Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/e/elastix/elastix_5.0.1-3_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/elastix-5.0.1-3zwxhitt3/elastix_5.0.1-3_amd64.buildinfo Get source package info: elastix=5.0.1-3 Source URL: http://snapshot.notset.fr/mr/package/elastix/5.0.1-3/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.71-2 automake=1:1.16.5-1.3 autopoint=0.21-6 autotools-dev=20220109.1 base-files=12.2 base-passwd=3.5.52 bash=5.1-6+b1 binutils=2.38-4 binutils-common=2.38-4 binutils-x86-64-linux-gnu=2.38-4 bsdextrautils=2.38-4 bsdutils=1:2.38-4 build-essential=12.9 bzip2=1.0.8-5 cmake=3.23.1-2 cmake-data=3.23.1-2 coreutils=8.32-4.1 cpp=4:11.2.0-2 cpp-11=11.3.0-1 dash=0.5.11+git20210903+057cd650a4ed-8 debconf=1.5.79 debhelper=13.7.1 debianutils=5.7-0.2 dh-autoreconf=20 dh-elpa-helper=2.0.10 dh-exec=0.23.4 dh-strip-nondeterminism=1.13.0-1 diffutils=1:3.7-5 dpkg=1.21.7 dpkg-dev=1.21.7 dwz=0.14-1 emacsen-common=3.0.4 file=1:5.41-4 findutils=4.9.0-3 g++=4:11.2.0-2 g++-11=11.3.0-1 gcc=4:11.2.0-2 gcc-11=11.3.0-1 gcc-11-base=11.3.0-1 gcc-12-base=12.1.0-1 gettext=0.21-6 gettext-base=0.21-6 grep=3.7-1 groff-base=1.22.4-8 gzip=1.12-1 hdf5-helpers=1.10.7+repack-4 hostname=3.23 icu-devtools=71.1-3 init-system-helpers=1.62 intltool-debian=0.35.0+20060710.5 libacl1=2.3.1-1 libaec-dev=1.0.6-1 libaec0=1.0.6-1 libarchive-zip-perl=1.68-1 libarchive13=3.6.0-1 libasan6=11.3.0-1 libatomic1=12.1.0-1 libattr1=1:2.5.1-1 libaudit-common=1:3.0.7-1 libaudit1=1:3.0.7-1+b1 libbinutils=2.38-4 libblkid1=2.38-4 libbrotli1=1.0.9-2+b3 libbz2-1.0=1.0.8-5 libc-bin=2.33-7 libc-dev-bin=2.33-7 libc6=2.33-7 libc6-dev=2.33-7 libcap-ng0=0.7.9-2.2+b2 libcap2=1:2.44-1 libcc1-0=12.1.0-1 libcharls-dev=2.3.4-1 libcharls2=2.3.4-1 libcom-err2=1.46.5-2 libcrypt-dev=1:4.4.27-1.1 libcrypt1=1:4.4.27-1.1 libctf-nobfd0=2.38-4 libctf0=2.38-4 libcurl3-gnutls=7.83.1-1 libcurl4=7.83.1-1 libcurl4-openssl-dev=7.83.1-1 libdb5.3=5.3.28+dfsg1-0.8 libdcmtk-dev=3.6.7-1 libdcmtk16=3.6.7-1 libdebconfclient0=0.262 libdebhelper-perl=13.7.1 libdeflate-dev=1.10-2 libdeflate0=1.10-2 libdouble-conversion-dev=3.1.7-4 libdouble-conversion3=3.1.7-4 libdpkg-perl=1.21.7 libelf1=0.187-1 libexpat1=2.4.8-1 libexpat1-dev=2.4.8-1 libffi8=3.4.2-4 libfftw3-bin=3.3.8-2 libfftw3-dev=3.3.8-2 libfftw3-double3=3.3.8-2 libfftw3-long3=3.3.8-2 libfftw3-quad3=3.3.8-2 libfftw3-single3=3.3.8-2 libfile-stripnondeterminism-perl=1.13.0-1 libgcc-11-dev=11.3.0-1 libgcc-s1=12.1.0-1 libgcrypt20=1.10.1-2 libgdbm-compat4=1.23-1 libgdbm6=1.23-1 libgdcm-dev=3.0.12-1 libgdcm3.0=3.0.12-1 libgfortran5=12.1.0-1 libgmp10=2:6.2.1+dfsg-3 libgnutls30=3.7.4-2 libgomp1=12.1.0-1 libgpg-error0=1.45-2 libgssapi-krb5-2=1.19.2-2+b1 libhdf5-103-1=1.10.7+repack-4 libhdf5-cpp-103-1=1.10.7+repack-4 libhdf5-dev=1.10.7+repack-4 libhdf5-fortran-102=1.10.7+repack-4 libhdf5-hl-100=1.10.7+repack-4 libhdf5-hl-cpp-100=1.10.7+repack-4 libhdf5-hl-fortran-100=1.10.7+repack-4 libhogweed6=3.7.3-1 libicu-dev=71.1-3 libicu71=71.1-3 libidn2-0=2.3.2-2 libinsighttoolkit5-dev=5.2.1-4 libinsighttoolkit5.2=5.2.1-4 libisl23=0.24-2 libitm1=12.1.0-1 libjbig-dev=2.1-3.1+b2 libjbig0=2.1-3.1+b2 libjpeg-dev=1:2.1.2-1 libjpeg62-turbo=1:2.1.2-1 libjpeg62-turbo-dev=1:2.1.2-1 libjson-c5=0.16-1 libjsoncpp25=1.9.5-4 libk5crypto3=1.19.2-2+b1 libkeyutils1=1.6.1-3 libkrb5-3=1.19.2-2+b1 libkrb5support0=1.19.2-2+b1 libldap-2.5-0=2.5.12+dfsg-1 liblsan0=12.1.0-1 liblz4-1=1.9.3-2 liblzma-dev=5.2.5-2.1 liblzma5=5.2.5-2.1 libmagic-mgc=1:5.41-4 libmagic1=1:5.41-4 libminc-dev=2.4.03-5 libminc2-5.2.0=2.4.03-5 libmount1=2.38-4 libmpc3=1.2.1-2 libmpfr6=4.1.0-3 libncurses6=6.3+20220423-2 libncursesw6=6.3+20220423-2 libnetcdf-dev=1:4.8.1-1 libnetcdf19=1:4.8.1-1 libnettle8=3.7.3-1 libnghttp2-14=1.47.0-1 libnifti-dev=3.0.1-8 libnifti2-2=3.0.1-8 libnifti2-dev=3.0.1-8 libnifticdf-dev=3.0.1-8 libnifticdf2=3.0.1-8 libniftiio-dev=3.0.1-8 libniftiio2=3.0.1-8 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libopenjp2-7=2.4.0-6 libp11-kit0=0.24.1-1 libpam-modules=1.4.0-13 libpam-modules-bin=1.4.0-13 libpam-runtime=1.4.0-13 libpam0g=1.4.0-13 libpcre2-8-0=10.40-1 libpcre3=2:8.39-14 libperl5.34=5.34.0-4 libpipeline1=1.5.6-1 libpng-dev=1.6.37-5 libpng16-16=1.6.37-5 libprocps8=2:3.3.17-7+b1 libpsl5=0.21.0-1.2 libquadmath0=12.1.0-1 librhash0=1.4.2-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.28+dfsg-4 libsasl2-modules-db=2.1.28+dfsg-4 libseccomp2=2.5.4-1 libselinux1=3.3-1+b2 libsigsegv2=2.14-1 libsmartcols1=2.38-4 libsocket++1=1.12.13+git20131030.5d039ba-1 libssh2-1=1.10.0-3 libssl-dev=1.1.1o-1 libssl1.1=1.1.1o-1 libstdc++-11-dev=11.3.0-1 libstdc++6=12.1.0-1 libsub-override-perl=0.09-2 libsystemd0=250.4-1 libsz2=1.0.6-1 libtasn1-6=4.18.0-4 libtiff-dev=4.3.0-7 libtiff5=4.3.0-7 libtiffxx5=4.3.0-7 libtinfo6=6.3+20220423-2 libtirpc-common=1.3.2-2 libtirpc-dev=1.3.2-2 libtirpc3=1.3.2-2 libtool=2.4.7-4 libtsan0=11.3.0-1 libubsan1=12.1.0-1 libuchardet0=0.0.7-1 libudev1=250.4-1 libunistring2=1.0-1 libuuid1=2.38-4 libuv1=1.44.1-2 libwebp7=1.2.2-2+b1 libwrap0=7.6.q-31 libwrap0-dev=7.6.q-31 libxml2=2.9.14+dfsg-1 libxml2-dev=2.9.14+dfsg-1 libznz-dev=3.0.1-8 libznz3=3.0.1-8 libzstd1=1.5.2+dfsg-1 linux-libc-dev=5.17.3-1 login=1:4.11.1+dfsg1-2 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4.1 man-db=2.10.2-1 mawk=1.3.4.20200120-3+b1 ncurses-base=6.3+20220423-2 ncurses-bin=6.3+20220423-2 patch=2.7.6-7 perl=5.34.0-4 perl-base=5.34.0-4 perl-modules-5.34=5.34.0-4 po-debconf=1.0.21+nmu1 procps=2:3.3.17-7+b1 rpcsvc-proto=1.4.2-4 sed=4.8-1 sensible-utils=0.0.17 sysvinit-utils=3.03-1 tar=1.34+dfsg-1 util-linux=2.38-4 util-linux-extra=2.38-4 xz-utils=5.2.5-2.1 zlib1g=1:1.2.11.dfsg-4 zlib1g-dev=1:1.2.11.dfsg-4 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220607T090313Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220607T090313Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220511T204932Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d elastix=5.0.1-3 && mkdir -p /build/elastix-AqH1Bp && dpkg-source --no-check -x /*.dsc /build/elastix-AqH1Bp/elastix-5.0.1 && chown -R builduser:builduser /build/elastix-AqH1Bp" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/elastix-AqH1Bp/elastix-5.0.1 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1652341256" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/elastix-AqH1Bp /tmp/elastix-5.0.1-3zwxhitt3 bookworm /dev/null deb http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: null I: using /tmp/mmdebstrap.0iol5ihefy as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.0iol5ihefy Reading package lists... Building dependency tree... util-linux is already the newest version (2.38-4). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 135 kB of archives. After this operation, 406 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable/main amd64 libfakeroot amd64 1.28-1 [48.2 kB] Get:2 http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable/main amd64 fakeroot amd64 1.28-1 [87.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 135 kB in 0s (1127 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4628 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.28-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.28-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.28-1_amd64.deb ... Unpacking fakeroot (1.28-1) ... Setting up libfakeroot:amd64 (1.28-1) ... Setting up fakeroot (1.28-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.33-7) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20220607T090313Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20220607T090313Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20220511T204932Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.0iol5ihefy Get:1 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm InRelease [130 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20220511T204932Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm/main Sources [12.0 MB] Get:4 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm/main amd64 Packages [11.5 MB] Fetched 23.7 MB in 20s (1201 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.0iol5ihefy I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d elastix=5.0.1-3 && mkdir -p /build/elastix-AqH1Bp && dpkg-source --no-check -x /*.dsc /build/elastix-AqH1Bp/elastix-5.0.1 && chown -R builduser:builduser /build/elastix-AqH1Bp"' exec /tmp/mmdebstrap.0iol5ihefy Reading package lists... NOTICE: 'elastix' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/elastix.git Please use: git clone https://salsa.debian.org/med-team/elastix.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 20.6 MB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm/main elastix 5.0.1-3 (dsc) [2287 B] Get:2 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm/main elastix 5.0.1-3 (tar) [20.6 MB] Get:3 http://snapshot.notset.fr/archive/debian/20220607T090313Z bookworm/main elastix 5.0.1-3 (diff) [10.4 kB] Fetched 20.6 MB in 16s (1287 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'elastix_5.0.1-3.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting elastix in /build/elastix-AqH1Bp/elastix-5.0.1 dpkg-source: info: unpacking elastix_5.0.1.orig.tar.gz dpkg-source: info: unpacking elastix_5.0.1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying doxygen_cleanup.patch dpkg-source: info: applying no_include_install.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/elastix-AqH1Bp/elastix-5.0.1 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1652341256" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.0iol5ihefy dpkg-buildpackage: info: source package elastix dpkg-buildpackage: info: source version 5.0.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1' dh_auto_configure -- -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=RELEASE -DCMAKE_SKIP_RPATH=ON -DSOURCE_DATE_EPOCH=1652341256 -DBUILD_DOCUMENTATION=ON -DELASTIX_USE_MEVISDICOMTIFF:BOOL=OFF -DUSE_KNNGraphAlphaMutualInformationMetric:BOOL=ON cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=RELEASE -DCMAKE_SKIP_RPATH=ON -DSOURCE_DATE_EPOCH=1652341256 -DBUILD_DOCUMENTATION=ON -DELASTIX_USE_MEVISDICOMTIFF:BOOL=OFF -DUSE_KNNGraphAlphaMutualInformationMetric:BOOL=ON .. -- The C compiler identification is GNU 11.3.0 -- The CXX compiler identification is GNU 11.3.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- The imported target "vtkgdcm" references the file "/usr/lib/x86_64-linux-gnu/libvtkgdcm.so.3.0.12" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmsharpglue" references the file "/usr/lib/cli/vtkgdcm-sharp-3.0/libvtkgdcmsharpglue.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmJava" references the file "/usr/lib/x86_64-linux-gnu/jni/libvtkgdcmJava.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmPython" references the file "/usr/lib/python3/dist-packages/vtkgdcmPython.cpython-310-x86_64-linux-gnu.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmPythonD" references the file "/usr/lib/x86_64-linux-gnu/libvtkgdcmPythonD.so.3.0.12" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmdump" references the file "/usr/bin/gdcmdump" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmdiff" references the file "/usr/bin/gdcmdiff" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmraw" references the file "/usr/bin/gdcmraw" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscanner" references the file "/usr/bin/gdcmscanner" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmanon" references the file "/usr/bin/gdcmanon" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmgendir" references the file "/usr/bin/gdcmgendir" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmimg" references the file "/usr/bin/gdcmimg" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmconv" references the file "/usr/bin/gdcmconv" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmtar" references the file "/usr/bin/gdcmtar" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcminfo" references the file "/usr/bin/gdcminfo" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscu" references the file "/usr/bin/gdcmscu" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmxml" references the file "/usr/bin/gdcmxml" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpap3" references the file "/usr/bin/gdcmpap3" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpdf" references the file "/usr/bin/gdcmpdf" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.7") found components: CXX C -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success CMake Warning at Testing/CMakeLists.txt:41 (message): WARNING: python not found! Some test results can not be evaluated. -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1' dh_auto_build -a cd obj-x86_64-linux-gnu && make -j10 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/elastix-AqH1Bp/elastix-5.0.1 -B/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/CMakeFiles /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Common/CMakeFiles/elxCommon.dir/build.make Common/CMakeFiles/elxCommon.dir/depend make -f Common/ParameterFileParser/CMakeFiles/param.dir/build.make Common/ParameterFileParser/CMakeFiles/param.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Common /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/CMakeFiles/elxCommon.dir/DependInfo.cmake --color= make -f Common/xout/CMakeFiles/xoutlib.dir/build.make Common/xout/CMakeFiles/xoutlib.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/ParameterFileParser /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/ParameterFileParser/CMakeFiles/param.dir/DependInfo.cmake --color= make -f Common/MevisDicomTiff/CMakeFiles/mevisdcmtiff.dir/build.make Common/MevisDicomTiff/CMakeFiles/mevisdcmtiff.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Common/xout /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/xout /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/xout/CMakeFiles/xoutlib.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Common/ParameterFileParser/CMakeFiles/param.dir/build.make Common/ParameterFileParser/CMakeFiles/param.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/MevisDicomTiff /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/MevisDicomTiff/CMakeFiles/mevisdcmtiff.dir/DependInfo.cmake --color= make -f Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/depend make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 1%] Building CXX object Common/ParameterFileParser/CMakeFiles/param.dir/itkParameterFileParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/ParameterFileParser && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/ParameterFileParser/CMakeFiles/param.dir/itkParameterFileParser.cxx.o -MF CMakeFiles/param.dir/itkParameterFileParser.cxx.o.d -o CMakeFiles/param.dir/itkParameterFileParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser/itkParameterFileParser.cxx make -f Common/CMakeFiles/elxCommon.dir/build.make Common/CMakeFiles/elxCommon.dir/build make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Common/MevisDicomTiff/CMakeFiles/mevisdcmtiff.dir/build.make Common/MevisDicomTiff/CMakeFiles/mevisdcmtiff.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Common/xout/CMakeFiles/xoutlib.dir/build.make Common/xout/CMakeFiles/xoutlib.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/elxComputeOverlap.dir/build.make Testing/CMakeFiles/elxComputeOverlap.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 1%] Building CXX object Common/ParameterFileParser/CMakeFiles/param.dir/itkParameterMapInterface.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/ParameterFileParser && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/ParameterFileParser/CMakeFiles/param.dir/itkParameterMapInterface.cxx.o -MF CMakeFiles/param.dir/itkParameterMapInterface.cxx.o.d -o CMakeFiles/param.dir/itkParameterMapInterface.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser/itkParameterMapInterface.cxx make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/elxComputeOverlap.dir/DependInfo.cmake --color= [ 2%] Building CXX object Common/CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o [ 3%] Building CXX object Common/MevisDicomTiff/CMakeFiles/mevisdcmtiff.dir/itkUseMevisDicomTiff.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o -MF CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o.d -o CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Common/itkScaledSingleValuedNonLinearOptimizer.cxx cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/MevisDicomTiff && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/MevisDicomTiff/CMakeFiles/mevisdcmtiff.dir/itkUseMevisDicomTiff.cxx.o -MF CMakeFiles/mevisdcmtiff.dir/itkUseMevisDicomTiff.cxx.o.d -o CMakeFiles/mevisdcmtiff.dir/itkUseMevisDicomTiff.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff/itkUseMevisDicomTiff.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/build [ 3%] Building CXX object Common/CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx.o -MF CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx.o.d -o CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers/itkMoreThuenteLineSearchOptimizer.cxx make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 3%] Building CXX object Common/CMakeFiles/elxCommon.dir/CostFunctions/itkScaledSingleValuedCostFunction.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/CMakeFiles/elxCommon.dir/CostFunctions/itkScaledSingleValuedCostFunction.cxx.o -MF CMakeFiles/elxCommon.dir/CostFunctions/itkScaledSingleValuedCostFunction.cxx.o.d -o CMakeFiles/elxCommon.dir/CostFunctions/itkScaledSingleValuedCostFunction.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions/itkScaledSingleValuedCostFunction.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/elxComputeOverlap.dir/build.make Testing/CMakeFiles/elxComputeOverlap.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 5%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/ANN.cpp.o [ 5%] Building CXX object Testing/CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/c++ -DANNlib_EXPORTS -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/include -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/ANN.cpp.o -MF CMakeFiles/ANNlib.dir/src/ANN.cpp.o.d -o CMakeFiles/ANNlib.dir/src/ANN.cpp.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/ANN.cpp [ 5%] Linking CXX static library ../../bin/libmevisdcmtiff-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o -MF CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o.d -o CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/elxComputeOverlap.cxx [ 4%] Building CXX object Common/CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkLineSearchOptimizer.cxx.o [ 5%] Building CXX object Common/xout/CMakeFiles/xoutlib.dir/xoutmain.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/MevisDicomTiff && /usr/bin/cmake -P CMakeFiles/mevisdcmtiff.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/xout && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel 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-I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Common/CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkLineSearchOptimizer.cxx.o -MF CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkLineSearchOptimizer.cxx.o.d -o CMakeFiles/elxCommon.dir/LineSearchOptimizers/itkLineSearchOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers/itkLineSearchOptimizer.cxx cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/MevisDicomTiff && /usr/bin/cmake -E cmake_link_script CMakeFiles/mevisdcmtiff.dir/link.txt --verbose=1 /usr/bin/ar qc ../../bin/libmevisdcmtiff-5.0.a CMakeFiles/mevisdcmtiff.dir/itkUseMevisDicomTiff.cxx.o /usr/bin/ranlib 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'/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 5%] Building CXX object Testing/CMakeFiles/elxImageCompare.dir/elxImageCompare.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel 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CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/kd_dump.cpp.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/c++ -DANNlib_EXPORTS -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/include -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/kd_dump.cpp.o -MF CMakeFiles/ANNlib.dir/src/kd_dump.cpp.o.d -o CMakeFiles/ANNlib.dir/src/kd_dump.cpp.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/kd_dump.cpp [ 9%] Linking CXX static library ../../bin/libparam-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common/ParameterFileParser && /usr/bin/cmake -P CMakeFiles/param.dir/cmake_clean_target.cmake cd 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators 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-ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/kd_tree.cpp.o -MF CMakeFiles/ANNlib.dir/src/kd_tree.cpp.o.d -o CMakeFiles/ANNlib.dir/src/kd_tree.cpp.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/kd_tree.cpp [ 11%] Linking CXX static library ../bin/libelxCommon-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common && /usr/bin/cmake -P CMakeFiles/elxCommon.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxCommon.dir/link.txt --verbose=1 /usr/bin/ar qc ../bin/libelxCommon-5.0.a CMakeFiles/elxCommon.dir/itkScaledSingleValuedNonLinearOptimizer.cxx.o 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/include -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/kd_util.cpp.o -MF CMakeFiles/ANNlib.dir/src/kd_util.cpp.o.d -o CMakeFiles/ANNlib.dir/src/kd_util.cpp.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/kd_util.cpp [ 13%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/perf.cpp.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/c++ -DANNlib_EXPORTS -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.2 -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/include -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -fPIC -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/CMakeFiles/ANNlib.dir/src/perf.cpp.o -MF CMakeFiles/ANNlib.dir/src/perf.cpp.o.d -o CMakeFiles/ANNlib.dir/src/perf.cpp.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1/src/perf.cpp make -f Testing/CMakeFiles/elxInvertTransform.dir/build.make Testing/CMakeFiles/elxInvertTransform.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/elxInvertTransform.dir/DependInfo.cmake --color= make -f Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/build.make Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/elxInvertTransform.dir/build.make Testing/CMakeFiles/elxInvertTransform.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/build.make Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 13%] Building CXX object Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkAdvancedBSplineDeformableTransformTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkAdvancedBSplineDeformableTransformTest.cxx.o -MF CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkAdvancedBSplineDeformableTransformTest.cxx.o.d -o CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkAdvancedBSplineDeformableTransformTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkAdvancedBSplineDeformableTransformTest.cxx [ 13%] Building CXX object Testing/CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o -MF CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o.d -o CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/elxInvertTransform.cxx [ 13%] Building CXX object Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx make -f Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/build.make Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/DependInfo.cmake --color= make -f Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/build.make Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/build.make Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/build cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 13%] Building CXX object Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkAdvancedRecursiveBSplineTransformTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkAdvancedRecursiveBSplineTransformTest.cxx.o -MF CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkAdvancedRecursiveBSplineTransformTest.cxx.o.d -o CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkAdvancedRecursiveBSplineTransformTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkAdvancedRecursiveBSplineTransformTest.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/build.make Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 13%] Building CXX object Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o -MF CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o.d -o CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkAdvancedLinearInterpolatorTest.cxx [ 13%] Linking CXX shared library ../../../../../bin/libANNlib-5.0.so cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ANNlib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio -shared -Wl,-soname,libANNlib-5.0.so.1 -o ../../../../../bin/libANNlib-5.0.so.1 CMakeFiles/ANNlib.dir/src/ANN.cpp.o CMakeFiles/ANNlib.dir/src/bd_fix_rad_search.cpp.o CMakeFiles/ANNlib.dir/src/bd_pr_search.cpp.o CMakeFiles/ANNlib.dir/src/bd_search.cpp.o CMakeFiles/ANNlib.dir/src/bd_tree.cpp.o CMakeFiles/ANNlib.dir/src/brute.cpp.o CMakeFiles/ANNlib.dir/src/kd_dump.cpp.o CMakeFiles/ANNlib.dir/src/kd_fix_rad_search.cpp.o CMakeFiles/ANNlib.dir/src/kd_pr_search.cpp.o CMakeFiles/ANNlib.dir/src/kd_search.cpp.o CMakeFiles/ANNlib.dir/src/kd_split.cpp.o CMakeFiles/ANNlib.dir/src/kd_tree.cpp.o CMakeFiles/ANNlib.dir/src/kd_util.cpp.o CMakeFiles/ANNlib.dir/src/perf.cpp.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/ann_1.1 && /usr/bin/cmake -E cmake_symlink_library ../../../../../bin/libANNlib-5.0.so.1 ../../../../../bin/libANNlib-5.0.so.1 ../../../../../bin/libANNlib-5.0.so make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 13%] Built target ANNlib make -f Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/build.make 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o -MF CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkBSplineDerivativeKernelFunctionTest.cxx [ 14%] Building CXX object Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ 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Testing/CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 14%] Building CXX object Testing/CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 15%] Building CXX object Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 15%] Linking CXX executable ../bin/itkBSplineDerivativeKernelFunctionTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineDerivativeKernelFunctionTest.dir/itkBSplineDerivativeKernelFunctionTest.cxx.o 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/usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 15%] Built target itkBSplineDerivativeKernelFunctionTest make -f Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 16%] Building CXX object Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o -MF 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--color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 16%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o -MF CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkBSplineInterpolationWeightFunctionTest.cxx [ 16%] Building CXX object Testing/CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/elxInvertTransform.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/elxInvertTransform.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/elxInvertTransform.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 17%] Linking CXX executable ../bin/elxComputeOverlap cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxComputeOverlap.dir/link.txt --verbose=1 [ 17%] Linking CXX executable ../bin/itkBSplineSODerivativeKernelFunctionTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elxComputeOverlap.dir/elxComputeOverlap.cxx.o CMakeFiles/elxComputeOverlap.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/elxComputeOverlap /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkBSplineSODerivativeKernelFunctionTest.cxx.o CMakeFiles/itkBSplineSODerivativeKernelFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineSODerivativeKernelFunctionTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm make -f Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 18%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o -MF CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 18%] Built target itkBSplineSODerivativeKernelFunctionTest make -f Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/build.make Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 18%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o -MF CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o.d -o CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx [ 18%] Built target elxComputeOverlap [ 18%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 19%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 19%] Building CXX object Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 19%] Linking CXX executable ../bin/elxImageCompare cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxImageCompare.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elxImageCompare.dir/elxImageCompare.cxx.o CMakeFiles/elxImageCompare.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/elxImageCompare /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat 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/usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm make -f Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/build.make Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/build.make Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 19%] Building CXX object Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o -MF CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o.d -o CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCompareCompositeTransformsTest.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 19%] Built target elxImageCompare make -f Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/build.make Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/build.make Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 19%] Building CXX object Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkMevisDicomTiffImageIOTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkMevisDicomTiffImageIOTest.cxx.o -MF CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkMevisDicomTiffImageIOTest.cxx.o.d -o CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkMevisDicomTiffImageIOTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkMevisDicomTiffImageIOTest.cxx [ 19%] Linking CXX executable ../bin/itkBSplineInterpolationWeightFunctionTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o CMakeFiles/itkBSplineInterpolationWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineInterpolationWeightFunctionTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm [ 20%] Linking CXX executable ../bin/itkBSplineInterpolationSODerivativeWeightFunctionTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkBSplineInterpolationSODerivativeWeightFunctionTest.cxx.o CMakeFiles/itkBSplineInterpolationSODerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineInterpolationSODerivativeWeightFunctionTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm [ 20%] Linking CXX executable ../bin/elxTransformParametersCompare cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxTransformParametersCompare.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elxTransformParametersCompare.dir/elxTransformParametersCompare.cxx.o CMakeFiles/elxTransformParametersCompare.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/elxTransformParametersCompare ../bin/libparam-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 21%] Linking CXX executable ../bin/itkBSplineInterpolationDerivativeWeightFunctionTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkBSplineInterpolationDerivativeWeightFunctionTest.cxx.o CMakeFiles/itkBSplineInterpolationDerivativeWeightFunctionTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineInterpolationDerivativeWeightFunctionTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm [ 21%] Built target itkBSplineInterpolationWeightFunctionTest make -f Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/build.make Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/build.make Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 21%] Building CXX object Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o -MF CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o.d -o CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkThinPlateSplineTransformPerformanceTest.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 21%] Built target itkBSplineInterpolationSODerivativeWeightFunctionTest make -f Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/build.make Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/build.make Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 22%] Building CXX object Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o -MF CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o.d -o CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkThinPlateSplineTransformTest.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 22%] Built target elxTransformParametersCompare [ 22%] Building CXX object Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkThinPlateSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkThinPlateSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkThinPlateSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 22%] Built target itkBSplineInterpolationDerivativeWeightFunctionTest [ 23%] Building CXX object Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 24%] Building CXX object Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 24%] Linking CXX executable ../bin/itkAdvancedLinearInterpolatorTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkAdvancedLinearInterpolatorTest.cxx.o CMakeFiles/itkAdvancedLinearInterpolatorTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAdvancedLinearInterpolatorTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 24%] Built target itkAdvancedLinearInterpolatorTest make -f Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/build.make Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/build.make Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 24%] Building CXX object Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkAdvanceOneStepParallellizationTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkAdvanceOneStepParallellizationTest.cxx.o -MF CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkAdvanceOneStepParallellizationTest.cxx.o.d -o CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkAdvanceOneStepParallellizationTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkAdvanceOneStepParallellizationTest.cxx [ 24%] Building CXX object Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 24%] Linking CXX executable ../bin/elxInvertTransform cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/elxInvertTransform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/elxInvertTransform.dir/elxInvertTransform.cxx.o CMakeFiles/elxInvertTransform.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/elxInvertTransform ../bin/libparam-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm [ 24%] Linking CXX executable ../bin/itkMevisDicomTiffImageIOTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkMevisDicomTiffImageIOTest.dir/link.txt --verbose=1 [ 24%] Building CXX object Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkMevisDicomTiffImageIOTest.cxx.o CMakeFiles/itkMevisDicomTiffImageIOTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkMevisDicomTiffImageIOTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 24%] Built target itkMevisDicomTiffImageIOTest make -f Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/build.make Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/build.make Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 25%] Building CXX object Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o -MF CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o.d -o CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkAccumulateDerivativesParallellizationTest.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 25%] Built target elxInvertTransform make -f Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/build.make Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/build.make Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 26%] Building CXX object Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o -MF CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o.d -o CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkBSplineTransformPointPerformanceTest.cxx [ 27%] Linking CXX executable ../bin/itkAdvancedBSplineDeformableTransformTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkAdvancedBSplineDeformableTransformTest.cxx.o CMakeFiles/itkAdvancedBSplineDeformableTransformTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAdvancedBSplineDeformableTransformTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm [ 27%] Building CXX object Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 28%] Linking CXX executable ../bin/itkAdvanceOneStepParallellizationTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkAdvanceOneStepParallellizationTest.cxx.o CMakeFiles/itkAdvanceOneStepParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAdvanceOneStepParallellizationTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 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-lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm [ 28%] Building CXX object Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -c 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'/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/build.make Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 28%] Building CXX object Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkBSplineJacobianGradientPerformanceTest.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser 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/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o -MF CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o.d -o CMakeFiles/elxCore.dir/Install/elxComponentDatabase.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Core/Install/elxComponentDatabase.cxx make -f Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 29%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/itkANNBinaryTreeCreator.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/KNN/CMakeFiles/KNNlib.dir/itkANNBinaryTreeCreator.cxx.o -MF CMakeFiles/KNNlib.dir/itkANNBinaryTreeCreator.cxx.o.d -o CMakeFiles/KNNlib.dir/itkANNBinaryTreeCreator.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN/itkANNBinaryTreeCreator.cxx [ 29%] Linking CXX executable ../bin/itkAdvancedRecursiveBSplineTransformTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkAdvancedRecursiveBSplineTransformTest.cxx.o CMakeFiles/itkAdvancedRecursiveBSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAdvancedRecursiveBSplineTransformTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm [ 30%] Linking CXX static library ../../../../bin/libKNNlib-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN && /usr/bin/cmake -P CMakeFiles/KNNlib.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/KNN && /usr/bin/cmake -E cmake_link_script CMakeFiles/KNNlib.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' /usr/bin/ar qc ../../../../bin/libKNNlib-5.0.a CMakeFiles/KNNlib.dir/itkANNBinaryTreeCreator.cxx.o [ 30%] Built target itkAdvancedRecursiveBSplineTransformTest /usr/bin/ranlib ../../../../bin/libKNNlib-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 31%] Building CXX object Core/CMakeFiles/elxCore.dir/Install/elxBaseComponent.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elxCore.dir/Install/elxBaseComponent.cxx.o -MF CMakeFiles/elxCore.dir/Install/elxBaseComponent.cxx.o.d -o CMakeFiles/elxCore.dir/Install/elxBaseComponent.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Core/Install/elxBaseComponent.cxx [ 31%] Built target KNNlib [ 32%] Building CXX object Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 32%] Building CXX object Core/CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o -MF CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o.d -o CMakeFiles/elxCore.dir/Configuration/elxConfiguration.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration/elxConfiguration.cxx [ 33%] Linking CXX executable ../bin/itkAccumulateDerivativesParallellizationTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkAccumulateDerivativesParallellizationTest.cxx.o CMakeFiles/itkAccumulateDerivativesParallellizationTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkAccumulateDerivativesParallellizationTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd 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/usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 33%] Built target itkAccumulateDerivativesParallellizationTest [ 34%] Building CXX object Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Testing/CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -MF CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o.d -o CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Testing/itkCommandLineArgumentParser.cxx [ 34%] Building CXX object Core/CMakeFiles/elxCore.dir/elxProgressCommand.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Core/CMakeFiles/elxCore.dir/elxProgressCommand.cxx.o -MF CMakeFiles/elxCore.dir/elxProgressCommand.cxx.o.d -o CMakeFiles/elxCore.dir/elxProgressCommand.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Core/elxProgressCommand.cxx [ 34%] Linking CXX executable ../bin/itkThinPlateSplineTransformTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkThinPlateSplineTransformTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkThinPlateSplineTransformTest.dir/itkThinPlateSplineTransformTest.cxx.o CMakeFiles/itkThinPlateSplineTransformTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkThinPlateSplineTransformTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm [ 34%] Linking CXX executable ../bin/itkThinPlateSplineTransformPerformanceTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkThinPlateSplineTransformPerformanceTest.cxx.o CMakeFiles/itkThinPlateSplineTransformPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkThinPlateSplineTransformPerformanceTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so 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/usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 34%] Built target itkThinPlateSplineTransformTest make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 34%] Built target itkThinPlateSplineTransformPerformanceTest [ 35%] Linking CXX static library ../bin/libelxCore-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Core && /usr/bin/cmake -P CMakeFiles/elxCore.dir/cmake_clean_target.cmake cd 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/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/DependInfo.cmake --color= make -f Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/build.make Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/depend make -f Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/build.make Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/Full /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Full /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/DependInfo.cmake --color= make -f Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/build.make Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/Grid /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/MultInputRandomCoordinate /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/MultInputRandomCoordinate /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/DependInfo.cmake --color= make -f Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/build.make Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/build make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/build.make Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/build.make Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/Random /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/build.make Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/build.make Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 35%] Building CXX object Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o [ 36%] Building CXX object Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/Grid/CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o -MF CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o.d -o CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/Grid/elxGridSampler.cxx make -f Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/build.make Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/build make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 36%] Building CXX object Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/elxMultiInputRandomCoordinateSampler.cxx.o make -f Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/build.make Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/build make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/MultInputRandomCoordinate && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/MultInputRandomCoordinate/CMakeFiles/MultiInputRandomCoordinateSampler.dir/elxMultiInputRandomCoordinateSampler.cxx.o -MF CMakeFiles/MultiInputRandomCoordinateSampler.dir/elxMultiInputRandomCoordinateSampler.cxx.o.d -o CMakeFiles/MultiInputRandomCoordinateSampler.dir/elxMultiInputRandomCoordinateSampler.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/MultInputRandomCoordinate/elxMultiInputRandomCoordinateSampler.cxx make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/build.make Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedRecursivePyramid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/FixedImagePyramids/FixedRecursivePyramid/CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o -MF CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o.d -o CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids/FixedRecursivePyramid/elxFixedRecursivePyramid.cxx [ 36%] Building CXX object Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/elxFixedGenericPyramid.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedGenericPyramid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/FixedImagePyramids/FixedGenericPyramid/CMakeFiles/FixedGenericPyramid.dir/elxFixedGenericPyramid.cxx.o -MF CMakeFiles/FixedGenericPyramid.dir/elxFixedGenericPyramid.cxx.o.d -o CMakeFiles/FixedGenericPyramid.dir/elxFixedGenericPyramid.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids/FixedGenericPyramid/elxFixedGenericPyramid.cxx [ 37%] Building CXX object Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/FixedImagePyramids/FixedSmoothingPyramid/CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o -MF CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o.d -o CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids/FixedSmoothingPyramid/elxFixedSmoothingPyramid.cxx [ 37%] Building CXX object Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/elxRandomSampler.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/Random/CMakeFiles/RandomSampler.dir/elxRandomSampler.cxx.o -MF CMakeFiles/RandomSampler.dir/elxRandomSampler.cxx.o.d -o CMakeFiles/RandomSampler.dir/elxRandomSampler.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/Random/elxRandomSampler.cxx [ 38%] Building CXX object Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/elxFullSampler.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Full && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/Full/CMakeFiles/FullSampler.dir/elxFullSampler.cxx.o -MF CMakeFiles/FullSampler.dir/elxFullSampler.cxx.o.d -o CMakeFiles/FullSampler.dir/elxFullSampler.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/Full/elxFullSampler.cxx [ 39%] Linking CXX executable ../bin/itkBSplineTransformPointPerformanceTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkBSplineTransformPointPerformanceTest.cxx.o CMakeFiles/itkBSplineTransformPointPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineTransformPointPerformanceTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 39%] Built target itkBSplineTransformPointPerformanceTest make -f Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/build.make Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/RandomCoordinate /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomCoordinate /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/build.make Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 40%] Building CXX object Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/elxRandomCoordinateSampler.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomCoordinate && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/RandomCoordinate/CMakeFiles/RandomCoordinateSampler.dir/elxRandomCoordinateSampler.cxx.o -MF CMakeFiles/RandomCoordinateSampler.dir/elxRandomCoordinateSampler.cxx.o.d -o CMakeFiles/RandomCoordinateSampler.dir/elxRandomCoordinateSampler.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/RandomCoordinate/elxRandomCoordinateSampler.cxx [ 41%] Linking CXX executable ../bin/itkCompareCompositeTransformsTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkCompareCompositeTransformsTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCompareCompositeTransformsTest.cxx.o CMakeFiles/itkCompareCompositeTransformsTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkCompareCompositeTransformsTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm [ 41%] Linking CXX executable ../bin/itkBSplineJacobianGradientPerformanceTest cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Testing && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -lniftiio CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkBSplineJacobianGradientPerformanceTest.cxx.o CMakeFiles/itkBSplineJacobianGradientPerformanceTest.dir/itkCommandLineArgumentParser.cxx.o -o ../bin/itkBSplineJacobianGradientPerformanceTest ../bin/libparam-5.0.a ../bin/libmevisdcmtiff-5.0.