i -O--buildsystem=gradle dh_link -i -O--buildsystem=gradle jh_installlibs -i -O--buildsystem=gradle install -d debian/libgkl-java/usr/share/java install -p -m0644 ./build/libs/gkl-0.8.7.jar debian/libgkl-java/usr/share/java/gkl-0.8.7.jar rm -f debian/libgkl-java/usr/share/java/gkl.jar ln -s gkl-0.8.7.jar debian/libgkl-java/usr/share/java/gkl.jar jh_classpath -i -O--buildsystem=gradle jh_manifest -plibgkl-java "--classpath=/usr/share/java/htsjdk.jar /usr/lib/jvm/default-java/lib/tools.jar /usr/share/java/log4j-api.jar /usr/share/java/log4j-core.jar /usr/share/jaba/gatk-native-bindings.jar" debian/libgkl-java/usr/share/java/gkl.jar Updating symlinked /build/gkl-65r4X4/gkl-0.8.7+dfsg/debian/libgkl-java/usr/share/java/gkl-0.8.7.jar (via debian/libgkl-java/usr/share/java/gkl.jar) Reading manifest from /build/gkl-65r4X4/gkl-0.8.7+dfsg/debian/libgkl-java/usr/share/java/gkl-0.8.7.jar Updating manifest in /build/gkl-65r4X4/gkl-0.8.7+dfsg/debian/libgkl-java/usr/share/java/gkl-0.8.7.jar jh_manifest -i -O--buildsystem=gradle find debian/libgkl-java -name '*.jar' Found usr/share/java/gkl-0.8.7.jar Found symlink usr/share/java/gkl.jar Reading manifest from debian/libgkl-java/usr/share/java/gkl-0.8.7.jar No update of debian/libgkl-java/usr/share/java/gkl-0.8.7.jar required. jh_exec -i -O--buildsystem=gradle jh_depends -i -O--buildsystem=gradle Searching /build/gkl-65r4X4/gkl-0.8.7+dfsg/debian/libgkl-java for libgkl-java Searching /build/gkl-65r4X4/gkl-0.8.7+dfsg/debian/libgkl-java/usr/share/java/gkl-0.8.7.jar Found Jars: /usr/lib/jvm/default-java/lib/tools.jar /usr/share/jaba/gatk-native-bindings.jar /usr/share/java/htsjdk.jar /usr/share/java/log4j-api.jar /usr/share/java/log4j-core.jar Checking: /build/gkl-65r4X4/gkl-0.8.7+dfsg/debian/libgkl-java/usr/lib/jvm/default-java/lib/tools.jar Checking: /build/gkl-65r4X4/gkl-0.8.7+dfsg/debian/libgkl-java/usr/share/jaba/gatk-native-bindings.jar Checking: /build/gkl-65r4X4/gkl-0.8.7+dfsg/debian/libgkl-java/usr/share/java/htsjdk-2.23.0.jar Checking: /build/gkl-65r4X4/gkl-0.8.7+dfsg/debian/libgkl-java/usr/share/java/log4j-api.jar Checking: /build/gkl-65r4X4/gkl-0.8.7+dfsg/debian/libgkl-java/usr/share/java/log4j-core.jar Found Debs: libhtsjdk-java liblog4j2-java Adding substvars: java:Depends=libhtsjdk-java, liblog4j2-java java:Recommends= mh_installpoms -i -O--buildsystem=gradle mh_installpom --package=libgkl-java --usj-name=gkl debian/pom-gkl.xml mh_cleanpom --package=libgkl-java --rules=debian/maven.rules debian/pom-gkl.xml debian/.mh/pom.xml debian/.mh/pom.properties mv debian/.mh/pom.xml debian/.mh/gkl-debian.pom install -m 644 -D debian/.mh/gkl-0.8.5.pom debian/libgkl-java/usr/share/maven-repo/com/intel/gkl/gkl/0.8.5/gkl-0.8.5.pom install -m 644 -D debian/.mh/gkl-debian.pom debian/libgkl-java/usr/share/maven-repo/com/intel/gkl/gkl/debian/gkl-debian.pom mh_linkjars --skip-clean-poms -i -O--buildsystem=gradle mh_linkjar --package=libgkl-java --skip-clean-pom debian/pom-gkl.xml /usr/share/java/gkl.jar dh_link -plibgkl-java /usr/share/javagkl.jar usr/share/maven-repo/com/intel/gkl/gkl/0.8.5/gkl-0.8.5.jar rm -f debian/libgkl-java/usr/share/java/gkl.jar ln -s gkl-0.8.7.jar debian/libgkl-java/usr/share/java/gkl.jar rm -f debian/libgkl-java/usr/share/maven-repo/com/intel/gkl/gkl/0.8.5/gkl-0.8.5.jar ln -s ../../../../../../java/gkl.jar debian/libgkl-java/usr/share/maven-repo/com/intel/gkl/gkl/0.8.5/gkl-0.8.5.jar dh_link -plibgkl-java /usr/share/javagkl.jar usr/share/maven-repo/com/intel/gkl/gkl/debian/gkl-debian.jar rm -f debian/libgkl-java/usr/share/maven-repo/com/intel/gkl/gkl/0.8.5/gkl-0.8.5.jar ln -s ../../../../../../java/gkl.jar debian/libgkl-java/usr/share/maven-repo/com/intel/gkl/gkl/0.8.5/gkl-0.8.5.jar rm -f debian/libgkl-java/usr/share/java/gkl.jar ln -s gkl-0.8.7.jar debian/libgkl-java/usr/share/java/gkl.jar rm -f debian/libgkl-java/usr/share/maven-repo/com/intel/gkl/gkl/debian/gkl-debian.jar ln -s ../../../../../../java/gkl.jar debian/libgkl-java/usr/share/maven-repo/com/intel/gkl/gkl/debian/gkl-debian.jar dh_strip_nondeterminism -i -O--buildsystem=gradle Using 1609870329 as canonical time Normalizing debian/libgkl-java/usr/share/java/gkl-0.8.7.jar using File::StripNondeterminism::handlers::jar dh_compress -i -O--buildsystem=gradle cd debian/libgkl-java chmod a-x usr/share/doc/libgkl-java/changelog.Debian gzip -9nf usr/share/doc/libgkl-java/changelog.Debian cd '/build/gkl-65r4X4/gkl-0.8.7+dfsg' dh_fixperms -i -O--buildsystem=gradle find debian/libgkl-java ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libgkl-java/usr/share/doc -type f -a -true -a ! -regex 'debian/libgkl-java/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libgkl-java/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libgkl-java -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 dh_missing -i -O--buildsystem=gradle dh_installdeb -i -O--buildsystem=gradle install -d debian/libgkl-java/DEBIAN debian/rules override_dh_gencontrol make[1]: Entering directory '/build/gkl-65r4X4/gkl-0.8.7+dfsg' cat debian/control \ | sed -e '/^Build-.*Depends:/,/^[^[:space:]#]/{s/^Build-.*Depends:/ /;p};d' \ | grep '^[[:space:]]' \ | tr ',' '\n' \ > debian/bd-temp-substvars echo -n "bd:libgkl-java=" > debian/bd.substvars grep 'libgkl-java ' debian/bd-temp-substvars \ | tr "\n" "," \ | sed -e 's/[[:space:]]\+/ /g;s/,$/\n/' \ >> debian/bd.substvars dh_gencontrol -O--buildsystem=gradle -- -Tdebian/bd.substvars echo misc:Depends= >> debian/libgkl-java.substvars echo misc:Pre-Depends= >> debian/libgkl-java.substvars dpkg-gencontrol -plibgkl-java -ldebian/changelog -Tdebian/libgkl-java.substvars -Pdebian/libgkl-java -Tdebian/bd.substvars dpkg-gencontrol: warning: Depends field of package libgkl-java: substitution variable ${maven:Depends} used, but is not defined dpkg-gencontrol: warning: package libgkl-java: substitution variable ${java:Depends} unused, but is defined chmod 0644 -- debian/libgkl-java/DEBIAN/control make[1]: Leaving directory '/build/gkl-65r4X4/gkl-0.8.7+dfsg' dh_md5sums -i -O--buildsystem=gradle cd debian/libgkl-java >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libgkl-java/DEBIAN/md5sums dh_builddeb -i -O--buildsystem=gradle dpkg-deb --root-owner-group --build debian/libgkl-java .. dpkg-deb: building package 'libgkl-java' in '../libgkl-java_0.8.7+dfsg-1_all.deb'. dpkg-genbuildinfo --build=all dpkg-genchanges --build=all >../gkl_0.8.7+dfsg-1_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/gkl-65r4X4 /tmp/gkl-0.8.7+dfsg-1eq8gop0l I: cleaning package lists and apt cache... W: deleting files in /tmp: hsperfdata_builduser W: deleting files in /tmp: hsperfdata_root I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.QN7IfhGhqY... I: success in 1103.7433 seconds md5: libgkl-java_0.8.7+dfsg-1_all.deb: OK sha1: libgkl-java_0.8.7+dfsg-1_all.deb: OK sha256: libgkl-java_0.8.7+dfsg-1_all.deb: OK Checksums: OK