Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/b/bagel/bagel_1.2.2-2_amd64.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/bagel-1.2.2-2jcaji67x/bagel_1.2.2-2_amd64.buildinfo Get source package info: bagel=1.2.2-2 Source URL: http://snapshot.notset.fr/mr/package/bagel/1.2.2-2/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=autoconf=2.69-14 automake=1:1.16.3-2 autopoint=0.21-4 autotools-dev=20180224.1+nmu1 base-files=11 base-passwd=3.5.49 bash=5.1-2+b1 binutils=2.35.2-2 binutils-common=2.35.2-2 binutils-x86-64-linux-gnu=2.35.2-2 bsdextrautils=2.36.1-7 bsdutils=1:2.36.1-7 build-essential=12.9 bzip2=1.0.8-4 coreutils=8.32-4+b1 cpp=4:10.2.1-1 cpp-10=10.2.1-6 dash=0.5.11+git20210120+802ebd4-1 debconf=1.5.75 debhelper=13.3.4 debianutils=4.11.2 dh-autoreconf=20 dh-strip-nondeterminism=1.11.0-1 diffutils=1:3.7-5 dpkg=1.20.7.1 dpkg-dev=1.20.7.1 dwz=0.14-1 file=1:5.39-3 findutils=4.8.0-1 g++=4:10.2.1-1 g++-10=10.2.1-6 gcc=4:10.2.1-1 gcc-10=10.2.1-6 gcc-10-base=10.2.1-6 gettext=0.21-4 gettext-base=0.21-4 gfortran=4:10.2.1-1 gfortran-10=10.2.1-6 grep=3.6-1 groff-base=1.22.4-6 gzip=1.10-4 hostname=3.23 hwloc-nox=2.4.1+dfsg-1 icu-devtools=67.1-6 init-system-helpers=1.60 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-10 libarchive-zip-perl=1.68-1 libasan6=10.2.1-6 libatomic1=10.2.1-6 libattr1=1:2.4.48-6 libaudit-common=1:3.0-2 libaudit1=1:3.0-2 libbinutils=2.35.2-2 libblas-dev=3.9.0-3 libblas3=3.9.0-3 libblkid1=2.36.1-7 libboost-python-dev=1.74.0.3 libboost-python1.74-dev=1.74.0-8 libboost-python1.74.0=1.74.0-8 libboost-regex-dev=1.74.0.3 libboost-regex1.74-dev=1.74.0-8 libboost-regex1.74.0=1.74.0-8 libboost-serialization-dev=1.74.0.3 libboost-serialization1.74-dev=1.74.0-8 libboost-serialization1.74.0=1.74.0-8 libboost-test-dev=1.74.0.3 libboost-test1.74-dev=1.74.0-8 libboost-test1.74.0=1.74.0-8 libboost1.74-dev=1.74.0-8 libbz2-1.0=1.0.8-4 libc-bin=2.31-9 libc-dev-bin=2.31-9 libc6=2.31-9 libc6-dev=2.31-9 libcap-ng0=0.7.9-2.2+b1 libcc1-0=10.2.1-6 libcom-err2=1.46.2-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.2-2 libctf0=2.35.2-2 libdb5.3=5.3.28+dfsg1-0.8 libdebconfclient0=0.256 libdebhelper-perl=13.3.4 libdpkg-perl=1.20.7.1 libelf1=0.183-3 libexpat1=2.2.10-2 libexpat1-dev=2.2.10-2 libffi7=3.3-6 libfile-stripnondeterminism-perl=1.11.0-1 libgcc-10-dev=10.2.1-6 libgcc-s1=10.2.1-6 libgcrypt20=1.8.7-3 libgdbm-compat4=1.19-2 libgdbm6=1.19-2 libgfortran-10-dev=10.2.1-6 libgfortran5=10.2.1-6 libgmp10=2:6.2.1+dfsg-1 libgomp1=10.2.1-6 libgpg-error0=1.38-2 libgssapi-krb5-2=1.18.3-4 libhwloc15=2.4.1+dfsg-1 libicu-dev=67.1-6 libicu67=67.1-6 libisl23=0.23-1 libitm1=10.2.1-6 libjs-jquery=3.5.1+dfsg+~3.5.5-7 libjs-sphinxdoc=3.4.3-2 libjs-underscore=1.9.1~dfsg-1 libk5crypto3=1.18.3-4 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-4 libkrb5support0=1.18.3-4 liblapack-dev=3.9.0-3 liblapack3=3.9.0-3 liblsan0=10.2.1-6 liblz4-1=1.9.3-1 liblzma5=5.2.5-2 libmagic-mgc=1:5.39-3 libmagic1=1:5.39-3 libmount1=2.36.1-7 libmpc3=1.2.0-1 libmpdec3=2.5.1-1 libmpfr6=4.1.0-3 libmpich-dev=3.4.1-3 libmpich12=3.4.1-3 libncursesw6=6.2+20201114-2 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libpam-modules=1.4.0-6 libpam-modules-bin=1.4.0-6 libpam-runtime=1.4.0-6 libpam0g=1.4.0-6 libpcre2-8-0=10.36-2 libpcre3=2:8.39-13 libperl5.32=5.32.1-3 libpipeline1=1.5.3-1 libpython3-dev=3.9.2-2 libpython3-stdlib=3.9.2-2 libpython3.9=3.9.2-1 libpython3.9-dev=3.9.2-1 libpython3.9-minimal=3.9.2-1 libpython3.9-stdlib=3.9.2-1 libquadmath0=10.2.1-6 libreadline8=8.1-1 libseccomp2=2.5.1-1 libselinux1=3.1-3 libsigsegv2=2.13-1 libslurm36=20.11.4-1 libsmartcols1=2.36.1-7 libsqlite3-0=3.34.1-3 libssl1.1=1.1.1j-1 libstdc++-10-dev=10.2.1-6 libstdc++6=10.2.1-6 libsub-override-perl=0.09-2 libsystemd0=247.3-2 libtinfo6=6.2+20201114-2 libtirpc-common=1.3.1-1 libtirpc-dev=1.3.1-1 libtirpc3=1.3.1-1 libtool=2.4.6-15 libtsan0=10.2.1-6 libubsan1=10.2.1-6 libuchardet0=0.0.7-1 libudev1=247.3-2 libunistring2=0.9.10-4 libuuid1=2.36.1-7 libxc-dev=4.3.4-2 libxc5=4.3.4-2 libxml2=2.9.10+dfsg-6.3+b1 libzstd1=1.4.8+dfsg-2.1 linux-libc-dev=5.10.19-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-5 make=4.3-4 man-db=2.9.4-2 mawk=1.3.4.20200120-2 media-types=4.0.0 mpich=3.4.1-3 ncurses-base=6.2+20201114-2 ncurses-bin=6.2+20201114-2 patch=2.7.6-7 perl=5.32.1-3 perl-base=5.32.1-3 perl-modules-5.32=5.32.1-3 po-debconf=1.0.21+nmu1 python3=3.9.2-2 python3-dev=3.9.2-2 python3-distutils=3.9.2-1 python3-lib2to3=3.9.2-1 python3-minimal=3.9.2-2 python3.9=3.9.2-1 python3.9-dev=3.9.2-1 python3.9-minimal=3.9.2-1 readline-common=8.1-1 sed=4.7-1 sensible-utils=0.0.14 sysvinit-utils=2.96-6 tar=1.34+dfsg-1 tzdata=2021a-1 util-linux=2.36.1-7 xz-utils=5.2.5-2 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210311T143034Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d bagel=1.2.2-2 && mkdir -p /build/bagel-8uFpDL && dpkg-source --no-check -x /*.dsc /build/bagel-8uFpDL/bagel-1.2.2 && chown -R builduser:builduser /build/bagel-8uFpDL" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/bagel-8uFpDL/bagel-1.2.2 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1615553399" dpkg-buildpackage -uc -a amd64 --build=any" --customize-hook=sync-out /build/bagel-8uFpDL /tmp/bagel-1.2.2-2jcaji67x bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20210311T143034Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.wLzrtNZDs4 as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.wLzrtNZDs4 Reading package lists... Building dependency tree... util-linux is already the newest version (2.36.1-7). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20210311T143034Z unstable/main amd64 libfakeroot amd64 1.25.3-1.1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20210311T143034Z unstable/main amd64 fakeroot amd64 1.25.3-1.1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (687 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4663 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1.1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1.1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1.1_amd64.deb ... Unpacking fakeroot (1.25.3-1.1) ... Setting up libfakeroot:amd64 (1.25.3-1.1) ... Setting up fakeroot (1.25.3-1.1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-9) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20210311T143034Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.wLzrtNZDs4 Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Hit:2 http://snapshot.notset.fr/archive/debian/20210311T143034Z unstable InRelease Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Fetched 22.6 MB in 19s (1163 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.wLzrtNZDs4 I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d bagel=1.2.2-2 && mkdir -p /build/bagel-8uFpDL && dpkg-source --no-check -x /*.dsc /build/bagel-8uFpDL/bagel-1.2.2 && chown -R builduser:builduser /build/bagel-8uFpDL"' exec /tmp/mmdebstrap.wLzrtNZDs4 Reading package lists... NOTICE: 'bagel' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/debichem-team/bagel.git Please use: git clone https://salsa.debian.org/debichem-team/bagel.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 41.6 MB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main bagel 1.2.2-2 (dsc) [2246 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main bagel 1.2.2-2 (tar) [41.6 MB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main bagel 1.2.2-2 (diff) [7440 B] Fetched 41.6 MB in 33s (1259 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'bagel_1.2.2-2.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting bagel in /build/bagel-8uFpDL/bagel-1.2.2 dpkg-source: info: unpacking bagel_1.2.2.orig.tar.gz dpkg-source: info: unpacking bagel_1.2.2-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying skip_failing_testcases.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/bagel-8uFpDL/bagel-1.2.2 && env DEB_BUILD_OPTIONS="parallel=4" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1615553399" dpkg-buildpackage -uc -a amd64 --build=any"' exec /tmp/mmdebstrap.wLzrtNZDs4 dpkg-buildpackage: info: source package bagel dpkg-buildpackage: info: source version 1.2.2-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael Banck dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --max-parallel=1 --with autoreconf debian/rules override_dh_auto_clean make[1]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' dh_auto_clean rm -rf /build/bagel-8uFpDL/bagel-1.2.2/src/testsuite make[1]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' dh_autoreconf_clean -O--max-parallel=1 dh_clean -O--max-parallel=1 debian/rules build-arch dh build-arch --max-parallel=1 --with autoreconf dh_update_autotools_config -a -O--max-parallel=1 dh_autoreconf -a -O--max-parallel=1 libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:17: installing './compile' configure.ac:39: installing './config.guess' configure.ac:39: installing './config.sub' configure.ac:6: installing './install-sh' configure.ac:6: installing './missing' Makefile.am: installing './INSTALL' src/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' if [ -f /proc/meminfo ]; then cat /proc/meminfo; fi MemTotal: 131972616 kB MemFree: 29044744 kB MemAvailable: 77665664 kB Buffers: 1854548 kB Cached: 44243016 kB SwapCached: 222460 kB Active: 11128120 kB Inactive: 86168628 kB Active(anon): 486676 kB Inactive(anon): 50702028 kB Active(file): 10641444 kB Inactive(file): 35466600 kB Unevictable: 0 kB Mlocked: 0 kB SwapTotal: 1003516 kB SwapFree: 38928 kB Dirty: 511376 kB Writeback: 364 kB AnonPages: 50944160 kB Mapped: 828300 kB Shmem: 6784 kB KReclaimable: 3576560 kB Slab: 5028424 kB SReclaimable: 3576560 kB SUnreclaim: 1451864 kB KernelStack: 32032 kB PageTables: 154384 kB NFS_Unstable: 0 kB Bounce: 0 kB WritebackTmp: 0 kB CommitLimit: 66989824 kB Committed_AS: 88120420 kB VmallocTotal: 34359738367 kB VmallocUsed: 168432 kB VmallocChunk: 0 kB Percpu: 122368 kB HardwareCorrupted: 0 kB AnonHugePages: 19843072 kB ShmemHugePages: 0 kB ShmemPmdMapped: 0 kB FileHugePages: 0 kB FilePmdMapped: 0 kB HugePages_Total: 0 HugePages_Free: 0 HugePages_Rsvd: 0 HugePages_Surp: 0 Hugepagesize: 2048 kB Hugetlb: 0 kB DirectMap4k: 20778668 kB DirectMap2M: 111306752 kB DirectMap1G: 2097152 kB dh_auto_configure -- \ --datadir=/usr/share/bagel \ --libdir=/usr/lib/bagel \ --enable-static \ --disable-shared \ --with-boost \ --with-boost-libdir=/usr/lib/x86_64-linux-gnu \ --with-libxc=yes \ --with-mpi=openmpi \ --disable-scalapack \ --enable-smith ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --datadir=/usr/share/bagel --libdir=/usr/lib/bagel --enable-static --disable-shared --with-boost --with-boost-libdir=/usr/lib/x86_64-linux-gnu --with-libxc=yes --with-mpi=openmpi --disable-scalapack --enable-smith checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for python... no checking for python2... no checking for python3... /usr/bin/python3 checking for python version... 3.9 checking for python platform... linux checking for python script directory... ${prefix}/lib/python3.9/site-packages checking for python extension module directory... ${exec_prefix}/lib/python3.9/site-packages checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none ..openmpi requested.. checking for mpicc... mpicc checking for mpicxx... mpicxx checking whether we are using the GNU C compiler... (cached) yes checking whether mpicc accepts -g... (cached) yes checking for mpicc option to accept ISO C89... (cached) none needed checking whether mpicc understands -c and -o together... (cached) yes checking dependency style of mpicc... (cached) none checking whether we are using the GNU C++ compiler... (cached) yes checking whether mpicxx accepts -g... (cached) yes checking dependency style of mpicxx... (cached) none checking whether mpicxx supports C++11 features by default... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from mpicc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... mpicc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mpicc supports -fno-rtti -fno-exceptions... no checking for mpicc option to produce PIC... -fPIC -DPIC checking if mpicc PIC flag -fPIC -DPIC works... yes checking if mpicc static flag -static works... yes checking if mpicc supports -c -o file.o... yes checking if mpicc supports -c -o file.o... 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config.status: creating src/multi/Makefile config.status: creating src/multi/casscf/Makefile config.status: creating src/multi/zcasscf/Makefile config.status: creating src/mat1e/Makefile config.status: creating src/opt/Makefile config.status: creating src/basis/Makefile config.status: creating bagel_config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' dh_auto_build -a -O--max-parallel=1 make -j1 make[1]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' make all-recursive make[2]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' Making all in src make[3]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src' Making all in util make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util' Making all in parallel make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/parallel' /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. 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"libbagel_parallel.la" && ln -s "../libbagel_parallel.la" "libbagel_parallel.la" ) make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/parallel' Making all in io make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/io' /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o moldenin.lo moldenin.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c moldenin.cc -o moldenin.o /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o moldenout.lo moldenout.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c 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mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -DBASIS_DIR=\"/usr/share/bagel\" -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o libbagel_input_la-input.lo `test -f 'input.cc' || echo './'`input.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../../.. -DBASIS_DIR=\"/usr/share/bagel\" -g1 -O2 -DNDEBUG -DZDOT_RETURN -c input.cc -o libbagel_input_la-input.o In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/serialization/shared_ptr.hpp:27, from ../../../src/util/serialization.h:53, from 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Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /bin/bash ../../../libtool --tag=CXX --mode=link mpicxx -I../../.. -DBASIS_DIR=\"/usr/share/bagel\" -g1 -O2 -DNDEBUG -DZDOT_RETURN -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -o libbagel_input.la libbagel_input_la-input.lo -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: ar cr .libs/libbagel_input.a libbagel_input_la-input.o libtool: link: ranlib .libs/libbagel_input.a libtool: link: ( cd ".libs" && rm -f "libbagel_input.la" && ln -s "../libbagel_input.la" "libbagel_input.la" ) make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/input' Making all in math make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/math' /bin/bash ../../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../../.. -Wdate-time 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rys/_breitroot_8.lo rys/_breitroot_9.lo rys/_breitroot_10.lo rys/_breitroot_11.lo rys/_breitroot_12.lo rys/_breitroot_13.lo rys/_spin2root_1.lo rys/_spin2root_2.lo rys/_spin2root_3.lo rys/_spin2root_4.lo rys/_spin2root_5.lo rys/_spin2root_6.lo rys/_spin2root_7.lo rys/_spin2root_8.lo rys/_spin2root_9.lo rys/_spin2root_10.lo rys/_spin2root_11.lo rys/_spin2root_12.lo rys/_spin2root_13.lo compos/complexoverlapbatch.lo compos/covrr.lo compos/complexkineticbatch.lo compos/complexmomentumbatch.lo compos/complexangmombatch.lo compos/point_complexmomentumbatch.lo compos/point_complexoverlapbatch.lo os/point_overlapbatch.lo comprys/complexeribatch.lo rys/eribatch.lo rys/gradbatch.lo rys/gnaibatch.lo rys/slaterbatch.lo rys/breitbatch.lo rys/rysintegral.lo rys/coulombbatch_base.lo rys/coulombbatch_energy.lo rys/compute.lo comprys/ccompute.lo rys/bcompute.lo rys/gcompute.lo rys/gncompute.lo rys/scompute.lo rys/vrr_optim.lo rys/bvrr_optim.lo rys/svrr_optim.lo rys/usvrr_optim.lo rys/naibatch.lo rys/spindipolebatch.lo comprys/complexnaibatch.lo rys/r0batch.lo rys/r1batch.lo rys/r2batch.lo rys/eribatch_base.lo rys/smalleribatch.lo rys/mixederibatch.lo rys/gsmallnaibatch.lo rys/gsmalleribatch.lo comprys/complexsmalleribatch.lo comprys/complexmixederibatch.lo os/overlapbatch.lo os/ovrr.lo os/kineticbatch.lo os/mmbatch.lo os/momentumbatch.lo os/gocompute.lo os/gkcompute.lo os/gmcompute.lo os/osintegral.lo os/angmombatch.lo os/multipolebatch_base.lo os/multipolebatch.lo libint/libint.lo libint/glibint.lo ecp/angularbatch.lo ecp/ecpbatch.lo ecp/radial.lo ecp/soangularbatch.lo ecp/soecpbatch.lo ecp/_sphusp_0.lo ecp/_sphusp_1.lo ecp/_sphusp_2.lo ecp/_sphusp_3.lo ecp/_sphusp_4.lo ecp/_sphusp_5.lo ecp/_sphusp_6.lo ecp/_sphusp_7.lo ecp/_sphusp_8.lo ecp/_sphusp_9.lo ecp/_sphusp_10.lo -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: ar cr .libs/libbagel_integral.a hrrlist.o carsphlist.o sort.o sort_sph.o csort.o csort_sph.o sortlist.o _hrr_20_11.o _hrr_40_31.o _hrr_60_33.o _hrr_70_43.o _hrr_80_44.o _hrr_90_54.o _hrr_a0_64.o _hrr_30_21.o _hrr_50_32.o _hrr_60_42.o _hrr_70_52.o _hrr_80_53.o _hrr_90_63.o _hrr_b0_65.o _hrr_40_22.o _hrr_50_41.o _hrr_60_51.o _hrr_70_61.o _hrr_80_62.o _hrr_a0_55.o _hrr_c0_66.o _hrr_80_71.o _hrr_90_72.o _hrr_a0_73.o _hrr_b0_74.o _hrr_c0_75.o _hrr_d0_76.o _hrr_e0_77.o _carsph_00.o _carsph_10.o _carsph_20.o _carsph_30.o _carsph_40.o _carsph_50.o _carsph_60.o _carsph_70.o _carsph_11.o _carsph_21.o _carsph_31.o _carsph_41.o _carsph_51.o _carsph_61.o _carsph_71.o _carsph_22.o _carsph_32.o _carsph_42.o _carsph_52.o _carsph_62.o _carsph_72.o _carsph_33.o _carsph_43.o _carsph_53.o _carsph_63.o _carsph_73.o _carsph_44.o _carsph_54.o _carsph_64.o _carsph_74.o _carsph_55.o _carsph_65.o _carsph_75.o _carsph_66.o _carsph_76.o _carsph_77.o rys/vrr.o rys/gvrr.o rys/bvrr.o rys/svrr.o rys/usvrr.o rys/s2vrr.o comprys/cvrr.o rys/_eriroot_1.o rys/_eriroot_2.o rys/_eriroot_3.o rys/_eriroot_4.o 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rys/_r2root_12.o rys/_r2root_13.o comprys/_complex_eriroot_1.o comprys/_complex_eriroot_2.o comprys/_complex_eriroot_3.o comprys/_complex_eriroot_4.o comprys/_complex_eriroot_5.o comprys/_complex_eriroot_6.o comprys/_complex_eriroot_7.o comprys/_complex_eriroot_8.o comprys/_complex_eriroot_9.o comprys/_complex_eriroot_10.o comprys/_complex_eriroot_11.o comprys/_complex_eriroot_12.o comprys/_complex_eriroot_13.o rys/_breitroot_1.o rys/_breitroot_2.o rys/_breitroot_3.o rys/_breitroot_4.o rys/_breitroot_5.o rys/_breitroot_6.o rys/_breitroot_7.o rys/_breitroot_8.o rys/_breitroot_9.o rys/_breitroot_10.o rys/_breitroot_11.o rys/_breitroot_12.o rys/_breitroot_13.o rys/_spin2root_1.o rys/_spin2root_2.o rys/_spin2root_3.o rys/_spin2root_4.o rys/_spin2root_5.o rys/_spin2root_6.o rys/_spin2root_7.o rys/_spin2root_8.o rys/_spin2root_9.o rys/_spin2root_10.o rys/_spin2root_11.o rys/_spin2root_12.o rys/_spin2root_13.o compos/complexoverlapbatch.o compos/covrr.o compos/complexkineticbatch.o compos/complexmomentumbatch.o compos/complexangmombatch.o compos/point_complexmomentumbatch.o compos/point_complexoverlapbatch.o os/point_overlapbatch.o comprys/complexeribatch.o rys/eribatch.o rys/gradbatch.o rys/gnaibatch.o rys/slaterbatch.o rys/breitbatch.o rys/rysintegral.o rys/coulombbatch_base.o rys/coulombbatch_energy.o rys/compute.o comprys/ccompute.o rys/bcompute.o rys/gcompute.o rys/gncompute.o rys/scompute.o rys/vrr_optim.o rys/bvrr_optim.o rys/svrr_optim.o rys/usvrr_optim.o rys/naibatch.o rys/spindipolebatch.o comprys/complexnaibatch.o rys/r0batch.o rys/r1batch.o rys/r2batch.o rys/eribatch_base.o rys/smalleribatch.o rys/mixederibatch.o rys/gsmallnaibatch.o rys/gsmalleribatch.o comprys/complexsmalleribatch.o comprys/complexmixederibatch.o os/overlapbatch.o os/ovrr.o os/kineticbatch.o os/mmbatch.o os/momentumbatch.o os/gocompute.o os/gkcompute.o os/gmcompute.o os/osintegral.o os/angmombatch.o os/multipolebatch_base.o os/multipolebatch.o libint/libint.o libint/glibint.o ecp/angularbatch.o ecp/ecpbatch.o ecp/radial.o ecp/soangularbatch.o ecp/soecpbatch.o ecp/_sphusp_0.o ecp/_sphusp_1.o ecp/_sphusp_2.o ecp/_sphusp_3.o ecp/_sphusp_4.o ecp/_sphusp_5.o ecp/_sphusp_6.o ecp/_sphusp_7.o ecp/_sphusp_8.o ecp/_sphusp_9.o ecp/_sphusp_10.o libtool: link: ranlib .libs/libbagel_integral.a libtool: link: ( cd ".libs" && rm -f "libbagel_integral.la" && ln -s "../libbagel_integral.la" "libbagel_integral.la" ) make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/integral' Making all in df make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/df' /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o dfblock.lo dfblock.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c dfblock.cc -o dfblock.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o df.lo df.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c df.cc -o df.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o dfdistt.lo dfdistt.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c dfdistt.cc -o dfdistt.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o paralleldf.lo paralleldf.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c paralleldf.cc -o paralleldf.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o complexdf.lo complexdf.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c complexdf.cc -o complexdf.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o complexdf_base.lo complexdf_base.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c complexdf_base.cc -o complexdf_base.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o reldf.lo reldf.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c reldf.cc -o reldf.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o reldfhalf.lo reldfhalf.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c reldfhalf.cc -o reldfhalf.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o reldffull.lo reldffull.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c reldffull.cc -o reldffull.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o reldffullt.lo reldffullt.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c reldffullt.cc -o reldffullt.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o relcdmatrix.lo relcdmatrix.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c relcdmatrix.cc -o relcdmatrix.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o breit2index.lo breit2index.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c breit2index.cc -o breit2index.o /bin/bash ../../libtool --tag=CXX --mode=link mpicxx -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -o libbagel_df.la dfblock.lo df.lo dfdistt.lo paralleldf.lo complexdf.lo complexdf_base.lo reldf.lo reldfhalf.lo reldffull.lo reldffullt.lo relcdmatrix.lo breit2index.lo -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: ar cr .libs/libbagel_df.a dfblock.o df.o dfdistt.o paralleldf.o complexdf.o complexdf_base.o reldf.o reldfhalf.o reldffull.o reldffullt.o relcdmatrix.o breit2index.o libtool: link: ranlib .libs/libbagel_df.a libtool: link: ( cd ".libs" && rm -f "libbagel_df.la" && ln -s "../libbagel_df.la" "libbagel_df.la" ) make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/df' Making all in opt make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/opt' /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o optimize.lo optimize.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c optimize.cc -o optimize.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o opt.lo opt.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c opt.cc -o opt.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o get_grad.lo get_grad.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN 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compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c compute_mep.cc -o compute_mep.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o update.lo update.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c update.cc -o update.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o qmmm.lo qmmm.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c qmmm.cc -o qmmm.o qmmm.cc: In member function ‘void bagel::QMMM_Tinker::edit_tinker_input(std::shared_ptr) const’: qmmm.cc:39:9: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 39 | system("mv -f tinkin.xyz tinkin.xyz.old"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qmmm.cc: In member function ‘virtual void bagel::QMMM_Tinker::edit_input(std::shared_ptr) const’: qmmm.cc:73:8: warning: ignoring return value of ‘int chdir(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 73 | chdir("tinker1"); | ~~~~~^~~~~~~~~~~ qmmm.cc:77:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 77 | system("testgrad -k tinkin.key tinkin.xyz y n n > gradientls"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qmmm.cc:78:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 78 | system("grep 'Total Potential' gradientls | cut -c 29- > ../energy_qmmm"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qmmm.cc:82:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 82 | system(pp.c_str()); | ~~~~~~^~~~~~~~~~~~ qmmm.cc:85:8: warning: ignoring return value of ‘int chdir(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 85 | chdir("../"); | ~~~~~^~~~~~~ qmmm.cc:87:8: warning: ignoring return value of ‘int chdir(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 87 | chdir("tinker2"); | ~~~~~^~~~~~~~~~~ qmmm.cc:91:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 91 | system("testgrad -k tinkin.key tinkin.xyz y n n > gradientls"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qmmm.cc:92:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 92 | system("grep 'Total Potential' gradientls | cut -c 29- > ../energy_qm"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ qmmm.cc:96:11: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 96 | system(pp.c_str()); | ~~~~~~^~~~~~~~~~~~ qmmm.cc:99:8: warning: ignoring return value of ‘int chdir(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 99 | chdir("../"); | ~~~~~^~~~~~~ /bin/bash ../../libtool --tag=CXX --mode=link mpicxx -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -o libbagel_opt.la optimize.lo opt.lo get_grad.lo constraint.lo compute_opt.lo compute_mep.lo update.lo qmmm.lo -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: ar cr .libs/libbagel_opt.a optimize.o opt.o get_grad.o constraint.o compute_opt.o compute_mep.o update.o qmmm.o libtool: 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cpcasscf.o gradtask.o force.o finite.o hess.o dkhgrad.o libtool: link: ranlib .libs/libbagel_grad.a libtool: link: ( cd ".libs" && rm -f "libbagel_grad.la" && ln -s "../libbagel_grad.la" "libbagel_grad.la" ) make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/grad' Making all in pt2 make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/pt2' /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o mp2/mp2.lo mp2/mp2.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c mp2/mp2.cc -o mp2/mp2.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o mp2/mp2grad.lo mp2/mp2grad.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time 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caspt2/SPCASPT2_tasks3.lo caspt2/SPCASPT2_tasks4.lo caspt2/SPCASPT2_tasks5.lo caspt2/SPCASPT2_tasks6.lo caspt2/MSCASPT2.lo caspt2/MSCASPT2_gamma.lo caspt2/MSCASPT2_densityq.lo caspt2/MSCASPT2_density1q.lo caspt2/MSCASPT2_density2q.lo caspt2/MSCASPT2_deciq.lo caspt2/MSCASPT2_deci2q.lo caspt2/MSCASPT2_deci3q.lo caspt2/MSCASPT2_deci4q.lo caspt2/MSCASPT2_gen1.lo caspt2/MSCASPT2_gen2.lo caspt2/MSCASPT2_gen3.lo caspt2/MSCASPT2_gen4.lo caspt2/MSCASPT2_gen5.lo caspt2/MSCASPT2_gen6.lo caspt2/MSCASPT2_gen7.lo caspt2/MSCASPT2_gen8.lo caspt2/MSCASPT2_gen9.lo caspt2/MSCASPT2_gen10.lo caspt2/MSCASPT2_gen11.lo caspt2/MSCASPT2_gen12.lo caspt2/MSCASPT2_tasks1.lo caspt2/MSCASPT2_tasks2.lo caspt2/MSCASPT2_tasks3.lo caspt2/MSCASPT2_tasks4.lo caspt2/MSCASPT2_tasks5.lo caspt2/MSCASPT2_tasks6.lo caspt2/MSCASPT2_tasks7.lo caspt2/MSCASPT2_tasks8.lo caspt2/MSCASPT2_tasks9.lo caspt2/MSCASPT2_tasks10.lo caspt2/MSCASPT2_tasks11.lo caspt2/MSCASPT2_tasks12.lo caspt2/MSCASPT2_shift.lo caspt2/MSCASPT2_contract.lo mrci/MRCI.lo mrci/MRCI_gamma.lo mrci/MRCI_sourceq.lo mrci/MRCI_normq.lo mrci/MRCI_residualq1.lo mrci/MRCI_residualq2.lo mrci/MRCI_residualq3.lo mrci/MRCI_residualq4.lo mrci/MRCI_residualq5.lo mrci/MRCI_residualq6.lo mrci/MRCI_residualq7.lo mrci/MRCI_residualq8.lo mrci/MRCI_residualq9.lo mrci/MRCI_tasks1.lo mrci/MRCI_tasks2.lo mrci/MRCI_tasks3.lo mrci/MRCI_tasks4.lo mrci/MRCI_tasks5.lo mrci/MRCI_tasks6.lo mrci/MRCI_tasks7.lo mrci/MRCI_tasks8.lo mrci/MRCI_tasks9.lo mrci/MRCI_tasks10.lo mrci/MRCI_tasks11.lo mrci/MRCI_tasks12.lo mrci/MRCI_tasks13.lo mrci/MRCI_tasks14.lo mrci/MRCI_tasks15.lo mrci/MRCI_tasks16.lo mrci/MRCI_tasks17.lo mrci/MRCI_tasks18.lo mrci/MRCI_tasks19.lo mrci/MRCI_tasks20.lo mrci/MRCI_gen1.lo mrci/MRCI_gen2.lo mrci/MRCI_gen3.lo mrci/MRCI_gen4.lo mrci/MRCI_gen5.lo mrci/MRCI_gen6.lo mrci/MRCI_gen7.lo mrci/MRCI_gen8.lo mrci/MRCI_gen9.lo mrci/MRCI_gen10.lo mrci/MRCI_gen11.lo mrci/MRCI_gen12.lo mrci/MRCI_gen13.lo mrci/MRCI_gen14.lo mrci/MRCI_gen15.lo mrci/MRCI_gen16.lo mrci/MRCI_gen17.lo mrci/MRCI_gen18.lo mrci/MRCI_gen19.lo mrci/MRCI_gen20.lo relcaspt2/RelCASPT2.lo relcaspt2/RelCASPT2_gamma.lo relcaspt2/RelCASPT2_residualq.lo relcaspt2/RelCASPT2_normq.lo relcaspt2/RelCASPT2_sourceq.lo relcaspt2/RelCASPT2_gen1.lo relcaspt2/RelCASPT2_gen2.lo relcaspt2/RelCASPT2_gen3.lo relcaspt2/RelCASPT2_gen4.lo relcaspt2/RelCASPT2_gen5.lo relcaspt2/RelCASPT2_gen6.lo relcaspt2/RelCASPT2_tasks1.lo relcaspt2/RelCASPT2_tasks2.lo relcaspt2/RelCASPT2_tasks3.lo relcaspt2/RelCASPT2_tasks4.lo relcaspt2/RelCASPT2_tasks5.lo relcaspt2/RelCASPT2_tasks6.lo casa/CASA.lo casa/CASA_gamma.lo casa/CASA_residualq.lo casa/CASA_sourceq.lo casa/CASA_gen1.lo casa/CASA_gen2.lo casa/CASA_gen3.lo casa/CASA_gen4.lo casa/CASA_gen5.lo casa/CASA_gen6.lo casa/CASA_tasks1.lo casa/CASA_tasks2.lo casa/CASA_tasks3.lo casa/CASA_tasks4.lo casa/CASA_tasks5.lo casa/CASA_tasks6.lo relcasa/RelCASA.lo relcasa/RelCASA_gamma.lo relcasa/RelCASA_residualq.lo relcasa/RelCASA_sourceq.lo relcasa/RelCASA_gen1.lo 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relmrci/RelMRCI_gen2.lo relmrci/RelMRCI_gen3.lo relmrci/RelMRCI_gen4.lo relmrci/RelMRCI_gen5.lo relmrci/RelMRCI_gen6.lo relmrci/RelMRCI_gen7.lo relmrci/RelMRCI_gen8.lo relmrci/RelMRCI_gen9.lo relmrci/RelMRCI_gen10.lo relmrci/RelMRCI_gen11.lo relmrci/RelMRCI_gen12.lo relmrci/RelMRCI_gen13.lo relmrci/RelMRCI_gen14.lo relmrci/RelMRCI_gen15.lo relmrci/RelMRCI_gen16.lo -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: ar cr .libs/libbagel_smith.a smith_info.o indexrange.o storage.o storagekramers.o denom.o tensor.o futuretensor.o multitensor.o spinfreebase.o subtask.o smith.o caspt2energy.o caspt2grad.o caspt2grad_util.o moint.o diagonal.o queue.o orthogonal.o orthogonal_shift.o caspt2/CASPT2.o caspt2/CASPT2_gamma.o caspt2/CASPT2_normq.o caspt2/CASPT2_sourceq.o caspt2/CASPT2_density1q.o caspt2/CASPT2_density2q.o caspt2/CASPT2_deciq.o caspt2/CASPT2_residualq.o caspt2/CASPT2_densityq.o caspt2/CASPT2_tasks1.o caspt2/CASPT2_tasks2.o caspt2/CASPT2_tasks3.o caspt2/CASPT2_tasks4.o caspt2/CASPT2_tasks5.o caspt2/CASPT2_tasks6.o caspt2/CASPT2_tasks7.o caspt2/CASPT2_tasks8.o caspt2/CASPT2_tasks9.o caspt2/CASPT2_tasks10.o caspt2/CASPT2_tasks11.o caspt2/CASPT2_tasks12.o caspt2/CASPT2_tasks13.o caspt2/CASPT2_tasks14.o caspt2/CASPT2_tasks15.o caspt2/CASPT2_tasks16.o caspt2/CASPT2_gen1.o caspt2/CASPT2_gen2.o caspt2/CASPT2_gen3.o caspt2/CASPT2_gen4.o caspt2/CASPT2_gen5.o caspt2/CASPT2_gen6.o caspt2/CASPT2_gen7.o caspt2/CASPT2_gen8.o caspt2/CASPT2_gen9.o caspt2/CASPT2_gen10.o caspt2/CASPT2_gen11.o caspt2/CASPT2_gen12.o caspt2/CASPT2_gen13.o caspt2/CASPT2_gen14.o caspt2/CASPT2_gen15.o caspt2/CASPT2_gen16.o caspt2/CASPT2_contract.o caspt2/SPCASPT2.o caspt2/SPCASPT2_gamma.o caspt2/SPCASPT2_densityq.o caspt2/SPCASPT2_density1q.o caspt2/SPCASPT2_gen1.o caspt2/SPCASPT2_gen2.o caspt2/SPCASPT2_gen3.o caspt2/SPCASPT2_gen4.o caspt2/SPCASPT2_gen5.o caspt2/SPCASPT2_gen6.o caspt2/SPCASPT2_tasks1.o caspt2/SPCASPT2_tasks2.o caspt2/SPCASPT2_tasks3.o caspt2/SPCASPT2_tasks4.o caspt2/SPCASPT2_tasks5.o caspt2/SPCASPT2_tasks6.o caspt2/MSCASPT2.o caspt2/MSCASPT2_gamma.o caspt2/MSCASPT2_densityq.o caspt2/MSCASPT2_density1q.o caspt2/MSCASPT2_density2q.o caspt2/MSCASPT2_deciq.o caspt2/MSCASPT2_deci2q.o caspt2/MSCASPT2_deci3q.o caspt2/MSCASPT2_deci4q.o caspt2/MSCASPT2_gen1.o caspt2/MSCASPT2_gen2.o caspt2/MSCASPT2_gen3.o caspt2/MSCASPT2_gen4.o caspt2/MSCASPT2_gen5.o caspt2/MSCASPT2_gen6.o caspt2/MSCASPT2_gen7.o caspt2/MSCASPT2_gen8.o caspt2/MSCASPT2_gen9.o caspt2/MSCASPT2_gen10.o caspt2/MSCASPT2_gen11.o caspt2/MSCASPT2_gen12.o caspt2/MSCASPT2_tasks1.o caspt2/MSCASPT2_tasks2.o caspt2/MSCASPT2_tasks3.o caspt2/MSCASPT2_tasks4.o caspt2/MSCASPT2_tasks5.o caspt2/MSCASPT2_tasks6.o caspt2/MSCASPT2_tasks7.o caspt2/MSCASPT2_tasks8.o caspt2/MSCASPT2_tasks9.o caspt2/MSCASPT2_tasks10.o caspt2/MSCASPT2_tasks11.o caspt2/MSCASPT2_tasks12.o caspt2/MSCASPT2_shift.o caspt2/MSCASPT2_contract.o mrci/MRCI.o mrci/MRCI_gamma.o mrci/MRCI_sourceq.o mrci/MRCI_normq.o mrci/MRCI_residualq1.o mrci/MRCI_residualq2.o mrci/MRCI_residualq3.o mrci/MRCI_residualq4.o mrci/MRCI_residualq5.o mrci/MRCI_residualq6.o mrci/MRCI_residualq7.o mrci/MRCI_residualq8.o mrci/MRCI_residualq9.o mrci/MRCI_tasks1.o mrci/MRCI_tasks2.o mrci/MRCI_tasks3.o mrci/MRCI_tasks4.o mrci/MRCI_tasks5.o mrci/MRCI_tasks6.o mrci/MRCI_tasks7.o mrci/MRCI_tasks8.o mrci/MRCI_tasks9.o mrci/MRCI_tasks10.o mrci/MRCI_tasks11.o mrci/MRCI_tasks12.o mrci/MRCI_tasks13.o mrci/MRCI_tasks14.o mrci/MRCI_tasks15.o mrci/MRCI_tasks16.o mrci/MRCI_tasks17.o mrci/MRCI_tasks18.o mrci/MRCI_tasks19.o mrci/MRCI_tasks20.o mrci/MRCI_gen1.o mrci/MRCI_gen2.o mrci/MRCI_gen3.o mrci/MRCI_gen4.o mrci/MRCI_gen5.o mrci/MRCI_gen6.o mrci/MRCI_gen7.o mrci/MRCI_gen8.o mrci/MRCI_gen9.o mrci/MRCI_gen10.o mrci/MRCI_gen11.o mrci/MRCI_gen12.o mrci/MRCI_gen13.o mrci/MRCI_gen14.o mrci/MRCI_gen15.o mrci/MRCI_gen16.o mrci/MRCI_gen17.o mrci/MRCI_gen18.o mrci/MRCI_gen19.o mrci/MRCI_gen20.o relcaspt2/RelCASPT2.o relcaspt2/RelCASPT2_gamma.o relcaspt2/RelCASPT2_residualq.o relcaspt2/RelCASPT2_normq.o relcaspt2/RelCASPT2_sourceq.o relcaspt2/RelCASPT2_gen1.o relcaspt2/RelCASPT2_gen2.o relcaspt2/RelCASPT2_gen3.o relcaspt2/RelCASPT2_gen4.o relcaspt2/RelCASPT2_gen5.o relcaspt2/RelCASPT2_gen6.o relcaspt2/RelCASPT2_tasks1.o relcaspt2/RelCASPT2_tasks2.o relcaspt2/RelCASPT2_tasks3.o relcaspt2/RelCASPT2_tasks4.o relcaspt2/RelCASPT2_tasks5.o relcaspt2/RelCASPT2_tasks6.o casa/CASA.o casa/CASA_gamma.o casa/CASA_residualq.o casa/CASA_sourceq.o casa/CASA_gen1.o casa/CASA_gen2.o casa/CASA_gen3.o casa/CASA_gen4.o casa/CASA_gen5.o casa/CASA_gen6.o casa/CASA_tasks1.o casa/CASA_tasks2.o casa/CASA_tasks3.o casa/CASA_tasks4.o casa/CASA_tasks5.o casa/CASA_tasks6.o relcasa/RelCASA.o relcasa/RelCASA_gamma.o relcasa/RelCASA_residualq.o relcasa/RelCASA_sourceq.o relcasa/RelCASA_gen1.o relcasa/RelCASA_gen2.o relcasa/RelCASA_gen3.o relcasa/RelCASA_gen4.o relcasa/RelCASA_gen5.o relcasa/RelCASA_gen6.o relcasa/RelCASA_tasks1.o relcasa/RelCASA_tasks2.o relcasa/RelCASA_tasks3.o relcasa/RelCASA_tasks4.o relcasa/RelCASA_tasks5.o relcasa/RelCASA_tasks6.o relmrci/RelMRCI.o relmrci/RelMRCI_gamma.o relmrci/RelMRCI_sourceq.o relmrci/RelMRCI_normq.o relmrci/RelMRCI_residualq1.o relmrci/RelMRCI_residualq2.o relmrci/RelMRCI_residualq3.o relmrci/RelMRCI_residualq4.o relmrci/RelMRCI_residualq5.o relmrci/RelMRCI_residualq6.o relmrci/RelMRCI_tasks1.o relmrci/RelMRCI_tasks2.o relmrci/RelMRCI_tasks3.o relmrci/RelMRCI_tasks4.o relmrci/RelMRCI_tasks5.o relmrci/RelMRCI_tasks6.o relmrci/RelMRCI_tasks7.o relmrci/RelMRCI_tasks8.o relmrci/RelMRCI_tasks9.o relmrci/RelMRCI_tasks10.o relmrci/RelMRCI_tasks11.o relmrci/RelMRCI_tasks12.o relmrci/RelMRCI_tasks13.o relmrci/RelMRCI_tasks14.o relmrci/RelMRCI_tasks15.o relmrci/RelMRCI_tasks16.o relmrci/RelMRCI_gen1.o relmrci/RelMRCI_gen2.o relmrci/RelMRCI_gen3.o relmrci/RelMRCI_gen4.o relmrci/RelMRCI_gen5.o relmrci/RelMRCI_gen6.o relmrci/RelMRCI_gen7.o relmrci/RelMRCI_gen8.o relmrci/RelMRCI_gen9.o relmrci/RelMRCI_gen10.o relmrci/RelMRCI_gen11.o relmrci/RelMRCI_gen12.o relmrci/RelMRCI_gen13.o relmrci/RelMRCI_gen14.o relmrci/RelMRCI_gen15.o relmrci/RelMRCI_gen16.o libtool: link: ranlib .libs/libbagel_smith.a libtool: link: ( cd ".libs" && rm -f "libbagel_smith.la" && ln -s "../libbagel_smith.la" "libbagel_smith.la" ) make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/smith' Making all in prop make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/prop' /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o multipole.lo multipole.cc libtool: compile: mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I../.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c multipole.cc -o multipole.o /bin/bash ../../libtool --tag=CXX --mode=compile mpicxx -DHAVE_CONFIG_H -I. -I../.. -Wdate-time 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"/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dimer/.libs/libbagel_dimer.a") libtool: link: (cd .libs/libbagel.lax/libbagel_multisite.a && ar x "/build/bagel-8uFpDL/bagel-1.2.2/src/asd/multisite/.libs/libbagel_multisite.a") libtool: link: (cd .libs/libbagel.lax/libbagel_ciutil.a && ar x "/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ciutil/.libs/libbagel_ciutil.a") libtool: link: (cd .libs/libbagel.lax/libbagel_mat1e.a && ar x "/build/bagel-8uFpDL/bagel-1.2.2/src/mat1e/.libs/libbagel_mat1e.a") libtool: link: (cd .libs/libbagel.lax/libbagel_integral.a && ar x "/build/bagel-8uFpDL/bagel-1.2.2/src/integral/.libs/libbagel_integral.a") libtool: link: (cd .libs/libbagel.lax/libbagel_molecule.a && ar x "/build/bagel-8uFpDL/bagel-1.2.2/src/molecule/.libs/libbagel_molecule.a") libtool: link: (cd .libs/libbagel.lax/libbagel_io.a && ar x "/build/bagel-8uFpDL/bagel-1.2.2/src/util/io/.libs/libbagel_io.a") libtool: link: (cd .libs/libbagel.lax/libbagel_util.a && ar x "/build/bagel-8uFpDL/bagel-1.2.2/src/util/.libs/libbagel_util.a") libtool: link: (cd .libs/libbagel.lax/libbagel_parallel.a && ar x "/build/bagel-8uFpDL/bagel-1.2.2/src/util/parallel/.libs/libbagel_parallel.a") libtool: link: (cd .libs/libbagel.lax/libbagel_math.a && ar x "/build/bagel-8uFpDL/bagel-1.2.2/src/util/math/.libs/libbagel_math.a") libtool: link: (cd .libs/libbagel.lax/libbagel_input.a && ar x "/build/bagel-8uFpDL/bagel-1.2.2/src/util/input/.libs/libbagel_input.a") copying selected object files to avoid basename conflicts... libtool: link: ln .libs/libbagel.lax/libbagel_ras.a/determinants.o .libs/libbagel.lax/lt1-determinants.o || cp .libs/libbagel.lax/libbagel_ras.a/determinants.o .libs/libbagel.lax/lt1-determinants.o libtool: link: ln .libs/libbagel.lax/libbagel_asd_dmrg.a/form_sigma.o .libs/libbagel.lax/lt2-form_sigma.o || cp .libs/libbagel.lax/libbagel_asd_dmrg.a/form_sigma.o .libs/libbagel.lax/lt2-form_sigma.o libtool: link: ar cr .libs/libbagel.a run_bagel.o static.o 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.libs/libbagel.lax/libbagel_math.a/distmatrix.o .libs/libbagel.lax/libbagel_math.a/distmatrix_base.o .libs/libbagel.lax/libbagel_math.a/distzmatrix.o .libs/libbagel.lax/libbagel_math.a/jacobi.o .libs/libbagel.lax/libbagel_math.a/lt1-transpose.o .libs/libbagel.lax/libbagel_math.a/matrix.o .libs/libbagel.lax/libbagel_math.a/matrix_base.o .libs/libbagel.lax/libbagel_math.a/matview.o .libs/libbagel.lax/libbagel_math.a/preallocarray.o .libs/libbagel.lax/libbagel_math.a/quatern.o .libs/libbagel.lax/libbagel_math.a/sparsematrix.o .libs/libbagel.lax/libbagel_math.a/sphharmonics.o .libs/libbagel.lax/libbagel_math.a/transpose.o .libs/libbagel.lax/libbagel_math.a/unblocked.o .libs/libbagel.lax/libbagel_math.a/xyzfile.o .libs/libbagel.lax/libbagel_math.a/zmatrix.o .libs/libbagel.lax/libbagel_math.a/zquatev.o .libs/libbagel.lax/libbagel_math.a/ztranspose.o .libs/libbagel.lax/libbagel_input.a/libbagel_input_la-input.o libtool: link: ranlib .libs/libbagel.a libtool: link: rm -fr .libs/libbagel.lax .libs/libbagel.lax libtool: link: ( cd ".libs" && rm -f "libbagel.la" && ln -s "../libbagel.la" "libbagel.la" ) /bin/bash ../libtool --tag=CXX --mode=link mpicxx -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -o BAGEL main.o libbagel.la opt/libbagel_opt.la multi/zcasscf/libbagel_zcasscf.la ci/zfci/libbagel_zfci.la ci/fci/libbagel_fci.la ci/ras/libbagel_ras.la response/libbagel_response.la scf/libbagel_scf.la multi/casscf/libbagel_casscf.la pt2/libbagel_pt2.la grad/libbagel_grad.la wfn/libbagel_wfn.la df/libbagel_df.la smith/libbagel_smith.la prop/libbagel_prop.la asd/libbagel_asd.la asd/dmrg/libbagel_asd_dmrg.la asd/orbital/libbagel_asd_orbital.la asd/dimer/libbagel_dimer.la asd/multisite/libbagel_multisite.la ci/ciutil/libbagel_ciutil.la mat1e/libbagel_mat1e.la integral/libbagel_integral.la molecule/libbagel_molecule.la util/io/libbagel_io.la util/libbagel_util.la util/parallel/libbagel_parallel.la util/math/libbagel_math.la util/input/libbagel_input.la -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: mpicxx -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -Wl,-z -Wl,relro -o BAGEL main.o -L/usr/lib/x86_64-linux-gnu ./.libs/libbagel.a opt/.libs/libbagel_opt.a multi/zcasscf/.libs/libbagel_zcasscf.a ci/zfci/.libs/libbagel_zfci.a ci/fci/.libs/libbagel_fci.a ci/ras/.libs/libbagel_ras.a response/.libs/libbagel_response.a scf/.libs/libbagel_scf.a multi/casscf/.libs/libbagel_casscf.a pt2/.libs/libbagel_pt2.a grad/.libs/libbagel_grad.a wfn/.libs/libbagel_wfn.a df/.libs/libbagel_df.a smith/.libs/libbagel_smith.a prop/.libs/libbagel_prop.a asd/.libs/libbagel_asd.a asd/dmrg/.libs/libbagel_asd_dmrg.a asd/orbital/.libs/libbagel_asd_orbital.a asd/dimer/.libs/libbagel_dimer.a asd/multisite/.libs/libbagel_multisite.a ci/ciutil/.libs/libbagel_ciutil.a mat1e/.libs/libbagel_mat1e.a integral/.libs/libbagel_integral.a molecule/.libs/libbagel_molecule.a util/io/.libs/libbagel_io.a util/.libs/libbagel_util.a util/parallel/.libs/libbagel_parallel.a util/math/.libs/libbagel_math.a util/input/.libs/libbagel_input.a -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src' make[3]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src' make[3]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' make[3]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' make[2]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' make[1]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' debian/rules override_dh_auto_test make[1]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' dh_auto_test make -j1 check VERBOSE=1 make[2]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' Making check in src make[3]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src' Making check in util make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util' Making check in parallel make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/parallel' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/parallel' Making check in io make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/io' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/io' Making check in input make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/input' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/input' Making check in math make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/math' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/math' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util' make[5]: Nothing to be done for 'check-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util' Making check in molecule make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/molecule' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/molecule' Making check in integral make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/integral' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/integral' Making check in df make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/df' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/df' Making check in opt make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/opt' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/opt' Making check in grad make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/grad' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/grad' Making check in pt2 make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/pt2' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/pt2' Making check in wfn make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/wfn' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/wfn' Making check in scf make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/scf' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/scf' Making check in multi make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi' Making check in casscf make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/casscf' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/casscf' Making check in zcasscf make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/zcasscf' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/zcasscf' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi' make[5]: Nothing to be done for 'check-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi' Making check in smith make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/smith' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/smith' Making check in prop make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/prop' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/prop' Making check in ci make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci' Making check in ciutil make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ciutil' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ciutil' Making check in fci make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/fci' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/fci' Making check in ras make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ras' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ras' Making check in zfci make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/zfci' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/zfci' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci' make[5]: Nothing to be done for 'check-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci' Making check in response make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/response' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/response' Making check in asd make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd' Making check in dmrg make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dmrg' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dmrg' Making check in dimer make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dimer' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dimer' Making check in multisite make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/multisite' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/multisite' Making check in orbital make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/orbital' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/orbital' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd' make[5]: Nothing to be done for 'check-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd' Making check in mat1e make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/mat1e' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/mat1e' Making check in basis make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/basis' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/basis' make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src' make TestSuite make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src' mpicxx -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -c -o test_main.o test_main.cc /bin/bash ../libtool --tag=CXX --mode=link mpicxx -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -L/usr/lib/x86_64-linux-gnu -Wl,-z,relro -o TestSuite test_main.o libbagel.la opt/libbagel_opt.la multi/zcasscf/libbagel_zcasscf.la ci/zfci/libbagel_zfci.la ci/fci/libbagel_fci.la ci/ras/libbagel_ras.la response/libbagel_response.la scf/libbagel_scf.la multi/casscf/libbagel_casscf.la pt2/libbagel_pt2.la grad/libbagel_grad.la wfn/libbagel_wfn.la df/libbagel_df.la smith/libbagel_smith.la prop/libbagel_prop.la asd/libbagel_asd.la asd/dmrg/libbagel_asd_dmrg.la asd/orbital/libbagel_asd_orbital.la asd/dimer/libbagel_dimer.la asd/multisite/libbagel_multisite.la ci/ciutil/libbagel_ciutil.la mat1e/libbagel_mat1e.la integral/libbagel_integral.la molecule/libbagel_molecule.la util/io/libbagel_io.la util/libbagel_util.la util/parallel/libbagel_parallel.la util/math/libbagel_math.la util/input/libbagel_input.la -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread libtool: link: mpicxx -I.. -g1 -O2 -DNDEBUG -DZDOT_RETURN -Wl,-z -Wl,relro -o TestSuite test_main.o -L/usr/lib/x86_64-linux-gnu ./.libs/libbagel.a opt/.libs/libbagel_opt.a multi/zcasscf/.libs/libbagel_zcasscf.a ci/zfci/.libs/libbagel_zfci.a ci/fci/.libs/libbagel_fci.a ci/ras/.libs/libbagel_ras.a response/.libs/libbagel_response.a scf/.libs/libbagel_scf.a multi/casscf/.libs/libbagel_casscf.a pt2/.libs/libbagel_pt2.a grad/.libs/libbagel_grad.a wfn/.libs/libbagel_wfn.a df/.libs/libbagel_df.a smith/.libs/libbagel_smith.a prop/.libs/libbagel_prop.a asd/.libs/libbagel_asd.a asd/dmrg/.libs/libbagel_asd_dmrg.a asd/orbital/.libs/libbagel_asd_orbital.a asd/dimer/.libs/libbagel_dimer.a asd/multisite/.libs/libbagel_multisite.a ci/ciutil/.libs/libbagel_ciutil.a mat1e/.libs/libbagel_mat1e.a integral/.libs/libbagel_integral.a molecule/.libs/libbagel_molecule.a util/io/.libs/libbagel_io.a util/.libs/libbagel_util.a util/parallel/.libs/libbagel_parallel.a util/math/.libs/libbagel_math.a util/input/.libs/libbagel_input.a -lxc -lboost_regex -lboost_unit_test_framework -lboost_serialization -lblas -llapack -lpthread make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src' make[3]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src' make[3]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' make[3]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' make[2]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' mkdir -p /build/bagel-8uFpDL/bagel-1.2.2/src/testsuite (cd /build/bagel-8uFpDL/bagel-1.2.2/src/testsuite; ../TestSuite --log_level=all) 4426a840c906 Running 31 test cases... Entering test module "Suites" ../src/testimpl/test_scf.cc(84): Entering test suite "TEST_SCF" ../src/testimpl/test_scf.cc(86): Entering test case "DF_HF" ../src/testimpl/test_scf.cc(87): info: check compare(scf_energy("hf_svp_hf"), -99.84779026) has passed ../src/testimpl/test_scf.cc(88): info: check compare(scf_energy("hf_svp_dfhf"), -99.84772354) has passed ../src/testimpl/test_scf.cc(90): info: check compare(scf_energy("hf_svp_dfhf_restart"),-99.84772354) has passed ../src/testimpl/test_scf.cc(92): info: check compare(scf_energy("hf_svp_dfhf_ext"), -99.83765614) has passed ../src/testimpl/test_scf.cc(93): info: check compare(scf_energy("hf_svp_dfhf_cart"), -99.84911270) has passed ../src/testimpl/test_scf.cc(94): info: check compare(scf_energy("hf_svp_dfhf_charge"), -99.78567137) has passed ../src/testimpl/test_scf.cc(95): info: check compare(scf_energy("hf_svp_dfhf_dkh"), -99.92869677) has passed ../src/testimpl/test_scf.cc(96): info: check compare(scf_energy("hf_mix_dfhf"), -99.83889193) has passed ../src/testimpl/test_scf.cc(97): info: check compare(scf_energy("hf_mix2_dfhf"), -99.83889193) has passed ../src/testimpl/test_scf.cc(98): info: check compare(scf_energy("oh_svp_uhf"), -75.28410147) has passed ../src/testimpl/test_scf.cc(99): info: check compare(scf_energy("hc_svp_rohf"), -38.16810629) has passed ../src/testimpl/test_scf.cc(100): info: check compare(scf_energy("hf_new_dfhf"), -99.97989929) has passed ../src/testimpl/test_scf.cc(101): info: check compare(scf_energy("hcl_svp_dfhf"), -459.93784632) has passed ../src/testimpl/test_scf.cc(102): info: check compare(scf_energy("cuh2_ecp_hf"), -196.12254012) has passed ../src/testimpl/test_scf.cc(103): info: check compare(scf_energy("hbr_ecp_sohf"), -13.68431370) has passed ../src/testimpl/test_scf.cc(104): info: check compare(scf_energy("h2o_svp_fmm"), -151.91459783) has passed ../src/testimpl/test_scf.cc(106): info: check compare(scf_energy("h2o_svp_fmm_restart"),-151.91459783) has passed ../src/testimpl/test_scf.cc(86): Leaving test case "DF_HF"; testing time: 25272371us ../src/testimpl/test_scf.cc(84): Leaving test suite "TEST_SCF"; testing time: 25272423us ../src/testimpl/test_molden.cc(98): Entering test suite "TEST_MOLDEN" ../src/testimpl/test_molden.cc(100): Entering test case "MOLDEN" ../src/testimpl/test_molden.cc(101): info: check compare(molden_out_energy("hf_write_mol_sph", "hf_read_mol_sph"), -99.84772354 ) has passed ../src/testimpl/test_molden.cc(102): info: check compare(molden_out_energy("hf_write_mol_cart", "hf_read_mol_cart"), -99.84911270 ) has passed ../src/testimpl/test_molden.cc(100): Leaving test case "MOLDEN"; testing time: 686258us ../src/testimpl/test_molden.cc(98): Leaving test suite "TEST_MOLDEN"; testing time: 686345us ../src/testimpl/test_prop.cc(67): Entering test suite "TEST_PROP" ../src/testimpl/test_prop.cc(69): Entering test case "MULTIPOLE" ../src/testimpl/test_prop.cc(70): info: check compare>(multipole("hf_svp_dfhf"), hf_svp_dfhf_multipole_ref(), 1.0e-6) has passed ../src/testimpl/test_prop.cc(69): Leaving test case "MULTIPOLE"; testing time: 215528us ../src/testimpl/test_prop.cc(67): Leaving test suite "TEST_PROP"; testing time: 215588us ../src/testimpl/test_ks.cc(61): Entering test suite "TEST_KS" ../src/testimpl/test_ks.cc(63): Entering test case "DF_KS" ../src/testimpl/test_ks.cc(64): info: check compare(ks_energy("hf_svp_b3lyp"), -100.28959774) has passed ../src/testimpl/test_ks.cc(63): Leaving test case "DF_KS"; testing time: 1916754us ../src/testimpl/test_ks.cc(61): Leaving test suite "TEST_KS"; testing time: 1916813us ../src/testimpl/test_rel.cc(66): Entering test suite "TEST_REL" ../src/testimpl/test_rel.cc(68): Entering test case "DIRAC_FOCK" ../src/testimpl/test_rel.cc(69): info: check compare(rel_energy("hf_svp_coulomb"), -99.93791152) has passed ../src/testimpl/test_rel.cc(70): info: check compare(rel_energy("hf_svp_gaunt"), -99.92699858) has passed ../src/testimpl/test_rel.cc(71): info: check compare(rel_energy("hf_svp_breit"), -99.92755305) has passed ../src/testimpl/test_rel.cc(68): Leaving test case "DIRAC_FOCK"; testing time: 29470346us ../src/testimpl/test_rel.cc(66): Leaving test suite "TEST_REL"; testing time: 29470412us ../src/testimpl/test_mp2.cc(58): Entering test suite "TEST_MP2" ../src/testimpl/test_mp2.cc(60): Entering test case "MP2" ../src/testimpl/test_mp2.cc(61): info: check compare(mp2_energy("benzene_svp_mp2"), -231.31440958) has passed ../src/testimpl/test_mp2.cc(62): info: check compare(mp2_energy("benzene_svp_mp2_aux"), -231.31450878) has passed ../src/testimpl/test_mp2.cc(60): Leaving test case "MP2"; testing time: 64905716us ../src/testimpl/test_mp2.cc(58): Leaving test suite "TEST_MP2"; testing time: 64905786us ../src/testimpl/test_casscf.cc(62): Entering test suite "TEST_CASSCF" ../src/testimpl/test_casscf.cc(64): Entering test case "DF_CASSCF" ../src/testimpl/test_casscf.cc(65): info: check compare(cas_energy("h2o_svp_cas"), -76.00368392) has passed ../src/testimpl/test_casscf.cc(66): info: check compare(cas_energy("lif_svp_cas22"), -106.70563743) has passed ../src/testimpl/test_casscf.cc(67): info: check compare(cas_energy("li2_tzvpp_cas43"), -14.87300366) has passed ../src/testimpl/test_casscf.cc(68): info: check compare(cas_energy("lih_tzvpp_cas22"), -7.98191070) has passed ../src/testimpl/test_casscf.cc(64): Leaving test case "DF_CASSCF"; testing time: 6337390us ../src/testimpl/test_casscf.cc(62): Leaving test suite "TEST_CASSCF"; testing time: 6337448us ../src/testimpl/test_fci.cc(103): Entering test suite "TEST_FCI" ../src/testimpl/test_fci.cc(105): Entering test case "KNOWLES_HANDY" ../src/testimpl/test_fci.cc(106): info: check compare(fci_energy("hf_sto3g_fci_kh"), reference_fci_energy()) has passed ../src/testimpl/test_fci.cc(110): info: check compare(fci_energy("hhe_svp_fci_kh_trip"), reference_fci_energy2()) has passed ../src/testimpl/test_fci.cc(105): Leaving test case "KNOWLES_HANDY"; testing time: 482540us ../src/testimpl/test_fci.cc(113): Entering test case "HARRISON_ZARRABIAN" ../src/testimpl/test_fci.cc(114): info: check compare(fci_energy("hf_sto3g_fci_hz"), reference_fci_energy()) has passed ../src/testimpl/test_fci.cc(115): info: check compare(fci_energy("hhe_svp_fci_hz_trip"), reference_fci_energy2()) has passed ../src/testimpl/test_fci.cc(113): Leaving test case "HARRISON_ZARRABIAN"; testing time: 719183us ../src/testimpl/test_fci.cc(119): Entering test case "DIST_FCI" ../src/testimpl/test_fci.cc(120): info: check compare(fci_energy("hf_sto3g_fci_dist"), reference_fci_energy()) has passed ../src/testimpl/test_fci.cc(119): Leaving test case "DIST_FCI"; testing time: 200554us ../src/testimpl/test_fci.cc(103): Leaving test suite "TEST_FCI"; testing time: 1402449us ../src/testimpl/test_zfci.cc(105): Entering test suite "TEST_RELFCI" ../src/testimpl/test_zfci.cc(107): Entering test case "ZHARRISON" ../src/testimpl/test_zfci.cc(108): info: check compare(relfci_energy("hf_sto3g_relfci_coulomb"), reference_relfci_energy()) has passed ../src/testimpl/test_zfci.cc(109): info: check compare(relfci_energy("hf_sto3g_relfci_gaunt"), reference_relfci_energy2()) has passed ../src/testimpl/test_zfci.cc(110): info: check compare(relfci_energy("hf_sto3g_relfci_breit"), reference_relfci_energy3()) has passed ../src/testimpl/test_zfci.cc(107): Leaving test case "ZHARRISON"; testing time: 17892966us ../src/testimpl/test_zfci.cc(105): Leaving test suite "TEST_RELFCI"; testing time: 17893010us ../src/testimpl/test_zcasscf.cc(98): Entering test suite "TEST_RELCAS" ../src/testimpl/test_zcasscf.cc(100): Entering test case "ZCASSCF" Test case TEST_RELCAS/ZCASSCF did not check any assertions ../src/testimpl/test_zcasscf.cc(100): Leaving test case "ZCASSCF"; testing time: 329us ../src/testimpl/test_zcasscf.cc(98): Leaving test suite "TEST_RELCAS"; testing time: 386us ../src/testimpl/test_ras.cc(92): Entering test suite "TEST_RAS" ../src/testimpl/test_ras.cc(94): Entering test case "FCI_EQUIVALENT" ../src/testimpl/test_ras.cc(95): info: check compare(ras_energy("h2o_sto3g_ras_full"), reference_ras_energy_h2o_full()) has passed ../src/testimpl/test_ras.cc(96): info: check compare(ras_energy("hhe_svp_ras_full"), reference_ras_energy_hhe_full()) has passed ../src/testimpl/test_ras.cc(94): Leaving test case "FCI_EQUIVALENT"; testing time: 683699us ../src/testimpl/test_ras.cc(99): Entering test case "RESTRICTED" ../src/testimpl/test_ras.cc(100): info: check compare(ras_energy("h2o_sto3g_ras_restricted"), reference_ras_energy_h2o_restricted()) has passed ../src/testimpl/test_ras.cc(101): info: check compare(ras_energy("hhe_svp_ras_restricted"), reference_ras_energy_hhe_restricted()) has passed ../src/testimpl/test_ras.cc(99): Leaving test case "RESTRICTED"; testing time: 498607us ../src/testimpl/test_ras.cc(92): Leaving test suite "TEST_RAS"; testing time: 1182386us ../src/testimpl/test_nevpt2.cc(58): Entering test suite "TEST_NEVPT2" ../src/testimpl/test_nevpt2.cc(60): Entering test case "NEVPT2" ../src/testimpl/test_nevpt2.cc(61): info: check compare(nevpt2_energy("h2o_svp_nevpt2"), -76.0205249495) has passed ../src/testimpl/test_nevpt2.cc(60): Leaving test case "NEVPT2"; testing time: 1195842us ../src/testimpl/test_nevpt2.cc(58): Leaving test suite "TEST_NEVPT2"; testing time: 1195885us ../src/testimpl/test_force.cc(102): Entering test suite "TEST_FORCE" ../src/testimpl/test_force.cc(104): Entering test case "Deriv_Coup" ../src/testimpl/test_force.cc(105): info: check compare(run_force("lif_svp_cas_nacme"), reference_cas_nacme(), 1.0e-5) has passed ../src/testimpl/test_force.cc(107): info: check compare(run_force("lif_svp_xmscaspt2_nacme"), reference_xms_nacme(), 1.0e-5) has passed ../src/testimpl/test_force.cc(104): Leaving test case "Deriv_Coup"; testing time: 4858405us ../src/testimpl/test_force.cc(111): Entering test case "Finite_Grad" ../src/testimpl/test_force.cc(112): info: check compare(run_force("hf_mix_dfhf_finite"), reference_scf_finite_mix(), 1.0e-5) has passed ../src/testimpl/test_force.cc(113): info: check compare(run_force("hf_svp_mp2_aux_finite"), reference_svp_mp2_aux_finite(), 1.0e-5) has passed ../src/testimpl/test_force.cc(115): info: check compare(run_force("lif_svp_xmscaspt2_finite"), reference_xms_finite(), 1.0e-5) has passed ../src/testimpl/test_force.cc(111): Leaving test case "Finite_Grad"; testing time: 13750071us ../src/testimpl/test_force.cc(119): Entering test case "Hcore_Grad" ../src/testimpl/test_force.cc(120): info: check compare(run_force("hf_svp_dfhf_dkh_grad"), reference_dkh_grad(), 1.0e-5) has passed ../src/testimpl/test_force.cc(119): Leaving test case "Hcore_Grad"; testing time: 431482us ../src/testimpl/test_force.cc(102): Leaving test suite "TEST_FORCE"; testing time: 19040396us ../src/testimpl/test_opt.cc(146): Entering test suite "TEST_OPT" ../src/testimpl/test_opt.cc(148): Entering test case "DF_HF_Opt" ../src/testimpl/test_opt.cc(149): info: check compare(run_opt("hf_svp_dfhf_opt"), reference_scf_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(150): info: check compare(run_opt("hf_svp_dfhf_opt_cart"), reference_scf_opt_cart(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(151): info: check compare(run_opt("hf_mix_dfhf_opt"), reference_scf_opt_mix(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(152): info: check compare(run_opt("oh_svp_uhf_opt"), reference_uhf_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(153): info: check