Input buildinfo: https://buildinfos.debian.net/buildinfo-pool/a/acedb/acedb_4.9.39+dfsg.02-5_all.buildinfo Use metasnap for getting required timestamps New buildinfo file: /tmp/acedb-4.9.39+dfsg.02-5g83y217u/acedb_4.9.39+dfsg.02-5_all.buildinfo Get source package info: acedb=4.9.39+dfsg.02-5 Source URL: http://snapshot.notset.fr/mr/package/acedb/4.9.39+dfsg.02-5/srcfiles?fileinfo=1 env -i PATH=/usr/sbin:/usr/bin:/sbin:/bin TMPDIR=/tmp mmdebstrap --arch=amd64 --include=adwaita-icon-theme=3.38.0-1 autoconf=2.69-11.1 automake=1:1.16.2-4 autopoint=0.19.8.1-10 autotools-dev=20180224.1 base-files=11 base-passwd=3.5.48 bash=5.1~rc3-1 binutils=2.35.1-3 binutils-common=2.35.1-3 binutils-x86-64-linux-gnu=2.35.1-3 bison=2:3.7.3+dfsg-1 bsdextrautils=2.36.1-2 bsdutils=1:2.36.1-1 build-essential=12.8 bzip2=1.0.8-4 coreutils=8.32-4+b1 cpp=4:10.2.0-1 cpp-10=10.2.0-19 csh=20110502-6 dash=0.5.11+git20200708+dd9ef66-2 debconf=1.5.74 debhelper=13.2.1 debianutils=4.11.2 dh-autoreconf=19 dh-strip-nondeterminism=1.9.0-1 diffutils=1:3.7-3 dpkg=1.20.5 dpkg-dev=1.20.5 dwz=0.13-5 file=1:5.39-3 findutils=4.7.0+git20201010-2 flex=2.6.4-8 fontconfig=2.13.1-4.2 fontconfig-config=2.13.1-4.2 fonts-dejavu-core=2.37-2 g++=4:10.2.0-1 g++-10=10.2.0-19 gcc=4:10.2.0-1 gcc-10=10.2.0-19 gcc-10-base=10.2.0-19 gettext=0.19.8.1-10 gettext-base=0.19.8.1-10 gir1.2-atk-1.0=2.36.0-2 gir1.2-freedesktop=1.66.1-1+b1 gir1.2-gdkpixbuf-2.0=2.40.0+dfsg-8 gir1.2-glib-2.0=1.66.1-1+b1 gir1.2-gtk-2.0=2.24.32-5 gir1.2-harfbuzz-0.0=2.6.7-1 gir1.2-pango-1.0=1.46.2-3 grep=3.6-1 groff-base=1.22.4-5 gtk-update-icon-cache=3.24.23-3 gzip=1.10-2 hicolor-icon-theme=0.17-2 hostname=3.23 icu-devtools=67.1-4 init-system-helpers=1.59 intltool-debian=0.35.0+20060710.5 libacl1=2.2.53-8 libarchive-zip-perl=1.68-1 libasan6=10.2.0-19 libatk1.0-0=2.36.0-2 libatk1.0-data=2.36.0-2 libatk1.0-dev=2.36.0-2 libatomic1=10.2.0-19 libattr1=1:2.4.48-5 libaudit-common=1:2.8.5-3.1 libaudit1=1:2.8.5-3.1 libavahi-client3=0.8-3 libavahi-common-data=0.8-3 libavahi-common3=0.8-3 libbinutils=2.35.1-3 libblkid-dev=2.36.1-2 libblkid1=2.36.1-2 libbrotli-dev=1.0.9-2+b1 libbrotli1=1.0.9-2+b1 libbsd0=0.10.0-1 libbz2-1.0=1.0.8-4 libc-bin=2.31-4 libc-dev-bin=2.31-4 libc6=2.31-4 libc6-dev=2.31-4 libcairo-gobject2=1.16.0-4 libcairo-script-interpreter2=1.16.0-4 libcairo2=1.16.0-4 libcairo2-dev=1.16.0-4 libcap-ng0=0.7.9-2.2+b1 libcc1-0=10.2.0-19 libcom-err2=1.45.6-1 libcroco3=0.6.13-1 libcrypt-dev=1:4.4.17-1 libcrypt1=1:4.4.17-1 libctf-nobfd0=2.35.1-3 libctf0=2.35.1-3 libcups2=2.3.3op1-2 libdatrie-dev=0.2.12-3 libdatrie1=0.2.12-3 libdb5.3=5.3.28+dfsg1-0.6 libdbus-1-3=1.12.20-1 libdebconfclient0=0.255 libdebhelper-perl=13.2.1 libdpkg-perl=1.20.5 libelf1=0.182-1 libexpat1=2.2.10-1 libexpat1-dev=2.2.10-1 libffi-dev=3.3-5 libffi7=3.3-5 libfile-stripnondeterminism-perl=1.9.0-1 libfl-dev=2.6.4-8 libfl2=2.6.4-8 libfontconfig-dev=2.13.1-4.2 libfontconfig1=2.13.1-4.2 libfontconfig1-dev=2.13.1-4.2 libfreetype-dev=2.10.2+dfsg-4 libfreetype6=2.10.2+dfsg-4 libfreetype6-dev=2.10.2+dfsg-4 libfribidi-dev=1.0.8-2 libfribidi0=1.0.8-2 libgcc-10-dev=10.2.0-19 libgcc-s1=10.2.0-19 libgcrypt20=1.8.7-2 libgdbm-compat4=1.18.1-5.1 libgdbm6=1.18.1-5.1 libgdk-pixbuf-2.0-0=2.40.0+dfsg-8 libgdk-pixbuf-2.0-dev=2.40.0+dfsg-8 libgdk-pixbuf2.0-bin=2.40.0+dfsg-8 libgdk-pixbuf2.0-common=2.40.0+dfsg-8 libgirepository-1.0-1=1.66.1-1+b1 libglib2.0-0=2.66.3-1 libglib2.0-bin=2.66.3-1 libglib2.0-data=2.66.3-1 libglib2.0-dev=2.66.3-1 libglib2.0-dev-bin=2.66.3-1 libgmp10=2:6.2.1+dfsg-1 libgnutls30=3.6.15-4 libgomp1=10.2.0-19 libgpg-error0=1.38-2 libgraphite2-3=1.3.14-1 libgraphite2-dev=1.3.14-1 libgssapi-krb5-2=1.18.3-4 libgtk2.0-0=2.24.32-5 libgtk2.0-common=2.24.32-5 libgtk2.0-dev=2.24.32-5 libharfbuzz-dev=2.6.7-1 libharfbuzz-gobject0=2.6.7-1 libharfbuzz-icu0=2.6.7-1 libharfbuzz0b=2.6.7-1 libhogweed6=3.6-2 libice-dev=2:1.0.10-1 libice6=2:1.0.10-1 libicu-dev=67.1-4 libicu67=67.1-4 libidn2-0=2.3.0-4 libisl23=0.23-1 libitm1=10.2.0-19 libjbig0=2.1-3.1+b2 libjpeg62-turbo=1:2.0.5-1.1 libk5crypto3=1.18.3-4 libkeyutils1=1.6.1-2 libkrb5-3=1.18.3-4 libkrb5support0=1.18.3-4 liblsan0=10.2.0-19 liblz4-1=1.9.2-2 liblzma5=5.2.4-1+b1 liblzo2-2=2.10-2 libmagic-mgc=1:5.39-3 libmagic1=1:5.39-3 libmount-dev=2.36.1-2 libmount1=2.36.1-2 libmpc3=1.2.0-1 libmpfr6=4.1.0-3 libncurses-dev=6.2+20201114-1 libncurses6=6.2+20201114-1 libncursesw6=6.2+20201114-1 libnettle8=3.6-2 libnsl-dev=1.3.0-2 libnsl2=1.3.0-2 libnss-nis=3.1-4 libnss-nisplus=1.3-4 libp11-kit0=0.23.21-2 libpam-modules=1.3.1-5 libpam-modules-bin=1.3.1-5 libpam-runtime=1.3.1-5 libpam0g=1.3.1-5 libpango-1.0-0=1.46.2-3 libpango1.0-dev=1.46.2-3 libpangocairo-1.0-0=1.46.2-3 libpangoft2-1.0-0=1.46.2-3 libpangoxft-1.0-0=1.46.2-3 libpcre16-3=2:8.39-13 libpcre2-16-0=10.34-7 libpcre2-32-0=10.34-7 libpcre2-8-0=10.34-7 libpcre2-dev=10.34-7 libpcre2-posix2=10.34-7 libpcre3=2:8.39-13 libpcre3-dev=2:8.39-13 libpcre32-3=2:8.39-13 libpcrecpp0v5=2:8.39-13 libperl5.32=5.32.0-5 libpipeline1=1.5.3-1 libpixman-1-0=0.36.0-1 libpixman-1-dev=0.36.0-1 libpng-dev=1.6.37-3 libpng16-16=1.6.37-3 libpthread-stubs0-dev=0.4-1 libpython3-stdlib=3.9.0-3 libpython3.9-minimal=3.9.1~rc1-2 libpython3.9-stdlib=3.9.1~rc1-2 libquadmath0=10.2.0-19 libreadline-dev=8.1~rc3-1 libreadline8=8.1~rc3-1 libseccomp2=2.5.0-3 libselinux1=3.1-2+b1 libselinux1-dev=3.1-2+b1 libsepol1=3.1-1 libsepol1-dev=3.1-1 libsigsegv2=2.12-2 libsm-dev=2:1.2.3-1 libsm6=2:1.2.3-1 libsmartcols1=2.36.1-1 libsqlite3-0=3.33.0-1 libssl1.1=1.1.1h-1 libstdc++-10-dev=10.2.0-19 libstdc++6=10.2.0-19 libsub-override-perl=0.09-2 libsystemd0=246.6-5 libtasn1-6=4.16.0-2 libthai-data=0.1.28-3 libthai-dev=0.1.28-3 libthai0=0.1.28-3 libtiff5=4.1.0+git191117-2 libtinfo6=6.2+20201114-1 libtirpc-common=1.2.6-3 libtirpc-dev=1.2.6-3 libtirpc3=1.2.6-3 libtool=2.4.6-14 libtsan0=10.2.0-19 libubsan1=10.2.0-19 libuchardet0=0.0.7-1 libudev1=246.6-5 libunistring2=0.9.10-4 libuuid1=2.36.1-2 libwebp6=0.6.1-2+b1 libx11-6=2:1.6.12-1 libx11-data=2:1.6.12-1 libx11-dev=2:1.6.12-1 libxau-dev=1:1.0.8-1+b2 libxau6=1:1.0.8-1+b2 libxcb-render0=1.14-2 libxcb-render0-dev=1.14-2 libxcb-shm0=1.14-2 libxcb-shm0-dev=1.14-2 libxcb1=1.14-2 libxcb1-dev=1.14-2 libxcomposite-dev=1:0.4.5-1 libxcomposite1=1:0.4.5-1 libxcursor-dev=1:1.2.0-2 libxcursor1=1:1.2.0-2 libxdamage-dev=1:1.1.5-2 libxdamage1=1:1.1.5-2 libxdmcp-dev=1:1.1.2-3 libxdmcp6=1:1.1.2-3 libxext-dev=2:1.3.3-1+b2 libxext6=2:1.3.3-1+b2 libxfixes-dev=1:5.0.3-2 libxfixes3=1:5.0.3-2 libxft-dev=2.3.2-2 libxft2=2.3.2-2 libxi-dev=2:1.7.10-1 libxi6=2:1.7.10-1 libxinerama-dev=2:1.1.4-2 libxinerama1=2:1.1.4-2 libxml2=2.9.10+dfsg-6.3 libxml2-utils=2.9.10+dfsg-6.3 libxrandr-dev=2:1.5.1-1 libxrandr2=2:1.5.1-1 libxrender-dev=1:0.9.10-1 libxrender1=1:0.9.10-1 libzstd1=1.4.5+dfsg-4 linux-libc-dev=5.9.9-1 login=1:4.8.1-1 lsb-base=11.1.0 m4=1.4.18-4 mailcap=3.67 make=4.3-4 man-db=2.9.3-2 mawk=1.3.4.20200120-2 media-types=1.0.1 mime-support=3.66 ncurses-base=6.2+20201114-1 ncurses-bin=6.2+20201114-1 pango1.0-tools=1.46.2-3 patch=2.7.6-6 perl=5.32.0-5 perl-base=5.32.0-5 perl-modules-5.32=5.32.0-5 pkg-config=0.29.2-1 po-debconf=1.0.21 python3=3.9.0-3 python3-distutils=3.8.6-1 python3-lib2to3=3.8.6-1 python3-minimal=3.9.0-3 python3.9=3.9.1~rc1-2 python3.9-minimal=3.9.1~rc1-2 readline-common=8.1~rc3-1 sed=4.7-1 sensible-utils=0.0.12+nmu1 shared-mime-info=2.0-1 sysvinit-utils=2.96-5 tar=1.30+dfsg-7 tzdata=2020d-1 ucf=3.0043 util-linux=2.36.1-1 uuid-dev=2.36.1-2 x11-common=1:7.7+21 x11proto-core-dev=2020.1-1 x11proto-dev=2020.1-1 x11proto-input-dev=2020.1-1 x11proto-randr-dev=2020.1-1 x11proto-xext-dev=2020.1-1 x11proto-xinerama-dev=2020.1-1 xorg-sgml-doctools=1:1.11-1 xtrans-dev=1.4.0-1 xz-utils=5.2.4-1+b1 zlib1g=1:1.2.11.dfsg-2 zlib1g-dev=1:1.2.11.dfsg-2 --variant=apt --aptopt=Acquire::Check-Valid-Until "false" --aptopt=Acquire::http::Dl-Limit "1000"; --aptopt=Acquire::https::Dl-Limit "1000"; --aptopt=Acquire::Retries "5"; --aptopt=APT::Get::allow-downgrades "true"; --keyring=/usr/share/keyrings/ --essential-hook=chroot "$1" sh -c "apt-get --yes install fakeroot util-linux" --essential-hook=copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ --essential-hook=chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201204T091748Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20201125T210657Z/ unstable main' >> /etc/apt/sources.list && apt-get update" --customize-hook=chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash --customize-hook=chroot "$1" env sh -c "apt-get source --only-source -d acedb=4.9.39+dfsg.02-5 && mkdir -p /build/acedb-8yY35X && dpkg-source --no-check -x /*.dsc /build/acedb-8yY35X/acedb-4.9.39+dfsg.02 && chown -R builduser:builduser /build/acedb-8yY35X" --customize-hook=chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/acedb-8yY35X/acedb-4.9.39+dfsg.02 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1606505040" dpkg-buildpackage -uc -a amd64 --build=all" --customize-hook=sync-out /build/acedb-8yY35X /tmp/acedb-4.9.39+dfsg.02-5g83y217u bullseye /dev/null deb http://snapshot.notset.fr/archive/debian/20201125T210657Z unstable main I: automatically chosen mode: root I: chroot architecture amd64 is equal to the host's architecture I: automatically chosen format: tar I: using /tmp/mmdebstrap.MbvbqR_nMz as tempdir I: running apt-get update... I: downloading packages with apt... I: extracting archives... I: installing essential packages... I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "apt-get --yes install fakeroot util-linux"' exec /tmp/mmdebstrap.MbvbqR_nMz Reading package lists... Building dependency tree... util-linux is already the newest version (2.36.1-1). The following NEW packages will be installed: fakeroot libfakeroot 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 134 kB of archives. After this operation, 397 kB of additional disk space will be used. Get:1 http://snapshot.notset.fr/archive/debian/20201125T210657Z unstable/main amd64 libfakeroot amd64 1.25.3-1.1 [47.0 kB] Get:2 http://snapshot.notset.fr/archive/debian/20201125T210657Z unstable/main amd64 fakeroot amd64 1.25.3-1.1 [87.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 134 kB in 0s (715 kB/s) Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4697 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.25.3-1.1_amd64.deb ... Unpacking libfakeroot:amd64 (1.25.3-1.1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.25.3-1.1_amd64.deb ... Unpacking fakeroot (1.25.3-1.1) ... Setting up libfakeroot:amd64 (1.25.3-1.1) ... Setting up fakeroot (1.25.3-1.1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Processing triggers for libc-bin (2.31-4) ... I: running special hook: copy-in /usr/share/keyrings/debian-archive-bullseye-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-security-automatic.gpg /usr/share/keyrings/debian-archive-bullseye-stable.gpg /usr/share/keyrings/debian-archive-buster-automatic.gpg /usr/share/keyrings/debian-archive-buster-security-automatic.gpg /usr/share/keyrings/debian-archive-buster-stable.gpg /usr/share/keyrings/debian-archive-keyring.gpg /usr/share/keyrings/debian-archive-removed-keys.gpg /usr/share/keyrings/debian-archive-stretch-automatic.gpg /usr/share/keyrings/debian-archive-stretch-security-automatic.gpg /usr/share/keyrings/debian-archive-stretch-stable.gpg /usr/share/keyrings/debian-ports-archive-keyring-removed.gpg /usr/share/keyrings/debian-ports-archive-keyring.gpg /usr/share/keyrings/debian-keyring.gpg /etc/apt/trusted.gpg.d/ I: running --essential-hook in shell: sh -c 'chroot "$1" sh -c "rm /etc/apt/sources.list && echo 'deb http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb-src http://snapshot.notset.fr/archive/debian/20210814T212851Z/ bookworm main deb http://snapshot.notset.fr/archive/debian/20201204T091748Z/ unstable main deb http://snapshot.notset.fr/archive/debian/20201125T210657Z/ unstable main' >> /etc/apt/sources.list && apt-get update"' exec /tmp/mmdebstrap.MbvbqR_nMz Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm InRelease [81.6 kB] Get:2 http://snapshot.notset.fr/archive/debian/20201204T091748Z unstable InRelease [150 kB] Hit:3 http://snapshot.notset.fr/archive/debian/20201125T210657Z unstable InRelease Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Ign:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources Ign:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages Get:4 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main Sources [11.4 MB] Get:5 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main amd64 Packages [11.1 MB] Ign:6 http://snapshot.notset.fr/archive/debian/20201204T091748Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20201204T091748Z unstable/main amd64 Packages Ign:6 http://snapshot.notset.fr/archive/debian/20201204T091748Z unstable/main amd64 Packages Get:6 http://snapshot.notset.fr/archive/debian/20201204T091748Z unstable/main amd64 Packages [11.6 MB] Fetched 34.3 MB in 29s (1179 kB/s) Reading package lists... I: installing remaining packages inside the chroot... I: running --customize-hook in shell: sh -c 'chroot "$1" useradd --no-create-home -d /nonexistent -p "" builduser -s /bin/bash' exec /tmp/mmdebstrap.MbvbqR_nMz I: running --customize-hook in shell: sh -c 'chroot "$1" env sh -c "apt-get source --only-source -d acedb=4.9.39+dfsg.02-5 && mkdir -p /build/acedb-8yY35X && dpkg-source --no-check -x /*.dsc /build/acedb-8yY35X/acedb-4.9.39+dfsg.02 && chown -R builduser:builduser /build/acedb-8yY35X"' exec /tmp/mmdebstrap.MbvbqR_nMz Reading package lists... NOTICE: 'acedb' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/acedb.git Please use: git clone https://salsa.debian.org/med-team/acedb.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5638 kB of source archives. Get:1 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main acedb 4.9.39+dfsg.02-5 (dsc) [2240 B] Get:2 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main acedb 4.9.39+dfsg.02-5 (tar) [5622 kB] Get:3 http://snapshot.notset.fr/archive/debian/20210814T212851Z bookworm/main acedb 4.9.39+dfsg.02-5 (diff) [13.7 kB] Fetched 5638 kB in 4s (1266 kB/s) Download complete and in download only mode W: Download is performed unsandboxed as root as file 'acedb_4.9.39+dfsg.02-5.dsc' couldn't be accessed by user '_apt'. - pkgAcquire::Run (13: Permission denied) dpkg-source: info: extracting acedb in /build/acedb-8yY35X/acedb-4.9.39+dfsg.02 dpkg-source: info: unpacking acedb_4.9.39+dfsg.02.orig.tar.xz dpkg-source: info: unpacking acedb_4.9.39+dfsg.02-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying blxview_gtk_namespace_conflict.patch dpkg-source: info: applying belvu_help.patch dpkg-source: info: applying efetch_help.patch dpkg-source: info: applying dotter_help.patch dpkg-source: info: applying binutils-gold.patch dpkg-source: info: applying no-curses.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying fix_hardening_errors.patch dpkg-source: info: applying mayhem.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying no_dotter_and_belvu.patch dpkg-source: info: applying libfl.patch I: running --customize-hook in shell: sh -c 'chroot "$1" env --unset=TMPDIR runuser builduser -c "cd /build/acedb-8yY35X/acedb-4.9.39+dfsg.02 && env DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1606505040" dpkg-buildpackage -uc -a amd64 --build=all"' exec /tmp/mmdebstrap.MbvbqR_nMz dpkg-buildpackage: info: source package acedb dpkg-buildpackage: info: source version 4.9.39+dfsg.02-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' echo "this goes into an endless loop :-(" this goes into an endless loop :-( make[1]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' debian/rules override_dh_clean make[1]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' dh_clean bin rm -fr bin.LINUX_4 sed -i 's?^\(.define ACEDB_RELEASE_DIR\) ".*"?\1 "/nfs/disk100/acedb/RELEASE.2007_07_06.BUILD/bin.DARWIN_4"?' wnq/aceversion.c make[1]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' debian/rules binary-indep dh binary-indep dh_update_autotools_config -i dh_autoreconf -i dh_auto_configure -i debian/rules override_dh_auto_build make[1]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' ln -sf bin.LINUX_4 bin /usr/bin/make tools other CFLAGS="-g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' making makeUserPasswd for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o aceversion.o aceversion.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o freesubs.o freesubs.c freesubs.c: In function ‘freeread’: freesubs.c:363:8: warning: this ‘while’ clause does not guard... [-Wmisleading-indentation] 363 | { while (getc(fil) != '\n' && !feof(fil)) ; | ^~~~~ freesubs.c:364:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘while’ 364 | ++*line ; | ^~ In file included from freesubs.c:42: At top level: ../wh/version.h:133:20: warning: ‘ut_copyright_string’ defined but not used [-Wunused-variable] 133 | static const char *ut_copyright_string = \ | ^~~~~~~~~~~~~~~~~~~ freesubs.c:55:1: note: in expansion of macro ‘UT_COPYRIGHT_STRING’ 55 | UT_COPYRIGHT_STRING(FREE_TITLE, FREE_VERSION, FREE_RELEASE, FREE_UPDATE, FREE_DESC) | ^~~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o freeout.o freeout.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o messubs.o messubs.c messubs.c: In function ‘uMessCrash’: messubs.c:197:26: warning: the address of ‘prefix’ will always evaluate as ‘true’ [-Waddress] 197 | prefixLength = _prefix ? strlen(_prefix) : 0 ; \ | ^ messubs.c:507:5: note: in expansion of macro ‘ACFORMAT’ 507 | ACFORMAT (prefix) ; | ^~~~~~~~ messubs.c:507:15: warning: the address of ‘prefix’ will always evaluate as ‘true’ [-Waddress] 507 | ACFORMAT (prefix) ; | ^~~~~~ messubs.c:199:7: note: in definition of macro ‘ACFORMAT’ 199 | if (_prefix) catText (s, _prefix) ;\ | ^~~~~~~ messubs.c: In function ‘messGetErrorProgram’: messubs.c:889:8: warning: assignment discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 889 | cp = g_get_prgname() ; /* mieg, apr 2004: this call may return NULL */ | ^ messubs.c: In function ‘uMessCrash’: messubs.c:509:5: warning: ‘strncpy’ specified bound 32768 equals destination size [-Wstringop-truncation] 509 | strncpy (messbuf, message, BUFSIZE) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ messubs.c: In function ‘messout’: messubs.c:407:3: warning: ‘strncpy’ specified bound 32768 equals destination size [-Wstringop-truncation] 407 | strncpy (messbuf, message, BUFSIZE) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ messubs.c: In function ‘messExit’: messubs.c:465:3: warning: ‘strncpy’ specified bound 32768 equals destination size [-Wstringop-truncation] 465 | strncpy (messbuf, message, BUFSIZE) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ messubs.c: In function ‘printToBuf.constprop’: messubs.c:811:3: warning: ‘strncpy’ specified bound 2000 equals destination size [-Wstringop-truncation] 811 | strncpy (buffer, message, buflen) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ messubs.c: In function ‘messerror’: messubs.c:446:3: warning: ‘strncpy’ specified bound 32768 equals destination size [-Wstringop-truncation] 446 | strncpy (messbuf, message, BUFSIZE) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ messubs.c: In function ‘messErrorCond’: messubs.c:638:2: warning: ‘strncpy’ specified bound 32768 equals destination size [-Wstringop-truncation] 638 | strncpy (messbuf, message, BUFSIZE) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ messubs.c: In function ‘messQuery’: messubs.c:700:5: warning: ‘strncpy’ specified bound 32768 equals destination size [-Wstringop-truncation] 700 | strncpy (messbuf, message, BUFSIZE) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o memsubs.o memsubs.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o arraysub.o arraysub.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o liste.o liste.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o filsubs.o filsubs.c filsubs.c: In function ‘filAge’: filsubs.c:1025:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1025 | if (diffYears) | ^~ filsubs.c:1028:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1028 | if (diffMonths) | ^~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o msort.o msort.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o heap.o heap.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o timesubs.o timesubs.c timesubs.c: In function ‘timeStruct’: timesubs.c:242:15: warning: unused variable ‘save’ [-Wunused-variable] 242 | struct tm save = *tm; | ^~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o bump.o bump.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o randsubs.o randsubs.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o call.o call.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o menu.o menu.c menu.c: In function ‘menuAddItem’: menu.c:150:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 150 | { for (below = menu->items ; | ^~~ menu.c:153:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 153 | if (!below) | ^~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o dict.o dict.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o helpsubs.o helpsubs.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o texthelp.o texthelp.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o utils.o utils.c utils.c: In function ‘strcasestr’: utils.c:780:3: warning: ‘g_strup’ is deprecated [-Wdeprecated-declarations] 780 | g_strup(str1); | ^~~~~~~ In file included from /usr/include/glib-2.0/glib.h:82, from utils.c:45: /usr/include/glib-2.0/glib/gstrfuncs.h:210:23: note: declared here 210 | gchar* g_strup (gchar *string); | ^~~~~~~ utils.c:781:3: warning: ‘g_strup’ is deprecated [-Wdeprecated-declarations] 781 | g_strup(str2); | ^~~~~~~ In file included from /usr/include/glib-2.0/glib.h:82, from utils.c:45: /usr/include/glib-2.0/glib/gstrfuncs.h:210:23: note: declared here 210 | gchar* g_strup (gchar *string); | ^~~~~~~ utils.c: In function ‘utPrintfSizeOfArgList’: utils.c:906:32: warning: variable ‘fVal’ set but not used [-Wunused-but-set-variable] 906 | void *pVal; int iVal; double fVal; | ^~~~ utils.c:906:19: warning: variable ‘iVal’ set but not used [-Wunused-but-set-variable] 906 | void *pVal; int iVal; double fVal; | ^~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o vtxt.o vtxt.c vtxt.c: In function ‘vtxtRemoveBetween’: vtxt.c:147:24: warning: variable ‘cs’ set but not used [-Wunused-but-set-variable] 147 | char *cp, *cq, *cr, *cs ; | ^~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o acein.o acein.c acein.c: In function ‘aceInPrompt’: acein.c:459:9: warning: variable ‘cp’ set but not used [-Wunused-but-set-variable] 459 | char *cp = 0 ; | ^~ acein.c: In function ‘aceInOptPrompt’: acein.c:504:9: warning: variable ‘cp’ set but not used [-Wunused-but-set-variable] 504 | char *cp; | ^~ acein.c: In function ‘aceInGetChar’: acein.c:2045:8: warning: implicit declaration of function ‘add_history’ [-Wimplicit-function-declaration] 2045 | add_history(fi->stream[fi->streamlevel].text); | ^~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o aceout.o aceout.c In file included from aceout.c:36: aceout.c: In function ‘aceTmpCreateDir’: aceout.c:648:22: warning: passing argument 1 of ‘strnew_dbg’ discards ‘const’ qualifier from pointer target type [-Wdiscarded-qualifiers] 648 | dirname = strnew(dir, 0) ; | ^~~ ../wh/regular.h:205:46: note: in definition of macro ‘strnew’ 205 | #define strnew(oldstring, handle) strnew_dbg(oldstring, handle,__FILE__,__LINE__) | ^~~~~~~~~ ../wh/regular.h:159:24: note: expected ‘char *’ but argument is of type ‘const char *’ 159 | char *strnew_dbg(char *old, STORE_HANDLE handle, | ~~~~~~^~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o strsubs.o strsubs.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o getopt.o getopt.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o getopt1.o getopt1.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o chronoexe.o chronoexe.c ar rlu libfree.a aceversion.o freesubs.o freeout.o messubs.o memsubs.o arraysub.o liste.o filsubs.o msort.o heap.o timesubs.o bump.o randsubs.o call.o menu.o dict.o helpsubs.o texthelp.o utils.o vtxt.o acein.o aceout.o strsubs.o getopt.o getopt1.o chronoexe.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating libfree.a gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o md5c.o md5c.c ar rlu libmd5.a md5c.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating libmd5.a gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c makeUserPasswd.c gcc -g -Wl,-z,relro -Wl,-z,now -o makeUserPasswd makeUserPasswd.o -L. -lfree -lmd5 -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: ./libfree.a(filsubs.o): in function `filTmpOpenWithSuffix': ./bin.LINUX_4/filsubs.c:588: warning: the use of `tempnam' is dangerous, better use `mkstemp' make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making acediff for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c acediff.c acediff.c: In function ‘printFilePart’: acediff.c:103:7: warning: unused variable ‘c’ [-Wunused-variable] 103 | int c; | ^ gcc -g -Wl,-z,relro -Wl,-z,now -o acediff acediff.o -L. -lfree -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: ./libfree.a(filsubs.o): in function `filTmpOpenWithSuffix': ./bin.LINUX_4/filsubs.c:588: warning: the use of `tempnam' is dangerous, better use `mkstemp' make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making acediffsorted for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c acediffsorted.c acediffsorted.c: In function ‘oneLine_next_Object’: acediffsorted.c:150:29: warning: variable ‘isDNA’ set but not used [-Wunused-but-set-variable] 150 | BOOL isAObj, isLongText, isDNA; | ^~~~~ acediffsorted.c: In function ‘processDiff’: acediffsorted.c:367:18: warning: variable ‘obCurrB’ set but not used [-Wunused-but-set-variable] 367 | Stack obCurrA, obCurrB; | ^~~~~~~ gcc -g -Wl,-z,relro -Wl,-z,now -o acediffsorted acediffsorted.o -L. -lfree -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: ./libfree.a(filsubs.o): in function `filTmpOpenWithSuffix': ./bin.LINUX_4/filsubs.c:588: warning: the use of `tempnam' is dangerous, better use `mkstemp' make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making pmapace for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o pmapace2.o pmapace2.c pmapace2.c:91:6: warning: return type of ‘main’ is not ‘int’ [-Wmain] 91 | void main (int argc, char **argv) | ^~~~ pmapace2.c: In function ‘main’: pmapace2.c:187:18: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 187 | if (*remark) | ^ pmapace2.c:176:8: warning: ‘strncpy’ output may be truncated copying 8 bytes from a string of length 255 [-Wstringop-truncation] 176 | strncpy (gene,&buffer[3],8) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ pmapace2.c:180:8: warning: ‘strncpy’ output may be truncated copying 40 bytes from a string of length 255 [-Wstringop-truncation] 180 | strncpy (remark,&buffer[11],40) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -Wl,-z,relro -Wl,-z,now -o pmapace pmapace2.o -L. -lfree -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: ./libfree.a(filsubs.o): in function `filTmpOpenWithSuffix': ./bin.LINUX_4/filsubs.c:588: warning: the use of `tempnam' is dangerous, better use `mkstemp' make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making diskdump for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o diskdump.o diskdump.c diskdump.c:96:6: warning: return type of ‘main’ is not ‘int’ [-Wmain] 96 | void main (int argc, char **argv) | ^~~~ gcc -g -Wl,-z,relro -Wl,-z,now -o diskdump diskdump.o -L. -lfree -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: ./libfree.a(filsubs.o): in function `filTmpOpenWithSuffix': ./bin.LINUX_4/filsubs.c:588: warning: the use of `tempnam' is dangerous, better use `mkstemp' make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making diskfix for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o diskfix.o diskfix.c diskfix.c:55:6: warning: return type of ‘main’ is not ‘int’ [-Wmain] 55 | void main (int argc, char **argv) | ^~~~ gcc -g -Wl,-z,relro -Wl,-z,now -o diskfix diskfix.o -L. -lfree -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: ./libfree.a(filsubs.o): in function `filTmpOpenWithSuffix': ./bin.LINUX_4/filsubs.c:588: warning: the use of `tempnam' is dangerous, better use `mkstemp' make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making metacheck for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o command.o command.c command.c: In function ‘aceCommandExecute’: command.c:1284:13: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 1284 | BOOL result = FALSE ; | ^~~~~~ command.c: In function ‘commandDoSMap’: command.c:4300:16: warning: ‘status’ may be used uninitialized in this function [-Wmaybe-uninitialized] 4300 | if ((status & bit) && (string = sMapErrorString(status&bit))) | ~~~~~~~~^~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o commandmenu.o commandmenu.c commandmenu.c: In function ‘aceCommandCheckForFiles’: commandmenu.c:451:9: warning: variable ‘dummy’ set but not used [-Wunused-but-set-variable] 451 | char *dummy ; | ^~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o session.o session.c session.c: In function ‘sessionInit’: session.c:795:18: warning: variable ‘context’ set but not used [-Wunused-but-set-variable] 795 | SessionContext context = NULL ; | ^~~~~~~ session.c: In function ‘getConfiguredDatabaseName’: session.c:1832:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1832 | if (db_io); | ^~ session.c:1833:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1833 | { | ^ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o dbpath.o dbpath.c dbpath.c: In function ‘dbPathInit’: dbpath.c:43:9: warning: unused variable ‘cp’ [-Wunused-variable] 43 | char *cp; | ^~ dbpath.c: In function ‘dbPathFilName’: dbpath.c:162:7: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 162 | if (ret = filGetName(stackText(s, 0), ending, spec, handle)) | ^~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o aceutils.o aceutils.c aceutils.c: In function ‘simpleCrashRoutine’: aceutils.c:94:3: warning: implicit declaration of function ‘sessionReleaseWriteAccess’ [-Wimplicit-function-declaration] 94 | sessionReleaseWriteAccess() ; /* must remove lock file */ | ^~~~~~~~~~~~~~~~~~~~~~~~~ aceutils.c:95:3: warning: implicit declaration of function ‘readlockDeleteFile’ [-Wimplicit-function-declaration] 95 | readlockDeleteFile (); /* release readlock */ | ^~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o banner.o banner.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o queryexe.o queryexe.c queryexe.c:2088:13: warning: ‘cdtDump’ defined but not used [-Wunused-function] 2088 | static void cdtDump(Stack s, CDT cdt, int level, BOOL isLeft) | ^~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o tabledefsubs.o tabledefsubs.c tabledefsubs.c: In function ‘spreadCheckConditions’: tabledefsubs.c:722:11: warning: variable ‘i1’ set but not used [-Wunused-but-set-variable] 722 | int i, i1, mine, n1, n2 ; | ^~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o tabledefio.o tabledefio.c tabledefio.c: In function ‘spreadSaveDefInObj’: tabledefio.c:322:8: warning: variable ‘buf’ set but not used [-Wunused-but-set-variable] 322 | char buf[2] ; | ^~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o flag.o flag.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o aql.o aql.c flex -l aqlparse.l yacc aqlparse.y mv y.tab.c aqlparse.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o aqlparse.o aqlparse.c y.tab.c: In function ‘yyparse’: y.tab.c:1406:16: warning: implicit declaration of function ‘yylex’ [-Wimplicit-function-declaration] y.tab.c:2182:7: warning: implicit declaration of function ‘yyerror’; did you mean ‘yyerrok’? [-Wimplicit-function-declaration] In file included from aqlparse.y:335: aqlparse.l: In function ‘yylex’: aqlparse.l:175:13: warning: array subscript has type ‘char’ [-Wchar-subscripts] 175 | [\@\$\;\:\.\(\)\[\]\+\-\*\/\%\,\_\|] token(yytext[0]) ; | ~~~~~~^~~ aqlparse.l:101:25: note: in definition of macro ‘token’ 101 | #define token(x) tokPos[x] = lexPos - yyleng ; return x | ^ In file included from aqlparse.y:335: lex.yy.c:1464:10: warning: implicit declaration of function ‘yywrap’ [-Wimplicit-function-declaration] 1464 | if ( yywrap( ) ) | ^~~~~~ In file included from aqlparse.y:335: aqlparse.l: At top level: aqlparse.l:218:6: warning: conflicting types for ‘yyerror’ 218 | void yyerror (char *s) | ^~~~~~~ y.tab.c:2182:7: note: previous implicit declaration of ‘yyerror’ was here In file included from aqlparse.y:335: lex.yy.c:1769:16: warning: ‘input’ defined but not used [-Wunused-function] 1769 | static int input (void) | ^~~~~ lex.yy.c:1722:17: warning: ‘yyunput’ defined but not used [-Wunused-function] 1722 | static void yyunput (int c, char * yy_bp ) | ^~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o aqlcheck.o aqlcheck.c aqlcheck.c: In function ‘preLocCheck’: aqlcheck.c:1194:23: warning: ‘originNode’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1194 | inNode->left = aqlCopyNode (originNode, aql); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ aqlcheck.c: In function ‘postTableProcess’: aqlcheck.c:1621:10: warning: ‘tableDefNode’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1621 | if (numberOfTableColumns(tableDefNode, aql) != 1) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o aqlrun.o aqlrun.c aqlrun.c: In function ‘evalExpr’: aqlrun.c:3170:18: warning: comparison between ‘BOOL’ and ‘enum ’ [-Wenum-compare] 3170 | if (isValueLeft == NULLVAL || isValueRight == NULLVAL || | ^~ aqlrun.c:3170:45: warning: comparison between ‘BOOL’ and ‘enum ’ [-Wenum-compare] 3170 | if (isValueLeft == NULLVAL || isValueRight == NULLVAL || | ^~ aqlrun.c:3171:18: warning: comparison between ‘BOOL’ and ‘enum ’ [-Wenum-compare] 3171 | isValueLeft == FUZZYVAL || isValueRight == FUZZYVAL) | ^~ aqlrun.c:3171:46: warning: comparison between ‘BOOL’ and ‘enum ’ [-Wenum-compare] 3171 | isValueLeft == FUZZYVAL || isValueRight == FUZZYVAL) | ^~ aqlrun.c:3174:22: warning: comparison between ‘BOOL’ and ‘enum ’ [-Wenum-compare] 3174 | if (isValueLeft == NULLVAL || isValueRight == NULLVAL) | ^~ aqlrun.c:3174:49: warning: comparison between ‘BOOL’ and ‘enum ’ [-Wenum-compare] 3174 | if (isValueLeft == NULLVAL || isValueRight == NULLVAL) | ^~ aqlrun.c:3195:26: warning: comparison between ‘BOOL’ and ‘enum ’ [-Wenum-compare] 3195 | isValueRight == KNOWNVAL ? TRUE : FALSE); /* non-booleans are TRUE if non-null */ | ^~ aqlrun.c:3199:25: warning: comparison between ‘BOOL’ and ‘enum ’ [-Wenum-compare] 3199 | isValueLeft == KNOWNVAL ? TRUE : FALSE, /* non-booleans are TRUE if non-null */ | ^~ In file included from ../wh/regular.h:566, from ../wh/acedb.h:50, from aqlrun.c:92: ../wh/array.h:100:51: warning: ‘last’ may be used uninitialized in this function [-Wmaybe-uninitialized] 100 | #define arr(ar,i,type) ((*(type*)((ar)->base + (i)*(ar)->size))) | ^ aqlrun.c:3050:21: note: ‘last’ was declared here 3050 | int first = -1, last, rowCount; | ^~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o aqlerror.o aqlerror.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o aqldebug.o aqldebug.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o keysetdump.o keysetdump.c keysetdump.c: In function ‘keySetParse’: keysetdump.c:281:19: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 281 | ParseFuncReturn result ; | ^~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o lexsubs4.o lexsubs4.c lexsubs4.c: In function ‘lexiread’: lexsubs4.c:528:26: warning: variable ‘lx2’ set but not used [-Wunused-but-set-variable] 528 | register LEXI1* lxi1, *lx2 ; | ^~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o lexalpha.o lexalpha.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o disknew.o disknew.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o blocksub.o blocksub.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o objcache.o objcache.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o idacedb.o idacedb.c idacedb.c: In function ‘idaAddName’: idacedb.c:317:7: warning: the address of ‘name’ will always evaluate as ‘true’ [-Waddress] 317 | if (!name || !*name || | ^ idacedb.c:317:16: warning: the address of ‘name’ will always evaluate as ‘true’ [-Waddress] 317 | if (!name || !*name || | ^ idacedb.c: In function ‘idControl’: idacedb.c:973:13: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 973 | if (statusOK (fo, ix)) | ^ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o idcurate.o idcurate.c idcurate.c: In function ‘idError’: idcurate.c:51:10: warning: implicit declaration of function ‘idaError’; did you mean ‘idError’? [-Wimplicit-function-declaration] 51 | { return idaError (ix) ; } | ^~~~~~~~ | idError idcurate.c: In function ‘idKill’: idcurate.c:60:10: warning: implicit declaration of function ‘idaKill’; did you mean ‘idKill’? [-Wimplicit-function-declaration] 60 | { return idaKill (ix, domain, id, 0) ; } | ^~~~~~~ | idKill idcurate.c: In function ‘idResurrect’: idcurate.c:63:10: warning: implicit declaration of function ‘idaResurrect’; did you mean ‘idResurrect’? [-Wimplicit-function-declaration] 63 | { return idaResurrect (ix, domain, id, 0) ; } | ^~~~~~~~~~~~ | idResurrect idcurate.c: In function ‘idMerge’: idcurate.c:66:10: warning: implicit declaration of function ‘idaMerge’; did you mean ‘idMerge’? [-Wimplicit-function-declaration] 66 | { return idaMerge (ix, domain, source, target, 0) ; } | ^~~~~~~~ | idMerge idcurate.c: In function ‘idAddName’: idcurate.c:72:10: warning: implicit declaration of function ‘idaAddName’; did you mean ‘idAddName’? [-Wimplicit-function-declaration] 72 | { return idaAddName (ix, domain, id, nameType, name, 0) ; } | ^~~~~~~~~~ | idAddName idcurate.c: In function ‘idRemoveName’: idcurate.c:75:10: warning: implicit declaration of function ‘idaRemoveName’; did you mean ‘idRemoveName’? [-Wimplicit-function-declaration] 75 | { return idaRemoveName (ix, domain, id, nameType, name, 0) ; } | ^~~~~~~~~~~~~ | idRemoveName idcurate.c: In function ‘idVersion’: idcurate.c:96:10: warning: implicit declaration of function ‘idaVersion’; did you mean ‘idVersion’? [-Wimplicit-function-declaration] 96 | { return idaVersion (ix, domain, id) ; } | ^~~~~~~~~~ | idVersion idcurate.c: In function ‘idLive’: idcurate.c:99:10: warning: implicit declaration of function ‘idaLive’; did you mean ‘idLive’? [-Wimplicit-function-declaration] 99 | { return idaLive (ix, domain, id) ; } | ^~~~~~~ | idLive idcurate.c: In function ‘idExists’: idcurate.c:108:10: warning: implicit declaration of function ‘idaExists’; did you mean ‘idExists’? [-Wimplicit-function-declaration] 108 | { return idaExists (ix, domain, id) ; } | ^~~~~~~~~ | idExists idcurate.c: In function ‘idCreateDomain’: idcurate.c:117:10: warning: implicit declaration of function ‘idaCreateDomain’; did you mean ‘idCreateDomain’? [-Wimplicit-function-declaration] 117 | { return idaCreateDomain (ix, domain) ; } | ^~~~~~~~~~~~~~~ | idCreateDomain idcurate.c: In function ‘idSetTemplate’: idcurate.c:120:10: warning: implicit declaration of function ‘idaSetTemplate’; did you mean ‘idSetTemplate’? [-Wimplicit-function-declaration] 120 | { return idaSetTemplate (ix, domain, template) ; } | ^~~~~~~~~~~~~~ | idSetTemplate idcurate.c: In function ‘idAddNameType’: idcurate.c:124:10: warning: implicit declaration of function ‘idaAddNameType’; did you mean ‘idAddNameType’? [-Wimplicit-function-declaration] 124 | { return idaAddNameType (ix, domain, isUnique, isPrimary) ; } | ^~~~~~~~~~~~~~ | idAddNameType gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o bs2block.o bs2block.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o adisk.o adisk.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o acache.o acache.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o bsubs.o bsubs.c bsubs.c: In function ‘Binit’: bsubs.c:104:7: warning: ‘memset’ used with constant zero length parameter; this could be due to transposed parameters [-Wmemset-transposed-args] 104 | memset (&Bnull, BLOC_SIZE, 0) ; | ^~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o bstree.o bstree.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o bstools.o bstools.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o keyset.o keyset.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o bsdumps.o bsdumps.c bsdumps.c: In function ‘bsAceDumpCell’: bsdumps.c:202:9: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else] 202 | if (dumpTimeStamps || (bst->size & DUMP_FLAG)) | ^ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o nicedump.o nicedump.c nicedump.c: In function ‘niceBSXML’: nicedump.c:640:6: warning: variable ‘bs_down’ set but not used [-Wunused-but-set-variable] 640 | BS bs_down ; | ^~~~~~~ nicedump.c: In function ‘niceTextXMLSchema’: nicedump.c:956:14: warning: unused variable ‘my_name’ [-Wunused-variable] 956 | char *my_name = name((bs->right)->key) ; | ^~~~~~~ nicedump.c:895:9: warning: variable ‘debug’ set but not used [-Wunused-but-set-variable] 895 | char *debug ; | ^~~~~ At top level: nicedump.c:103:13: warning: ‘debug’ defined but not used [-Wunused-variable] 103 | static BOOL debug = FALSE ; | ^~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o asubs.o asubs.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o bssubs.o bssubs.c bssubs.c: In function ‘bsAddData’: bssubs.c:1440:20: warning: null argument where non-null required (argument 1) [-Wnonnull] 1440 | { if (!strcmp (bsText(bs),(char*)xp)) | ^~~~~~ bssubs.c: In function ‘bsSubFuse’: bssubs.c:2478:7: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 2478 | { for (bs = bs->right ; | ^~~ bssubs.c:2481:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 2481 | bs->down = top ; | ^~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o check.o check.c check.c: In function ‘checkData’: check.c:94:9: warning: variable ‘x’ set but not used [-Wunused-but-set-variable] 94 | float x ; | ^ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o dnasubs.o dnasubs.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o dnacode.o dnacode.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o peptide.o peptide.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o matchtable.o matchtable.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o basepad.o basepad.c basepad.c:152:13: warning: ‘depadSequence’ defined but not used [-Wunused-function] 152 | static int *depadSequence (KEY seq, BOOL defragment) | ^~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o smap.o smap.c smap.c: In function ‘sMapReMap’: smap.c:927:9: warning: unused variable ‘reverse_local_map’ [-Wunused-variable] 927 | Array reverse_local_map, parent_map ; | ^~~~~~~~~~~~~~~~~ At top level: smap.c:2466:19: warning: ‘clipLocalMap’ defined but not used [-Wunused-function] 2466 | static SMapStatus clipLocalMap(int p_start, int p_end, Array local_map, Strand strand, | ^~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o class.o class.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o sysclass.o sysclass.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o tags.o tags.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o model.o model.c model.c: In function ‘getNewModels’: model.c:733:3: warning: implicit declaration of function ‘lexAlphaClassList’ [-Wimplicit-function-declaration] 733 | lexAlphaClassList (TRUE) ; /* re alpha order class names */ | ^~~~~~~~~~~~~~~~~ model.c:600:18: warning: variable ‘oldKey’ set but not used [-Wunused-but-set-variable] 600 | KEY key = 0, oldKey = 0 ; | ^~~~~~ At top level: model.c:488:13: warning: ‘treeCompare’ defined but not used [-Wunused-function] 488 | static BOOL treeCompare(BS one, BS two) | ^~~~~~~~~~~ In file included from ../wh/regular.h:566, from ../wh/acedb.h:50, from model.c:36: model.c: In function ‘getNewModels.part.0’: ../wh/array.h:103:35: warning: ‘level’ may be used uninitialized in this function [-Wmaybe-uninitialized] 103 | #define array(ar,i,type) (*(type*)uArray_dbg(ar,i, __FILE__, __LINE__)) | ^~~~~~~~~~ model.c:603:11: note: ‘level’ was declared here 603 | int i,level ; | ^~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o longtext.o longtext.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o quovadis.o quovadis.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o picksubs.o picksubs.c picksubs.c: In function ‘pickGetClassProperties’: picksubs.c:297:10: warning: type defaults to ‘int’ in declaration of ‘displayOK’ [-Wimplicit-int] 297 | static displayOK = FALSE; | ^~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o alignment.o alignment.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o logsubs.o logsubs.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o sigsubs.o sigsubs.c sigsubs.c: In function ‘getSignalText’: sigsubs.c:486:28: warning: initialization of ‘char **’ from incompatible pointer type ‘const char * const*’ [-Wincompatible-pointer-types] 486 | char **signal_textlist = &(_sys_siglist[0]) ; | ^ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o prefsubs.o prefsubs.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from ../wh/gex.h:36, from prefsubs.c:56: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from prefsubs.c:56: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from ../wh/gex.h:36, from prefsubs.c:56: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from prefsubs.c:56: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o status.o status.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o bindex.o bindex.c bindex.c: In function ‘bIndexNewModels’: bindex.c:743:16: warning: variable ‘kk’ set but not used [-Wunused-but-set-variable] 743 | int i, nBix, kk, nIndexedClasses ; | ^~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o acelib.o acelib.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o table.o table.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o apputils.o apputils.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o acinside.o acinside.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o actable.o actable.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -DNON_GRAPHIC -c parse.c -o parse.ng.o gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -DNON_GRAPHIC -c dump.c -o dump.ng.o dump.c: In function ‘dumpKey2’: dump.c:253:20: warning: implicit declaration of function ‘dnaDumpKeyCstyle’ [-Wimplicit-function-declaration] 253 | { dnaDumpKeyCstyle (dump_out, key); } | ^~~~~~~~~~~~~~~~ dump.c:255:20: warning: implicit declaration of function ‘peptideDumpKeyCstyle’ [-Wimplicit-function-declaration] 255 | { peptideDumpKeyCstyle (dump_out, key); } | ^~~~~~~~~~~~~~~~~~~~ dump.c: In function ‘dumpDoReadAll’: dump.c:699:8: warning: variable ‘dump_stats’ set but not used [-Wunused-but-set-variable] 699 | BOOL dump_stats = FALSE ; | ^~~~~~~~~~ dump.c: In function ‘dumpAll’: dump.c:1007:24: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 1007 | sprintf (dumpDir,"%s/", directory); | ^ dump.c:1007:3: note: ‘sprintf’ output between 2 and 4097 bytes into a destination of size 4096 1007 | sprintf (dumpDir,"%s/", directory); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -DNON_GRAPHIC -c biblio.c -o biblio.ng.o ar rlu libace.a command.o commandmenu.o session.o dbpath.o aceutils.o banner.o queryexe.o tabledefsubs.o tabledefio.o flag.o aql.o aqlparse.o aqlcheck.o aqlrun.o aqlerror.o aqldebug.o keysetdump.o lexsubs4.o lexalpha.o disknew.o blocksub.o objcache.o idacedb.o idcurate.o bs2block.o adisk.o acache.o bsubs.o bstree.o bstools.o keyset.o bsdumps.o nicedump.o asubs.o bssubs.o check.o dnasubs.o dnacode.o peptide.o matchtable.o basepad.o smap.o class.o sysclass.o tags.o model.o longtext.o quovadis.o picksubs.o alignment.o logsubs.o sigsubs.o prefsubs.o status.o bindex.o acelib.o table.o apputils.o acinside.o actable.o parse.ng.o dump.ng.o biblio.ng.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating libace.a gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o metadata.o metadata.c metadata.c: In function ‘main’: metadata.c:190:5: warning: implicit declaration of function ‘aceInit’ [-Wimplicit-function-declaration] 190 | aceInit(argv[1]); | ^~~~~~~ gcc -g -Wl,-z,relro -Wl,-z,now -o metacheck metadata.o -L. -lace -lfree -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: ./libfree.a(filsubs.o): in function `filTmpOpenWithSuffix': ./bin.LINUX_4/filsubs.c:588: warning: the use of `tempnam' is dangerous, better use `mkstemp' make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making homonym for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o homonym.o homonym.c homonym.c: In function ‘readRules’: homonym.c:127:7: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 127 | if(cp = freewordcut("\n",&cutter)) | ^~ homonym.c: At top level: homonym.c:164:6: warning: return type of ‘main’ is not ‘int’ [-Wmain] 164 | void main (int argc, char **arg) | ^~~~ gcc -g -Wl,-z,relro -Wl,-z,now -o homonym homonym.o -L. -lfree -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: ./libfree.a(filsubs.o): in function `filTmpOpenWithSuffix': ./bin.LINUX_4/filsubs.c:588: warning: the use of `tempnam' is dangerous, better use `mkstemp' make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making tagcount for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c tagcount.c gcc -g -Wl,-z,relro -Wl,-z,now -o tagcount tagcount.o -L. -lace -lfree -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: ./libfree.a(filsubs.o): in function `filTmpOpenWithSuffix': ./bin.LINUX_4/filsubs.c:588: warning: the use of `tempnam' is dangerous, better use `mkstemp' make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making blixem for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphgtk.o graphgtk.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from graphgtk.c:37: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from graphgtk.c:37: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from graphgtk.c:37: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from graphgtk.c:37: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ graphgtk.c: In function ‘installRemoteAtoms’: graphgtk.c:1169:9: warning: pointer targets in passing argument 6 of ‘gdk_property_change’ differ in signedness [-Wpointer-sign] 1169 | versionString, | ^~~~~~~~~~~~~ | | | char * In file included from /usr/include/gtk-2.0/gdk/gdk.h:50, from /usr/include/gtk-2.0/gtk/gtk.h:32, from graphgtk.c:37: /usr/include/gtk-2.0/gdk/gdkproperty.h:65:25: note: expected ‘const guchar *’ {aka ‘const unsigned char *’} but argument is of type ‘char *’ 65 | const guchar *data, | ~~~~~~~~~~~~~~~^~~~ graphgtk.c:1177:9: warning: pointer targets in passing argument 6 of ‘gdk_property_change’ differ in signedness [-Wpointer-sign] 1177 | appName, | ^~~~~~~ | | | char * In file included from /usr/include/gtk-2.0/gdk/gdk.h:50, from /usr/include/gtk-2.0/gtk/gtk.h:32, from graphgtk.c:37: /usr/include/gtk-2.0/gdk/gdkproperty.h:65:25: note: expected ‘const guchar *’ {aka ‘const unsigned char *’} but argument is of type ‘char *’ 65 | const guchar *data, | ~~~~~~~~~~~~~~~^~~~ graphgtk.c: In function ‘keyboardEvent’: graphgtk.c:1183:8: warning: unused variable ‘result’ [-Wunused-variable] 1183 | gint result = TRUE ; | ^~~~~~ graphgtk.c: In function ‘changeCursor’: graphgtk.c:1437:58: warning: pointer targets in passing argument 2 of ‘gdk_bitmap_create_from_data’ differ in signedness [-Wpointer-sign] 1437 | GdkPixmap *bm = gdk_bitmap_create_from_data (NULL, nenty_bits, | ^~~~~~~~~~ | | | unsigned char * In file included from /usr/include/gtk-2.0/gdk/gdk.h:49, from /usr/include/gtk-2.0/gtk/gtk.h:32, from graphgtk.c:37: /usr/include/gtk-2.0/gdk/gdkpixmap.h:75:20: note: expected ‘const gchar *’ {aka ‘const char *’} but argument is of type ‘unsigned char *’ 75 | const gchar *data, | ~~~~~~~~~~~~~^~~~ graphgtk.c: In function ‘selection_received’: graphgtk.c:1705:44: warning: pointer targets in passing argument 2 of ‘graphCBPaste’ differ in signedness [-Wpointer-sign] 1705 | graphCBPaste(dev->graph, selection_data->data); | ~~~~~~~~~~~~~~^~~~~~ | | | guchar * {aka unsigned char *} In file included from graphgtk.c:54: ../w2/graphdev.h:348:41: note: expected ‘char *’ but argument is of type ‘guchar *’ {aka ‘unsigned char *’} 348 | void graphCBPaste(GraphPtr graph, char *text); | ~~~~~~^~~~ graphgtk.c: In function ‘keyboardEvent’: graphgtk.c:1341:22: warning: ‘kval’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1341 | if (dev->hasChrome && (kval == TAB_KEY)) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphgdk.o graphgdk.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from graphgdk.c:36: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from graphgdk.c:36: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from graphgdk.c:36: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from graphgdk.c:36: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ graphgdk.c: In function ‘graphGtkSetGreyMap’: graphgdk.c:378:10: warning: type defaults to ‘int’ in declaration of ‘usingPrivate’ [-Wimplicit-int] 378 | static usingPrivate = FALSE; | ^~~~~~~~~~~~ graphgdk.c: In function ‘devGtkSetBoxDefaults’: graphgdk.c:512:3: warning: ‘gdk_style’ may be used uninitialized in this function [-Wmaybe-uninitialized] 512 | gdk_gc_set_line_attributes(gc, currLineWidth_G, currLineStyle_G, GDK_CAP_ROUND, GDK_JOIN_ROUND); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ graphgdk.c: In function ‘devGtkSetLineStyle’: graphgdk.c:487:3: warning: ‘gdk_style’ may be used uninitialized in this function [-Wmaybe-uninitialized] 487 | gdk_gc_set_line_attributes(gc, currLineWidth_G, currLineStyle_G, GDK_CAP_ROUND, GDK_JOIN_ROUND) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ graphgdk.c: In function ‘devGtkScreenSize’: graphgdk.c:267:30: warning: ‘fh’ may be used uninitialized in this function [-Wmaybe-uninitialized] 267 | if (fy) *fy = (float)height/fh ; | ~~~~~~~~~~~~~^~~ graphgdk.c:266:29: warning: ‘fw’ may be used uninitialized in this function [-Wmaybe-uninitialized] 266 | if (fx) *fx = (float)width/fw ; | ~~~~~~~~~~~~^~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphgdkremote.o graphgdkremote.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from graphgdkremote.c:90: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from graphgdkremote.c:88: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from graphgdkremote.c:90: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from graphgdkremote.c:88: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ graphgdkremote.c: In function ‘devGtkWebBrowser’: graphgdkremote.c:280:8: warning: variable ‘result’ set but not used [-Wunused-but-set-variable] 280 | BOOL result = FALSE ; | ^~~~~~ In file included from graphgdkremote.c:106: At top level: ../w2/vroot.h:65:1: warning: ‘VirtualRootWindowOfScreen’ defined but not used [-Wunused-function] 65 | VirtualRootWindowOfScreen(screen) | ^~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o gexhelp.o gexhelp.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from ../wh/gex.h:36, from gexhelp.c:43: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from gexhelp.c:43: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from ../wh/gex.h:36, from gexhelp.c:43: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from gexhelp.c:43: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gexhelp.c:88:5: warning: initialization of ‘void (*)(struct _MenuItemStruct *)’ from incompatible pointer type ‘void (*)(void)’ [-Wincompatible-pointer-types] 88 | { helpButtonGoBack, "Back"}, | ^~~~~~~~~~~~~~~~ gexhelp.c:88:5: note: (near initialization for ‘helpViewMenu[0].f’) gexhelp.c:89:5: warning: initialization of ‘void (*)(struct _MenuItemStruct *)’ from incompatible pointer type ‘void (*)(void)’ [-Wincompatible-pointer-types] 89 | { helpButtonGoForward, "Forward"}, | ^~~~~~~~~~~~~~~~~~~ gexhelp.c:89:5: note: (near initialization for ‘helpViewMenu[1].f’) gexhelp.c: In function ‘gexHtmlViewer’: gexhelp.c:253:2: warning: implicit declaration of function ‘graphMenuBar’; did you mean ‘graphMenu’? [-Wimplicit-function-declaration] 253 | graphMenuBar(menuBar); | ^~~~~~~~~~~~ | graphMenu gexhelp.c: In function ‘printSection’: gexhelp.c:592:5: warning: variable ‘MODE_HEADER’ set but not used [-Wunused-but-set-variable] 592 | MODE_HEADER=FALSE, | ^~~~~~~~~~~ gexhelp.c:587:22: warning: variable ‘hrefCp’ set but not used [-Wunused-but-set-variable] 587 | char *cp, *start, *hrefCp ; | ^~~~~~ gexhelp.c:646:4: warning: ‘oldFontHeight’ may be used uninitialized in this function [-Wmaybe-uninitialized] 646 | graphTextHeight (oldFontHeight) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gexhelp.c:644:4: warning: ‘oldFont’ may be used uninitialized in this function [-Wmaybe-uninitialized] 644 | graphTextFormat (oldFont) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~ gexhelp.c: In function ‘gexHtmlViewer’: gexhelp.c:177:3: warning: ‘strncpy’ specified bound 4096 equals destination size [-Wstringop-truncation] 177 | strncpy (currHelpFilename, helpFilename, MAXPATHLEN); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o gexramptool.o gexramptool.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from gexramptool.c:44: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from gexramptool.c:44: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from gexramptool.c:44: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from gexramptool.c:44: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gexramptool.c: In function ‘colorDragSlider’: gexramptool.c:265:2: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 265 | else | ^~~~ gexramptool.c:267:4: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 267 | if (x < BORDER) x = BORDER+1; | ^~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o gex.o gex.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from gex.c:58: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from gex.c:58: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from gex.c:58: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from gex.c:58: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ gex.c: In function ‘gexSplash’: gex.c:630:13: warning: Deprecated pre-processor symbol, replace with 630 | while(g_main_iteration(FALSE)); | ^~~~~~~~~~~~~~~~~~~~~ gex.c: In function ‘ButtonPressCallback’: gex.c:1870:19: warning: variable ‘accel_group’ set but not used [-Wunused-but-set-variable] 1870 | GtkAccelGroup *accel_group; | ^~~~~~~~~~~ At top level: gex.c:872:13: warning: ‘ace_file_selection_dir_button’ defined but not used [-Wunused-function] 872 | static void ace_file_selection_dir_button (GtkWidget *widget, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ar rlu libgex.a graphgtk.o graphgdk.o graphgdkremote.o gexhelp.o gexramptool.o gex.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating libgex.a gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphcon.o graphcon.c graphcon.c: In function ‘graphWindowSize’: graphcon.c:858:7: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 858 | if (wx) *wx = x ; if (ww) *ww = width/(float)screenx ; | ^~ graphcon.c:858:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 858 | if (wx) *wx = x ; if (ww) *ww = width/(float)screenx ; | ^~ graphcon.c:859:7: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 859 | if (wy) *wy = y ; if (wh) *wh = height/(float)screeny ; | ^~ graphcon.c:859:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 859 | if (wy) *wy = y ; if (wh) *wh = height/(float)screeny ; | ^~ In file included from graphcon.c:74: At top level: ../wh/version.h:133:20: warning: ‘ut_copyright_string’ defined but not used [-Wunused-variable] 133 | static const char *ut_copyright_string = \ | ^~~~~~~~~~~~~~~~~~~ graphcon.c:94:1: note: in expansion of macro ‘UT_COPYRIGHT_STRING’ 94 | UT_COPYRIGHT_STRING(GRAPH_TITLE, GRAPH_VERSION, GRAPH_RELEASE, GRAPH_UPDATE, GRAPH_DESC) | ^~~~~~~~~~~~~~~~~~~ graphcon.c: In function ‘graphTextBounds’: graphcon.c:750:2: warning: ‘graphdev_type’ may be used uninitialized in this function [-Wmaybe-uninitialized] 750 | gDevFunc->graphDevSetBaseWinSize(gDev, gGetGraphDevGraphType(gActive->type), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 | nx * gActive->xFac, | ~~~~~~~~~~~~~~~~~~~ 752 | ny * gActive->yFac); | ~~~~~~~~~~~~~~~~~~~ graphcon.c:746:2: warning: ‘graphdev_type’ may be used uninitialized in this function [-Wmaybe-uninitialized] 746 | gDevFunc->graphDevSetNakedWinSize(gDev, gGetGraphDevGraphType(gActive->type), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 | nx * gActive->xFac, | ~~~~~~~~~~~~~~~~~~~ 748 | ny * gActive->yFac); | ~~~~~~~~~~~~~~~~~~~ graphcon.c: In function ‘graphFakeBounds’: graphcon.c:768:5: warning: ‘graphdev_type’ may be used uninitialized in this function [-Wmaybe-uninitialized] 768 | gDevFunc->graphDevSetBaseWinSize(gDev, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 | gGetGraphDevGraphType(gActive->type), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 | 0, gActive->h) ; | ~~~~~~~~~~~~~~ graphcon.c: In function ‘graphRawBounds’: graphcon.c:811:5: warning: ‘graphdev_type’ may be used uninitialized in this function [-Wmaybe-uninitialized] 811 | gDevFunc->graphDevSetBaseWinSize(gDev, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 | gGetGraphDevGraphType(gActive->type), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 | gActive->w, | ~~~~~~~~~~~ 814 | gActive->h) ; | ~~~~~~~~~~~ graphcon.c: In function ‘realCreate’: graphcon.c:1275:5: warning: ‘graphdev_type’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1275 | gDevFunc->graphDevSetBaseWinSize(gDev, graph_type, graph->w, graph->h) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ graphcon.c: In function ‘gGetGraphDevEventType’: graphcon.c:1363:10: warning: ‘graphdev_event’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1363 | return graphdev_event ; | ^~~~~~~~~~~~~~ graphcon.c: In function ‘gGetGraphDevGraphType’: graphcon.c:1386:10: warning: ‘graphdev_type’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1386 | return graphdev_type ; | ^~~~~~~~~~~~~ graphcon.c: In function ‘gGetGraphDevFontFormat’: graphcon.c:1402:10: warning: ‘graphdev_format’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1402 | return graphdev_format ; | ^~~~~~~~~~~~~~~ graphcon.c: In function ‘gGetGraphDevLineStyle’: graphcon.c:1417:10: warning: ‘graphdev_style’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1417 | return graphdev_style ; | ^~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphsub.o graphsub.c graphsub.c: In function ‘drawBox’: graphsub.c:354:17: warning: unused variable ‘uintp’ [-Wunused-variable] 354 | unsigned int *uintp = stackNext (gStk, unsigned int*) ; | ^~~~~ graphsub.c:289:18: warning: variable ‘utext’ set but not used [-Wunused-but-set-variable] 289 | unsigned char *utext; | ^~~~~ graphsub.c: In function ‘graphBoxShift’: graphsub.c:2233:20: warning: unused variable ‘uintp’ [-Wunused-variable] 2233 | { unsigned int *uintp = stackNext (gStk, unsigned int*) ; | ^~~~~ graphsub.c:2280:10: warning: variable ‘gim’ set but not used [-Wunused-but-set-variable] 2280 | { void *gim = stackNext (gStk,void*) ; | ^~~ graphsub.c:2193:18: warning: variable ‘utext’ set but not used [-Wunused-but-set-variable] 2193 | unsigned char *utext; | ^~~~~ graphsub.c:2192:9: warning: variable ‘text’ set but not used [-Wunused-but-set-variable] 2192 | char* text ; | ^~~~ graphsub.c:2191:9: warning: variable ‘t’ set but not used [-Wunused-but-set-variable] 2191 | float t ; | ^ graphsub.c: In function ‘drawBox’: graphsub.c:687:8: warning: ‘newColor’ may be used uninitialized in this function [-Wmaybe-uninitialized] 687 | if (newColor != old) | ^ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphps.o graphps.c In file included from ../wh/regular.h:566, from graphps.c:49: graphps.c: In function ‘psDrawBox’: ../wh/array.h:222:54: warning: operation on ‘ps->graph->stack->pos’ may be undefined [-Wsequence-point] 222 | #define stackNext(stk,type) (*((type*)( ((stk)->pos += STACK_ALIGNMENT ) - \ | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ graphps.c:399:5: note: in expansion of macro ‘stackNext’ 399 | stackNext (ps->graph->stack, float)) ; | ^~~~~~~~~ ../wh/array.h:222:54: warning: operation on ‘ps->graph->stack->pos’ may be undefined [-Wsequence-point] 222 | #define stackNext(stk,type) (*((type*)( ((stk)->pos += STACK_ALIGNMENT ) - \ | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ graphps.c:406:9: note: in expansion of macro ‘stackNext’ 406 | stackNext (ps->graph->stack, float)) ; | ^~~~~~~~~ graphps.c:609:14: warning: variable ‘gim’ set but not used [-Wunused-but-set-variable] 609 | void* gim = stackNext (ps->graph->stack, void*) ; | ^~~ graphps.c: In function ‘graphPSdefaults’: graphps.c:787:19: warning: ‘pageHeight’ may be used uninitialized in this function [-Wmaybe-uninitialized] 787 | yfac = .996 * pageHeight / h ; | ~~~~~^~~~~~~~~~~~ graphps.c:786:19: warning: ‘pageWidth’ may be used uninitialized in this function [-Wmaybe-uninitialized] 786 | xfac = .996 * pageWidth / w ; | ~~~~~^~~~~~~~~~~ graphps.c: In function ‘graphPS’: graphps.c:912:11: warning: ‘pageHeight’ may be used uninitialized in this function [-Wmaybe-uninitialized] 912 | err = aceOutPrint(fo, "gsave\n%f %f translate -90 rotate ", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 | pageWidth, pageHeight) ; | ~~~~~~~~~~~~~~~~~~~~~~ graphps.c:912:11: warning: ‘pageWidth’ may be used uninitialized in this function [-Wmaybe-uninitialized] gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphgdi.o graphgdi.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphselect.o graphselect.c graphselect.c:49:13: warning: ‘popScrolledDraw’ declared ‘static’ but never defined [-Wunused-function] 49 | static void popScrolledDraw(FREEOPT *f) ; | ^~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphascii.o graphascii.c graphascii.c: In function ‘graphASCII’: graphascii.c:255:7: warning: variable ‘pages’ set but not used [-Wunused-but-set-variable] 255 | int pages ; | ^~~~~ graphascii.c:81:27: warning: ‘lenOld’ may be used uninitialized in this function [-Wmaybe-uninitialized] 81 | { bump->xGapAscii = c->x - lenOld - xOld ; | ~~~~~^~~~~~~~ graphascii.c:65:7: note: ‘lenOld’ was declared here 65 | int lenOld, xOld = -1 ; | ^~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphprint.o graphprint.c graphprint.c: In function ‘copyNameEnd’: graphprint.c:575:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 575 | for (cp = pd->filBuffer; *cp ; ++cp) ; --cp ; | ^~~ graphprint.c:575:42: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 575 | for (cp = pd->filBuffer; *cp ; ++cp) ; --cp ; | ^~ graphprint.c: In function ‘pdInit’: graphprint.c:1164:3: warning: ‘getwd’ is deprecated [-Wdeprecated-declarations] 1164 | else if (!getwd (result->dirBuffer)) | ^~~~ In file included from ../wh/mystdlib.h:238, from ../wh/regular.h:51, from graphprint.c:45: /usr/include/unistd.h:525:14: note: declared here 525 | extern char *getwd (char *__buf) | ^~~~~ graphprint.c: In function ‘pdDraw’: graphprint.c:961:7: warning: ‘ending’ may be used uninitialized in this function [-Wmaybe-uninitialized] 961 | sprintf (pd->copyBuffer, "%s/%s.%s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 | pd->dirBuffer, pd->filBuffer, ending) ; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ graphprint.c:904:23: warning: ‘box’ may be used uninitialized in this function [-Wmaybe-uninitialized] 904 | pd->firstBox = box + 1 - n ; | ~~~~^~~ graphprint.c: In function ‘copyNameEnd’: graphprint.c:606:5: warning: ‘ending’ may be used uninitialized in this function [-Wmaybe-uninitialized] 606 | sprintf (pd->copyBuffer, "%s%s.%s", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 607 | pd->dirBuffer, pd->filBuffer, ending) ; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ graphprint.c: In function ‘fileButton’: graphprint.c:490:13: warning: ‘mode’ may be used uninitialized in this function [-Wmaybe-uninitialized] 490 | tmp_fil = filqueryopen (pd->dirBuffer, pd->filBuffer, ending, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 | mode, "Print File") ; | ~~~~~~~~~~~~~~~~~~~ graphprint.c:490:13: warning: ‘ending’ may be used uninitialized in this function [-Wmaybe-uninitialized] graphprint.c: In function ‘graphPrint’: graphprint.c:1276:3: warning: ‘ending’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1276 | sprintf (lastPd->copyBuffer, "%s/%s.%s", lastPd->dirBuffer, lastPd->filBuffer, ending) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o filquery.o filquery.c filquery.c: In function ‘localQueryOpen’: filquery.c:516:11: warning: the address of ‘path’ will always evaluate as ‘true’ [-Waddress] 516 | if (!path || path[strlen(path)-1] != '/') /* avoid // */ | ^ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphgif.o graphgif.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o colcontrol.o colcontrol.c colcontrol.c: In function ‘controlSelectBox’: colcontrol.c:1106:6: warning: type of ‘box’ defaults to ‘int’ [-Wimplicit-int] 1106 | void controlSelectBox(box) | ^~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o viewedit.o viewedit.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o chronodisp.o chronodisp.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphcolour.o graphcolour.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphAcedbInterface.o graphAcedbInterface.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphremote.o graphremote.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphmesglist.o graphmesglist.c graphmesglist.c:82:13: warning: ‘mesgDestroy’ declared ‘static’ but never defined [-Wunused-function] 82 | static void mesgDestroy(void) ; | ^~~~~~~~~~~ graphmesglist.c: In function ‘mesgListDestroy’: graphmesglist.c:339:6: warning: ‘destroy_cb’ may be used uninitialized in this function [-Wmaybe-uninitialized] 339 | (*destroy_cb)() ; | ~^~~~~~~~~~~~~~ ar rlu libgraph.a graphcon.o graphsub.o graphps.o graphgdi.o graphselect.o graphascii.o graphprint.o filquery.o graphgif.o colcontrol.o viewedit.o chronodisp.o graphcolour.o graphAcedbInterface.o graphremote.o graphmesglist.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating libgraph.a gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o libgd.o libgd.c libgd.c: In function ‘gdImageCreateFromGif’: libgd.c:1640:12: warning: variable ