Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/c/cmtk/cmtk_3.3.1p1+dfsg-2+b1_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/cmtk-3.3.1p1+dfsg-2+b1ywjbik6m/cmtk_3.3.1p1+dfsg-2+b1_amd64.buildinfo Get source package info: cmtk=3.3.1p1+dfsg-2 Source URL: http://snapshot.notset.fr/mr/package/cmtk/3.3.1p1+dfsg-2/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-11.1 automake=1:1.16.2-4 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.48 bash=5.1~rc2-1 bc=1.07.1-2+b2 binutils=2.35.1-2 binutils-common=2.35.1-2 binutils-x86-64-linux-gnu=2.35.1-2 bsdextrautils=2.36-3+b2 bsdutils=1:2.36-3+b2 build-essential=12.8 bzip2=1.0.8-4 cmake=3.18.4-1 cmake-data=3.18.4-1 coreutils=8.32-4+b1 cpp=4:10.2.0-1 cpp-10=10.2.0-16 dash=0.5.10.2-7 dc=1.07.1-2+b2 debconf=1.5.74 debhelper=13.2.1 debianutils=4.11.2 dh-autoreconf=19 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13-5 file=1:5.38-5 findutils=4.7.0+git20201010-2 g++=4:10.2.0-1 g++-10=10.2.0-16 gcc=4:10.2.0-1 gcc-10=10.2.0-16 gcc-10-base=10.2.0-16 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 grep=3.6-1 groff-base=1.22.4-5 gzip=1.10-2 hostname=3.23 icu-devtools=67.1-4 init-system-helpers=1.58 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libarchive13=3.4.3-2 libasan6=10.2.0-16 libatomic1=10.2.0-16 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3.1 libaudit1=1:2.8.5-3.1 libbinutils=2.35.1-2 libblkid1=2.36-3+b2 libbrotli1=1.0.9-2+b1 libbsd0=0.10.0-1 libbz2-1.0=1.0.8-4 libbz2-dev=1.0.8-4 libc-bin=2.31-4 libc-dev-bin=2.31-4 libc6=2.31-4 libc6-dev=2.31-4 libcap-ng0=0.7.9-2.2 libcc1-0=10.2.0-16 libcharls-dev=2.1.0+dfsg-8 libcharls2=2.1.0+dfsg-8 libcom-err2=1.45.6-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.1-2 libctf0=2.35.1-2 libcurl4=7.72.0-1 libdb5.3=5.3.28+dfsg1-0.6 libdcmtk-dev=3.6.5-1 libdcmtk15=3.6.5-1 libdebconfclient0=0.255 libdebhelper-perl=13.2.1 libdpkg-perl=1.20.5 libdrm-amdgpu1=2.4.103-1 libdrm-common=2.4.103-1 libdrm-intel1=2.4.103-1 libdrm-nouveau2=2.4.103-1 libdrm-radeon1=2.4.103-1 libdrm2=2.4.103-1 libedit2=3.1-20191231-1 libelf1=0.182-1 libexpat1=2.2.10-1 libffi7=3.3-4 libfftw3-bin=3.3.8-2 libfftw3-dev=3.3.8-2 libfftw3-double3=3.3.8-2 libfftw3-long3=3.3.8-2 libfftw3-quad3=3.3.8-2 libfftw3-single3=3.3.8-2 libfile-stripnondeterminism-perl=1.9.0-1 libfontenc1=1:1.1.4-1 libfreetype6=2.10.2+dfsg-4 libgcc-10-dev=10.2.0-16 libgcc-s1=10.2.0-16 libgcrypt20=1.8.7-2 libgdbm-compat4=1.18.1-5.1 libgdbm6=1.18.1-5.1 libgl1=1.3.2-1 libgl1-mesa-dri=20.2.2-1 libglapi-mesa=20.2.2-1 libglib2.0-0=2.66.2-1 libglvnd0=1.3.2-1 libglx-mesa0=20.2.2-1 libglx0=1.3.2-1 libgmp10=2:6.2.0+dfsg-6 libgnutls30=3.6.15-4 libgomp1=10.2.0-16 libgpg-error0=1.38-2 libgssapi-krb5-2=1.17-10 libhogweed6=3.6-2 libice6=2:1.0.10-1 libicu-dev=67.1-4 libicu67=67.1-4 libidn2-0=2.3.0-3 libisl22=0.22.1-1 libitm1=10.2.0-16 libjbig-dev=2.1-3.1+b2 libjbig0=2.1-3.1+b2 libjpeg-dev=1:2.0.5-1.1 libjpeg62-turbo=1:2.0.5-1.1 libjpeg62-turbo-dev=1:2.0.5-1.1 libjsoncpp1=1.7.4-3.1 libk5crypto3=1.17-10 libkeyutils1=1.6.1-2 libkrb5-3=1.17-10 libkrb5support0=1.17-10 libldap-2.4-2=2.4.56+dfsg-1 libllvm11=1:11.0.0-5 liblsan0=10.2.0-16 liblz4-1=1.9.2-2 liblzma-dev=5.2.4-1+b1 liblzma5=5.2.4-1+b1 libmagic-mgc=1:5.38-5 libmagic1=1:5.38-5 libmount1=2.36-3+b2 libmpc3=1.2.0-1 libmpfr6=4.1.0-3 libmxml-dev=3.2-1 libmxml1=3.2-1 libncurses6=6.2+20200918-1 libncursesw6=6.2+20200918-1 libnettle8=3.6-2 libnghttp2-14=1.41.0-3 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libnss-nis=3.1-4 libnss-nisplus=1.3-4 libp11-kit0=0.23.21-2 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpciaccess0=0.16-1 libpcre2-8-0=10.34-7 libpcre3=2:8.39-13 libperl5.32=5.32.0-4 libpipeline1=1.5.3-1 libpixman-1-0=0.36.0-1 libpng-dev=1.6.37-3 libpng16-16=1.6.37-3 libprocps8=2:3.3.16-5 libpsl5=0.21.0-1.1 libquadmath0=10.2.0-16 libreadline8=8.1~rc2-2 librhash0=1.4.0-1 librtmp1=2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2=2.1.27+dfsg-2 libsasl2-modules-db=2.1.27+dfsg-2 libseccomp2=2.5.0-3 libselinux1=3.1-2+b1 libsensors-config=1:3.6.0-2 libsensors5=1:3.6.0-2 libsigsegv2=2.12-2 libsm6=2:1.2.3-1 libsmartcols1=2.36-3+b2 libsqlite3-0=3.33.0-1 libsqlite3-dev=3.33.0-1 libssh2-1=1.8.0-2.1 libssl-dev=1.1.1h-1 libssl1.1=1.1.1h-1 libstdc++-10-dev=10.2.0-16 libstdc++6=10.2.0-16 libsub-override-perl=0.09-2 libsystemd0=246.6-2 libtasn1-6=4.16.0-2 libtiff-dev=4.1.0+git191117-2 libtiff5=4.1.0+git191117-2 libtiffxx5=4.1.0+git191117-2 libtinfo6=6.2+20200918-1 libtirpc-common=1.2.6-3 libtirpc-dev=1.2.6-3 libtirpc3=1.2.6-3 libtool=2.4.6-14 libtsan0=10.2.0-16 libubsan1=10.2.0-16 libuchardet0=0.0.7-1 libudev1=246.6-2 libunistring2=0.9.10-4 libunwind8=1.3.2-2 libuuid1=2.36-3+b2 libuv1=1.40.0-1 libvulkan1=1.2.154.1-1 libwebp6=0.6.1-2+b1 libwrap0=7.6.q-31 libwrap0-dev=7.6.q-31 libx11-6=2:1.6.12-1 libx11-data=2:1.6.12-1 libx11-xcb1=2:1.6.12-1 libxau6=1:1.0.8-1+b2 libxaw7=2:1.0.13-1+b2 libxcb-dri2-0=1.14-2 libxcb-dri3-0=1.14-2 libxcb-glx0=1.14-2 libxcb-present0=1.14-2 libxcb-sync1=1.14-2 libxcb-xfixes0=1.14-2 libxcb1=1.14-2 libxdamage1=1:1.1.5-2 libxdmcp6=1:1.1.2-3 libxext6=2:1.3.3-1+b2 libxfixes3=1:5.0.3-2 libxfont2=1:2.0.4-1 libxkbfile1=1:1.1.0-1 libxml2=2.9.10+dfsg-6.2 libxml2-dev=2.9.10+dfsg-6.2 libxmu6=2:1.1.2-2+b3 libxmuu1=2:1.1.2-2+b3 libxpm4=1:3.5.12-1 libxshmfence1=1.3-1 libxt6=1:1.2.0-1 libxxf86vm1=1:1.1.4-1+b2 libz3-4=4.8.9-1 libzstd1=1.4.5+dfsg-4 linux-libc-dev=5.9.6-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 ncurses-base=6.2+20200918-1 ncurses-bin=6.2+20200918-1 patch=2.7.6-6 perl=5.32.0-4 perl-base=5.32.0-4 perl-modules-5.32=5.32.0-4 po-debconf=1.0.21 procps=2:3.3.16-5 readline-common=8.1~rc2-2 sed=4.7-1 sensible-utils=0.0.12+nmu1 sysvinit-utils=2.96-5 tar=1.30+dfsg-7 util-linux=2.36-3+b2 x11-common=1:7.7+21 x11-xkb-utils=7.7+5 xauth=1:1.0.10-1 xkb-data=2.29-2 xserver-common=2:1.20.9-2 xvfb=2:1.20.9-2 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210123T144741Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20201111T205648Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d cmtk=3.3.1p1+dfsg-2 && mkdir -p /build/cmtk-IKrXTh && dpkg-source --no-check -x /*.dsc /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg && cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg && { printf '%s' 'cmtk (3.3.1p1+dfsg-2+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against libdcmtk15 -- all / amd64 / i386 Build Daemon (x86-conova-01) Fri, 13 Nov 2020 04:36:00 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/cmtk-IKrXTh" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1605242160" dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/cmtk-IKrXTh /tmp/cmtk-3.3.1p1+dfsg-2+b1ywjbik6m bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20201111T205648Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.TjXv6FJ5Wd as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.TjXv6FJ5Wd Reading package lists... Building dependency tree... util-linux is already the newest version (2.36-3+b2). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20201111T205648Z unstable/main amd64 libfakeroot amd64 1.25.3-1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20201111T205648Z unstable/main amd64 fakeroot amd64 1.25.3-1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (908 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4694 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1_amd64.deb ... Unpacking fakeroot (1.25.3-1) ... Setting up libfakeroot:amd64 (1.25.3-1) ... Setting up fakeroot (1.25.3-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-4) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210123T144741Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20201111T205648Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.TjXv6FJ5Wd Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Get:2 http://snapshot.notset.fr/archive/debian/20210123T144741Z unstable InRelease [153 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20201111T205648Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20210123T144741Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20210123T144741Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20210123T144741Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20210123T144741Z unstable/main amd64 Packages [11.7 MB] Fetched 34.4 MB in 29s (1205 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.TjXv6FJ5Wd I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d cmtk=3.3.1p1+dfsg-2 && mkdir -p /build/cmtk-IKrXTh && dpkg-source --no-check -x /*.dsc /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg && cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg && { printf '%s' 'cmtk (3.3.1p1+dfsg-2+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for amd64; no source changes. * Rebuild against libdcmtk15 -- all / amd64 / i386 Build Daemon (x86-conova-01) Fri, 13 Nov 2020 04:36:00 +0000 '; cat debian/changelog; } > debian/changelog.debrebuild && mv debian/changelog.debrebuild debian/changelog && chown -R builduser:builduser /build/cmtk-IKrXTh"' exec /tmp/mmdebstrap.TjXv6FJ5Wd Reading package lists... NOTICE: 'cmtk' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/neurodebian-team/cmtk.git Please use: git clone https://salsa.debian.org/neurodebian-team/cmtk.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1067 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main cmtk 3.3.1p1+dfsg-2 (dsc) [2255 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main cmtk 3.3.1p1+dfsg-2 (tar) [1055 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main cmtk 3.3.1p1+dfsg-2 (diff) [9788 B] Fetched 1067 kB in 1s (1028 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'cmtk_3.3.1p1+dfsg-2.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting cmtk in /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg dpkg-source: info: unpacking cmtk_3.3.1p1+dfsg.orig.tar.xz dpkg-source: info: unpacking cmtk_3.3.1p1+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying up_assure_no_as_needed_for_checklibdep dpkg-source: info: applying reproducible_build dpkg-source: info: applying fix_cmake_version_comparison dpkg-source: info: applying dcmtk-3.6.1-compatibility I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1605242160" dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.TjXv6FJ5Wd dpkg-buildpackage: info: source package cmtk dpkg-buildpackage: info: source version 3.3.1p1+dfsg-2+b1 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by all / amd64 / i386 Build Daemon (x86-conova-01) dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" debian/rules override_dh_auto_clean make[1]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg' dh_auto_clean rm -rf debian/manpages make[1]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/cmtk.substvars debian/files rm -fr -- debian/cmtk/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg' dh_auto_configure -- \ -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ -DBUILD_APPS:BOOL=ON \ -DBUILD_DOCUMENTATION:BOOL=OFF \ -DBUILD_GUI:BOOL=OFF \ -DBUILD_SHARED_LIBS:BOOL=ON \ -DBUILD_TESTING:BOOL=OFF \ -DCMTK_BUILD_DCMTK:BOOL=OFF \ -DCMTK_BUILD_MXML:BOOL=OFF \ -DCMTK_BUILD_NRRD:BOOL=ON \ -DCMTK_BUILD_SQLITE:BOOL=OFF \ -DCMTK_BUILD_ZLIB:BOOL=OFF \ -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas \ -DCMTK_USE_DCMTK:BOOL=ON \ -DCMTK_USE_FFTW:BOOL=ON \ -DCMTK_USE_QT:BOOL=OFF \ -DCMTK_USE_SMP:BOOL=ON \ -DCMTK_USE_SQLITE:BOOL=ON \ -DDART_TESTING_TIMEOUT:STRING=15000 \ -DMXML_INCLUDE_DIR:PATH=/usr/include \ -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma \ -DCMAKE_SKIP_RPATH:BOOL=OFF \ -DCMTK_BUILD_WRAPPER:BOOL=ON \ install -d obj-x86_64-linux-gnu cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DBUILD_APPS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF -DCMTK_BUILD_ZLIB:BOOL=OFF -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=OFF -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF -DCMTK_BUILD_WRAPPER:BOOL=ON .. -- The C compiler identification is GNU 10.2.0 -- The CXX compiler identification is GNU 10.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of void* -- Check size of void* - done -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Looking for limits.h -- Looking for limits.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for include files sys/types.h, sys/prctl.h -- Looking for include files sys/types.h, sys/prctl.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Check size of unsigned short -- Check size of unsigned short - done -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Could NOT find X11 (missing: X11_X11_INCLUDE_PATH X11_X11_LIB) -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Looking for C++ include iostream -- Looking for C++ include iostream - found -- Check for STD namespace -- Check for STD namespace - found -- Check for ANSI scope -- Check for ANSI scope - found -- Check for sstream -- Check for sstream - found -- System is Linux-5.10.0-8-amd64 -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file execinfo.h -- Looking for include file execinfo.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Looking for include file termios.h -- Looking for include file termios.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file sys/ioctl.h -- Looking for include file sys/ioctl.h - found -- Looking for include file sys/procfs.h -- Looking for include file sys/procfs.h - found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file sys/times.h -- Looking for include file sys/times.h - found -- Looking for include file sys/utsname.h -- Looking for include file sys/utsname.h - found -- Check size of ((struct stat*)0)->st_mode -- Check size of ((struct stat*)0)->st_mode - done -- Check size of struct stat64 -- Check size of struct stat64 - failed -- Check if the system is big endian -- Searching 16 bit integer -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Check the value of the 22nd bit of a 32-bit quiet-NaN -- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1 -- Looking for C++ include unordered_map -- Looking for C++ include unordered_map - found -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Looking for include file dispatch/dispatch.h -- Looking for include file dispatch/dispatch.h - not found -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE - Success -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Using system zlib -- Building bundled mxml due to outdated or broken system mxml (minimum version required is 2.7, version 2.8 is broken; installed version is 0.0) -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found system libbz2 -- Could NOT find LZMA (missing: LZMA_LIBRARIES LZMA_INCLUDE_DIRS) -- Found DCMTK: /usr/include/dcmtk/config -- - tested library png -- - tested library tiff -- - tested library CharLS -- Using system DCMTK library. -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) -- Found SQLite3: /usr/lib/x86_64-linux-gnu/libsqlite3.so -- Using system sqlite3 library -- Check size of long long -- Check size of long long - done -- Looking for strdup -- Looking for strdup - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for vsnprintf -- Looking for vsnprintf - found CMake Warning (dev) at CMakeLists.txt:698 (EXPORT_LIBRARY_DEPENDENCIES): Policy CMP0033 is not set: The export_library_dependencies command should not be called. Run "cmake --help-policy CMP0033" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: BUILD_DOCUMENTATION CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR DART_TESTING_TIMEOUT -- Build files have been written to: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg' dh_auto_build -a cd obj-x86_64-linux-gnu && make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg -B/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkMxml make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target NrrdIO make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-attr.c [ 0%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/comment.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/comment.c [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-entity.c Scanning dependencies of target cmtkNumerics make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 2%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ap.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/ap.cxx [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enumsNrrd.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enumsNrrd.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/mop.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/mop.c [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-index.c.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-index.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/string.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/string.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/754.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/754.c [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-private.c.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-private.c [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/defaultsNrrd.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/defaultsNrrd.c [ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-get.c.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-get.c [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseAir.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseAir.c [ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-set.c.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-set.c [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/dio.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/dio.c [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/format.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/format.c [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseNrrd.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseNrrd.c [ 4%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-file.c.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-file.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatEPS.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatEPS.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encoding.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encoding.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatNRRD.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatNRRD.c [ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/bdsvd.cxx [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingAscii.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingAscii.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNG.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNG.c [ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/bidiagonal.cxx [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingBzip2.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingBzip2.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNM.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNM.c [ 6%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-node.c.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-node.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/accessors.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/accessors.c [ 6%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-search.c.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-search.c [ 6%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-string.c [ 6%] Linking C shared library ../../bin/libcmtkMxml.so cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so CMakeFiles/cmtkMxml.dir/mxml-attr.c.o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o CMakeFiles/cmtkMxml.dir/mxml-index.c.o CMakeFiles/cmtkMxml.dir/mxml-private.c.o CMakeFiles/cmtkMxml.dir/mxml-get.c.o CMakeFiles/cmtkMxml.dir/mxml-set.c.o CMakeFiles/cmtkMxml.dir/mxml-file.c.o CMakeFiles/cmtkMxml.dir/mxml-node.c.o CMakeFiles/cmtkMxml.dir/mxml-search.c.o CMakeFiles/cmtkMxml.dir/mxml-string.c.o make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 6%] Built target cmtkMxml make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkSystem make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 6%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingGzip.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingGzip.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatText.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatText.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/array.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/array.c [ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/blas.cxx [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingHex.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingHex.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatVTK.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatVTK.c In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/read.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/read.c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:123:58: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 123 | CommandLine::Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ) | ^~~~~ [ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/cholesky.cxx [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/arraysNrrd.