compare(run_opt("hc_svp_rohf_opt"), reference_rohf_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(154): info: check compare(run_opt("hcl_svp_dfhf_opt"), reference_hcl_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(155): info: check compare(run_opt("hf_svp_coulomb_opt"), reference_dcf_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(148): Leaving test case "DF_HF_Opt"; testing time: 21008859us ../src/testimpl/test_opt.cc(158): Entering test case "DF_KS_Opt" ../src/testimpl/test_opt.cc(159): info: check compare(run_opt("hf_svp_b3lyp_opt"), reference_ks_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(158): Leaving test case "DF_KS_Opt"; testing time: 8429672us ../src/testimpl/test_opt.cc(162): Entering test case "MP2_Opt" ../src/testimpl/test_opt.cc(163): info: check compare>(run_opt("hf_svp_mp2_opt"), reference_mp2_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(164): info: check compare>(run_opt("hf_svp_mp2_aux_opt"), reference_mp2_aux_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(162): Leaving test case "MP2_Opt"; testing time: 5297432us ../src/testimpl/test_opt.cc(166): Entering test case "CASSCF_Opt" ../src/testimpl/test_opt.cc(167): info: check compare>(run_opt("hf_svp_cas_opt"), reference_cas_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(168): info: check compare>(run_opt("hf_svp_sacas_opt"), reference_sacas_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(169): info: check compare>(run_opt("ch2_sto3g_meci_opt"),reference_ch2_opt(), 1.0e-4) has passed ../src/testimpl/test_opt.cc(166): Leaving test case "CASSCF_Opt"; testing time: 14987229us ../src/testimpl/test_opt.cc(146): Leaving test suite "TEST_OPT"; testing time: 49723778us ../src/testimpl/test_localize.cc(75): Entering test suite "TEST_LOCALIZE" ../src/testimpl/test_localize.cc(77): Entering test case "PML" ../src/testimpl/test_localize.cc(78): info: check compare(localization("benzene_sto3g_pml"),0.7951349703, 0.000001) has passed ../src/testimpl/test_localize.cc(79): info: check compare(localization("watertrimer_sto3g_pml_region"),0.9999109690, 0.000001) has passed ../src/testimpl/test_localize.cc(77): Leaving test case "PML"; testing time: 1144423us ../src/testimpl/test_localize.cc(82): Entering test case "REGION" ../src/testimpl/test_localize.cc(83): info: check compare(localization("watertrimer_sto3g_rl"), 0.0) has passed ../src/testimpl/test_localize.cc(82): Leaving test case "REGION"; testing time: 286870us ../src/testimpl/test_localize.cc(75): Leaving test suite "TEST_LOCALIZE"; testing time: 1431401us ../src/testimpl/test_asd.cc(162): Entering test suite "TEST_ASD" ../src/testimpl/test_asd.cc(164): Entering test case "CAS" ../src/testimpl/test_asd.cc(165): info: check compare(asd_energy("benzene_sto3g_asd_stack"), -459.40037137, 1.0e-6) has passed ../src/testimpl/test_asd.cc(166): info: check compare(asd_energy("benzene_sto3g_asd_T"), -459.36294726, 1.0e-6) has passed ../src/testimpl/test_asd.cc(164): Leaving test case "CAS"; testing time: 36356643us ../src/testimpl/test_asd.cc(169): Entering test case "RAS" ../src/testimpl/test_asd.cc(170): info: check compare(asd_models("benzene_sto3g_asd-ras_stack"), std::vector{{ 0.000000000, 0.000047060, 0.000047060, 0.000000000, -0.001758099, 0.001599564, 0.001599564, -0.001758099 }}, 1.0e-6) has passed ../src/testimpl/test_asd.cc(169): Leaving test case "RAS"; testing time: 17032630us ../src/testimpl/test_asd.cc(162): Leaving test suite "TEST_ASD"; testing time: 53389558us ../src/testimpl/test_asd_dmrg.cc(68): Entering test suite "TEST_ASD_DMRG" ../src/testimpl/test_asd_dmrg.cc(70): Entering test case "RASD_DMRG" ../src/testimpl/test_asd_dmrg.cc(71): info: check compare(asd_dmrg_energy("he3_svp_asd-dmrg"), -8.59391356, 1.0e-8) has passed ../src/testimpl/test_asd_dmrg.cc(70): Leaving test case "RASD_DMRG"; testing time: 33865271us ../src/testimpl/test_asd_dmrg.cc(68): Leaving test suite "TEST_ASD_DMRG"; testing time: 33865406us ../src/testimpl/test_london.cc(67): Entering test suite "TEST_LONDON" ../src/testimpl/test_london.cc(69): Entering test case "LONDON" ../src/testimpl/test_london.cc(70): info: check compare(london_energy("hf_svp_london_hf"), -99.70397733) has passed ../src/testimpl/test_london.cc(71): info: check compare(london_energy("hf_svp_london_dfhf"), -99.70391005) has passed ../src/testimpl/test_london.cc(72): info: check compare(london_energy("hf_svp_common_dfhf"), -98.55057515) has passed ../src/testimpl/test_london.cc(73): info: check compare(london_energy("hf_svp_london_coulomb"), -99.82461004) has passed ../src/testimpl/test_london.cc(74): info: check compare(london_energy("hf_svp_london_gaunt"), -99.81352977) has passed ../src/testimpl/test_london.cc(75): info: check compare(london_energy("hcl_svp_london_coulomb"), -459.16442992) has passed ../src/testimpl/test_london.cc(76): info: check compare(london_energy("hcl_svp_common_coulomb"), -457.89462676) has passed ../src/testimpl/test_london.cc(77): info: check compare(london_energy("hcl_svp_common_gaunt"), -454.55922514) has passed ../src/testimpl/test_london.cc(69): Leaving test case "LONDON"; testing time: 92902149us ../src/testimpl/test_london.cc(67): Leaving test suite "TEST_LONDON"; testing time: 92902196us ../src/testimpl/test_pseudospin.cc(96): Entering test suite "TEST_PSEUDOSPIN" ../src/testimpl/test_pseudospin.cc(98): Entering test case "ZFSPLITTING" Test case TEST_PSEUDOSPIN/ZFSPLITTING did not check any assertions ../src/testimpl/test_pseudospin.cc(98): Leaving test case "ZFSPLITTING"; testing time: 444us ../src/testimpl/test_pseudospin.cc(96): Leaving test suite "TEST_PSEUDOSPIN"; testing time: 502us ../src/testimpl/test_smith.cc(59): Entering test suite "TEST_SMITH" ../src/testimpl/test_smith.cc(61): Entering test case "CASPT2_Opt" ../src/testimpl/test_smith.cc(62): info: check compare(run_force("li2_svp_caspt2_grad"), reference_noshift(), 1.0e-5) has passed ../src/testimpl/test_smith.cc(63): info: check compare(run_force("li2_svp_caspt2_shift"), reference_shift(), 1.0e-5) has passed ../src/testimpl/test_smith.cc(64): info: check compare(run_force("lif_svp_mscaspt2_grad"), reference_ms(), 1.0e-5) has passed ../src/testimpl/test_smith.cc(65): info: check compare(run_force("lif_svp_xmscaspt2_grad"), reference_xms(), 1.0e-5) has passed ../src/testimpl/test_smith.cc(66): info: check compare(run_force("lif_svp_xmscaspt2_grad_imag"), reference_xms_imag(), 1.0e-5) has passed ../src/testimpl/test_smith.cc(61): Leaving test case "CASPT2_Opt"; testing time: 18726050us ../src/testimpl/test_smith.cc(59): Leaving test suite "TEST_SMITH"; testing time: 18726234us ../src/testimpl/test_response.cc(67): Entering test suite "TEST_RESPONSE" ../src/testimpl/test_response.cc(69): Entering test case "CIS" ../src/testimpl/test_response.cc(70): info: check compare>(cis_energy("hf_svp_cis"), hf_svp_cis_ref(), 1.0e-6) has passed ../src/testimpl/test_response.cc(69): Leaving test case "CIS"; testing time: 342010us ../src/testimpl/test_response.cc(67): Leaving test suite "TEST_RESPONSE"; testing time: 348418us Leaving test module "Suites"; testing time: 419908425us  *** No errors detected make[1]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --max-parallel=1 --with autoreconf dh_testroot -a -O--max-parallel=1 dh_prep -a -O--max-parallel=1 dh_installdirs -a -O--max-parallel=1 debian/rules override_dh_auto_install make[1]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' dh_auto_install --destdir=/build/bagel-8uFpDL/bagel-1.2.2/debian/tmp make -j1 install DESTDIR=/build/bagel-8uFpDL/bagel-1.2.2/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' Making install in src make[3]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src' Making install in util make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util' Making install in parallel make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/parallel' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/parallel' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/parallel' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/parallel' Making install in io make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/io' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/io' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/io' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/io' Making install in input make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/input' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/input' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/input' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/input' Making install in math make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/math' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/math' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/math' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util/math' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/util' Making install in molecule make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/molecule' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/molecule' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/molecule' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/molecule' Making install in integral make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/integral' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/integral' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/integral' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/integral' Making install in df make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/df' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/df' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/df' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/df' Making install in opt make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/opt' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/opt' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/opt' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/opt' Making install in grad make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/grad' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/grad' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/grad' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/grad' Making install in pt2 