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/x86_64-linux-gnu/libpng.so /usr/lib/libITKTestKernel-5.2.so.1 /usr/lib/libITKColormap-5.2.so.1 /usr/lib/libITKConvolution-5.2.so.1 -lofstd -loflog -ldcmdata -li2d -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/libITKDICOMParser-5.2.so.1 /usr/lib/libITKDenoising-5.2.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/libITKIOBruker-5.2.so.1 /usr/lib/libITKIOCSV-5.2.so.1 /usr/lib/libITKIOHDF5-5.2.so.1 /usr/lib/libITKIOJPEG2000-5.2.so.1 /usr/lib/libITKIOLSM-5.2.so.1 -lminc2 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.so /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libdl.so -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/libITKIOMINC-5.2.so.1 /usr/lib/libITKIOMRC-5.2.so.1 /usr/lib/libITKRegistrationMethodsv4-5.2.so.1 /usr/lib/libITKReview-5.2.so.1 /usr/lib/libITKVideoIO-5.2.so.1 /usr/lib/libITKIOMeshBYU-5.2.so.1 /usr/lib/libITKIOMeshFreeSurfer-5.2.so.1 /usr/lib/libITKIOMeshGifti-5.2.so.1 /usr/lib/libITKgiftiio-5.2.so.1 /usr/lib/x86_64-linux-gnu/libexpat.so /usr/lib/libITKIOMeshOBJ-5.2.so.1 /usr/lib/libITKIOMeshOFF-5.2.so.1 /usr/lib/libITKIOMeshVTK-5.2.so.1 /usr/lib/libITKIOMeshBase-5.2.so.1 /usr/lib/libITKOptimizersv4-5.2.so.1 /usr/lib/libitklbfgs-5.2.so.1 /usr/lib/libITKIOBMP-5.2.so.1 /usr/lib/libITKIOGDCM-5.2.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.12 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.12 /usr/lib/libITKIOGIPL-5.2.so.1 /usr/lib/libITKIOJPEG-5.2.so.1 /usr/lib/libITKQuadEdgeMesh-5.2.so.1 /usr/lib/libITKIOMeta-5.2.so.1 /usr/lib/libITKMetaIO-5.2.so.1 /usr/lib/libITKIONIFTI-5.2.so.1 /usr/lib/libITKniftiio-5.2.so.1 /usr/lib/libITKznz-5.2.so.1 /usr/lib/libITKIONRRD-5.2.so.1 /usr/lib/libITKNrrdIO-5.2.so.1 /usr/lib/libITKIOPNG-5.2.so.1 /usr/lib/libITKIOTIFF-5.2.so.1 /usr/lib/libitktiff-5.2.so.1 /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libjpeg.so /usr/lib/libITKIOVTK-5.2.so.1 /usr/lib/libITKLabelMap-5.2.so.1 /usr/lib/libITKFastMarching-5.2.so.1 /usr/lib/libITKPolynomials-5.2.so.1 /usr/lib/libITKBiasCorrection-5.2.so.1 /usr/lib/libITKDeformableMesh-5.2.so.1 /usr/lib/libITKDiffusionTensorImage-5.2.so.1 /usr/lib/libITKPDEDeformableRegistration-5.2.so.1 /usr/lib/libITKImageFeature-5.2.so.1 /usr/lib/libITKOptimizers-5.2.so.1 /usr/lib/libITKFFT-5.2.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/libITKIOBioRad-5.2.so.1 /usr/lib/libITKIOGE-5.2.so.1 /usr/lib/libITKIOSiemens-5.2.so.1 /usr/lib/libITKIOIPL-5.2.so.1 /usr/lib/libitkopenjpeg-5.2.so.1 /usr/lib/libITKIOSpatialObjects-5.2.so.1 /usr/lib/libITKIOXML-5.2.so.1 /usr/lib/libITKIOStimulate-5.2.so.1 /usr/lib/libITKIOTransformHDF5-5.2.so.1 /usr/lib/libITKIOTransformInsightLegacy-5.2.so.1 /usr/lib/libITKIOTransformMatlab-5.2.so.1 /usr/lib/libITKIOTransformBase-5.2.so.1 /usr/lib/libITKTransformFactory-5.2.so.1 /usr/lib/libITKKLMRegionGrowing-5.2.so.1 /usr/lib/libITKMarkovRandomFieldsClassifiers-5.2.so.1 /usr/lib/libITKQuadEdgeMeshFiltering-5.2.so.1 /usr/lib/libITKRegionGrowing-5.2.so.1 /usr/lib/libITKVTK-5.2.so.1 /usr/lib/libITKWatersheds-5.2.so.1 /usr/lib/libITKMathematicalMorphology-5.2.so.1 /usr/lib/libITKStatistics-5.2.so.1 /usr/lib/libitkNetlibSlatec-5.2.so.1 /usr/lib/libITKSpatialObjects-5.2.so.1 /usr/lib/libITKMesh-5.2.so.1 /usr/lib/libITKTransform-5.2.so.1 /usr/lib/libITKPath-5.2.so.1 /usr/lib/libITKSmoothing-5.2.so.1 /usr/lib/libITKIOImageBase-5.2.so.1 /usr/lib/libITKVideoCore-5.2.so.1 /usr/lib/libITKCommon-5.2.so.1 /usr/lib/libitkdouble-conversion-5.2.so.1 /usr/lib/libitksys-5.2.so.1 /usr/lib/libITKVNLInstantiation-5.2.so.1 /usr/lib/libitkvnl_algo-5.2.so.1 /usr/lib/libitkvnl-5.2.so.1 /usr/lib/libitkv3p_netlib-5.2.so.1 /usr/lib/libitkvcl-5.2.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 41%] Built target itkCompareCompositeTransformsTest make -f Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/build.make Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/RandomSparseMask /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/build.make Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 41%] Building CXX object Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/elxRandomSamplerSparseMask.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ImageSamplers/RandomSparseMask/CMakeFiles/RandomSamplerSparseMask.dir/elxRandomSamplerSparseMask.cxx.o -MF CMakeFiles/RandomSamplerSparseMask.dir/elxRandomSamplerSparseMask.cxx.o.d -o CMakeFiles/RandomSamplerSparseMask.dir/elxRandomSamplerSparseMask.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers/RandomSparseMask/elxRandomSamplerSparseMask.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 41%] Built target itkBSplineJacobianGradientPerformanceTest make -f Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/build.make Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators/BSplineInterpolator /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/build.make Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 42%] Building CXX object Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/elxBSplineInterpolator.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Interpolators/BSplineInterpolator/CMakeFiles/BSplineInterpolator.dir/elxBSplineInterpolator.cxx.o -MF CMakeFiles/BSplineInterpolator.dir/elxBSplineInterpolator.cxx.o.d -o CMakeFiles/BSplineInterpolator.dir/elxBSplineInterpolator.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators/BSplineInterpolator/elxBSplineInterpolator.cxx [ 42%] Linking CXX static library ../../../bin/libGridSampler-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid && /usr/bin/cmake -P CMakeFiles/GridSampler.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/GridSampler.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libGridSampler-5.0.a CMakeFiles/GridSampler.dir/elxGridSampler.cxx.o /usr/bin/ranlib ../../../bin/libGridSampler-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 42%] Built target GridSampler make -f Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/build.make Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators/LinearInterpolator /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/build.make Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 42%] Building CXX object Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/elxLinearInterpolator.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Interpolators/LinearInterpolator/CMakeFiles/LinearInterpolator.dir/elxLinearInterpolator.cxx.o -MF CMakeFiles/LinearInterpolator.dir/elxLinearInterpolator.cxx.o.d -o CMakeFiles/LinearInterpolator.dir/elxLinearInterpolator.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators/LinearInterpolator/elxLinearInterpolator.cxx [ 42%] Linking CXX static library ../../../bin/libFullSampler-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Full && /usr/bin/cmake -P CMakeFiles/FullSampler.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Full && /usr/bin/cmake -E cmake_link_script CMakeFiles/FullSampler.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libFullSampler-5.0.a CMakeFiles/FullSampler.dir/elxFullSampler.cxx.o /usr/bin/ranlib ../../../bin/libFullSampler-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 42%] Built target FullSampler make -f Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/build.make Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators/ReducedDimensionBSplineInterpolator /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/build.make Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 43%] Building CXX object Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/elxReducedDimensionBSplineInterpolator.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Interpolators/ReducedDimensionBSplineInterpolator/CMakeFiles/ReducedDimensionBSplineInterpolator.dir/elxReducedDimensionBSplineInterpolator.cxx.o -MF CMakeFiles/ReducedDimensionBSplineInterpolator.dir/elxReducedDimensionBSplineInterpolator.cxx.o.d -o CMakeFiles/ReducedDimensionBSplineInterpolator.dir/elxReducedDimensionBSplineInterpolator.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators/ReducedDimensionBSplineInterpolator/elxReducedDimensionBSplineInterpolator.cxx [ 44%] Linking CXX static library ../../../bin/libRandomSampler-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random && /usr/bin/cmake -P CMakeFiles/RandomSampler.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/Random && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomSampler.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libRandomSampler-5.0.a CMakeFiles/RandomSampler.dir/elxRandomSampler.cxx.o /usr/bin/ranlib ../../../bin/libRandomSampler-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 44%] Built target RandomSampler make -f Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/build.make Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/AdvancedMattesMutualInformation /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/build.make Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 44%] Building CXX object Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/AdvancedMattesMutualInformation/CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o -MF CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o.d -o CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/AdvancedMattesMutualInformation/elxAdvancedMattesMutualInformationMetric.cxx [ 44%] Linking CXX static library ../../../bin/libLinearInterpolator-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator && /usr/bin/cmake -P CMakeFiles/LinearInterpolator.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/LinearInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/LinearInterpolator.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libLinearInterpolator-5.0.a CMakeFiles/LinearInterpolator.dir/elxLinearInterpolator.cxx.o /usr/bin/ranlib ../../../bin/libLinearInterpolator-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 44%] Built target LinearInterpolator make -f Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/build.make Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/AdvancedMeanSquares /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/build.make Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 44%] Building CXX object Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/AdvancedMeanSquares/CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o -MF CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o.d -o CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/AdvancedMeanSquares/elxAdvancedMeanSquaresMetric.cxx [ 44%] Linking CXX static library ../../../bin/libBSplineInterpolator-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator && /usr/bin/cmake -P CMakeFiles/BSplineInterpolator.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/BSplineInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/BSplineInterpolator.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libBSplineInterpolator-5.0.a CMakeFiles/BSplineInterpolator.dir/elxBSplineInterpolator.cxx.o /usr/bin/ranlib ../../../bin/libBSplineInterpolator-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 44%] Built target BSplineInterpolator make -f Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/build.make Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/AdvancedNormalizedCorrelation /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/build.make Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 44%] Building CXX object Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/AdvancedNormalizedCorrelation/CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o -MF CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o.d -o CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/AdvancedNormalizedCorrelation/elxAdvancedNormalizedCorrelationMetric.cxx [ 45%] Linking CXX static library ../../../bin/libRandomSamplerSparseMask-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask && /usr/bin/cmake -P CMakeFiles/RandomSamplerSparseMask.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomSparseMask && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomSamplerSparseMask.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libRandomSamplerSparseMask-5.0.a CMakeFiles/RandomSamplerSparseMask.dir/elxRandomSamplerSparseMask.cxx.o /usr/bin/ranlib ../../../bin/libRandomSamplerSparseMask-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 45%] Built target RandomSamplerSparseMask make -f Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/build.make Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/BendingEnergyPenalty /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/BendingEnergyPenalty /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/build.make Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 45%] Building CXX object Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/elxTransformBendingEnergyPenaltyTerm.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/BendingEnergyPenalty && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/BendingEnergyPenalty/CMakeFiles/TransformBendingEnergyPenalty.dir/elxTransformBendingEnergyPenaltyTerm.cxx.o -MF CMakeFiles/TransformBendingEnergyPenalty.dir/elxTransformBendingEnergyPenaltyTerm.cxx.o.d -o CMakeFiles/TransformBendingEnergyPenalty.dir/elxTransformBendingEnergyPenaltyTerm.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/BendingEnergyPenalty/elxTransformBendingEnergyPenaltyTerm.cxx [ 45%] Linking CXX static library ../../../bin/libReducedDimensionBSplineInterpolator-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator && /usr/bin/cmake -P CMakeFiles/ReducedDimensionBSplineInterpolator.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Interpolators/ReducedDimensionBSplineInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedDimensionBSplineInterpolator.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libReducedDimensionBSplineInterpolator-5.0.a CMakeFiles/ReducedDimensionBSplineInterpolator.dir/elxReducedDimensionBSplineInterpolator.cxx.o /usr/bin/ranlib ../../../bin/libReducedDimensionBSplineInterpolator-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 45%] Built target ReducedDimensionBSplineInterpolator make -f Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/build.make Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/build.make Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 45%] Building CXX object Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/elxCorrespondingPointsEuclideanDistanceMetric.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/elxCorrespondingPointsEuclideanDistanceMetric.cxx.o -MF CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/elxCorrespondingPointsEuclideanDistanceMetric.cxx.o.d -o CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/elxCorrespondingPointsEuclideanDistanceMetric.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric/elxCorrespondingPointsEuclideanDistanceMetric.cxx [ 46%] Linking CXX static library ../../../bin/libMultiInputRandomCoordinateSampler-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/MultInputRandomCoordinate && /usr/bin/cmake -P CMakeFiles/MultiInputRandomCoordinateSampler.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/MultInputRandomCoordinate && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiInputRandomCoordinateSampler.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libMultiInputRandomCoordinateSampler-5.0.a CMakeFiles/MultiInputRandomCoordinateSampler.dir/elxMultiInputRandomCoordinateSampler.cxx.o /usr/bin/ranlib ../../../bin/libMultiInputRandomCoordinateSampler-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 46%] Built target MultiInputRandomCoordinateSampler make -f Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/build.make Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/DistancePreservingRigidityPenalty /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/build.make Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 47%] Building CXX object Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/DistancePreservingRigidityPenalty/CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o -MF CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o.d -o CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/DistancePreservingRigidityPenalty/elxDistancePreservingRigidityPenaltyTerm.cxx [ 47%] Linking CXX static library ../../../bin/libRandomCoordinateSampler-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomCoordinate && /usr/bin/cmake -P CMakeFiles/RandomCoordinateSampler.