--- /tmp/brian-2.4.2-6_1jny1e0/debian/python-brian-doc_2.4.2-6_all.deb +++ python-brian-doc_2.4.2-6_all.deb ├── file list │ @@ -1,3 +1,3 @@ │ -rw-r--r-- 0 0 0 4 2021-02-20 20:42:14.000000 debian-binary │ --rw-r--r-- 0 0 0 33892 2021-02-20 20:42:14.000000 control.tar.xz │ --rw-r--r-- 0 0 0 1436400 2021-02-20 20:42:14.000000 data.tar.xz │ +-rw-r--r-- 0 0 0 33936 2021-02-20 20:42:14.000000 control.tar.xz │ +-rw-r--r-- 0 0 0 1436332 2021-02-20 20:42:14.000000 data.tar.xz ├── control.tar.xz │ ├── control.tar │ │ ├── ./md5sums │ │ │ ├── ./md5sums │ │ │ │┄ Files differ ├── data.tar.xz │ ├── data.tar │ │ ├── file list │ │ │ @@ -187,15 +187,15 @@ │ │ │ -rw-r--r-- 0 root (0) root (0) 2191 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/compartmental.spike_initiation.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 1679 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2004.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 2812 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.Fig1.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 2426 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.Fig3AB.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 3467 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.Fig3CF.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 2652 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.Fig4.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 2617 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.Fig5A.rst.txt │ │ │ --rw-r--r-- 0 root (0) root (0) 384 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.README.txt.rst.txt │ │ │ +-rw-r--r-- 0 root (0) root (0) 383 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.README.txt.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 1011 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.params.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 2180 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_Gerstner_2005.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 2404 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_Guigon_2003.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 1995 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brunel_Hakim_1999.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 7718 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brunel_Wang_2001.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 8896 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Clopath_et_al_2010_homeostasis.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 8062 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Clopath_et_al_2010_no_homeostasis.rst.txt │ │ │ @@ -204,23 +204,23 @@ │ │ │ -rw-r--r-- 0 root (0) root (0) 2538 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Hindmarsh_Rose_1984.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 5575 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Izhikevich_2007.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 7822 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Kremer_et_al_2011_barrel_cortex.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 3362 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Morris_Lecar_1981.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 3867 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Platkiewicz_Brette_2011.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 3321 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Rossant_et_al_2011bis.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 5626 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Rothman_Manis_2003.rst.txt │ │ │ --rw-r--r-- 0 root (0) root (0) 820 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.README.md.rst.txt │ │ │ +-rw-r--r-- 0 root (0) root (0) 819 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.README.md.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 9937 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_1_COBA.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 9865 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_2_gchi_astrocyte.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 13592 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_3_io_synapse.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 13198 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_4_rsmean.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 13798 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_4_synrel.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 7887 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_5_astro_ring.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 16690 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_6_COBA_with_astro.rst.txt │ │ │ --rw-r--r-- 0 root (0) root (0) 313 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.figures.mplstyle.rst.txt │ │ │ +-rw-r--r-- 0 root (0) root (0) 312 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.figures.mplstyle.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 2519 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.plot_utils.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 3144 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Sturzl_et_al_2000.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 2233 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Touboul_Brette_2008.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 4685 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Vogels_et_al_2011.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 1967 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Wang_Buszaki_1996.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 4357 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/index.rst.txt │ │ │ -rw-r--r-- 0 root (0) root (0) 1294 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/non_reliability.rst.txt │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.README.txt.rst.txt │ │ │ @@ -1,9 +1,9 @@ │ │ │ README.txt │ │ │ -============= │ │ │ +============ │ │ │ │ │ │ .. code:: none │ │ │ │ │ │ These are Brian scripts corresponding to the following paper: │ │ │ │ │ │ Brette R (2013). Sharpness of spike initiation in neurons explained by compartmentalization. │ │ │ PLoS Comp Biol, doi: 10.1371/journal.pcbi.1003338. │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.README.md.rst.txt │ │ │ @@ -1,9 +1,9 @@ │ │ │ README.md │ │ │ -============= │ │ │ +============ │ │ │ │ │ │ .. code:: none │ │ │ │ │ │ These Brian scripts reproduce the figures from the following preprint: │ │ │ │ │ │ Modeling neuron-glia interactions with the Brian 2 simulator │ │ │ Marcel Stimberg, Dan F. M. Goodman, Romain Brette, Maurizio De Pittà │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.figures.mplstyle.rst.txt │ │ │ @@ -1,9 +1,9 @@ │ │ │ figures.mplstyle │ │ │ -============= │ │ │ +============ │ │ │ │ │ │ .. code:: none │ │ │ │ │ │ axes.linewidth : 1 │ │ │ xtick.labelsize : 8 │ │ │ ytick.labelsize : 8 │ │ │ axes.labelsize : 8 │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.core.clocks.Clock.rst.txt │ │ │ @@ -6,10 +6,10 @@ │ │ │ (*Shortest import*: ``from brian2 import Clock)`` │ │ │ │ │ │ .. autoclass:: Clock │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Example :doc:`CUBA ` │ │ │ * Example :doc:`COBAHH ` │ │ │ +* Example :doc:`CUBA ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.core.functions.exprel.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -6,16 +6,16 @@ │ │ │ (*Shortest import*: ``from brian2.core.functions import exprel)`` │ │ │ │ │ │ .. autoclass:: exprel │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Example :doc:`IF_curve_Hodgkin_Huxley ` │ │ │ * Example :doc:`COBAHH ` │ │ │ -* Example :doc:`advanced/float_32_64_benchmark ` │ │ │ +* Example :doc:`IF_curve_Hodgkin_Huxley ` │ │ │ +* Example :doc:`frompapers/Wang_Buszaki_1996 ` │ │ │ * Example :doc:`advanced/exprel_function ` │ │ │ -* Example :doc:`compartmental/lfp ` │ │ │ -* Example :doc:`compartmental/hodgkin_huxley_1952 ` │ │ │ +* Example :doc:`advanced/float_32_64_benchmark ` │ │ │ * Example :doc:`compartmental/hh_with_spikes ` │ │ │ -* Example :doc:`frompapers/Wang_Buszaki_1996 ` │ │ │ +* Example :doc:`compartmental/hodgkin_huxley_1952 ` │ │ │ +* Example :doc:`compartmental/lfp ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.core.network.Network.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -9,11 +9,11 @@ │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ * Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ * Example :doc:`IF_curve_LIF ` │ │ │ * Example :doc:`IF_curve_Hodgkin_Huxley ` │ │ │ -* Example :doc:`advanced/stochastic_odes ` │ │ │ -* Example :doc:`advanced/compare_GSL_to_conventional ` │ │ │ * Example :doc:`frompapers/Brunel_Wang_2001 ` │ │ │ +* Example :doc:`advanced/compare_GSL_to_conventional ` │ │ │ +* Example :doc:`advanced/stochastic_odes ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.devices.device.Dummy.rst.txt │ │ │ @@ -6,10 +6,10 @@ │ │ │ (*Shortest import*: ``from brian2.devices.device import Dummy)`` │ │ │ │ │ │ .. autoclass:: Dummy │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Example :doc:`advanced/exprel_function ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte ` │ │ │ +* Example :doc:`advanced/exprel_function ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.equations.equations.Equations.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -6,17 +6,17 @@ │ │ │ (*Shortest import*: ``from brian2 import Equations)`` │ │ │ │ │ │ .. autoclass:: Equations │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Example :doc:`IF_curve_Hodgkin_Huxley ` │ │ │ * Example :doc:`COBAHH ` │ │ │ -* Example :doc:`advanced/float_32_64_benchmark ` │ │ │ +* Example :doc:`IF_curve_Hodgkin_Huxley ` │ │ │ +* Example :doc:`frompapers/Diesmann_et_al_1999 ` │ │ │ * Example :doc:`frompapers/Rossant_et_al_2011bis ` │ │ │ * Example :doc:`frompapers/Hindmarsh_Rose_1984 ` │ │ │ -* Example :doc:`frompapers/Diesmann_et_al_1999 ` │ │ │ -* Example :doc:`frompapers/Destexhe_et_al_1998 ` │ │ │ -* Example :doc:`frompapers/Clopath_et_al_2010_no_homeostasis ` │ │ │ * Example :doc:`frompapers/Clopath_et_al_2010_homeostasis ` │ │ │ +* Example :doc:`frompapers/Clopath_et_al_2010_no_homeostasis ` │ │ │ +* Example :doc:`frompapers/Destexhe_et_al_1998 ` │ │ │ +* Example :doc:`advanced/float_32_64_benchmark ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.groups.neurongroup.NeuronGroup.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -6,65 +6,65 @@ │ │ │ (*Shortest import*: ``from brian2 import NeuronGroup)`` │ │ │ │ │ │ .. autoclass:: NeuronGroup │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ * Tutorial :doc:`2-intro-to-brian-synapses ` │ │ │ * Tutorial :doc:`1-intro-to-brian-neurons ` │ │ │ -* Example :doc:`reliability ` │ │ │ +* Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ +* Example :doc:`COBAHH ` │ │ │ * Example :doc:`phase_locking ` │ │ │ -* Example :doc:`non_reliability ` │ │ │ * Example :doc:`adaptive_threshold ` │ │ │ +* Example :doc:`non_reliability ` │ │ │ +* Example :doc:`reliability ` │ │ │ * Example :doc:`IF_curve_LIF ` │ │ │ * Example :doc:`IF_curve_Hodgkin_Huxley ` │ │ │ * Example :doc:`CUBA ` │ │ │ -* Example :doc:`COBAHH ` │ │ │ -* Example :doc:`advanced/stochastic_odes ` │ │ │ -* Example :doc:`advanced/opencv_movie ` │ │ │ -* Example :doc:`advanced/float_32_64_benchmark ` │ │ │ -* Example :doc:`advanced/exprel_function ` │ │ │ -* Example :doc:`advanced/custom_events ` │ │ │ -* Example :doc:`advanced/compare_GSL_to_conventional ` │ │ │ -* Example :doc:`compartmental/lfp ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ -* Example :doc:`frompapers/Wang_Buszaki_1996 ` │ │ │ -* Example :doc:`frompapers/Vogels_et_al_2011 ` │ │ │ -* Example :doc:`frompapers/Touboul_Brette_2008 ` │ │ │ -* Example :doc:`frompapers/Sturzl_et_al_2000 ` │ │ │ -* Example :doc:`frompapers/Rothman_Manis_2003 ` │ │ │ -* Example :doc:`frompapers/Rossant_et_al_2011bis ` │ │ │ -* Example :doc:`frompapers/Platkiewicz_Brette_2011 ` │ │ │ -* Example :doc:`frompapers/Morris_Lecar_1981 ` │ │ │ -* Example :doc:`frompapers/Kremer_et_al_2011_barrel_cortex ` │ │ │ +* Example :doc:`frompapers/Diesmann_et_al_1999 ` │ │ │ * Example :doc:`frompapers/Izhikevich_2007 ` │ │ │ +* Example :doc:`frompapers/Brunel_Wang_2001 ` │ │ │ +* Example :doc:`frompapers/Rossant_et_al_2011bis ` │ │ │ +* Example :doc:`frompapers/Brette_2004 ` │ │ │ +* Example :doc:`frompapers/Wang_Buszaki_1996 ` │ │ │ * Example :doc:`frompapers/Hindmarsh_Rose_1984 ` │ │ │ -* Example :doc:`frompapers/Diesmann_et_al_1999 ` │ │ │ -* Example :doc:`frompapers/Clopath_et_al_2010_no_homeostasis ` │ │ │ +* Example :doc:`frompapers/Platkiewicz_Brette_2011 ` │ │ │ +* Example :doc:`frompapers/Sturzl_et_al_2000 ` │ │ │ * Example :doc:`frompapers/Clopath_et_al_2010_homeostasis ` │ │ │ -* Example :doc:`frompapers/Brunel_Wang_2001 ` │ │ │ * Example :doc:`frompapers/Brunel_Hakim_1999 ` │ │ │ -* Example :doc:`frompapers/Brette_Guigon_2003 ` │ │ │ +* Example :doc:`frompapers/Touboul_Brette_2008 ` │ │ │ +* Example :doc:`frompapers/Kremer_et_al_2011_barrel_cortex ` │ │ │ +* Example :doc:`frompapers/Clopath_et_al_2010_no_homeostasis ` │ │ │ * Example :doc:`frompapers/Brette_Gerstner_2005 ` │ │ │ -* Example :doc:`frompapers/Brette_2004 ` │ │ │ -* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro ` │ │ │ +* Example :doc:`frompapers/Brette_Guigon_2003 ` │ │ │ +* Example :doc:`frompapers/Morris_Lecar_1981 ` │ │ │ +* Example :doc:`frompapers/Vogels_et_al_2011 ` │ │ │ +* Example :doc:`frompapers/Rothman_Manis_2003 ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_5_astro_ring ` │ │ │ -* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel ` │ │ │ -* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_3_io_synapse ` │ │ │ +* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean ` │ │ │ +* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel ` │ │ │ +* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA ` │ │ │ * Example :doc:`standalone/cuba_openmp ` │ │ │ * Example :doc:`standalone/STDP_standalone ` │ │ │ -* Example :doc:`synapses/synapses ` │ │ │ +* Example :doc:`advanced/opencv_movie ` │ │ │ +* Example :doc:`advanced/compare_GSL_to_conventional ` │ │ │ +* Example :doc:`advanced/custom_events ` │ │ │ +* Example :doc:`advanced/exprel_function ` │ │ │ +* Example :doc:`advanced/float_32_64_benchmark ` │ │ │ +* Example :doc:`advanced/stochastic_odes ` │ │ │ +* Example :doc:`synapses/gapjunctions ` │ │ │ +* Example :doc:`synapses/jeffress ` │ │ │ * Example :doc:`synapses/state_variables ` │ │ │ * Example :doc:`synapses/spatial_connections ` │ │ │ -* Example :doc:`synapses/nonlinear ` │ │ │ -* Example :doc:`synapses/licklider ` │ │ │ -* Example :doc:`synapses/jeffress ` │ │ │ -* Example :doc:`synapses/gapjunctions ` │ │ │ * Example :doc:`synapses/efficient_gaussian_connectivity ` │ │ │ +* Example :doc:`synapses/nonlinear ` │ │ │ * Example :doc:`synapses/STDP ` │ │ │ +* Example :doc:`synapses/licklider ` │ │ │ +* Example :doc:`synapses/synapses ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ +* Example :doc:`compartmental/lfp ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.input.poissongroup.PoissonGroup.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -8,13 +8,13 @@ │ │ │ .. autoclass:: PoissonGroup │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ * Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ * Example :doc:`adaptive_threshold ` │ │ │ -* Example :doc:`advanced/custom_events ` │ │ │ -* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean ` │ │ │ +* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel ` │ │ │ * Example :doc:`standalone/STDP_standalone ` │ │ │ +* Example :doc:`advanced/custom_events ` │ │ │ * Example :doc:`synapses/STDP ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.input.poissoninput.PoissonInput.rst.txt │ │ │ @@ -6,10 +6,10 @@ │ │ │ (*Shortest import*: ``from brian2 import PoissonInput)`` │ │ │ │ │ │ .. autoclass:: PoissonInput │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Example :doc:`frompapers/Rossant_et_al_2011bis ` │ │ │ * Example :doc:`frompapers/Brunel_Wang_2001 ` │ │ │ +* Example :doc:`frompapers/Rossant_et_al_2011bis ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.input.spikegeneratorgroup.SpikeGeneratorGroup.rst.txt │ │ │ @@ -7,11 +7,11 @@ │ │ │ │ │ │ .. autoclass:: SpikeGeneratorGroup │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ * Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ -* Example :doc:`frompapers/Izhikevich_2007 ` │ │ │ * Example :doc:`frompapers/Diesmann_et_al_1999 ` │ │ │ +* Example :doc:`frompapers/Izhikevich_2007 ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_3_io_synapse ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.input.timedarray.TimedArray.rst.txt │ │ │ @@ -7,13 +7,13 @@ │ │ │ │ │ │ .. autoclass:: TimedArray │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ * Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ -* Example :doc:`frompapers/Sturzl_et_al_2000 ` │ │ │ * Example :doc:`frompapers/Brunel_Wang_2001 ` │ │ │ -* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro ` │ │ │ +* Example :doc:`frompapers/Sturzl_et_al_2000 ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel ` │ │ │ +* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro ` │ │ │ * Example :doc:`synapses/jeffress ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.monitors.spikemonitor.SpikeMonitor.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -6,40 +6,40 @@ │ │ │ (*Shortest import*: ``from brian2 import SpikeMonitor)`` │ │ │ │ │ │ .. autoclass:: SpikeMonitor │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ * Tutorial :doc:`1-intro-to-brian-neurons ` │ │ │ -* Example :doc:`reliability ` │ │ │ +* Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ * Example :doc:`phase_locking ` │ │ │ -* Example :doc:`non_reliability ` │ │ │ * Example :doc:`adaptive_threshold ` │ │ │ +* Example :doc:`non_reliability ` │ │ │ +* Example :doc:`reliability ` │ │ │ * Example :doc:`IF_curve_LIF ` │ │ │ * Example :doc:`IF_curve_Hodgkin_Huxley ` │ │ │ * Example :doc:`CUBA ` │ │ │ -* Example :doc:`advanced/opencv_movie ` │ │ │ -* Example :doc:`advanced/custom_events ` │ │ │ -* Example :doc:`compartmental/hh_with_spikes ` │ │ │ -* Example :doc:`frompapers/Vogels_et_al_2011 ` │ │ │ -* Example :doc:`frompapers/Touboul_Brette_2008 ` │ │ │ -* Example :doc:`frompapers/Sturzl_et_al_2000 ` │ │ │ -* Example :doc:`frompapers/Rossant_et_al_2011bis ` │ │ │ -* Example :doc:`frompapers/Platkiewicz_Brette_2011 ` │ │ │ -* Example :doc:`frompapers/Izhikevich_2007 ` │ │ │ * Example :doc:`frompapers/Diesmann_et_al_1999 ` │ │ │ +* Example :doc:`frompapers/Izhikevich_2007 ` │ │ │ * Example :doc:`frompapers/Brunel_Wang_2001 ` │ │ │ +* Example :doc:`frompapers/Rossant_et_al_2011bis ` │ │ │ +* Example :doc:`frompapers/Brette_2004 ` │ │ │ +* Example :doc:`frompapers/Platkiewicz_Brette_2011 ` │ │ │ +* Example :doc:`frompapers/Sturzl_et_al_2000 ` │ │ │ * Example :doc:`frompapers/Brunel_Hakim_1999 ` │ │ │ -* Example :doc:`frompapers/Brette_Guigon_2003 ` │ │ │ +* Example :doc:`frompapers/Touboul_Brette_2008 ` │ │ │ * Example :doc:`frompapers/Brette_Gerstner_2005 ` │ │ │ -* Example :doc:`frompapers/Brette_2004 ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ +* Example :doc:`frompapers/Brette_Guigon_2003 ` │ │ │ +* Example :doc:`frompapers/Vogels_et_al_2011 ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ * Example :doc:`standalone/cuba_openmp ` │ │ │ * Example :doc:`standalone/STDP_standalone ` │ │ │ -* Example :doc:`synapses/licklider ` │ │ │ +* Example :doc:`advanced/opencv_movie ` │ │ │ +* Example :doc:`advanced/custom_events ` │ │ │ * Example :doc:`synapses/jeffress ` │ │ │ * Example :doc:`synapses/STDP ` │ │ │ +* Example :doc:`synapses/licklider ` │ │ │ +* Example :doc:`compartmental/hh_with_spikes ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.monitors.statemonitor.StateMonitor.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -6,54 +6,54 @@ │ │ │ (*Shortest import*: ``from brian2 import StateMonitor)`` │ │ │ │ │ │ .. autoclass:: StateMonitor │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ * Tutorial :doc:`2-intro-to-brian-synapses ` │ │ │ * Tutorial :doc:`1-intro-to-brian-neurons ` │ │ │ +* Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ +* Example :doc:`COBAHH ` │ │ │ * Example :doc:`phase_locking ` │ │ │ * Example :doc:`adaptive_threshold ` │ │ │ -* Example :doc:`COBAHH ` │ │ │ -* Example :doc:`advanced/stochastic_odes ` │ │ │ -* Example :doc:`advanced/custom_events ` │ │ │ -* Example :doc:`advanced/compare_GSL_to_conventional ` │ │ │ -* Example :doc:`compartmental/spike_initiation ` │ │ │ -* Example :doc:`compartmental/lfp ` │ │ │ -* Example :doc:`compartmental/infinite_cable ` │ │ │ -* Example :doc:`compartmental/hodgkin_huxley_1952 ` │ │ │ -* Example :doc:`compartmental/hh_with_spikes ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ -* Example :doc:`compartmental/bipolar_cell ` │ │ │ -* Example :doc:`frompapers/Wang_Buszaki_1996 ` │ │ │ -* Example :doc:`frompapers/Touboul_Brette_2008 ` │ │ │ -* Example :doc:`frompapers/Rothman_Manis_2003 ` │ │ │ -* Example :doc:`frompapers/Rossant_et_al_2011bis ` │ │ │ -* Example :doc:`frompapers/Platkiewicz_Brette_2011 ` │ │ │ -* Example :doc:`frompapers/Morris_Lecar_1981 ` │ │ │ * Example :doc:`frompapers/Izhikevich_2007 ` │ │ │ +* Example :doc:`frompapers/Rossant_et_al_2011bis ` │ │ │ +* Example :doc:`frompapers/Wang_Buszaki_1996 ` │ │ │ * Example :doc:`frompapers/Hindmarsh_Rose_1984 ` │ │ │ -* Example :doc:`frompapers/Destexhe_et_al_1998 ` │ │ │ +* Example :doc:`frompapers/Platkiewicz_Brette_2011 ` │ │ │ * Example :doc:`frompapers/Clopath_et_al_2010_homeostasis ` │ │ │ -* Example :doc:`frompapers/Brette_Guigon_2003 ` │ │ │ +* Example :doc:`frompapers/Touboul_Brette_2008 ` │ │ │ +* Example :doc:`frompapers/Destexhe_et_al_1998 ` │ │ │ * Example :doc:`frompapers/Brette_Gerstner_2005 ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig4 ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig3CF ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig3AB ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig1 ` │ │ │ +* Example :doc:`frompapers/Brette_Guigon_2003 ` │ │ │ +* Example :doc:`frompapers/Morris_Lecar_1981 ` │ │ │ +* Example :doc:`frompapers/Rothman_Manis_2003 ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_5_astro_ring ` │ │ │ -* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel ` │ │ │ -* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_3_io_synapse ` │ │ │ +* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean ` │ │ │ +* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig3CF ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig1 ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig4 ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig3AB ` │ │ │ * Example :doc:`standalone/STDP_standalone ` │ │ │ -* Example :doc:`synapses/synapses ` │ │ │ -* Example :doc:`synapses/nonlinear ` │ │ │ -* Example :doc:`synapses/jeffress ` │ │ │ +* Example :doc:`advanced/compare_GSL_to_conventional ` │ │ │ +* Example :doc:`advanced/custom_events ` │ │ │ +* Example :doc:`advanced/stochastic_odes ` │ │ │ * Example :doc:`synapses/gapjunctions ` │ │ │ +* Example :doc:`synapses/jeffress ` │ │ │ +* Example :doc:`synapses/nonlinear ` │ │ │ * Example :doc:`synapses/STDP ` │ │ │ +* Example :doc:`synapses/synapses ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ +* Example :doc:`compartmental/hh_with_spikes ` │ │ │ +* Example :doc:`compartmental/infinite_cable ` │ │ │ +* Example :doc:`compartmental/spike_initiation ` │ │ │ +* Example :doc:`compartmental/bipolar_cell ` │ │ │ +* Example :doc:`compartmental/hodgkin_huxley_1952 ` │ │ │ +* Example :doc:`compartmental/lfp ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.morphology.Cylinder.