make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/pt2' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/pt2' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/pt2' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/pt2' Making install in wfn make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/wfn' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/wfn' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/wfn' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/wfn' Making install in scf make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/scf' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/scf' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/scf' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/scf' Making install in multi make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi' Making install in casscf make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/casscf' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/casscf' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/casscf' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/casscf' Making install in zcasscf make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/zcasscf' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/zcasscf' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/zcasscf' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi/zcasscf' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/multi' Making install in smith make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/smith' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/smith' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/smith' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/smith' Making install in prop make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/prop' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/prop' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/prop' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/prop' Making install in ci make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci' Making install in ciutil make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ciutil' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ciutil' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ciutil' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ciutil' Making install in fci make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/fci' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/fci' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/fci' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/fci' Making install in ras make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ras' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ras' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ras' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/ras' Making install in zfci make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/zfci' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/zfci' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/zfci' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci/zfci' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/ci' Making install in response make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/response' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/response' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/response' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/response' Making install in asd make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd' Making install in dmrg make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dmrg' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dmrg' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dmrg' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dmrg' Making install in dimer make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dimer' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dimer' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dimer' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/dimer' Making install in multisite make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/multisite' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/multisite' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/multisite' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/multisite' Making install in orbital make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/orbital' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/orbital' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/orbital' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd/orbital' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd' make[6]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/asd' Making install in mat1e make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/mat1e' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/mat1e' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/mat1e' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/mat1e' Making install in basis make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/basis' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src/basis' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/share/bagel' /usr/bin/install -c -m 644 3-21g.json 6-31g.json ano-rcc.json aug-cc-pv5z.json aug-cc-pv6z.json aug-cc-pvdz.json aug-cc-pvqz.json aug-cc-pvtz.json cc-pv5z-jkfit.json cc-pv5z-ri.json cc-pv5z.json cc-pv6z.json cc-pvdz-jkfit.json cc-pvdz-ri.json cc-pvdz.json cc-pvqz-jkfit.json cc-pvqz-ri.json cc-pvqz.json cc-pvtz-jkfit.json cc-pvtz-ri.json cc-pvtz.json complete.json def2-SVP-2c-ecp.json def2-SVP-ecp.json ecp10mdf.json ecp28mdf.json ecp46mdf.json ecp60mdf.json ecp78mdf.json lanl2dz-ecp.json qzvpp-jkfit.json qzvpp.json sto-3g.json svp-jkfit.json svp.json tzvpp-jkfit.json tzvpp.json aug-cc-pcv5z.json aug-cc-pcvqz.json aug-cc-pwcvdz.json '/build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/share/bagel' /usr/bin/install -c -m 644 cc-pcv5z.json cc-pvdz-dk.json d-aug-cc-pvqz.json aug-cc-pcvdz-dk.json aug-cc-pcvtz-dk.json aug-cc-pwcvqz.json cc-pcvdz.json cc-pvtz-dk.json d-aug-cc-pvtz.json aug-cc-pcvdz.json aug-cc-pcvtz.json aug-cc-pwcvtz.json cc-pcvqz.json d-aug-cc-pv5z.json aug-cc-pcvqz-dk.json aug-cc-pwcv5z.json cc-pcvtz.json d-aug-cc-pvdz.json '/build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/share/bagel' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/basis' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src/basis' make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src' make[5]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2/src' /bin/mkdir -p '/build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/lib/bagel' /bin/bash ../libtool --mode=install /usr/bin/install -c libbagel.la '/build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/lib/bagel' libtool: install: /usr/bin/install -c .libs/libbagel.lai /build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/lib/bagel/libbagel.la libtool: install: /usr/bin/install -c .libs/libbagel.a /build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/lib/bagel/libbagel.a libtool: install: chmod 644 /build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/lib/bagel/libbagel.a libtool: install: ranlib /build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/lib/bagel/libbagel.a libtool: warning: remember to run 'libtool --finish /usr/lib/bagel' /bin/mkdir -p '/build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c BAGEL '/build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/bin' libtool: install: /usr/bin/install -c BAGEL /build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/bin/BAGEL /bin/mkdir -p '/build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/include' /usr/bin/install -c -m 644 bagel.h '/build/bagel-8uFpDL/bagel-1.2.2/debian/tmp/usr/include' make[5]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src' make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src' make[3]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2/src' make[3]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' make[4]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' make[3]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' make[2]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' (cd docs; cp -a _static _images searchindex.js /build/bagel-8uFpDL/bagel-1.2.2/debian/bagel/usr/share/doc/bagel/html) (cd docs; cp --parents `find -name \*.html*` /build/bagel-8uFpDL/bagel-1.2.2/debian/bagel/usr/share/doc/bagel/html) make[1]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' dh_install -a -O--max-parallel=1 dh_installdocs -a -O--max-parallel=1 debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/bagel-8uFpDL/bagel-1.2.2' dh_installchangelogs -XChangeLog make[1]: Leaving directory '/build/bagel-8uFpDL/bagel-1.2.2' dh_installexamples -a -O--max-parallel=1 dh_installinit -a -O--max-parallel=1 dh_installsystemduser -a -O--max-parallel=1 dh_perl -a -O--max-parallel=1 dh_link -a -O--max-parallel=1 dh_strip_nondeterminism -a -O--max-parallel=1 dh_compress -a -O--max-parallel=1 dh_fixperms -a -O--max-parallel=1 dh_missing -a -O--max-parallel=1 dh_missing: warning: usr/include/bagel.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/bagel/libbagel.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/bagel/libbagel.la exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: bagel (2) * dh_installdocs: bagel (0) * dh_installexamples: bagel (93) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. dh_dwz -a -O--max-parallel=1 dh_strip -a -O--max-parallel=1 dh_makeshlibs -a -O--max-parallel=1 dh_shlibdeps -a -O--max-parallel=1 dh_installdeb -a -O--max-parallel=1 dh_gencontrol -a -O--max-parallel=1 dh_md5sums -a -O--max-parallel=1 dh_builddeb -a -O--max-parallel=1 dpkg-deb: building package 'bagel-dbgsym' in '../bagel-dbgsym_1.2.2-2_amd64.deb'. dpkg-deb: building package 'bagel' in '../bagel_1.2.2-2_amd64.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../bagel_1.2.2-2_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/bagel-8uFpDL /tmp/bagel-1.2.2-2jcaji67x I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.wLzrtNZDs4... I: success in 19732.3548 seconds md5: bagel-dbgsym_1.2.2-2_amd64.deb: OK md5: bagel_1.2.2-2_amd64.deb: OK sha1: bagel-dbgsym_1.2.2-2_amd64.deb: OK sha1: bagel_1.2.2-2_amd64.deb: OK sha256: bagel-dbgsym_1.2.2-2_amd64.deb: OK sha256: bagel_1.2.2-2_amd64.deb: OK Checksums: OK