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/arraysNrrd.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingRaw.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingRaw.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/gzio.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/gzio.c [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/det.cxx [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/gammaf.cxx [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/reorder.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/reorder.c [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/hessenberg.cxx [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/write.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/write.c [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/hsschur.cxx [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/axis.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/axis.c [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/ibetaf.cxx [ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/lbfgsb.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianAir.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianAir.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/keyvalue.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/keyvalue.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffbiff.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffbiff.c [ 11%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffmsg.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffmsg.c [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/lq.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianNrrd.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianNrrd.c [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/methodsNrrd.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/methodsNrrd.c In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/lu.cxx [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/sane.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/sane.c [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enum.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enum.c [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/miscAir.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/miscAir.c [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/simple.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/simple.c [ 13%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx [ 14%] Linking C shared library ../../bin/libNrrdIO.so cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 14%] Built target NrrdIO [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/normaldistr.cxx [ 14%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/nsevd.cxx [ 14%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/qr.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/reflections.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/rotations.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx:31: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/sblas.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx:31: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx [ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/sevd.cxx [ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/spddet.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx:34: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:61:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 61 | StdOut << ".TH " << cmd << " \"1\" \"" << __DATE__ << "\" \"CMTK " << ppit->second << "\" \"The Computational Morphometry Toolkit\"\n"; | ^~~~~~~~ [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/studenttdistr.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/studentttests.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:34: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/svd.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx:34: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx:34: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/tdevd.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStream.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamFile.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamPipe.cxx [ 18%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/tridiagonal.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamReaderBase.cxx [ 19%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics/mersenne.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamZlib.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkConsole.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx [ 20%] Linking CXX shared library ../../bin/libcmtkNumerics.so cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkNumerics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkNumerics.so -o ../../bin/libcmtkNumerics.so CMakeFiles/cmtkNumerics.dir/ap.cxx.o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/blas.cxx.o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o CMakeFiles/cmtkNumerics.dir/det.cxx.o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o CMakeFiles/cmtkNumerics.dir/lq.cxx.o CMakeFiles/cmtkNumerics.dir/lu.cxx.o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o CMakeFiles/cmtkNumerics.dir/qr.cxx.o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o CMakeFiles/cmtkNumerics.dir/svd.cxx.o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,::::::::::::: [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkMemory.cxx make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 20%] Built target cmtkNumerics [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkMountPoints.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgress.cxx /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx: In function ‘std::string cmtk::FileUtils::GetAbsolutePath(const string&)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx:147:11: warning: ignoring return value of ‘char* getcwd(char*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 147 | getcwd( absPath, PATH_MAX ); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~ [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkRegressionTracker.cxx cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgressConsole.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkStackBacktrace.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkStrUtility.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreads.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreadPoolThreads.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreadSemaphore.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkTimers.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamBZip2.cxx [ 22%] Linking CXX shared library ../../bin/libcmtkSystem.so cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSystem.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSystem.so -o ../../bin/libcmtkSystem.so CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 22%] Built target cmtkSystem make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkBase make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXform.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveShapeModel.cxx cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveDeformationModel.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXformUniformVolume.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientation.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationBase.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkBitVector.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid_Crop.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridConnectedComponents.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridLocalCorrelation.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridMorphologicalOperators.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDeformationField.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDeformationField_Jacobian.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDirectionSet.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFilterVolume.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS 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/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToWarpXform.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 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-fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitPolynomialToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitRigidToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToDeformationField.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToXformList.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitToXformListBase.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkGeneralLinearModel.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHistogram.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHypothesisTests.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperation.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropRegion.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDistanceMap.cxx /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx: In member function ‘virtual cmtk::UniformVolume::SmartPtr cmtk::ImageOperationCropThreshold::Apply(cmtk::UniformVolume::SmartPtr&)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:24: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:27: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:30: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:33: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:36: warning: format ‘%d’ expects argument of type ‘int’, but argument 6 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:39: warning: format ‘%d’ expects argument of type ‘int’, but argument 7 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationMapValues.cxx /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx: In static member function ‘static void cmtk::ImageOperationDownsample::NewGeneric(bool, const char*)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:43: warning: format ‘%d’ expects argument of type ‘int*’, but argument 3 has type ‘cmtk::Types::GridIndexType*’ {aka ‘long long int*’} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:47: warning: format ‘%d’ expects argument of type ‘int*’, but argument 4 has type ‘cmtk::Types::GridIndexType*’ {aka ‘long long int*’} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:51: warning: format ‘%d’ expects argument of type ‘int*’, but argument 5 has type ‘cmtk::Types::GridIndexType*’ {aka ‘long long int*’} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx:34: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRegionFilter.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationResampleIsotropic.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationThreshold.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationOtsuThreshold.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationPruneHistogram.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRevert.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogram.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogramBase.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmark.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml 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[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051_GetPhantomImage.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO 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-I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_LinAlg.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Random.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Statistics.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS 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-DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix4x4.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMetaInformationObject.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkParametricPlane.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkPolynomialXform.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImage.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImageGradientField.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSegmentationLabel.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS 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/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Jacobian.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Rigidity.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXformUniformVolume.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformChangeToSpaceAffine.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformChangeFromSpaceAffine.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformedVolumeAxes.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray_Statistics.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramMatching.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramEqualization.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformDistanceMap.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Crop.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Differential.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Resample.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Space.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeGaussianFilter.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeLaplaceFilter.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeInterpolatorBase.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeInterpolatorPartialVolume.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeMorphologicalOperators.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumePainter.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolumeClipping.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolume.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolumeGridToGridLookup.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkWarpXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform_Inverse.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformList.cxx [ 42%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformListEntry.cxx [ 42%] Linking CXX shared library ../../bin/libcmtkBase.so cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkBase.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkBase.so -o ../../bin/libcmtkBase.so CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o 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CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 42%] Built target cmtkBase make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkIO make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSplineWarpXformITKIO.cxx [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkAffineXformITKIO.cxx cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamAffineXform.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamParametricPlane.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamPolynomialXform.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamStudyList.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamWarpXform.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileFormat.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkGroupwiseRegistrationFunctionalIO.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationApplyMask.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationMatchIntensities.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function ‘void cmtk::ImageFileDICOM::ReleaseDocument()’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx: In constructor ‘cmtk::ImageFileDICOM::ImageFileDICOM(const string&)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:155:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 155 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:164:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 164 | this->m_Dataset = std::auto_ptr( fileformat->getAndRemoveDataset() ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:170:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 170 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset.get(), this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkIO.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function ‘void cmtk::ImageFileDICOM::ReleaseDocument()’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkListIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkPhantomIO_MagphanEMR051.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSegmentationLabelIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSiemensCSAHeader.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudy.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudyList.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStream.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamInput.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamStudylist.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFile.cxx /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx: In member function ‘cmtk::TypedStream::Condition cmtk::TypedStreamOutput::WriteIntArray(const char*, const long long int*, int, int)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx:564:25: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘long long int’ [-Wformat=] 564 | fprintf( File, "%ld ", array[i] ); | ~~^ ~~~~~~~~ | | | | long int long long int | %lld [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileAnalyze.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileBioRad.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNRRD.cxx /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx: In static member function ‘static void cmtk::VolumeFromFile::WriteMetaImage(const string&, const cmtk::UniformVolume&)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:33: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:36: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:39: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNifti.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx: In static member function ‘static const SmartPtr cmtk::VolumeFromFile::ReadVanderbilt(const string&)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx:58:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 58 | fgets( line, 96, fp ); | ~~~~~^~~~~~~~~~~~~~~~ [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromSlices.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeIO.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIO.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformListIO.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONifti.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONrrd.cxx [ 49%] Building C object libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/nifti1_io_math.c [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx: In member function ‘void cmtk::DICOM::InitFromFile(const string&)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:112:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 112 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:133:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 133 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset, this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSQLite.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 50%] Linking CXX shared library ../../bin/libcmtkIO.so cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkIO.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkIO.so -o ../../bin/libcmtkIO.so CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads -lz make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 50%] Built target cmtkIO make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkRegistration make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestNeighbourOptimizer.cxx [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestDirectionOptimizer.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkCongealingFunctional.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkEchoPlanarUnwarpFunctional.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalBase.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationOutput.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationRMIFunctional.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkHausdorffDistance.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityJointHistogram.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasure.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureCR.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureMSD.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureNCC.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureRMS.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctional.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctionalBase.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkMakeInitialAffineTransformation.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkMultiChannelRegistrationFunctionalBase.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkProtocolCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkReformatVolume.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkRegistrationCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkRegistrationJointHistogram.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctional.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSymmetricElasticFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSymmetryPlaneFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarity.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarityMemory.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarityRMI.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingCorrRatio.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingCrossCorrelation.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingElasticFunctional.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMeanSquaredDifference.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric_Type.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageXformDB.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 63%] Linking CXX shared library ../../bin/libcmtkRegistration.so cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRegistration.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRegistration.so -o ../../bin/libcmtkRegistration.so CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Built target cmtkRegistration make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Recon /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color= make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkRecon make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx Scanning dependencies of target cmtkSegmentation make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o [ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx [ 64%] Linking CXX shared library ../../bin/libcmtkRecon.so cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRecon.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRecon.so -o ../../bin/libcmtkRecon.so CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkRegistration.so ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 64%] Built target cmtkRecon [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationSTAPLE.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationVoting.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveraging.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkOverlapMeasures.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelset.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx [ 67%] Linking CXX shared library ../../bin/libcmtkSegmentation.so cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSegmentation.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSegmentation.so -o ../../bin/libcmtkSegmentation.so CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkRegistration.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkMxml.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 67%] Built target cmtkSegmentation make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= Scanning dependencies of target dcm2image Scanning dependencies of target detect_spheres_matched_filter make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target mcwarp make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build Scanning dependencies of target detect_adni_phantom make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 67%] Building CXX object apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dcm2image.dir/dcm2image.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 67%] Building CXX object apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o [ 67%] Building CXX object apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcwarp.dir/mcwarp.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx [ 68%] Building CXX object apps/CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:39: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function ‘void cmtk::ImageFileDICOM::ReleaseDocument()’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 68%] Linking CXX executable ../bin/detect_spheres_matched_filter cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_spheres_matched_filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -o ../bin/detect_spheres_matched_filter -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target detect_spheres_matched_filter make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color= Scanning dependencies of target asegment_sri24 make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 68%] Linking CXX executable ../bin/detect_adni_phantom cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_adni_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -o ../bin/detect_adni_phantom -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target detect_adni_phantom make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= Scanning dependencies of target xform2scalar make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object apps/CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 68%] Linking CXX executable ../bin/asegment_sri24 cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment_sri24.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -o ../bin/asegment_sri24 -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target asegment_sri24 make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= Scanning dependencies of target xform2itk make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2itk.dir/xform2itk.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx [ 68%] Linking CXX executable ../bin/dcm2image cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2image.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dcm2image.dir/dcm2image.cxx.o -o ../bin/dcm2image -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target dcm2image make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color= Scanning dependencies of target xform2dfield make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 69%] Building CXX object apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx:38: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 70%] Linking CXX executable ../bin/xform2scalar cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2scalar.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -o ../bin/xform2scalar -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target xform2scalar make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= Scanning dependencies of target warp2ps make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp2ps.dir/warp2ps.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 70%] Linking CXX executable ../bin/xform2itk cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2itk.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2itk.dir/xform2itk.cxx.o -o ../bin/xform2itk -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target xform2itk make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= Scanning dependencies of target warp make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object apps/CMakeFiles/warp.dir/warp.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp.dir/warp.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/warp.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/warp.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 70%] Linking CXX executable ../bin/xform2dfield cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -o ../bin/xform2dfield -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target xform2dfield make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= Scanning dependencies of target vtkxform make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vtkxform.dir/vtkxform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx [ 71%] Linking CXX executable ../bin/warp cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp.dir/warp.cxx.o -o ../bin/warp -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 71%] Built target warp make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= Scanning dependencies of target volume_reconstruction make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx: In function ‘int doMain(int, const char**)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of ‘xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](0)’ from ‘double’ to ‘float’ [-Wnarrowing] 190 | float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; | ^ /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of ‘xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](1)’ from ‘double’ to ‘float’ [-Wnarrowing] /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of ‘xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](2)’ from ‘double’ to ‘float’ [-Wnarrowing] In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 72%] Linking CXX executable ../bin/warp2ps cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp2ps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp2ps.dir/warp2ps.cxx.o -o ../bin/warp2ps -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target warp2ps make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= Scanning dependencies of target unwarp_image_phantom make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 72%] Linking CXX executable ../bin/mcwarp cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcwarp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcwarp.dir/mcwarp.cxx.o -o ../bin/mcwarp -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 72%] Linking CXX executable ../bin/vtkxform cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vtkxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vtkxform.dir/vtkxform.cxx.o -o ../bin/vtkxform -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target vtkxform make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target mcwarp make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color= Scanning dependencies of target unsplit make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/unsplit.dir/unsplit.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unsplit.dir/unsplit.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx Scanning dependencies of target ttest make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/ttest.dir/ttest.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/ttest.dir/ttest.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/ttest.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/ttest.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 74%] Linking CXX executable ../bin/unwarp_image_phantom cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unwarp_image_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -o ../bin/unwarp_image_phantom -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target unwarp_image_phantom make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= Scanning dependencies of target symplx make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/symplx.dir/symplx.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/symplx.dir/symplx.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/symplx.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/symplx.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 74%] Linking CXX executable ../bin/symplx cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/symplx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/symplx.dir/symplx.cxx.o -o ../bin/symplx -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target symplx make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color= Scanning dependencies of target sympl make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/sympl.dir/sympl.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sympl.dir/sympl.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/sympl.cxx [ 74%] Linking CXX executable ../bin/unsplit cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unsplit.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unsplit.dir/unsplit.cxx.o -o ../bin/unsplit -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target unsplit make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= Scanning dependencies of target streamxform make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/streamxform.dir/streamxform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/streamxform.dir/streamxform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/sympl.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 74%] Linking CXX executable ../bin/ttest cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/ttest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/ttest.dir/ttest.cxx.o -o ../bin/ttest -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target ttest make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= Scanning dependencies of target gmm make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/gmm.dir/gmm.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gmm.dir/gmm.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/gmm.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/gmm.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 74%] Linking CXX executable ../bin/volume_reconstruction cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_reconstruction.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -o ../bin/volume_reconstruction -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target volume_reconstruction make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color= Scanning dependencies of target jidb make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/jidb.dir/jidb.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/jidb.dir/jidb.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/jidb.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/jidb.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 75%] Linking CXX executable ../bin/streamxform cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/streamxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/streamxform.dir/streamxform.cxx.o -o ../bin/streamxform -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 75%] Built target streamxform make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= Scanning dependencies of target geomatch make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 76%] Building CXX object apps/CMakeFiles/geomatch.dir/geomatch.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/geomatch.dir/geomatch.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 77%] Linking CXX executable ../bin/gmm cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gmm.dir/gmm.cxx.o -o ../bin/gmm -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target gmm make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color= Scanning dependencies of target dbtool make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/dbtool.dir/dbtool.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dbtool.dir/dbtool.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 78%] Linking CXX executable ../bin/sympl cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sympl.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sympl.dir/sympl.cxx.o -o ../bin/sympl -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target sympl make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color= Scanning dependencies of target fit_spline_xform make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 78%] Linking CXX executable ../bin/geomatch cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/geomatch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/geomatch.dir/geomatch.cxx.o -o ../bin/geomatch -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target geomatch make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color= Scanning dependencies of target reorient make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/reorient.dir/reorient.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reorient.dir/reorient.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/reorient.cxx [ 78%] Linking CXX executable ../bin/dbtool cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbtool.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dbtool.dir/dbtool.cxx.o -o ../bin/dbtool -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target dbtool make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= Scanning dependencies of target film make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/film.dir/film.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/film.dir/film.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/film.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/reorient.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/film.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 78%] Linking CXX executable ../bin/jidb cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/jidb.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/jidb.dir/jidb.cxx.o -o ../bin/jidb -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target jidb make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color= Scanning dependencies of target fib2image make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/fib2image.dir/fib2image.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fib2image.dir/fib2image.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 78%] Linking CXX executable ../bin/reorient cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reorient.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reorient.dir/reorient.cxx.o -o ../bin/reorient -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target reorient make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= Scanning dependencies of target fit_affine_xform_landmarks make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx [ 79%] Linking CXX executable ../bin/fit_spline_xform cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_xform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -o ../bin/fit_spline_xform -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target fit_spline_xform make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color= Scanning dependencies of target fibxform make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/fibxform.dir/fibxform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fibxform.dir/fibxform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 80%] Linking CXX executable ../bin/fib2image cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fib2image.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fib2image.dir/fib2image.cxx.o -o ../bin/fib2image -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target fib2image make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color= Scanning dependencies of target epiunwarp make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 80%] Linking CXX executable ../bin/fit_affine_xform_landmarks cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform_landmarks.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -o ../bin/fit_affine_xform_landmarks -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target fit_affine_xform_landmarks make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= Scanning dependencies of target hausdorff make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/hausdorff.dir/hausdorff.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 80%] Linking CXX executable ../bin/fibxform cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fibxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fibxform.dir/fibxform.cxx.o -o ../bin/fibxform -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target fibxform make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= Scanning dependencies of target mat2dof make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mat2dof.dir/mat2dof.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx [ 81%] Linking CXX executable ../bin/hausdorff cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/hausdorff.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/hausdorff.dir/hausdorff.cxx.o -o ../bin/hausdorff -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target hausdorff make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= Scanning dependencies of target regress make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/regress.dir/regress.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/regress.dir/regress.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/regress.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/regress.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 81%] Linking CXX executable ../bin/film cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/film.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/film.dir/film.cxx.o -o ../bin/film -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target film make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= Scanning dependencies of target dwi_mask_bad_slices make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 81%] Linking CXX executable ../bin/epiunwarp cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/epiunwarp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -o ../bin/epiunwarp -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target epiunwarp make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color= Scanning dependencies of target histogram make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/histogram.dir/histogram.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/histogram.dir/histogram.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/histogram.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/histogram.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 82%] Linking CXX executable ../bin/mat2dof cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mat2dof.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mat2dof.dir/mat2dof.cxx.o -o ../bin/mat2dof -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 82%] Built target mat2dof make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= Scanning dependencies of target stream_pixels make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 82%] Building CXX object apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 82%] Linking CXX executable ../bin/regress cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/regress.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/regress.dir/regress.cxx.o -o ../bin/regress -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 82%] Built target regress make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= Scanning dependencies of target average_images make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 82%] Building CXX object apps/CMakeFiles/average_images.dir/average_images.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_images.dir/average_images.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/average_images.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/average_images.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 83%] Linking CXX executable ../bin/dwi_mask_bad_slices cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dwi_mask_bad_slices.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -o ../bin/dwi_mask_bad_slices -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target dwi_mask_bad_slices make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color= Scanning dependencies of target fit_affine_dfield make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx [ 83%] Linking CXX executable ../bin/histogram cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/histogram.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/histogram.dir/histogram.cxx.o -o ../bin/histogram -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target histogram make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= Scanning dependencies of target asegment make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/asegment.dir/asegment.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment.dir/asegment.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/asegment.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/asegment.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 83%] Linking CXX executable ../bin/stream_pixels cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/stream_pixels.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -o ../bin/stream_pixels -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target stream_pixels make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= Scanning dependencies of target pxsearch make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/pxsearch.dir/pxsearch.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 83%] Linking CXX executable ../bin/fit_affine_dfield cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -o ../bin/fit_affine_dfield -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target fit_affine_dfield make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= Scanning dependencies of target fit_affine_xform make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 83%] Linking CXX executable ../bin/asegment cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment.dir/asegment.cxx.o -o ../bin/asegment -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target asegment make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color= Scanning dependencies of target lvote make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/lvote.dir/lvote.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lvote.dir/lvote.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/lvote.cxx [ 84%] Linking CXX executable ../bin/average_images cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_images.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_images.dir/average_images.cxx.o -o ../bin/average_images -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target average_images make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color= Scanning dependencies of target mk_nifti_hdr make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/lvote.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 84%] Linking CXX executable ../bin/pxsearch cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/pxsearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/pxsearch.dir/pxsearch.cxx.o -o ../bin/pxsearch -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target pxsearch make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= Scanning dependencies of target vol2csv make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vol2csv.dir/vol2csv.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 84%] Linking CXX executable ../bin/fit_affine_xform cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -o ../bin/fit_affine_xform -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target fit_affine_xform make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= Scanning dependencies of target groupwise_warp make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx:39: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 85%] Linking CXX executable ../bin/mk_nifti_hdr cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_nifti_hdr.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -o ../bin/mk_nifti_hdr -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target mk_nifti_hdr make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= Scanning dependencies of target split make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/split.dir/split.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/split.dir/split.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/split.cxx [ 85%] Linking CXX executable ../bin/lvote cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lvote.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lvote.dir/lvote.cxx.o -o ../bin/lvote -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target lvote make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= Scanning dependencies of target avg_adm make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/avg_adm.dir/avg_adm.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/split.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 85%] Linking CXX executable ../bin/vol2csv cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vol2csv.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vol2csv.dir/vol2csv.cxx.o -o ../bin/vol2csv -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target vol2csv make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color= Scanning dependencies of target registrationx make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/registrationx.dir/registrationx.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registrationx.dir/registrationx.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx:40: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 85%] Linking CXX executable ../bin/split cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/split.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/split.dir/split.cxx.o -o ../bin/split -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target split make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color= Scanning dependencies of target groupwise_affine make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx [ 86%] Linking CXX executable ../bin/registrationx cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registrationx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registrationx.dir/registrationx.cxx.o -o ../bin/registrationx -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target registrationx make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color= Scanning dependencies of target mk_analyze_hdr make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Building CXX object apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx:39: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 86%] Linking CXX executable ../bin/avg_adm cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/avg_adm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/avg_adm.dir/avg_adm.cxx.o -o ../bin/avg_adm -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target avg_adm make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color= Scanning dependencies of target average_labels make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Building CXX object apps/CMakeFiles/average_labels.dir/average_labels.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_labels.dir/average_labels.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 86%] Linking CXX executable ../bin/groupwise_warp cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -o ../bin/groupwise_warp -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target groupwise_warp make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= Scanning dependencies of target concat_affine make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Building CXX object apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/concat_affine.dir/concat_affine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx In file included from /usr/include/string.h:495, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:49, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35: In function ‘char* strncpy(char*, const char*, size_t)’, inlined from ‘void cmtk::FileHeader::StoreFieldString(size_t, const char*, size_t)’ at /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileHeader.h:74:14, inlined from ‘void cmtk::FileHeader::StoreFieldString(size_t, const char*, size_t)’ at /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileHeader.h:71:8, inlined from ‘int doMain(int, const char**)’ at /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:275:28: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:106:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx: In function ‘int doMain(int, const char**)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:275:72: note: length computed here 275 | header.StoreFieldString( 148, Description, std::min( strlen( Description )+1, 80 ) ); | ~~~~~~^~~~~~~~~~~~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 86%] Linking CXX executable ../bin/mk_analyze_hdr cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_analyze_hdr.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -o ../bin/mk_analyze_hdr -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target mk_analyze_hdr make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= Scanning dependencies of target warpx make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Building CXX object apps/CMakeFiles/warpx.dir/warpx.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warpx.dir/warpx.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/warpx.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/warpx.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 87%] Linking CXX executable ../bin/average_labels cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_labels.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_labels.dir/average_labels.cxx.o -o ../bin/average_labels -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target average_labels make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= Scanning dependencies of target volume_injection make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_injection.dir/volume_injection.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx [ 87%] Linking CXX executable ../bin/warpx cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warpx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warpx.dir/warpx.cxx.o -o ../bin/warpx -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 88%] Linking CXX executable ../bin/concat_affine cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/concat_affine.dir/link.txt --verbose=1 [ 88%] Built target warpx make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/concat_affine.dir/concat_affine.cxx.o -o ../bin/concat_affine -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ Scanning dependencies of target groupwise_init make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 89%] Building CXX object apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 89%] Built target concat_affine make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color= Scanning dependencies of target mk_adni_phantom make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Building CXX object apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx:39: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 90%] Linking CXX executable ../bin/groupwise_affine cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -o ../bin/groupwise_affine -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Built target groupwise_affine make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color= Scanning dependencies of target sbai make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Building CXX object apps/CMakeFiles/sbai.dir/sbai.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sbai.dir/sbai.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/sbai.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/sbai.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 90%] Linking CXX executable ../bin/mk_adni_phantom cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_adni_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -o ../bin/mk_adni_phantom -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Built target mk_adni_phantom make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= Scanning dependencies of target describe make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Building CXX object apps/CMakeFiles/describe.dir/describe.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/describe.dir/describe.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/describe.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/describe.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/describe.cxx: In function ‘void DescribeImage(const char*)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:30: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:40: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:50: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:24: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:29: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:34: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld [ 90%] Linking CXX executable ../bin/groupwise_init cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_init.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -o ../bin/groupwise_init -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Built target groupwise_init make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= Scanning dependencies of target average_affine make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/average_affine.dir/average_affine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_affine.dir/average_affine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx [ 91%] Linking CXX executable ../bin/volume_injection cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_injection.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_injection.dir/volume_injection.cxx.o -o ../bin/volume_injection -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target volume_injection make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= Scanning dependencies of target glm make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/glm.dir/glm.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/glm.dir/glm.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/glm.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/glm.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 91%] Linking CXX executable ../bin/sbai cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbai.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sbai.dir/sbai.cxx.o -o ../bin/sbai -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target sbai make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color= Scanning dependencies of target make_initial_affine make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 91%] Linking CXX executable ../bin/average_affine cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_affine.dir/average_affine.cxx.o -o ../bin/average_affine -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target average_affine make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= Scanning dependencies of target convert_warp make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convert_warp.dir/convert_warp.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx [ 92%] Linking CXX executable ../bin/describe cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/describe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/describe.dir/describe.cxx.o -o ../bin/describe -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target describe make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= Scanning dependencies of target destripe make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/destripe.dir/destripe.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/destripe.dir/destripe.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/destripe.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/destripe.cxx:33: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 92%] Linking CXX executable ../bin/make_initial_affine cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_initial_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -o ../bin/make_initial_affine -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 92%] Linking CXX executable ../bin/glm cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/glm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/glm.dir/glm.cxx.o -o ../bin/glm -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target make_initial_affine make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= Scanning dependencies of target imagemath make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/imagemath.dir/imagemath.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/imagemath.dir/imagemath.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target glm make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= Scanning dependencies of target similarity make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/similarity.dir/similarity.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/similarity.dir/similarity.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/similarity.cxx [ 92%] Linking CXX executable ../bin/convert_warp cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convert_warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convert_warp.dir/convert_warp.cxx.o -o ../bin/convert_warp -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target convert_warp make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= Scanning dependencies of target gregxform make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/gregxform.dir/gregxform.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gregxform.dir/gregxform.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/similarity.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 92%] Linking CXX executable ../bin/destripe cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/destripe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/destripe.dir/destripe.cxx.o -o ../bin/destripe -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target destripe make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= Scanning dependencies of target dof2mat make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dof2mat.dir/dof2mat.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx: In function ‘int doMain(int, const char**)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:191:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 191 | fgets( line, 80, infile ); | ~~~~~^~~~~~~~~~~~~~~~~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 92%] Linking CXX executable ../bin/dof2mat cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dof2mat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dof2mat.dir/dof2mat.cxx.o -o ../bin/dof2mat -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target dof2mat make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= Scanning dependencies of target levelset make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/levelset.dir/levelset.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/levelset.dir/levelset.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/levelset.cxx [ 92%] Linking CXX executable ../bin/gregxform cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gregxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gregxform.dir/gregxform.cxx.o -o ../bin/gregxform -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target gregxform make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= Scanning dependencies of target fit_spline_dfield make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx [ 92%] Linking CXX executable ../bin/similarity cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/similarity.dir/similarity.cxx.o -o ../bin/similarity -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target similarity make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLine.h:41, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/levelset.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ Scanning dependencies of target lsba make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/lsba.dir/lsba.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lsba.dir/lsba.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/lsba.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/lsba.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 93%] Linking CXX executable ../bin/levelset cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/levelset.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/levelset.dir/levelset.cxx.o -o ../bin/levelset -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target levelset make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= Scanning dependencies of target interleaved_bad_slices make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 94%] Linking CXX executable ../bin/imagemath cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/imagemath.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/imagemath.dir/imagemath.cxx.o -o ../bin/imagemath -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 94%] Built target imagemath make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= Scanning dependencies of target lmsba make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/lmsba.dir/lmsba.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lmsba.dir/lmsba.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx [ 94%] Linking CXX executable ../bin/fit_spline_dfield cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -o ../bin/fit_spline_dfield -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 94%] Built target fit_spline_dfield make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= Scanning dependencies of target statistics make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/statistics.dir/statistics.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/statistics.dir/statistics.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/statistics.cxx [ 95%] Linking CXX executable ../bin/lsba cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lsba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lsba.dir/lsba.cxx.o -o ../bin/lsba -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/statistics.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target lsba make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= Scanning dependencies of target mk_phantom_3d make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 95%] Linking CXX executable ../bin/interleaved_bad_slices cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/interleaved_bad_slices.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -o ../bin/interleaved_bad_slices -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx: In function ‘int doMain(int, const char**)’: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:192:7: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 192 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/10/memory:83, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:46: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target interleaved_bad_slices make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= Scanning dependencies of target mrbias make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/mrbias.dir/mrbias.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mrbias.dir/mrbias.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 95%] Linking CXX executable ../bin/lmsba cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmsba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lmsba.dir/lmsba.cxx.o -o ../bin/lmsba -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target lmsba make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= Scanning dependencies of target convertx make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/convertx.dir/convertx.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convertx.dir/convertx.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/convertx.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/convertx.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 95%] Linking CXX executable ../bin/statistics cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/statistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/statistics.dir/statistics.cxx.o -o ../bin/statistics -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target statistics make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= Scanning dependencies of target overlap make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/overlap.dir/overlap.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/overlap.dir/overlap.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/overlap.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/overlap.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 96%] Linking CXX executable ../bin/mk_phantom_3d cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_phantom_3d.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -o ../bin/mk_phantom_3d -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target mk_phantom_3d make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= Scanning dependencies of target filter make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/filter.dir/filter.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/filter.dir/filter.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/filter.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/filter.cxx:36: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 96%] Linking CXX executable ../bin/mrbias cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mrbias.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mrbias.dir/mrbias.cxx.o -o ../bin/mrbias -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target mrbias make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= [ 96%] Linking CXX executable ../bin/overlap cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/overlap.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/overlap.dir/overlap.cxx.o -o ../bin/overlap -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target probe make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/probe.dir/probe.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/probe.dir/probe.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/probe.cxx make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target overlap make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color= Scanning dependencies of target reformatx make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 97%] Building CXX object apps/CMakeFiles/reformatx.dir/reformatx.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reformatx.dir/reformatx.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx [ 98%] Linking CXX executable ../bin/filter cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/filter.dir/filter.cxx.o -o ../bin/filter -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target filter make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake --color= Scanning dependencies of target registration make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Building CXX object apps/CMakeFiles/registration.dir/registration.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registration.dir/registration.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/registration.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/probe.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38, from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/registration.cxx:40: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 98%] Linking CXX executable ../bin/registration cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registration.dir/registration.cxx.o -o ../bin/registration -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target registration make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= Scanning dependencies of target sba make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Building CXX object apps/CMakeFiles/sba.dir/sba.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sba.dir/sba.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/sba.cxx [ 99%] Linking CXX executable ../bin/convertx cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convertx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convertx.dir/convertx.cxx.o -o ../bin/convertx -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target convertx make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color= Scanning dependencies of target mcaffine make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Building CXX object apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcaffine.dir/mcaffine.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/sba.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx:37: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 99%] Linking CXX executable ../bin/probe cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/probe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/probe.dir/probe.cxx.o -o ../bin/probe -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target probe make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color= Scanning dependencies of target sequence make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Building CXX object apps/CMakeFiles/sequence.dir/sequence.cxx.o cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sequence.dir/sequence.cxx.o -c /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/sequence.cxx [ 99%] Linking CXX executable ../bin/sba cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sba.dir/sba.cxx.o -o ../bin/sba -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps/sequence.cxx:35: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target sba [100%] Linking CXX executable ../bin/sequence cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sequence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sequence.dir/sequence.cxx.o -o ../bin/sequence -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [100%] Built target sequence [100%] Linking CXX executable ../bin/reformatx cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reformatx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reformatx.dir/reformatx.cxx.o -o ../bin/reformatx -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [100%] Built target reformatx [100%] Linking CXX executable ../bin/mcaffine cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcaffine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcaffine.dir/mcaffine.cxx.o -o ../bin/mcaffine -L/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [100%] Built target mcaffine make[2]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' rm -f debian/cmtk.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg' ARGS=--verbose xvfb-run --auto-servernum --server-num=20 \ dh_auto_test cd obj-x86_64-linux-gnu && make -j4 test ARGS\+=-j4 make[2]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --auto-servernum --server-num '20' -- 'dh_auto_test' -j4 Test project /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu No tests were found!!! make[2]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh_testroot -a dh_prep -a rm -f -- debian/cmtk.substvars rm -fr -- debian/.debhelper/generated/cmtk/ debian/cmtk/ debian/tmp/ dh_installdirs -a install -d debian/cmtk/etc/cmtk rm -f debian/cmtk.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg' dh_auto_install cd obj-x86_64-linux-gnu && make -j4 install DESTDIR=/build/cmtk-IKrXTh/cmtk-3.3.1p1\+dfsg/debian/cmtk AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg -B/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/mxml /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Numerics /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'Utilities/mxml/CMakeFiles/cmtkMxml.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Numerics/CMakeFiles/cmtkNumerics.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 10%] Built target NrrdIO [ 11%] Built target cmtkMxml make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend [ 16%] Built target cmtkNumerics make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/System /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/System/CMakeFiles/cmtkSystem.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 22%] Built target cmtkSystem make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Base /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Base/CMakeFiles/cmtkBase.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 42%] Built target cmtkBase make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/IO /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/IO/CMakeFiles/cmtkIO.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 50%] Built target cmtkIO make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Registration /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Registration/CMakeFiles/cmtkRegistration.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Built target cmtkRegistration make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Recon /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/libs/Segmentation /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Recon/CMakeFiles/cmtkRecon.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build [ 63%] Built target cmtkRecon make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 67%] Built target cmtkSegmentation make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/detect_spheres_matched_filter.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dcm2image.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build [ 68%] Built target detect_spheres_matched_filter make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend [ 68%] Built target dcm2image make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color= make[4]: Nothing to be done for 'apps/CMakeFiles/detect_adni_phantom.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mcwarp.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= [ 68%] Built target detect_adni_phantom make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= [ 68%] Built target mcwarp make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/asegment_sri24.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2scalar.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target asegment_sri24 make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend [ 69%] Built target xform2scalar make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2dfield.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2itk.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build [ 70%] Built target xform2dfield make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/warp2ps.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target xform2itk make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build [ 70%] Built target warp2ps make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/warp.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= [ 71%] Built target warp make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/vtkxform.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/volume_reconstruction.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build [ 71%] Built target vtkxform make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/unwarp_image_phantom.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/unsplit.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 73%] Built target volume_reconstruction [ 73%] Built target unsplit [ 73%] Built target unwarp_image_phantom make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/ttest.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/symplx.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sympl.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target ttest make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend [ 74%] Built target symplx make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend [ 74%] Built target sympl make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/streamxform.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= [ 75%] Built target streamxform make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/gmm.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/jidb.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build [ 76%] Built target gmm make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color= make[4]: Nothing to be done for 'apps/CMakeFiles/dbtool.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 76%] Built target jidb make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/geomatch.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target dbtool make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= [ 78%] Built target geomatch make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/reorient.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_xform.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/film.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target reorient [ 78%] Built target fit_spline_xform [ 78%] Built target film make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color= cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fib2image.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target fib2image make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform_landmarks.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/epiunwarp.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fibxform.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/hausdorff.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target epiunwarp make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend [ 79%] Built target fit_affine_xform_landmarks make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend [ 80%] Built target fibxform make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend [ 81%] Built target hausdorff make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/regress.dir/build'. make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/histogram.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dwi_mask_bad_slices.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mat2dof.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target regress make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend [ 82%] Built target mat2dof [ 82%] Built target histogram make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= [ 83%] Built target dwi_mask_bad_slices make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color= cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/stream_pixels.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target stream_pixels make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/average_images.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_dfield.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/asegment.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/pxsearch.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target asegment make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend [ 83%] Built target average_images [ 83%] Built target fit_affine_dfield make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color= [ 83%] Built target pxsearch make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/lvote.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_nifti_hdr.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/vol2csv.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target lvote [ 84%] Built target fit_affine_xform make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend [ 85%] Built target mk_nifti_hdr make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= [ 85%] Built target vol2csv make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_warp.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target groupwise_warp make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/split.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/registrationx.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/avg_adm.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target split make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target avg_adm make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend [ 86%] Built target registrationx make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_analyze_hdr.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target groupwise_affine make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/average_labels.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/concat_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target mk_analyze_hdr make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= [ 87%] Built target average_labels make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend [ 88%] Built target concat_affine make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/warpx.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/volume_injection.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 88%] Built target volume_injection make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend [ 88%] Built target warpx make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_adni_phantom.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_init.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sbai.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 89%] Built target mk_adni_phantom make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/describe.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Built target groupwise_init make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend [ 90%] Built target sbai make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color= [ 91%] Built target describe make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/average_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/make_initial_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering 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/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/convert_warp.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= [ 92%] Built target convert_warp make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/similarity.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build [ 92%] Built target similarity make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/destripe.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/imagemath.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/gregxform.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target imagemath [ 92%] Built target destripe make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dof2mat.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target gregxform make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= [ 92%] Built target dof2mat make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_dfield.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/levelset.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build [ 93%] Built target levelset [ 93%] Built target fit_spline_dfield make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/interleaved_bad_slices.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/lsba.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 94%] Built target interleaved_bad_slices [ 94%] Built target lsba make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/lmsba.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/statistics.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build [ 94%] Built target lmsba [ 95%] Built target statistics make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mrbias.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_phantom_3d.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= [ 95%] Built target mrbias make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= [ 95%] Built target mk_phantom_3d make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/convertx.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/overlap.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/probe.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/filter.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target probe [ 96%] Built target convertx make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend [ 97%] Built target filter [ 96%] Built target overlap make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake --color= cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/reformatx.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sba.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target reformatx [ 99%] Built target sba make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/registration.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mcaffine.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target registration [ 99%] Built target mcaffine make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build make[4]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sequence.dir/build'. make[4]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [100%] Built target sequence make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/COPYING.txt -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/README.txt -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.vtk -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.numdiff -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.NrrdIO -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.cmtk -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.zlib -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.sqlite3 -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.dcmtk -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.mxml -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.alglib -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/UseCMTK.cmake -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/CMTKConfig.cmake -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtkconfig.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/CMTKLibraryDepends.cmake -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libNrrdIO.so -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/NrrdIO.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtk_NrrdIO_mangle.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateAir.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateBiff.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateNrrd.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teem32bit.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemDio.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemEndian.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemPng.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemQnanhibit.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkMxml.so -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtk_mxml_mangle.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/mxml-private.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/mxml.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/config.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/film -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/film" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/split -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/split" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCannotBeCopied.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLine.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineTypeTraits.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCompressedStream.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkConsole.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCoverity.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkDebugOutput.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkException.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkExitException.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFFTW.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFileUtils.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkLockingPtr.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMemory.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMountPoints.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMutexLock.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgress.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgressConsole.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkRegressionTracker.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounter.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterGCD.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterMutex.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartConstPtr.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartPtr.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStackBacktrace.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStrUtility.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTestFunctionMap.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameters.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPool.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphore.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSystemTypes.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreads.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTimers.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/doxygen.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineConvert.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineItem.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineList.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineOption.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineVector.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreAppleIsRetarded.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreNone.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphorePOSIX.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreWindows.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ap.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/apvt.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bdsvd.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bidiagonal.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/blas.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/cholesky.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/det.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/gammaf.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hessenberg.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hsschur.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ibetaf.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/igammaf.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lbfgsb.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lq.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lu.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/normaldistr.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/nsevd.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/qr.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/randomc.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/reflections.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/rotations.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sblas.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sevd.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/spddet.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studenttdistr.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studentttests.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/svd.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tdevd.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tridiagonal.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveDeformationModel.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveShapeModel.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXform.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXformUniformVolume.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientation.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientationBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkBitVector.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCompatibilityMatrix4x4.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicInterpolator.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicSpline.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridLocalCorrelation.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridMorphologicalOperators.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataTypeTraits.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDeformationField.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDetectedPhantomMagphanEMR051.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDirectionSet.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDistanceMap.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterMask.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterVolume.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToLandmarks.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToWarpXform.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToXformList.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitPolynomialToLandmarks.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitRigidToLandmarks.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToDeformationField.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToLandmarks.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToXformList.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitToXformListBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedArray.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedVector.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGaussianKernel.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGeneralLinearModel.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHashMapSTL.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHypothesisTests.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperation.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationBoundaryMap.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConnectedComponents.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConvertType.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropRegion.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropThreshold.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDistanceMap.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDownsample.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilate.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilateDistance.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationFlip.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationGaussFilter.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationHistogramEqualization.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationLaplaceFilter.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationMapValues.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationOtsuThreshold.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationPruneHistogram.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRegionFilter.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationReplace.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationResampleIsotropic.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRevert.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationScaleToRange.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetDataClass.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetPadding.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationThreshold.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageTemplate.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkInterpolator.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogram.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogramBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmark.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkList.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPair.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPairList.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLeastSquares.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLinearInterpolator.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLogHistogram.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMacros.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMagphanEMR051.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathFunctionWrappers.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix3x3.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix4x4.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMetaInformationObject.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkNearestNeighborInterpolator.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkParametricPlane.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomial.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomialXform.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkProbeInfo.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionIndexIterator.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionSphereIterator.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImage.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImageGradientField.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSegmentationLabel.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSincInterpolator.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXform.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXformUniformVolume.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSurfaceNormal.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSymmetricMatrix.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeFromSpaceAffine.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeToSpaceAffine.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformedVolumeAxes.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArray.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunction.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramEqualization.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramMatching.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypes.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformDistanceMap.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeGaussianFilter.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeHoughTransformSphere.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorPartialVolume.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeLaplaceFilter.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeMorphologicalOperators.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumePainter.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnionFind.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnits.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector3D.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeClipping.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeGridToGridLookup.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkWarpXform.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXform.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformList.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformListEntry.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformUniformVolume.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/doxygen.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil_Statistics.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray_Statistics.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAffineXformITKIO.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAnalyze.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamAffineXform.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamInput.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamOutput.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamPolynomialXform.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamStudyList.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkDICOM.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileConstHeader.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileFormat.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileHeader.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkGroupwiseRegistrationFunctionalIO.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageFileDICOM.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationApplyMask.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationMatchIntensities.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageStackDICOM.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkIO.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkListIO.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkPhantomIO.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSQLite.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSegmentationLabelIO.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSiemensCSAHeader.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSplineWarpXformITKIO.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudy.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyImageSet.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyList.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStream.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamInput.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamOutput.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamStudylist.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromFile.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromSlices.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromStudy.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeIO.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformIO.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformListIO.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/doxygen.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1_io_math.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineCongealingFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistration.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistrationCommandLine.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestDirectionOptimizer.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestNeighbourOptimizer.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkCongealingFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkEchoPlanarUnwarpFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistration.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistrationCommandLine.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationOutput.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkHausdorffDistance.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistration.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationCommandLine.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistration.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistration.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityJointHistogram.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasure.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureCR.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMI.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMSD.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNCC.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNMI.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureRMS.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLine.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLineBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctionalBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageXformDB.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMakeInitialAffineTransformation.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctionalBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizer.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizerBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkProtocolCallback.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationCallback.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationJointHistogram.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkScaleHistogramValueTrait.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSearchTrace.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetricElasticFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetryPlaneFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTemplateMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarity.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarityMemory.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctionalTemplate.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCorrRatio.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCrossCorrelation.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingElasticFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMeanSquaredDifference.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric_Type.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMutInf.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingNormMutInf.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelRegistration.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/doxygen.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctionalMetricData.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctionalMetricData.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeJacobian.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumePlain.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeReformat.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctionalThreadFunctions.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkAtlasSegmentation.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkDetectPhantomMagphanEMR051.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalVoting.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalWeighting.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationSTAPLE.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveraging.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationVoting.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkMultiChannelEntropyMinimizationIntensityCorrectionFunctional.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkOverlapMeasures.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelset.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLine.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLineBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/doxygen.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so -- Set runtime path of "/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionBox.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionGaussian.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkVolumeInjectionReconstruction.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/doxygen.h -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.txx -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking.sh -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking_procmail.sh -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- Installing: /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/bin/cmtk make[2]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' : # Remove not needed headers, cmake files etc rm -fr /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include /usr/bin/find /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk -iname *.cmake -delete /usr/bin/find: paths must precede expression: `cmtkConfigureCPack.cmake' /usr/bin/find: possible unquoted pattern after predicate `-iname'? make[1]: [debian/rules:72: override_dh_auto_install] Error 1 (ignored) : # Prune duplicate docs rm -fr /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc : # Generate manpages xvfb-run --auto-servernum --server-num=20 \ scripts/gen_manpages \ || dpkg -l xvfb | awk '/xvfb/{print ;}' | grep -q ubuntu ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh: 37: .: Can't open /usr/lib/cmtk/bin/cmtk_locking.sh Manpage for /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion: 34: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh Manpage for /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion: 34: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh Manpage for /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion: 36: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh Manpage for /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat: 36: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh Manpage for /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. : # Above condition just to ignore unclean exit from xvfb on elderly broken ubuntus : # Cleaner solution patches are welcome! make[1]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg' dh_install -a cp --reflink=auto -a ./debian/cmtk.sh debian/cmtk/etc/cmtk/ install -d debian/.debhelper/generated/cmtk dh_installdocs -a install -d debian/cmtk/usr/share/doc/cmtk cp --reflink=auto -a ./README.txt debian/cmtk/usr/share/doc/cmtk cd './debian/upstream/..' && find 'upstream' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/doc/cmtk chown -R 0:0 debian/cmtk/usr/share/doc chmod -R u\+rw,go=rX debian/cmtk/usr/share/doc install -p -m0644 debian/README.Debian debian/cmtk/usr/share/doc/cmtk/README.Debian install -p -m0644 debian/TODO debian/cmtk/usr/share/doc/cmtk/TODO.Debian install -p -m0644 debian/copyright debian/cmtk/usr/share/doc/cmtk/copyright dh_installchangelogs -a install -p -m0644 ./CHANGELOG debian/cmtk/usr/share/doc/cmtk/changelog rm -f debian/cmtk.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg' dh_installman debian/manpages/* install -d debian/cmtk/usr/share/man/man1/ install -p -m0644 debian/manpages/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment.1 install -p -m0644 debian/manpages/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 install -p -m0644 debian/manpages/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 install -p -m0644 debian/manpages/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 install -p -m0644 debian/manpages/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 install -p -m0644 debian/manpages/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 install -p -m0644 debian/manpages/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 install -p -m0644 debian/manpages/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 install -p -m0644 debian/manpages/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 install -p -m0644 debian/manpages/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 install -p -m0644 debian/manpages/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 install -p -m0644 debian/manpages/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 install -p -m0644 debian/manpages/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 install -p -m0644 debian/manpages/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 install -p -m0644 debian/manpages/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 install -p -m0644 debian/manpages/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 install -p -m0644 debian/manpages/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 install -p -m0644 debian/manpages/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 install -p -m0644 debian/manpages/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 install -p -m0644 debian/manpages/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 install -p -m0644 debian/manpages/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 install -p -m0644 debian/manpages/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 install -p -m0644 debian/manpages/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 install -p -m0644 debian/manpages/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 install -p -m0644 debian/manpages/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 install -p -m0644 debian/manpages/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 install -p -m0644 debian/manpages/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 install -p -m0644 debian/manpages/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 install -p -m0644 debian/manpages/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 install -p -m0644 debian/manpages/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 install -p -m0644 debian/manpages/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 install -p -m0644 debian/manpages/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 install -p -m0644 debian/manpages/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 install -p -m0644 debian/manpages/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 install -p -m0644 debian/manpages/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 install -p -m0644 debian/manpages/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 install -p -m0644 debian/manpages/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 install -p -m0644 debian/manpages/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 install -p -m0644 debian/manpages/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 install -p -m0644 debian/manpages/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 install -p -m0644 debian/manpages/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 install -p -m0644 debian/manpages/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 install -p -m0644 debian/manpages/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 install -p -m0644 debian/manpages/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 install -p -m0644 debian/manpages/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 install -p -m0644 debian/manpages/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 install -p -m0644 debian/manpages/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 install -p -m0644 debian/manpages/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 install -p -m0644 debian/manpages/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 install -p -m0644 debian/manpages/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 install -p -m0644 debian/manpages/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 install -p -m0644 debian/manpages/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 install -p -m0644 debian/manpages/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 install -p -m0644 debian/manpages/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 install -p -m0644 debian/manpages/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 install -p -m0644 debian/manpages/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 install -p -m0644 debian/manpages/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 install -p -m0644 debian/manpages/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 install -p -m0644 debian/manpages/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 install -p -m0644 debian/manpages/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 install -p -m0644 debian/manpages/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 install -p -m0644 debian/manpages/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 install -p -m0644 debian/manpages/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 install -p -m0644 debian/manpages/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 install -p -m0644 debian/manpages/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 install -p -m0644 debian/manpages/cmtk-split.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 install -p -m0644 debian/manpages/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-statistics.1 install -p -m0644 debian/manpages/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 install -p -m0644 debian/manpages/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 install -p -m0644 debian/manpages/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 install -p -m0644 debian/manpages/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 install -p -m0644 debian/manpages/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 install -p -m0644 debian/manpages/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 install -p -m0644 debian/manpages/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 install -p -m0644 debian/manpages/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 install -p -m0644 debian/manpages/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 install -p -m0644 debian/manpages/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 install -p -m0644 debian/manpages/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 install -p -m0644 debian/manpages/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 install -p -m0644 debian/manpages/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 install -p -m0644 debian/manpages/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 install -p -m0644 debian/manpages/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 install -p -m0644 debian/manpages/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 install -p -m0644 debian/manpages/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 install -p -m0644 debian/manpages/cmtk.1 debian/cmtk/usr/share/man/man1/cmtk.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 mv debian/cmtk/usr/share/man/man1/cmtk-asegment.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 mv debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_images.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_images.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_labels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 mv debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 mv debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-convertx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convertx.1 mv debian/cmtk/usr/share/man/man1/cmtk-dbtool.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 mv debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 mv debian/cmtk/usr/share/man/man1/cmtk-describe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-describe.1 mv debian/cmtk/usr/share/man/man1/cmtk-destripe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-destripe.1 mv debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 mv debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 mv debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 mv debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 mv debian/cmtk/usr/share/man/man1/cmtk-fib2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 mv debian/cmtk/usr/share/man/man1/cmtk-fibxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-film.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-film.1 mv debian/cmtk/usr/share/man/man1/cmtk-filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-filter.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 mv debian/cmtk/usr/share/man/man1/cmtk-statistics.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 mv debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 mv debian/cmtk/usr/share/man/man1/cmtk-streamxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-sympl.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sympl.1 mv debian/cmtk/usr/share/man/man1/cmtk-symplx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-symplx.1 mv debian/cmtk/usr/share/man/man1/cmtk-ttest.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-ttest.1 mv debian/cmtk/usr/share/man/man1/cmtk-unsplit.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 mv debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 mv debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 mv debian/cmtk/usr/share/man/man1/cmtk-warpx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warpx.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 mv debian/cmtk/usr/share/man/man1/cmtk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-geomatch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 mv debian/cmtk/usr/share/man/man1/cmtk-glm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-glm.1 mv debian/cmtk/usr/share/man/man1/cmtk-gmm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gmm.1 mv debian/cmtk/usr/share/man/man1/cmtk-gregxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 mv debian/cmtk/usr/share/man/man1/cmtk-histogram.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-histogram.1 mv debian/cmtk/usr/share/man/man1/cmtk-imagemath.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 mv debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 mv debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 mv debian/cmtk/usr/share/man/man1/cmtk-jidb.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-jidb.1 mv debian/cmtk/usr/share/man/man1/cmtk-levelset.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-levelset.1 mv debian/cmtk/usr/share/man/man1/cmtk-lmsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 mv debian/cmtk/usr/share/man/man1/cmtk-lsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1 mv debian/cmtk/usr/share/man/man1/cmtk-lvote.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lvote.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 mv debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 mv debian/cmtk/usr/share/man/man1/cmtk-mrbias.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 mv debian/cmtk/usr/share/man/man1/cmtk-overlap.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-overlap.1 mv debian/cmtk/usr/share/man/man1/cmtk-probe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 mv debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 mv debian/cmtk/usr/share/man/man1/cmtk-reformatx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 mv debian/cmtk/usr/share/man/man1/cmtk-registration.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registration.1 mv debian/cmtk/usr/share/man/man1/cmtk-registrationx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 mv debian/cmtk/usr/share/man/man1/cmtk-regress.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-regress.1 mv debian/cmtk/usr/share/man/man1/cmtk-reorient.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 mv debian/cmtk/usr/share/man/man1/cmtk-sba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sba.1 mv debian/cmtk/usr/share/man/man1/cmtk-sbai.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sbai.1 mv debian/cmtk/usr/share/man/man1/cmtk-sequence.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1 mv debian/cmtk/usr/share/man/man1/cmtk-similarity.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-similarity.1 mv debian/cmtk/usr/share/man/man1/cmtk-split.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-split.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 make[1]: Leaving directory '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/cmtk chmod a-x usr/share/doc/cmtk/changelog usr/share/doc/cmtk/changelog.Debian usr/share/doc/cmtk/changelog.Debian.amd64 usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1 gzip -9nf usr/share/doc/cmtk/changelog usr/share/doc/cmtk/changelog.Debian usr/share/doc/cmtk/changelog.Debian.amd64 usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1 cd '/build/cmtk-IKrXTh/cmtk-3.3.1p1+dfsg' dh_fixperms -a find debian/cmtk -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/cmtk ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/cmtk/usr/share/doc -type f -a -true -a ! -regex 'debian/cmtk/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/cmtk/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/cmtk/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a dh_dwz -a install -d debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu dwz -mdebian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug -- debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so dwz: debian/cmtk/usr/lib/cmtk/libNrrdIO.so: DWARF compression not beneficial - old size 191867 new size 194896 objcopy --compress-debug-sections debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug dh_strip -a install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/09c209dc89d66a416063dcf9b50a01ece85f03.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/09c209dc89d66a416063dcf9b50a01ece85f03.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/09c209dc89d66a416063dcf9b50a01ece85f03.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSystem.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/09c209dc89d66a416063dcf9b50a01ece85f03.debug debian/cmtk/usr/lib/cmtk/libcmtkSystem.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68/88d641e8ed85ca8b709e852210f723caeb193c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68/88d641e8ed85ca8b709e852210f723caeb193c.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68/88d641e8ed85ca8b709e852210f723caeb193c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68/88d641e8ed85ca8b709e852210f723caeb193c.debug debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/21032fd72e2ff25477e323e9d242a785b1f919.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/21032fd72e2ff25477e323e9d242a785b1f919.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/21032fd72e2ff25477e323e9d242a785b1f919.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/21032fd72e2ff25477e323e9d242a785b1f919.debug debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/23b7ca81db179cd86dc2d91ff0dc33a349967f.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/23b7ca81db179cd86dc2d91ff0dc33a349967f.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/23b7ca81db179cd86dc2d91ff0dc33a349967f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRecon.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/23b7ca81db179cd86dc2d91ff0dc33a349967f.debug debian/cmtk/usr/lib/cmtk/libcmtkRecon.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/42 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/42/4236fbfe7f867e63d47b633fe7221376325427.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/42/4236fbfe7f867e63d47b633fe7221376325427.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/42/4236fbfe7f867e63d47b633fe7221376325427.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/42/4236fbfe7f867e63d47b633fe7221376325427.debug debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/47e9bb0fa42239a065f7f2efd56c8c42909075.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/47e9bb0fa42239a065f7f2efd56c8c42909075.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/47e9bb0fa42239a065f7f2efd56c8c42909075.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkMxml.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/47e9bb0fa42239a065f7f2efd56c8c42909075.debug debian/cmtk/usr/lib/cmtk/libcmtkMxml.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/29c26c1ed5f15619b82ab80a2321c82735c456.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/29c26c1ed5f15619b82ab80a2321c82735c456.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/29c26c1ed5f15619b82ab80a2321c82735c456.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/29c26c1ed5f15619b82ab80a2321c82735c456.debug debian/cmtk/usr/lib/cmtk/libcmtkIO.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/cbb08132f4f219befc48c3ddedb860857def84.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/cbb08132f4f219befc48c3ddedb860857def84.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/cbb08132f4f219befc48c3ddedb860857def84.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkBase.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/cbb08132f4f219befc48c3ddedb860857def84.debug debian/cmtk/usr/lib/cmtk/libcmtkBase.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3/795dac03c85191b7f31aea92d3b9cc1424f331.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3/795dac03c85191b7f31aea92d3b9cc1424f331.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3/795dac03c85191b7f31aea92d3b9cc1424f331.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libNrrdIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3/795dac03c85191b7f31aea92d3b9cc1424f331.debug debian/cmtk/usr/lib/cmtk/libNrrdIO.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/f0dc76b983c5993322dc35dd06dac403cc6bc8.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/f0dc76b983c5993322dc35dd06dac403cc6bc8.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/f0dc76b983c5993322dc35dd06dac403cc6bc8.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2scalar objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/f0dc76b983c5993322dc35dd06dac403cc6bc8.debug debian/cmtk/usr/lib/cmtk/bin/xform2scalar install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warpx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2/82abf986c5f1181d93e962d589fd2146516905.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2/82abf986c5f1181d93e962d589fd2146516905.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2/82abf986c5f1181d93e962d589fd2146516905.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warpx objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f2/82abf986c5f1181d93e962d589fd2146516905.debug debian/cmtk/usr/lib/cmtk/bin/warpx install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/cc21a32e5f4c34d1c54a7003de45ab8b564ea6.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/cc21a32e5f4c34d1c54a7003de45ab8b564ea6.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/cc21a32e5f4c34d1c54a7003de45ab8b564ea6.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lsba objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/cc21a32e5f4c34d1c54a7003de45ab8b564ea6.debug debian/cmtk/usr/lib/cmtk/bin/lsba install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b1 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b1/7774415a796e13d05e3fb4d8a848c5e30f464f.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b1/7774415a796e13d05e3fb4d8a848c5e30f464f.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b1/7774415a796e13d05e3fb4d8a848c5e30f464f.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/epiunwarp objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b1/7774415a796e13d05e3fb4d8a848c5e30f464f.debug debian/cmtk/usr/lib/cmtk/bin/epiunwarp install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unsplit debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7/f8c48bc33b77cc5a420b25a6b8a886450e0018.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7/f8c48bc33b77cc5a420b25a6b8a886450e0018.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7/f8c48bc33b77cc5a420b25a6b8a886450e0018.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/unsplit objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e7/f8c48bc33b77cc5a420b25a6b8a886450e0018.debug debian/cmtk/usr/lib/cmtk/bin/unsplit install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/04 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/04/a0b019d92f68541f007bdfe1d88a78a04500e3.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/04/a0b019d92f68541f007bdfe1d88a78a04500e3.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/04/a0b019d92f68541f007bdfe1d88a78a04500e3.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mat2dof objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/04/a0b019d92f68541f007bdfe1d88a78a04500e3.debug debian/cmtk/usr/lib/cmtk/bin/mat2dof install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/ttest debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/ead4b356bf3d0f7aa64449d17c838bcada3d25.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/ead4b356bf3d0f7aa64449d17c838bcada3d25.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/ead4b356bf3d0f7aa64449d17c838bcada3d25.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/ttest objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/ead4b356bf3d0f7aa64449d17c838bcada3d25.debug debian/cmtk/usr/lib/cmtk/bin/ttest install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/film debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/f039585cefd2abe9fe079e4d7a6c6d81b7444a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/f039585cefd2abe9fe079e4d7a6c6d81b7444a.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/f039585cefd2abe9fe079e4d7a6c6d81b7444a.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/film objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/79/f039585cefd2abe9fe079e4d7a6c6d81b7444a.debug debian/cmtk/usr/lib/cmtk/bin/film objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/f3392f7cb05e2bdd2e5e27455a44eaa9518598.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/f3392f7cb05e2bdd2e5e27455a44eaa9518598.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/f3392f7cb05e2bdd2e5e27455a44eaa9518598.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8d/f3392f7cb05e2bdd2e5e27455a44eaa9518598.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e3/f3a08225e0543738517556ba0ee289cac5fee2.debug chmod 0644 -- 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debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/04/602ccf2d8b61a904fa96770a8496071cd9d663.debug debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99/d7808e8c3e77e7b3b3fd60a089cd03e62b7c9b.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99/d7808e8c3e77e7b3b3fd60a089cd03e62b7c9b.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99/d7808e8c3e77e7b3b3fd60a089cd03e62b7c9b.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sba objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/99/d7808e8c3e77e7b3b3fd60a089cd03e62b7c9b.debug debian/cmtk/usr/lib/cmtk/bin/sba install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/streamxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/f281f76bd38bc57dc81d03127d90feb33c5d2f.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/f281f76bd38bc57dc81d03127d90feb33c5d2f.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/f281f76bd38bc57dc81d03127d90feb33c5d2f.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/streamxform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/f281f76bd38bc57dc81d03127d90feb33c5d2f.debug debian/cmtk/usr/lib/cmtk/bin/streamxform install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/a0ba4a1789fdf5e3be3934e4ee8713595bf334.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/a0ba4a1789fdf5e3be3934e4ee8713595bf334.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/a0ba4a1789fdf5e3be3934e4ee8713595bf334.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/a0ba4a1789fdf5e3be3934e4ee8713595bf334.debug debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lvote debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/af9d1387164f40e8aa4af68c35f2de835fff6c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/af9d1387164f40e8aa4af68c35f2de835fff6c.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/af9d1387164f40e8aa4af68c35f2de835fff6c.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lvote objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/af9d1387164f40e8aa4af68c35f2de835fff6c.debug debian/cmtk/usr/lib/cmtk/bin/lvote objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registration debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/5542d41c0087c4f26ad99ef1fab62e589d30b1.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/5542d41c0087c4f26ad99ef1fab62e589d30b1.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/5542d41c0087c4f26ad99ef1fab62e589d30b1.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registration objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5a/5542d41c0087c4f26ad99ef1fab62e589d30b1.debug debian/cmtk/usr/lib/cmtk/bin/registration install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1e objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1e/15a7a64b85b101d4742f9a378e4ee6c6993502.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1e/15a7a64b85b101d4742f9a378e4ee6c6993502.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1e/15a7a64b85b101d4742f9a378e4ee6c6993502.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp2ps objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1e/15a7a64b85b101d4742f9a378e4ee6c6993502.debug debian/cmtk/usr/lib/cmtk/bin/warp2ps install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ef objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ef/d82f8565453c6f91c071d621cc3e2bfbdfc79a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ef/d82f8565453c6f91c071d621cc3e2bfbdfc79a.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ef/d82f8565453c6f91c071d621cc3e2bfbdfc79a.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ef/d82f8565453c6f91c071d621cc3e2bfbdfc79a.debug debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/cmtk/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/cmtk/usr/lib/debug install -d debian/.debhelper/cmtk/dbgsym-root/usr/share/doc ln -s cmtk debian/.debhelper/cmtk/dbgsym-root/usr/share/doc/cmtk-dbgsym dh_makeshlibs -a rm -f debian/cmtk/DEBIAN/shlibs dh_shlibdeps -a install -d debian/cmtk/DEBIAN dpkg-shlibdeps -Tdebian/cmtk.substvars debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libNrrdIO.so contains an unresolvable reference to symbol sqrt: it's probably a plugin dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkMxml.so contains an unresolvable reference to symbol pthread_getspecific: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/sequence were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) dh_installdeb -a find debian/cmtk/etc -type f -printf '/etc/%P ' | LC_ALL=C sort >> debian/cmtk/DEBIAN/conffiles chmod 0644 -- debian/cmtk/DEBIAN/conffiles chown 0:0 -- debian/cmtk/DEBIAN/conffiles dh_gencontrol -a echo misc:Depends= >> debian/cmtk.substvars echo misc:Pre-Depends= >> debian/cmtk.substvars install -d debian/.debhelper/cmtk/dbgsym-root/DEBIAN dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/.debhelper/cmtk/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=cmtk-dbgsym "-DDepends=cmtk (= \${binary:Version})" "-DDescription=debug symbols for cmtk" "-DBuild-Ids=042dd2b004b2d1de0fd3b2b46e7a67e35d152261 04602ccf2d8b61a904fa96770a8496071cd9d663 04a0b019d92f68541f007bdfe1d88a78a04500e3 0521032fd72e2ff25477e323e9d242a785b1f919 0f84bddb1af8306f0edc0c89c37239c3e3a2edb8 10b258dbf2222c7ae8a32e61ab58126f155ad192 10ead4b356bf3d0f7aa64449d17c838bcada3d25 10fa01177e7bc658ad8626ee5e5827b3ce4a66aa 11324540c17334760e02e894737aaac1b3d6ff3a 1547b644ff352b3531c7343442816188b2e42032 18f2936d0cda4b9de1b1b32c0b95a49d5545afa4 1acc21a32e5f4c34d1c54a7003de45ab8b564ea6 1adc0acb9739edeba52e8d3a297b8d165d34b71e 1e15a7a64b85b101d4742f9a378e4ee6c6993502 2479ef619556ed36a5c832c69e22b9ef2212d6c8 265171eaef01fa6e9302edac6d5c9d001fcef02b 27dea02a1073de1eda616c2260eb1b2f0765080c 287ff429c61b8ff3425976379dad8a433ff38348 2d50037409a62fc68198215ae01d061957935da0 2d94d333567de94e75ea825541e2950f0f87c718 32ec12459ab125da46f675093a5016ab3b1921cf 331106b340b1e63c913c06c218cfb07a28e4cfa9 33f0dc76b983c5993322dc35dd06dac403cc6bc8 3710dff4f80f102ea2b49e68f76fb56fbf6d413b 424236fbfe7f867e63d47b633fe7221376325427 45932f87fbf6d8329ffadb2453addbd3d68ded7a 4b47e9bb0fa42239a065f7f2efd56c8c42909075 4fb0a7563c7fe91068ae742b78a73e0a7e83550f 573998831a23d5c77953c138ebcb875596adc7e8 5a29c26c1ed5f15619b82ab80a2321c82735c456 5a5332177e7a0b0ee6143cd2f4cc734a4569c516 5a5542d41c0087c4f26ad99ef1fab62e589d30b1 5f9defdfb3f5074e963d0fc9a15c5b79bd25cac1 633fd259cd9ea0b656fa72cadd1730e8bbfb5877 6441e75086d15f2307af9f034be1dcf2babacb51 651434afad8b020e39d478550a089a7e598f8518 6635389b3f0f6c922445f699b8de6bec4545a32b 6888d641e8ed85ca8b709e852210f723caeb193c 6949804fac0df9ecc34bafc0c66542f282f6e1ab 6e699ceaa9d1df2d8880c4eefe3b50b1d22817fe 79f039585cefd2abe9fe079e4d7a6c6d81b7444a 7fe1b7475b993bfd79ba6df7e7fd531d5a877d1a 832737dc38926b9852a0c218f737b4dde0a60909 875212071efbf6647d15ae588cb4544937544c37 8a492727150d79b4df03701bb94fa13a140260ac 8d09c209dc89d66a416063dcf9b50a01ece85f03 8df3392f7cb05e2bdd2e5e27455a44eaa9518598 91cbb08132f4f219befc48c3ddedb860857def84 93f6df31bb85d37962de1c42a109dce436543e14 9739d1dcd62a8d49c56b11f84602d6bb55fa440f 99d7808e8c3e77e7b3b3fd60a089cd03e62b7c9b 9af281f76bd38bc57dc81d03127d90feb33c5d2f 9c9b2302b86cce248003d80d7907af12df17c8ab 9cfc4bf426e08d0392746a2683b52ae89315fd13 a118a5aaa3ea8bdc2ca60629c8cb7c3147d0783e a3b756e0271ab4ee633451b95bba29e132fd39e8 a7bcf946eded9e9b320abf8a9647e46669af7e04 a854c4eedd52058b98fbb15f7c4eed88d06c1973 aa07b47a4164157b68e824cc501a8c112eacaed8 aab00ccdf6c391f70f88f8b53b74c8ca802de246 ab5bc1619c1590158f3483b54d8156faf705e14e ac0ce510707c4364a890b7e1ac9962352220855d ae1be8899f8f56fc6610fc31cb1e1906f7851b2f aec17dcf1492d7dab8fa31568ef8986e6a6d1002 b14e1e6862e340aa23ad522535fdfa90f6a52bde b17774415a796e13d05e3fb4d8a848c5e30f464f b46d445d3a06753218c7b30d08ea8339172ba0b2 bf0b7162d5bb93b5d3ea16e96727ed78ca838fe1 c1a0ba4a1789fdf5e3be3934e4ee8713595bf334 c3795dac03c85191b7f31aea92d3b9cc1424f331 c4da3f94fe18a90b2b05a3ad38c118175ef35159 cf2b8a4d5e425e82118f340766582e384bea52c9 d1b79afc88c7813f15bec3b8d8a55f66a047b317 d4aea2becc0bea2ec1ee17cc8e7ccd27bd31396f d5941d48e78fe61e59aead206929439945f3fb73 d7c612b4ac58f320bc4974efdf9882a9b79ee76b d966925df9a233c5dd12c8743f6ea6f05a6abad4 dc07e347c0003550b1b748dc0957c532e20d0678 dc55f44f780a4fe9d637ce867b7082406bffefb5 de37b2a5e8176b6ea1fde157b220a4d6e22ac437 e3f3a08225e0543738517556ba0ee289cac5fee2 e62215075cb6445d31cf2e1eca0eea8c32fa0bbe e7f8c48bc33b77cc5a420b25a6b8a886450e0018 ec46b6a95a2d16f2d2aae6d225d67d6054a76c47 eeaf9d1387164f40e8aa4af68c35f2de835fff6c efd82f8565453c6f91c071d621cc3e2bfbdfc79a f20e854ceac1e1ee9053f04f8416b9822c6e64a6 f215892c99eac23f0f11b27075a2874b0bc7a1b5 f282abf986c5f1181d93e962d589fd2146516905 f323b7ca81db179cd86dc2d91ff0dc33a349967f f6ff3012c163e992261592ed22110b5ed4ccebc6 fbd16342722894da7a6f2532bd5e6891d8893bf7" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/cmtk chmod 0644 -- debian/cmtk/DEBIAN/control chown 0:0 -- debian/cmtk/DEBIAN/control dh_md5sums -a cd debian/cmtk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/cmtk/DEBIAN/md5sums chown 0:0 -- debian/cmtk/DEBIAN/md5sums cd debian/.debhelper/cmtk/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --build debian/cmtk .. dpkg-deb --build debian/.debhelper/cmtk/dbgsym-root .. dpkg-deb: building package 'cmtk' in '../cmtk_3.3.1p1+dfsg-2+b1_amd64.deb'. dpkg-deb: building package 'cmtk-dbgsym' in '../cmtk-dbgsym_3.3.1p1+dfsg-2+b1_amd64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../cmtk_3.3.1p1+dfsg-2+b1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/cmtk-IKrXTh /tmp/cmtk-3.3.1p1+dfsg-2+b1ywjbik6m I: cleaning package lists and apt cache... W: deleting files in /tmp: .X11-unix I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.TjXv6FJ5Wd... I: success in 5229.3821 seconds md5: cmtk-dbgsym_3.3.1p1+dfsg-2+b1_amd64.deb: OK md5: Value of 'md5' differs for cmtk_3.3.1p1+dfsg-2+b1_amd64.deb md5: Size differs for cmtk_3.3.1p1+dfsg-2+b1_amd64.deb sha1: cmtk-dbgsym_3.3.1p1+dfsg-2+b1_amd64.deb: OK sha1: Value of 'sha1' differs for cmtk_3.3.1p1+dfsg-2+b1_amd64.deb sha1: Size differs for cmtk_3.3.1p1+dfsg-2+b1_amd64.deb sha256: cmtk-dbgsym_3.3.1p1+dfsg-2+b1_amd64.deb: OK sha256: Value of 'sha256' differs for cmtk_3.3.1p1+dfsg-2+b1_amd64.deb sha256: Size differs for cmtk_3.3.1p1+dfsg-2+b1_amd64.deb Checksums: FAIL diffoscope run passed