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -6,24 +6,24 @@ │ │ │ (*Shortest import*: ``from brian2 import Cylinder)`` │ │ │ │ │ │ .. autoclass:: Cylinder │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Example :doc:`compartmental/spike_initiation ` │ │ │ +* Example :doc:`frompapers/Destexhe_et_al_1998 ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig3CF ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig1 ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig3AB ` │ │ │ * Example :doc:`compartmental/rall ` │ │ │ -* Example :doc:`compartmental/morphotest ` │ │ │ -* Example :doc:`compartmental/lfp ` │ │ │ -* Example :doc:`compartmental/infinite_cable ` │ │ │ -* Example :doc:`compartmental/hodgkin_huxley_1952 ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ * Example :doc:`compartmental/hh_with_spikes ` │ │ │ +* Example :doc:`compartmental/infinite_cable ` │ │ │ * Example :doc:`compartmental/cylinder ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ +* Example :doc:`compartmental/morphotest ` │ │ │ +* Example :doc:`compartmental/spike_initiation ` │ │ │ * Example :doc:`compartmental/bipolar_cell ` │ │ │ -* Example :doc:`frompapers/Destexhe_et_al_1998 ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig3CF ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig3AB ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig1 ` │ │ │ +* Example :doc:`compartmental/hodgkin_huxley_1952 ` │ │ │ +* Example :doc:`compartmental/lfp ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.morphology.Morphology.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -6,21 +6,21 @@ │ │ │ (*Shortest import*: ``from brian2 import Morphology)`` │ │ │ │ │ │ .. autoclass:: Morphology │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Example :doc:`compartmental/spike_initiation ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig3CF ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig1 ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig4 ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig3AB ` │ │ │ * Example :doc:`compartmental/rall ` │ │ │ -* Example :doc:`compartmental/morphotest ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ * Example :doc:`compartmental/infinite_cable ` │ │ │ * Example :doc:`compartmental/cylinder ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ +* Example :doc:`compartmental/morphotest ` │ │ │ +* Example :doc:`compartmental/spike_initiation ` │ │ │ * Example :doc:`compartmental/bipolar_cell ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig4 ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig3CF ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig3AB ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig1 ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.morphology.Soma.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -6,18 +6,18 @@ │ │ │ (*Shortest import*: ``from brian2 import Soma)`` │ │ │ │ │ │ .. autoclass:: Soma │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Example :doc:`compartmental/spike_initiation ` │ │ │ -* Example :doc:`compartmental/morphotest ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ -* Example :doc:`compartmental/bipolar_cell ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig3CF ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig1 ` │ │ │ * Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ * Example :doc:`frompapers/Brette_2012/Fig4 ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig3CF ` │ │ │ * Example :doc:`frompapers/Brette_2012/Fig3AB ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig1 ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ +* Example :doc:`compartmental/morphotest ` │ │ │ +* Example :doc:`compartmental/spike_initiation ` │ │ │ +* Example :doc:`compartmental/bipolar_cell ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.spatialneuron.SpatialNeuron.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -6,25 +6,25 @@ │ │ │ (*Shortest import*: ``from brian2 import SpatialNeuron)`` │ │ │ │ │ │ .. autoclass:: SpatialNeuron │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Example :doc:`compartmental/spike_initiation ` │ │ │ -* Example :doc:`compartmental/rall ` │ │ │ -* Example :doc:`compartmental/morphotest ` │ │ │ -* Example :doc:`compartmental/lfp ` │ │ │ -* Example :doc:`compartmental/infinite_cable ` │ │ │ -* Example :doc:`compartmental/hodgkin_huxley_1952 ` │ │ │ -* Example :doc:`compartmental/hh_with_spikes ` │ │ │ -* Example :doc:`compartmental/cylinder ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ -* Example :doc:`compartmental/bipolar_cell ` │ │ │ * Example :doc:`frompapers/Destexhe_et_al_1998 ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig3CF ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig1 ` │ │ │ * Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ * Example :doc:`frompapers/Brette_2012/Fig4 ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig3CF ` │ │ │ * Example :doc:`frompapers/Brette_2012/Fig3AB ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig1 ` │ │ │ +* Example :doc:`compartmental/rall ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ +* Example :doc:`compartmental/hh_with_spikes ` │ │ │ +* Example :doc:`compartmental/infinite_cable ` │ │ │ +* Example :doc:`compartmental/cylinder ` │ │ │ +* Example :doc:`compartmental/morphotest ` │ │ │ +* Example :doc:`compartmental/spike_initiation ` │ │ │ +* Example :doc:`compartmental/bipolar_cell ` │ │ │ +* Example :doc:`compartmental/hodgkin_huxley_1952 ` │ │ │ +* Example :doc:`compartmental/lfp ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.synapses.synapses.Synapses.rst.txt │ │ │┄ Ordering differences only │ │ │ @@ -6,47 +6,47 @@ │ │ │ (*Shortest import*: ``from brian2 import Synapses)`` │ │ │ │ │ │ .. autoclass:: Synapses │ │ │ │ │ │ Tutorials and examples using this │ │ │ --------------------------------- │ │ │ │ │ │ -* Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ * Tutorial :doc:`2-intro-to-brian-synapses ` │ │ │ * Tutorial :doc:`1-intro-to-brian-neurons ` │ │ │ +* Tutorial :doc:`3-intro-to-brian-simulations ` │ │ │ +* Example :doc:`COBAHH ` │ │ │ * Example :doc:`adaptive_threshold ` │ │ │ * Example :doc:`CUBA ` │ │ │ -* Example :doc:`COBAHH ` │ │ │ -* Example :doc:`advanced/float_32_64_benchmark ` │ │ │ -* Example :doc:`advanced/custom_events ` │ │ │ -* Example :doc:`compartmental/lfp ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ -* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ -* Example :doc:`frompapers/Vogels_et_al_2011 ` │ │ │ -* Example :doc:`frompapers/Sturzl_et_al_2000 ` │ │ │ -* Example :doc:`frompapers/Kremer_et_al_2011_barrel_cortex ` │ │ │ -* Example :doc:`frompapers/Izhikevich_2007 ` │ │ │ * Example :doc:`frompapers/Diesmann_et_al_1999 ` │ │ │ -* Example :doc:`frompapers/Clopath_et_al_2010_no_homeostasis ` │ │ │ -* Example :doc:`frompapers/Clopath_et_al_2010_homeostasis ` │ │ │ +* Example :doc:`frompapers/Izhikevich_2007 ` │ │ │ * Example :doc:`frompapers/Brunel_Wang_2001 ` │ │ │ +* Example :doc:`frompapers/Sturzl_et_al_2000 ` │ │ │ +* Example :doc:`frompapers/Clopath_et_al_2010_homeostasis ` │ │ │ * Example :doc:`frompapers/Brunel_Hakim_1999 ` │ │ │ -* Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ -* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro ` │ │ │ +* Example :doc:`frompapers/Kremer_et_al_2011_barrel_cortex ` │ │ │ +* Example :doc:`frompapers/Clopath_et_al_2010_no_homeostasis ` │ │ │ +* Example :doc:`frompapers/Vogels_et_al_2011 ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_5_astro_ring ` │ │ │ -* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel ` │ │ │ -* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_3_io_synapse ` │ │ │ +* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean ` │ │ │ +* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel ` │ │ │ +* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte ` │ │ │ * Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA ` │ │ │ +* Example :doc:`frompapers/Brette_2012/Fig5A ` │ │ │ * Example :doc:`standalone/cuba_openmp ` │ │ │ * Example :doc:`standalone/STDP_standalone ` │ │ │ -* Example :doc:`synapses/synapses ` │ │ │ +* Example :doc:`advanced/custom_events ` │ │ │ +* Example :doc:`advanced/float_32_64_benchmark ` │ │ │ +* Example :doc:`synapses/gapjunctions ` │ │ │ +* Example :doc:`synapses/jeffress ` │ │ │ * Example :doc:`synapses/state_variables ` │ │ │ * Example :doc:`synapses/spatial_connections ` │ │ │ -* Example :doc:`synapses/nonlinear ` │ │ │ -* Example :doc:`synapses/licklider ` │ │ │ -* Example :doc:`synapses/jeffress ` │ │ │ -* Example :doc:`synapses/gapjunctions ` │ │ │ * Example :doc:`synapses/efficient_gaussian_connectivity ` │ │ │ +* Example :doc:`synapses/nonlinear ` │ │ │ * Example :doc:`synapses/STDP ` │ │ │ +* Example :doc:`synapses/licklider ` │ │ │ +* Example :doc:`synapses/synapses ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs ` │ │ │ +* Example :doc:`compartmental/bipolar_with_inputs2 ` │ │ │ +* Example :doc:`compartmental/lfp ` │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.core.clocks.Clock.html │ │ │ @@ -116,16 +116,16 @@ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │
│ │ │

Tutorials and examples using this

│ │ │ │ │ │
│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.core.functions.exprel.html │ │ │┄ Ordering differences only │ │ │ @@ -71,22 +71,22 @@ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │
│ │ │

Tutorials and examples using this

│ │ │ │ │ │
│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.core.network.Network.html │ │ │┄ Ordering differences only │ │ │ @@ -540,17 +540,17 @@ │ │ │ │ │ │
│ │ │

Tutorials and examples using this

│ │ │ │ │ │
│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.devices.device.Dummy.html │ │ │ @@ -58,16 +58,16 @@ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │
│ │ │

Tutorials and examples using this

│ │ │ │ │ │
│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.equations.equations.Equations.html │ │ │┄ Ordering differences only │ │ │ @@ -404,23 +404,23 @@ │ │ │
│ │ │ │ │ │ │ │ │ │ │ │
│ │ │

Tutorials and examples using this

│ │ │ │ │ │
│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.groups.neurongroup.NeuronGroup.html │ │ │┄ Ordering differences only │ │ │ @@ -359,71 +359,71 @@ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │
│ │ │

Tutorials and examples using this

│ │ │ │ │ │
│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.input.poissongroup.PoissonGroup.html │ │ │┄ Ordering differences only │ │ │ @@ -126,18 +126,18 @@ │ │ │ │ │ │ │ │ │
│ │ │

Tutorials and examples using this

│ │ │ │ │ │
│ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.input.poissoninput.PoissonInput.html │ │ │ @@ -147,16 +147,16 @@ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │
│ │ │

Tutorials and examples using this

│ │ │ │ │ │
│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.input.spikegeneratorgroup.SpikeGeneratorGroup.html │ │ │ @@ -208,16 +208,16 @@ │ │ │ │ │ │ │ │ │ │ │ │
│ │ │

Tutorials and examples using this

│ │ │ │ │ │
│ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.input.timedarray.TimedArray.html │ │ │ @@ -153,18 +153,18 @@ │ │ │ │ │ │ │ │ │ │ │ │
│ │ │

Tutorials and examples using this

│ │ │ │ │ │
│ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.monitors.spikemonitor.SpikeMonitor.html │ │ │┄ Ordering differences only │ │ │ @@ -264,46 +264,46 @@ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │
│ │ │

Tutorials and examples using this

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│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.monitors.statemonitor.StateMonitor.html │ │ │┄ Ordering differences only │ │ │ @@ -213,60 +213,60 @@ │ │ │
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Tutorials and examples using this

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│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.spatialneuron.morphology.Cylinder.html │ │ │┄ Ordering differences only │ │ │ @@ -194,30 +194,30 @@ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │
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Tutorials and examples using this

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│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.spatialneuron.morphology.Morphology.html │ │ │┄ Ordering differences only │ │ │ @@ -599,27 +599,27 @@ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │
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Tutorials and examples using this

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│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.spatialneuron.morphology.Soma.html │ │ │┄ Ordering differences only │ │ │ @@ -292,24 +292,24 @@ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │
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Tutorials and examples using this

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│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.spatialneuron.spatialneuron.SpatialNeuron.html │ │ │┄ Ordering differences only │ │ │ @@ -185,31 +185,31 @@ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │
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Tutorials and examples using this

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│ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │ ├── ./usr/share/doc/python-brian-doc/docs/reference/brian2.synapses.synapses.Synapses.html │ │ │┄ Ordering differences only │ │ │ @@ -421,53 +421,53 @@ │ │ │ │ │ │ │ │ │ │ │ │ │ │ │
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Tutorials and examples using this

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