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ImageSamplers/RandomCoordinate && /usr/bin/cmake -E cmake_link_script CMakeFiles/RandomCoordinateSampler.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libRandomCoordinateSampler-5.0.a CMakeFiles/RandomCoordinateSampler.dir/elxRandomCoordinateSampler.cxx.o /usr/bin/ranlib ../../../bin/libRandomCoordinateSampler-5.0.a [ 48%] Linking CXX static library ../../../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric && /usr/bin/cmake -P CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/CorrespondingPointsEuclideanDistanceMetric && /usr/bin/cmake -E cmake_link_script CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a CMakeFiles/CorrespondingPointsEuclideanDistanceMetric.dir/elxCorrespondingPointsEuclideanDistanceMetric.cxx.o /usr/bin/ranlib ../../../bin/libCorrespondingPointsEuclideanDistanceMetric-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 48%] Built target RandomCoordinateSampler make -f Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/build.make Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 48%] Building CXX object Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/KNN -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/KNNGraphAlphaMutualInformation/CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o -MF CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o.d -o CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/KNNGraphAlphaMutualInformation/elxKNNGraphAlphaMutualInformationMetric.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 48%] Built target CorrespondingPointsEuclideanDistanceMetric make -f Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/build.make Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/NormalizedMutualInformation /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/build.make Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 48%] Building CXX object Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/NormalizedMutualInformation/CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o -MF CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o.d -o CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/NormalizedMutualInformation/elxNormalizedMutualInformationMetric.cxx [ 48%] Linking CXX static library ../../../bin/libAdvancedNormalizedCorrelationMetric-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation && /usr/bin/cmake -P CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedNormalizedCorrelation && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libAdvancedNormalizedCorrelationMetric-5.0.a CMakeFiles/AdvancedNormalizedCorrelationMetric.dir/elxAdvancedNormalizedCorrelationMetric.cxx.o [ 48%] Linking CXX static library ../../../bin/libFixedRecursivePyramid-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedRecursivePyramid && /usr/bin/cmake -P CMakeFiles/FixedRecursivePyramid.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedRecursivePyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/FixedRecursivePyramid.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libFixedRecursivePyramid-5.0.a CMakeFiles/FixedRecursivePyramid.dir/elxFixedRecursivePyramid.cxx.o /usr/bin/ranlib ../../../bin/libAdvancedNormalizedCorrelationMetric-5.0.a [ 49%] Linking CXX static library ../../../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation && /usr/bin/cmake -P CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/KNNGraphAlphaMutualInformation && /usr/bin/cmake -E cmake_link_script CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a CMakeFiles/KNNGraphAlphaMutualInformationMetric.dir/elxKNNGraphAlphaMutualInformationMetric.cxx.o [ 50%] Linking CXX static library ../../../bin/libNormalizedMutualInformationMetric-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation && /usr/bin/cmake -P CMakeFiles/NormalizedMutualInformationMetric.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/NormalizedMutualInformation && /usr/bin/cmake -E cmake_link_script CMakeFiles/NormalizedMutualInformationMetric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libNormalizedMutualInformationMetric-5.0.a CMakeFiles/NormalizedMutualInformationMetric.dir/elxNormalizedMutualInformationMetric.cxx.o [ 50%] Linking CXX static library ../../../bin/libDistancePreservingRigidityPenalty-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty && /usr/bin/cmake -P CMakeFiles/DistancePreservingRigidityPenalty.dir/cmake_clean_target.cmake /usr/bin/ranlib ../../../bin/libFixedRecursivePyramid-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/DistancePreservingRigidityPenalty && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistancePreservingRigidityPenalty.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libDistancePreservingRigidityPenalty-5.0.a CMakeFiles/DistancePreservingRigidityPenalty.dir/elxDistancePreservingRigidityPenaltyTerm.cxx.o [ 51%] Linking CXX static library ../../../bin/libAdvancedMeanSquaresMetric-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares && /usr/bin/cmake -P CMakeFiles/AdvancedMeanSquaresMetric.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMeanSquares && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedMeanSquaresMetric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libAdvancedMeanSquaresMetric-5.0.a CMakeFiles/AdvancedMeanSquaresMetric.dir/elxAdvancedMeanSquaresMetric.cxx.o [ 51%] Linking CXX static library ../../../bin/libTransformBendingEnergyPenalty-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/BendingEnergyPenalty && /usr/bin/cmake -P CMakeFiles/TransformBendingEnergyPenalty.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/BendingEnergyPenalty && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformBendingEnergyPenalty.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libTransformBendingEnergyPenalty-5.0.a CMakeFiles/TransformBendingEnergyPenalty.dir/elxTransformBendingEnergyPenaltyTerm.cxx.o [ 52%] Linking CXX static library ../../../bin/libAdvancedMattesMutualInformationMetric-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation && /usr/bin/cmake -P CMakeFiles/AdvancedMattesMutualInformationMetric.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/AdvancedMattesMutualInformation && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedMattesMutualInformationMetric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libAdvancedMattesMutualInformationMetric-5.0.a CMakeFiles/AdvancedMattesMutualInformationMetric.dir/elxAdvancedMattesMutualInformationMetric.cxx.o /usr/bin/ranlib ../../../bin/libNormalizedMutualInformationMetric-5.0.a /usr/bin/ranlib ../../../bin/libKNNGraphAlphaMutualInformationMetric-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 52%] Built target AdvancedNormalizedCorrelationMetric make -f Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/build.make Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/PCAMetric /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/build.make Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 52%] Linking CXX static library ../../../bin/libFixedSmoothingPyramid-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid && /usr/bin/cmake -P CMakeFiles/FixedSmoothingPyramid.dir/cmake_clean_target.cmake [ 52%] Building CXX object Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/elxPCAMetric.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/PCAMetric/CMakeFiles/PCAMetric.dir/elxPCAMetric.cxx.o -MF CMakeFiles/PCAMetric.dir/elxPCAMetric.cxx.o.d -o CMakeFiles/PCAMetric.dir/elxPCAMetric.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/PCAMetric/elxPCAMetric.cxx cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedSmoothingPyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/FixedSmoothingPyramid.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libFixedSmoothingPyramid-5.0.a CMakeFiles/FixedSmoothingPyramid.dir/elxFixedSmoothingPyramid.cxx.o [ 53%] Linking CXX static library ../../../bin/libFixedGenericPyramid-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedGenericPyramid && /usr/bin/cmake -P CMakeFiles/FixedGenericPyramid.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/FixedImagePyramids/FixedGenericPyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/FixedGenericPyramid.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libFixedGenericPyramid-5.0.a CMakeFiles/FixedGenericPyramid.dir/elxFixedGenericPyramid.cxx.o /usr/bin/ranlib ../../../bin/libTransformBendingEnergyPenalty-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 53%] Built target FixedRecursivePyramid make -f Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/build.make Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/PCAMetric2 /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric2 /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/build.make Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 54%] Building CXX object Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/elxPCAMetric2.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric2 && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/PCAMetric2/CMakeFiles/PCAMetric2.dir/elxPCAMetric2.cxx.o -MF CMakeFiles/PCAMetric2.dir/elxPCAMetric2.cxx.o.d -o CMakeFiles/PCAMetric2.dir/elxPCAMetric2.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/PCAMetric2/elxPCAMetric2.cxx /usr/bin/ranlib ../../../bin/libDistancePreservingRigidityPenalty-5.0.a /usr/bin/ranlib ../../../bin/libAdvancedMeanSquaresMetric-5.0.a /usr/bin/ranlib ../../../bin/libAdvancedMattesMutualInformationMetric-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 54%] Built target NormalizedMutualInformationMetric make -f Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/build.make Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/RigidityPenalty /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/build.make Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 55%] Building CXX object Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/RigidityPenalty/CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o -MF CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o.d -o CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/RigidityPenalty/elxTransformRigidityPenaltyTerm.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 55%] Built target TransformBendingEnergyPenalty make -f Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/build.make Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/depend [ 55%] Built target KNNGraphAlphaMutualInformationMetric make -f Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/build.make Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/SumOfPairwiseCorrelationsMetric /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/build.make Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/build make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/build.make Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 55%] Building CXX object Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/elxSumSquaredTissueVolumeDifferenceMetric.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/elxSumSquaredTissueVolumeDifferenceMetric.cxx.o -MF CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/elxSumSquaredTissueVolumeDifferenceMetric.cxx.o.d -o CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/elxSumSquaredTissueVolumeDifferenceMetric.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric/elxSumSquaredTissueVolumeDifferenceMetric.cxx [ 55%] Building CXX object Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/SumOfPairwiseCorrelationsMetric/CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o -MF CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o.d -o CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/SumOfPairwiseCorrelationsMetric/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx /usr/bin/ranlib ../../../bin/libFixedSmoothingPyramid-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' /usr/bin/ranlib ../../../bin/libFixedGenericPyramid-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 55%] Built target DistancePreservingRigidityPenalty make -f Components/Metrics/VarianceOverLastDimension/CMakeFiles/VarianceOverLastDimensionMetric.dir/build.make Components/Metrics/VarianceOverLastDimension/CMakeFiles/VarianceOverLastDimensionMetric.dir/depend [ 55%] Built target AdvancedMattesMutualInformationMetric make -f Components/MovingImagePyramids/MovingGenericPyramid/CMakeFiles/MovingGenericPyramid.dir/build.make Components/MovingImagePyramids/MovingGenericPyramid/CMakeFiles/MovingGenericPyramid.dir/depend [ 55%] Built target AdvancedMeanSquaresMetric make -f Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/build.make Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/VarianceOverLastDimension /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/VarianceOverLastDimension /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/VarianceOverLastDimension/CMakeFiles/VarianceOverLastDimensionMetric.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids/MovingGenericPyramid /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingGenericPyramid /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingGenericPyramid/CMakeFiles/MovingGenericPyramid.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids/MovingRecursivePyramid /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/build.make Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/build make -f Components/MovingImagePyramids/MovingGenericPyramid/CMakeFiles/MovingGenericPyramid.dir/build.make Components/MovingImagePyramids/MovingGenericPyramid/CMakeFiles/MovingGenericPyramid.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 56%] Building CXX object Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/elxMovingRecursivePyramid.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/MovingImagePyramids/MovingRecursivePyramid/CMakeFiles/MovingRecursivePyramid.dir/elxMovingRecursivePyramid.cxx.o -MF CMakeFiles/MovingRecursivePyramid.dir/elxMovingRecursivePyramid.cxx.o.d -o CMakeFiles/MovingRecursivePyramid.dir/elxMovingRecursivePyramid.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids/MovingRecursivePyramid/elxMovingRecursivePyramid.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Metrics/VarianceOverLastDimension/CMakeFiles/VarianceOverLastDimensionMetric.dir/build.make Components/Metrics/VarianceOverLastDimension/CMakeFiles/VarianceOverLastDimensionMetric.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 57%] Building CXX object Components/MovingImagePyramids/MovingGenericPyramid/CMakeFiles/MovingGenericPyramid.dir/elxMovingGenericPyramid.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingGenericPyramid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/MovingImagePyramids/MovingGenericPyramid/CMakeFiles/MovingGenericPyramid.dir/elxMovingGenericPyramid.cxx.o -MF CMakeFiles/MovingGenericPyramid.dir/elxMovingGenericPyramid.cxx.o.d -o CMakeFiles/MovingGenericPyramid.dir/elxMovingGenericPyramid.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids/MovingGenericPyramid/elxMovingGenericPyramid.cxx [ 57%] Building CXX object Components/Metrics/VarianceOverLastDimension/CMakeFiles/VarianceOverLastDimensionMetric.dir/elxVarianceOverLastDimensionMetric.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/VarianceOverLastDimension && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Metrics/VarianceOverLastDimension/CMakeFiles/VarianceOverLastDimensionMetric.dir/elxVarianceOverLastDimensionMetric.cxx.o -MF CMakeFiles/VarianceOverLastDimensionMetric.dir/elxVarianceOverLastDimensionMetric.cxx.o.d -o CMakeFiles/VarianceOverLastDimensionMetric.dir/elxVarianceOverLastDimensionMetric.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics/VarianceOverLastDimension/elxVarianceOverLastDimensionMetric.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 57%] Built target FixedSmoothingPyramid make -f Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/build.make Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids/MovingSmoothingPyramid /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingSmoothingPyramid /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/build.make Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 57%] Built target FixedGenericPyramid make -f Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/build.make Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/depend [ 57%] Building CXX object Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/elxMovingSmoothingPyramid.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingSmoothingPyramid && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/MovingImagePyramids/MovingSmoothingPyramid/CMakeFiles/MovingSmoothingPyramid.dir/elxMovingSmoothingPyramid.cxx.o -MF CMakeFiles/MovingSmoothingPyramid.dir/elxMovingSmoothingPyramid.cxx.o.d -o CMakeFiles/MovingSmoothingPyramid.dir/elxMovingSmoothingPyramid.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids/MovingSmoothingPyramid/elxMovingSmoothingPyramid.cxx make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/AdaGrad /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/build.make Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 58%] Building CXX object Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/elxAdaGrad.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/elxAdaGrad.cxx.o -MF CMakeFiles/AdaGrad.dir/elxAdaGrad.cxx.o.d -o 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-isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o -MF CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o.d -o CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/AdaGrad/itkAdaptiveStepsizeOptimizer.cxx [ 59%] Building CXX object Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -MF 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaGrad/CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -MF CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o.d -o CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkGradientDescentOptimizer2.cxx [ 59%] Linking CXX static library ../../../bin/libAdaGrad-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/cmake -P CMakeFiles/AdaGrad.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaGrad && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaGrad.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libAdaGrad-5.0.a CMakeFiles/AdaGrad.dir/elxAdaGrad.cxx.o CMakeFiles/AdaGrad.dir/itkAdaptiveStepsizeOptimizer.cxx.o CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o CMakeFiles/AdaGrad.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o /usr/bin/ranlib ../../../bin/libAdaGrad-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 59%] Built target AdaGrad make -f Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/build.make 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/elxAdaptiveStochasticGradientDescent.cxx.o -MF CMakeFiles/AdaptiveStochasticGradientDescent.dir/elxAdaptiveStochasticGradientDescent.cxx.o.d -o CMakeFiles/AdaptiveStochasticGradientDescent.dir/elxAdaptiveStochasticGradientDescent.cxx.o -c 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make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticLBFGS /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/build.make Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 61%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticLBFGS/elxAdaptiveStochasticLBFGS.cxx [ 62%] Linking CXX static library ../../../bin/libSumSquaredTissueVolumeDifferenceMetric-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric && /usr/bin/cmake -P CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumSquaredTissueVolumeDifferenceMetric && /usr/bin/cmake -E cmake_link_script CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libSumSquaredTissueVolumeDifferenceMetric-5.0.a CMakeFiles/SumSquaredTissueVolumeDifferenceMetric.dir/elxSumSquaredTissueVolumeDifferenceMetric.cxx.o /usr/bin/ranlib ../../../bin/libSumSquaredTissueVolumeDifferenceMetric-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 62%] Built target SumSquaredTissueVolumeDifferenceMetric [ 62%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticLBFGS/itkAdaptiveStochasticLBFGSOptimizer.cxx [ 63%] Linking CXX static library ../../../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric && /usr/bin/cmake -P CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/SumOfPairwiseCorrelationsMetric && /usr/bin/cmake -E cmake_link_script CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a CMakeFiles/SumOfPairwiseCorrelationCoefficientsMetric.dir/elxSumOfPairwiseCorrelationCoefficientsMetric.cxx.o /usr/bin/ranlib ../../../bin/libSumOfPairwiseCorrelationCoefficientsMetric-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 63%] Built target SumOfPairwiseCorrelationCoefficientsMetric make -f Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/build.make Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/build.make Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 64%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o -MF CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o.d -o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/elxAdaptiveStochasticVarianceReducedGradient.cxx [ 65%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx [ 65%] Linking CXX static library ../../../bin/libPCAMetric-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric && /usr/bin/cmake -P CMakeFiles/PCAMetric.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/PCAMetric && /usr/bin/cmake -E cmake_link_script CMakeFiles/PCAMetric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libPCAMetric-5.0.a CMakeFiles/PCAMetric.dir/elxPCAMetric.cxx.o [ 66%] Linking CXX static library ../../../bin/libVarianceOverLastDimensionMetric-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/VarianceOverLastDimension && /usr/bin/cmake -P CMakeFiles/VarianceOverLastDimensionMetric.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/VarianceOverLastDimension && /usr/bin/cmake -E cmake_link_script CMakeFiles/VarianceOverLastDimensionMetric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libVarianceOverLastDimensionMetric-5.0.a CMakeFiles/VarianceOverLastDimensionMetric.dir/elxVarianceOverLastDimensionMetric.cxx.o [ 66%] Building CXX object Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o cd 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-D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticLBFGS/CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx [ 66%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP 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Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx [ 67%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER 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Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx [ 67%] Building CXX object Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP 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Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient/itkStochasticVarianceReducedGradientDescentOptimizer.cxx [ 67%] Building CXX object Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers 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Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticGradientDescent.dir/itkAdaptiveStochasticGradientDescentOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/AdaptiveStochasticGradientDescent/itkAdaptiveStochasticGradientDescentOptimizer.cxx [ 68%] Building CXX object Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -MF CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o.d -o CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx [ 68%] Building CXX object Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/AdaptiveStochasticGradientDescent/CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -MF CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o.d -o CMakeFiles/AdaptiveStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkGradientDescentOptimizer2.cxx make -f Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/build.make Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/ConjugateGradient /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/ConjugateGradient /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/build.make Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 68%] Building CXX object Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/elxConjugateGradient.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/ConjugateGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/elxConjugateGradient.cxx.o -MF CMakeFiles/ConjugateGradient.dir/elxConjugateGradient.cxx.o.d -o CMakeFiles/ConjugateGradient.dir/elxConjugateGradient.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/ConjugateGradient/elxConjugateGradient.cxx /usr/bin/ranlib ../../../bin/libVarianceOverLastDimensionMetric-5.0.a /usr/bin/ranlib ../../../bin/libPCAMetric-5.0.a [ 68%] Linking CXX static library ../../../bin/libAdaptiveStochasticGradientDescent-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/cmake -P CMakeFiles/AdaptiveStochasticGradientDescent.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaptiveStochasticGradientDescent.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libAdaptiveStochasticGradientDescent-5.0.a CMakeFiles/AdaptiveStochasticGradientDescent.dir/elxAdaptiveStochasticGradientDescent.cxx.o 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'/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/FiniteDifferenceGradientDescent /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/FullSearch /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/build.make Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 68%] Building CXX object Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/elxFiniteDifferenceGradientDescent.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/elxFiniteDifferenceGradientDescent.cxx.o -MF CMakeFiles/FiniteDifferenceGradientDescent.dir/elxFiniteDifferenceGradientDescent.cxx.o.d -o CMakeFiles/FiniteDifferenceGradientDescent.dir/elxFiniteDifferenceGradientDescent.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/FiniteDifferenceGradientDescent/elxFiniteDifferenceGradientDescent.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/build.make Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 68%] Building CXX object Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o -MF CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o.d -o CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/FullSearch/elxFullSearchOptimizer.cxx /usr/bin/ranlib ../../../bin/libAdaptiveStochasticGradientDescent-5.0.a [ 68%] Building CXX object Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/itkGenericConjugateGradientOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/ConjugateGradient && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/ConjugateGradient/CMakeFiles/ConjugateGradient.dir/itkGenericConjugateGradientOptimizer.cxx.o -MF CMakeFiles/ConjugateGradient.dir/itkGenericConjugateGradientOptimizer.cxx.o.d -o CMakeFiles/ConjugateGradient.dir/itkGenericConjugateGradientOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/ConjugateGradient/itkGenericConjugateGradientOptimizer.cxx [ 69%] Linking CXX static library ../../../bin/libConjugateGradient-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/ConjugateGradient && /usr/bin/cmake -P CMakeFiles/ConjugateGradient.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/ConjugateGradient && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConjugateGradient.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libConjugateGradient-5.0.a CMakeFiles/ConjugateGradient.dir/elxConjugateGradient.cxx.o CMakeFiles/ConjugateGradient.dir/itkGenericConjugateGradientOptimizer.cxx.o [ 69%] Building CXX object Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/FiniteDifferenceGradientDescent/CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o -MF CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o.d -o CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/FiniteDifferenceGradientDescent/itkFiniteDifferenceGradientDescentOptimizer.cxx [ 70%] Linking CXX static library ../../../bin/libFiniteDifferenceGradientDescent-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent && /usr/bin/cmake -P CMakeFiles/FiniteDifferenceGradientDescent.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FiniteDifferenceGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/FiniteDifferenceGradientDescent.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libFiniteDifferenceGradientDescent-5.0.a CMakeFiles/FiniteDifferenceGradientDescent.dir/elxFiniteDifferenceGradientDescent.cxx.o CMakeFiles/FiniteDifferenceGradientDescent.dir/itkFiniteDifferenceGradientDescentOptimizer.cxx.o /usr/bin/ranlib ../../../bin/libConjugateGradient-5.0.a [ 70%] Linking CXX static library ../../../bin/libMovingRecursivePyramid-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid && /usr/bin/cmake -P CMakeFiles/MovingRecursivePyramid.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingRecursivePyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/MovingRecursivePyramid.dir/link.txt --verbose=1 /usr/bin/ranlib ../../../bin/libFiniteDifferenceGradientDescent-5.0.a /usr/bin/ar qc ../../../bin/libMovingRecursivePyramid-5.0.a CMakeFiles/MovingRecursivePyramid.dir/elxMovingRecursivePyramid.cxx.o make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 70%] Built target ConjugateGradient make -f Components/Optimizers/Powell/CMakeFiles/Powell.dir/build.make Components/Optimizers/Powell/CMakeFiles/Powell.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/Powell /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/Powell /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/Powell/CMakeFiles/Powell.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/Powell/CMakeFiles/Powell.dir/build.make Components/Optimizers/Powell/CMakeFiles/Powell.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 71%] Building CXX object Components/Optimizers/Powell/CMakeFiles/Powell.dir/elxPowell.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/Powell && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/Powell/CMakeFiles/Powell.dir/elxPowell.cxx.o -MF CMakeFiles/Powell.dir/elxPowell.cxx.o.d -o CMakeFiles/Powell.dir/elxPowell.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/Powell/elxPowell.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 71%] Built target FiniteDifferenceGradientDescent make -f Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/build.make Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/PreconditionedStochasticGradientDescent /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/build.make Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 71%] Building CXX object Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/elxPreconditionedStochasticGradientDescent.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/elxPreconditionedStochasticGradientDescent.cxx.o -MF CMakeFiles/PreconditionedStochasticGradientDescent.dir/elxPreconditionedStochasticGradientDescent.cxx.o.d -o CMakeFiles/PreconditionedStochasticGradientDescent.dir/elxPreconditionedStochasticGradientDescent.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/PreconditionedStochasticGradientDescent/elxPreconditionedStochasticGradientDescent.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 71%] Built target AdaptiveStochasticGradientDescent make -f Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/build.make Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/QuasiNewtonLBFGS /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/build.make Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 71%] Building CXX object Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o -MF CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o.d -o CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/QuasiNewtonLBFGS/elxQuasiNewtonLBFGS.cxx [ 71%] Linking CXX static library ../../../bin/libAdaptiveStochasticLBFGS-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/cmake -P CMakeFiles/AdaptiveStochasticLBFGS.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticLBFGS && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaptiveStochasticLBFGS.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libAdaptiveStochasticLBFGS-5.0.a CMakeFiles/AdaptiveStochasticLBFGS.dir/elxAdaptiveStochasticLBFGS.cxx.o CMakeFiles/AdaptiveStochasticLBFGS.dir/itkAdaptiveStochasticLBFGSOptimizer.cxx.o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStandardStochasticGradientDescentOptimizer.cxx.o CMakeFiles/AdaptiveStochasticLBFGS.dir/__/StandardStochasticGradientDescent/itkStochasticGradientDescentOptimizer.cxx.o [ 71%] Linking CXX static library ../../../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/cmake -P CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/AdaptiveStochasticVarianceReducedGradient && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/elxAdaptiveStochasticVarianceReducedGradient.cxx.o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkAdaptiveStochasticVarianceReducedGradientOptimizer.cxx.o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStandardStochasticVarianceReducedGradientDescentOptimizer.cxx.o CMakeFiles/AdaptiveStochasticVarianceReducedGradient.dir/itkStochasticVarianceReducedGradientDescentOptimizer.cxx.o /usr/bin/ranlib ../../../bin/libAdaptiveStochasticVarianceReducedGradient-5.0.a /usr/bin/ranlib ../../../bin/libMovingRecursivePyramid-5.0.a /usr/bin/ranlib ../../../bin/libAdaptiveStochasticLBFGS-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 71%] Built target AdaptiveStochasticVarianceReducedGradient make -f Components/Optimizers/RegularStepGradientDescent/CMakeFiles/RegularStepGradientDescent.dir/build.make Components/Optimizers/RegularStepGradientDescent/CMakeFiles/RegularStepGradientDescent.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/RegularStepGradientDescent /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/RegularStepGradientDescent /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/RegularStepGradientDescent/CMakeFiles/RegularStepGradientDescent.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Optimizers/RegularStepGradientDescent/CMakeFiles/RegularStepGradientDescent.dir/build.make Components/Optimizers/RegularStepGradientDescent/CMakeFiles/RegularStepGradientDescent.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 71%] Building CXX object Components/Optimizers/RegularStepGradientDescent/CMakeFiles/RegularStepGradientDescent.dir/elxRegularStepGradientDescent.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/RegularStepGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/RegularStepGradientDescent/CMakeFiles/RegularStepGradientDescent.dir/elxRegularStepGradientDescent.cxx.o -MF CMakeFiles/RegularStepGradientDescent.dir/elxRegularStepGradientDescent.cxx.o.d -o CMakeFiles/RegularStepGradientDescent.dir/elxRegularStepGradientDescent.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/RegularStepGradientDescent/elxRegularStepGradientDescent.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 71%] Built target AdaptiveStochasticLBFGS [ 72%] Building CXX object Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o -MF CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o.d -o CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/PreconditionedStochasticGradientDescent/itkPreconditionedASGDOptimizer.cxx [ 72%] Building CXX object Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o -MF 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/elxStandardGradientDescent.cxx.o -MF CMakeFiles/StandardGradientDescent.dir/elxStandardGradientDescent.cxx.o.d -o CMakeFiles/StandardGradientDescent.dir/elxStandardGradientDescent.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/elxStandardGradientDescent.cxx [ 74%] Building CXX object Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/PreconditionedStochasticGradientDescent/CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o -MF 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/QuasiNewtonLBFGS/CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o -MF CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o.d -o CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/QuasiNewtonLBFGS/itkQuasiNewtonLBFGSOptimizer.cxx [ 75%] Building CXX object 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o -MF CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o.d -o CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx [ 75%] Linking CXX static library ../../../bin/libPowell-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/Powell && /usr/bin/cmake -P CMakeFiles/Powell.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/Powell && /usr/bin/cmake -E cmake_link_script 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-I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/FullSearch/CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o -MF CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o.d -o CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/FullSearch/itkFullSearchOptimizer.cxx [ 76%] Linking CXX static library ../../../bin/libQuasiNewtonLBFGS-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS && /usr/bin/cmake -P CMakeFiles/QuasiNewtonLBFGS.dir/cmake_clean_target.cmake [ 77%] Building CXX object Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/StandardGradientDescent && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Optimizers/StandardGradientDescent/CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o -MF CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o.d -o CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers/StandardGradientDescent/itkGradientDescentOptimizer2.cxx cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/QuasiNewtonLBFGS && /usr/bin/cmake -E cmake_link_script CMakeFiles/QuasiNewtonLBFGS.dir/link.txt --verbose=1 /usr/bin/ranlib ../../../bin/libPowell-5.0.a [ 78%] Linking CXX static library ../../../bin/libRegularStepGradientDescent-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/RegularStepGradientDescent && /usr/bin/cmake -P CMakeFiles/RegularStepGradientDescent.dir/cmake_clean_target.cmake /usr/bin/ar qc ../../../bin/libQuasiNewtonLBFGS-5.0.a CMakeFiles/QuasiNewtonLBFGS.dir/elxQuasiNewtonLBFGS.cxx.o CMakeFiles/QuasiNewtonLBFGS.dir/itkQuasiNewtonLBFGSOptimizer.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/RegularStepGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/RegularStepGradientDescent.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libRegularStepGradientDescent-5.0.a CMakeFiles/RegularStepGradientDescent.dir/elxRegularStepGradientDescent.cxx.o make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 78%] Built target Powell make -f Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/build.make Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations/MultiMetricMultiResolutionRegistration /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiMetricMultiResolutionRegistration /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/DependInfo.cmake --color= /usr/bin/ranlib ../../../bin/libRegularStepGradientDescent-5.0.a /usr/bin/ranlib ../../../bin/libQuasiNewtonLBFGS-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/build.make Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/build [ 79%] Linking CXX static library ../../../bin/libMovingSmoothingPyramid-5.0.a [ 79%] Linking CXX static library ../../../bin/libMovingGenericPyramid-5.0.a make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingGenericPyramid && /usr/bin/cmake -P CMakeFiles/MovingGenericPyramid.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingSmoothingPyramid && /usr/bin/cmake -P CMakeFiles/MovingSmoothingPyramid.dir/cmake_clean_target.cmake [ 79%] Building CXX object Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/elxMultiMetricMultiResolutionRegistration.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiMetricMultiResolutionRegistration && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Registrations/MultiMetricMultiResolutionRegistration/CMakeFiles/MultiMetricMultiResolutionRegistration.dir/elxMultiMetricMultiResolutionRegistration.cxx.o -MF CMakeFiles/MultiMetricMultiResolutionRegistration.dir/elxMultiMetricMultiResolutionRegistration.cxx.o.d -o CMakeFiles/MultiMetricMultiResolutionRegistration.dir/elxMultiMetricMultiResolutionRegistration.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations/MultiMetricMultiResolutionRegistration/elxMultiMetricMultiResolutionRegistration.cxx cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingGenericPyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/MovingGenericPyramid.dir/link.txt --verbose=1 cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/MovingImagePyramids/MovingSmoothingPyramid && /usr/bin/cmake -E cmake_link_script CMakeFiles/MovingSmoothingPyramid.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libMovingGenericPyramid-5.0.a CMakeFiles/MovingGenericPyramid.dir/elxMovingGenericPyramid.cxx.o make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' /usr/bin/ar qc ../../../bin/libMovingSmoothingPyramid-5.0.a CMakeFiles/MovingSmoothingPyramid.dir/elxMovingSmoothingPyramid.cxx.o make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 79%] Built target RegularStepGradientDescent [ 79%] Built target QuasiNewtonLBFGS make -f Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/build.make Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/depend make -f Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/build.make Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/depend make -f Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/build.make Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations/MultiResolutionRegistrationWithFeatures /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistrationWithFeatures /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/build.make Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 80%] Building CXX object Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/elxMultiResolutionRegistrationWithFeatures.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistrationWithFeatures && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Registrations/MultiResolutionRegistrationWithFeatures/CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/elxMultiResolutionRegistrationWithFeatures.cxx.o -MF CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/elxMultiResolutionRegistrationWithFeatures.cxx.o.d -o CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/elxMultiResolutionRegistrationWithFeatures.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations/MultiResolutionRegistrationWithFeatures/elxMultiResolutionRegistrationWithFeatures.cxx make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations/MultiResolutionRegistration /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistration /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators/BSplineResampleInterpolator /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/BSplineResampleInterpolator /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/build.make Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/build.make Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 81%] Building CXX object Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/elxMultiResolutionRegistration.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistration && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Registrations/MultiResolutionRegistration/CMakeFiles/MultiResolutionRegistration.dir/elxMultiResolutionRegistration.cxx.o -MF CMakeFiles/MultiResolutionRegistration.dir/elxMultiResolutionRegistration.cxx.o.d -o CMakeFiles/MultiResolutionRegistration.dir/elxMultiResolutionRegistration.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations/MultiResolutionRegistration/elxMultiResolutionRegistration.cxx [ 81%] Building CXX object Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/elxBSplineResampleInterpolator.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/BSplineResampleInterpolator && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ResampleInterpolators/BSplineResampleInterpolator/CMakeFiles/BSplineResampleInterpolator.dir/elxBSplineResampleInterpolator.cxx.o -MF CMakeFiles/BSplineResampleInterpolator.dir/elxBSplineResampleInterpolator.cxx.o.d -o CMakeFiles/BSplineResampleInterpolator.dir/elxBSplineResampleInterpolator.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators/BSplineResampleInterpolator/elxBSplineResampleInterpolator.cxx [ 81%] Linking CXX static library ../../../bin/libFullSearch-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch && /usr/bin/cmake -P CMakeFiles/FullSearch.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/FullSearch && /usr/bin/cmake -E cmake_link_script CMakeFiles/FullSearch.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libFullSearch-5.0.a CMakeFiles/FullSearch.dir/elxFullSearchOptimizer.cxx.o CMakeFiles/FullSearch.dir/itkFullSearchOptimizer.cxx.o [ 81%] Linking CXX static library ../../../bin/libTransformRigidityPenalty-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty && /usr/bin/cmake -P CMakeFiles/TransformRigidityPenalty.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Metrics/RigidityPenalty && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformRigidityPenalty.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libTransformRigidityPenalty-5.0.a CMakeFiles/TransformRigidityPenalty.dir/elxTransformRigidityPenaltyTerm.cxx.o /usr/bin/ranlib ../../../bin/libFullSearch-5.0.a /usr/bin/ranlib ../../../bin/libMovingSmoothingPyramid-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 81%] Built target FullSearch make -f Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/build.make Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/depend /usr/bin/ranlib ../../../bin/libMovingGenericPyramid-5.0.a make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators/RDBSplineResampleInterpolator /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/build.make Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 81%] Building CXX object Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxRDBSplineResampleInterpolator.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/ResampleInterpolators/RDBSplineResampleInterpolator/CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxRDBSplineResampleInterpolator.cxx.o -MF CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxRDBSplineResampleInterpolator.cxx.o.d -o CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxRDBSplineResampleInterpolator.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators/RDBSplineResampleInterpolator/elxRDBSplineResampleInterpolator.cxx [ 81%] Linking CXX static library ../../../bin/libStandardGradientDescent-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/StandardGradientDescent && /usr/bin/cmake -P CMakeFiles/StandardGradientDescent.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/StandardGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/StandardGradientDescent.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libStandardGradientDescent-5.0.a CMakeFiles/StandardGradientDescent.dir/elxStandardGradientDescent.cxx.o CMakeFiles/StandardGradientDescent.dir/itkStandardGradientDescentOptimizer.cxx.o CMakeFiles/StandardGradientDescent.dir/itkGradientDescentOptimizer2.cxx.o /usr/bin/ranlib ../../../bin/libStandardGradientDescent-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 81%] Built target StandardGradientDescent make -f Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/build.make Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers/MyStandardResampler /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Resamplers/MyStandardResampler /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/build.make Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 81%] Building CXX object Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/elxMyStandardResampler.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Resamplers/MyStandardResampler && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Resamplers/MyStandardResampler/CMakeFiles/MyStandardResampler.dir/elxMyStandardResampler.cxx.o -MF CMakeFiles/MyStandardResampler.dir/elxMyStandardResampler.cxx.o.d -o CMakeFiles/MyStandardResampler.dir/elxMyStandardResampler.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers/MyStandardResampler/elxMyStandardResampler.cxx /usr/bin/ranlib ../../../bin/libTransformRigidityPenalty-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 81%] Built target MovingSmoothingPyramid make -f Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/build.make Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/AdvancedAffineTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/build.make Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 82%] Building CXX object Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/AdvancedAffineTransform/CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o -MF CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o.d -o CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/AdvancedAffineTransform/elxAdvancedAffineTransform.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 82%] Built target MovingGenericPyramid make -f Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/build.make Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/AdvancedBSplineTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedBSplineTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/build.make Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 83%] Building CXX object Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/elxAdvancedBSplineTransform.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedBSplineTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/elxAdvancedBSplineTransform.cxx.o -MF CMakeFiles/AdvancedBSplineTransform.dir/elxAdvancedBSplineTransform.cxx.o.d -o CMakeFiles/AdvancedBSplineTransform.dir/elxAdvancedBSplineTransform.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/AdvancedBSplineTransform/elxAdvancedBSplineTransform.cxx make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 83%] Built target TransformRigidityPenalty make -f Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/build.make Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/AffineLogStackTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/build.make Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 84%] Building CXX object Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/elxAffineLogStackTransform.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/AffineLogStackTransform/CMakeFiles/AffineLogStackTransform.dir/elxAffineLogStackTransform.cxx.o -MF CMakeFiles/AffineLogStackTransform.dir/elxAffineLogStackTransform.cxx.o.d -o CMakeFiles/AffineLogStackTransform.dir/elxAffineLogStackTransform.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/AffineLogStackTransform/elxAffineLogStackTransform.cxx [ 85%] Linking CXX static library ../../../bin/libBSplineResampleInterpolator-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/BSplineResampleInterpolator && /usr/bin/cmake -P CMakeFiles/BSplineResampleInterpolator.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/BSplineResampleInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/BSplineResampleInterpolator.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libBSplineResampleInterpolator-5.0.a CMakeFiles/BSplineResampleInterpolator.dir/elxBSplineResampleInterpolator.cxx.o /usr/bin/ranlib ../../../bin/libBSplineResampleInterpolator-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 85%] Built target BSplineResampleInterpolator make -f Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/build.make Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/BSplineStackTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/BSplineStackTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/build.make Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 85%] Building CXX object Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/elxBSplineStackTransform.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/BSplineStackTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/BSplineStackTransform/CMakeFiles/BSplineStackTransform.dir/elxBSplineStackTransform.cxx.o -MF CMakeFiles/BSplineStackTransform.dir/elxBSplineStackTransform.cxx.o.d -o CMakeFiles/BSplineStackTransform.dir/elxBSplineStackTransform.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/BSplineStackTransform/elxBSplineStackTransform.cxx [ 86%] Linking CXX static library ../../../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator && /usr/bin/cmake -P CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/ResampleInterpolators/RDBSplineResampleInterpolator && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a CMakeFiles/ReducedDimensionBSplineResampleInterpolator.dir/elxRDBSplineResampleInterpolator.cxx.o /usr/bin/ranlib ../../../bin/libReducedDimensionBSplineResampleInterpolator-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 86%] Built target ReducedDimensionBSplineResampleInterpolator make -f Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/build.make Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/DeformationFieldTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/build.make Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 86%] Building CXX object Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/DeformationFieldTransform/CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o -MF CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o.d -o CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/DeformationFieldTransform/elxDeformationFieldTransform.cxx [ 86%] Linking CXX static library ../../../bin/libPreconditionedStochasticGradientDescent-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/cmake -P CMakeFiles/PreconditionedStochasticGradientDescent.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Optimizers/PreconditionedStochasticGradientDescent && /usr/bin/cmake -E cmake_link_script CMakeFiles/PreconditionedStochasticGradientDescent.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libPreconditionedStochasticGradientDescent-5.0.a CMakeFiles/PreconditionedStochasticGradientDescent.dir/elxPreconditionedStochasticGradientDescent.cxx.o CMakeFiles/PreconditionedStochasticGradientDescent.dir/itkPreconditionedASGDOptimizer.cxx.o CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkStandardGradientDescentOptimizer.cxx.o CMakeFiles/PreconditionedStochasticGradientDescent.dir/__/StandardGradientDescent/itkGradientDescentOptimizer2.cxx.o /usr/bin/ranlib ../../../bin/libPreconditionedStochasticGradientDescent-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 86%] Built target PreconditionedStochasticGradientDescent make -f Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/build.make Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/EulerStackTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerStackTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/build.make Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 87%] Building CXX object Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/elxEulerStackTransform.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerStackTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/EulerStackTransform/CMakeFiles/EulerStackTransform.dir/elxEulerStackTransform.cxx.o -MF CMakeFiles/EulerStackTransform.dir/elxEulerStackTransform.cxx.o.d -o CMakeFiles/EulerStackTransform.dir/elxEulerStackTransform.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/EulerStackTransform/elxEulerStackTransform.cxx [ 87%] Linking CXX static library ../../../bin/libMultiResolutionRegistration-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistration && /usr/bin/cmake -P CMakeFiles/MultiResolutionRegistration.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistration && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiResolutionRegistration.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libMultiResolutionRegistration-5.0.a CMakeFiles/MultiResolutionRegistration.dir/elxMultiResolutionRegistration.cxx.o /usr/bin/ranlib ../../../bin/libMultiResolutionRegistration-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 87%] Built target MultiResolutionRegistration make -f Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/build.make Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/depend make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/elastix-AqH1Bp/elastix-5.0.1 /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/EulerTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerTransform /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make -f Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/build.make Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/build make[3]: Entering directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 87%] Building CXX object Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/elxEulerTransform.cxx.o cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerTransform && /usr/bin/c++ -DELASTIX_USE_OPENMP -DITK_IO_FACTORY_REGISTER_MANAGER -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/build/elastix-AqH1Bp/elastix-5.0.1/Common -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/CostFunctions -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/LineSearchOptimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/ParameterFileParser -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/xout -I/build/elastix-AqH1Bp/elastix-5.0.1/Common/MevisDicomTiff -I/build/elastix-AqH1Bp/elastix-5.0.1/Core -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Install -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Kernel -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/ComponentBaseClasses -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Configuration -I/build/elastix-AqH1Bp/elastix-5.0.1/Core/Main -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/FixedImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ImageSamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Interpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Metrics -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/MovingImagePyramids -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Optimizers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Registrations -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/ResampleInterpolators -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Resamplers -I/build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms -I/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.2 -g -O2 -ffile-prefix-map=/build/elastix-AqH1Bp/elastix-5.0.1=. -fstack-protector-strong -Wformat -Werror=format-security -fvisibility=hidden -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -O3 -DNDEBUG -std=gnu++11 -MD -MT Components/Transforms/EulerTransform/CMakeFiles/EulerTransformElastix.dir/elxEulerTransform.cxx.o -MF CMakeFiles/EulerTransformElastix.dir/elxEulerTransform.cxx.o.d -o CMakeFiles/EulerTransformElastix.dir/elxEulerTransform.cxx.o -c /build/elastix-AqH1Bp/elastix-5.0.1/Components/Transforms/EulerTransform/elxEulerTransform.cxx c++: fatal error: Killed signal terminated program cc1plus compilation terminated. make[3]: *** [Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/build.make:79: Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/elxAdvancedBSplineTransform.cxx.o] Error 1 make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[2]: *** [CMakeFiles/Makefile2:4267: Components/Transforms/AdvancedBSplineTransform/CMakeFiles/AdvancedBSplineTransform.dir/all] Error 2 make[2]: *** Waiting for unfinished jobs.... [ 88%] Linking CXX static library ../../../bin/libMyStandardResampler-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Resamplers/MyStandardResampler && /usr/bin/cmake -P CMakeFiles/MyStandardResampler.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Resamplers/MyStandardResampler && /usr/bin/cmake -E cmake_link_script CMakeFiles/MyStandardResampler.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libMyStandardResampler-5.0.a CMakeFiles/MyStandardResampler.dir/elxMyStandardResampler.cxx.o /usr/bin/ranlib ../../../bin/libMyStandardResampler-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 88%] Built target MyStandardResampler [ 88%] Linking CXX static library ../../../bin/libMultiResolutionRegistrationWithFeatures-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistrationWithFeatures && /usr/bin/cmake -P CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiResolutionRegistrationWithFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libMultiResolutionRegistrationWithFeatures-5.0.a CMakeFiles/MultiResolutionRegistrationWithFeatures.dir/elxMultiResolutionRegistrationWithFeatures.cxx.o /usr/bin/ranlib ../../../bin/libMultiResolutionRegistrationWithFeatures-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 88%] Built target MultiResolutionRegistrationWithFeatures [ 88%] Linking CXX static library ../../../bin/libMultiMetricMultiResolutionRegistration-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiMetricMultiResolutionRegistration && /usr/bin/cmake -P CMakeFiles/MultiMetricMultiResolutionRegistration.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Registrations/MultiMetricMultiResolutionRegistration && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiMetricMultiResolutionRegistration.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libMultiMetricMultiResolutionRegistration-5.0.a CMakeFiles/MultiMetricMultiResolutionRegistration.dir/elxMultiMetricMultiResolutionRegistration.cxx.o /usr/bin/ranlib ../../../bin/libMultiMetricMultiResolutionRegistration-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 88%] Built target MultiMetricMultiResolutionRegistration [ 88%] Linking CXX static library ../../../bin/libAffineLogStackTransform-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform && /usr/bin/cmake -P CMakeFiles/AffineLogStackTransform.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AffineLogStackTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/AffineLogStackTransform.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libAffineLogStackTransform-5.0.a CMakeFiles/AffineLogStackTransform.dir/elxAffineLogStackTransform.cxx.o [ 88%] Linking CXX static library ../../../bin/libDeformationFieldTransform-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform && /usr/bin/cmake -P CMakeFiles/DeformationFieldTransform.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/DeformationFieldTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformationFieldTransform.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libDeformationFieldTransform-5.0.a CMakeFiles/DeformationFieldTransform.dir/elxDeformationFieldTransform.cxx.o [ 88%] Linking CXX static library ../../../bin/libAdvancedAffineTransformElastix-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform && /usr/bin/cmake -P CMakeFiles/AdvancedAffineTransformElastix.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/AdvancedAffineTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/AdvancedAffineTransformElastix.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libAdvancedAffineTransformElastix-5.0.a CMakeFiles/AdvancedAffineTransformElastix.dir/elxAdvancedAffineTransform.cxx.o /usr/bin/ranlib ../../../bin/libAffineLogStackTransform-5.0.a /usr/bin/ranlib ../../../bin/libDeformationFieldTransform-5.0.a /usr/bin/ranlib ../../../bin/libAdvancedAffineTransformElastix-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 88%] Built target DeformationFieldTransform [ 88%] Built target AffineLogStackTransform make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 88%] Built target AdvancedAffineTransformElastix [ 89%] Linking CXX static library ../../../bin/libBSplineStackTransform-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/BSplineStackTransform && /usr/bin/cmake -P CMakeFiles/BSplineStackTransform.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/BSplineStackTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/BSplineStackTransform.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libBSplineStackTransform-5.0.a CMakeFiles/BSplineStackTransform.dir/elxBSplineStackTransform.cxx.o /usr/bin/ranlib ../../../bin/libBSplineStackTransform-5.0.a [ 89%] Linking CXX static library ../../../bin/libEulerStackTransform-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerStackTransform && /usr/bin/cmake -P CMakeFiles/EulerStackTransform.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerStackTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/EulerStackTransform.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libEulerStackTransform-5.0.a CMakeFiles/EulerStackTransform.dir/elxEulerStackTransform.cxx.o [ 90%] Linking CXX static library ../../../bin/libEulerTransformElastix-5.0.a cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerTransform && /usr/bin/cmake -P CMakeFiles/EulerTransformElastix.dir/cmake_clean_target.cmake cd /build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu/Components/Transforms/EulerTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/EulerTransformElastix.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../bin/libEulerTransformElastix-5.0.a CMakeFiles/EulerTransformElastix.dir/elxEulerTransform.cxx.o make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 90%] Built target BSplineStackTransform /usr/bin/ranlib ../../../bin/libEulerStackTransform-5.0.a /usr/bin/ranlib ../../../bin/libEulerTransformElastix-5.0.a make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 90%] Built target EulerStackTransform make[3]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' [ 90%] Built target EulerTransformElastix make[2]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' make[1]: *** [Makefile:149: all] Error 2 make[1]: Leaving directory '/build/elastix-AqH1Bp/elastix-5.0.1/obj-x86_64-linux-gnu' dh_auto_build: error: cd obj-x86_64-linux-gnu && make -j10 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2 make: *** [debian/rules:11: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 E: run_chroot failed: E: command failed: chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/elastix-AqH1Bp/elastix-5.0.1 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1652341256" DEB_BUILD_OPTIONS=nocheck dpkg-buildpackage -uc -a amd64 --build=any" W: listening on child socket failed: I: removing tempdir /tmp/mmdebstrap.0iol5ihefy... E: mmdebstrap failed to run mmdebstrap failed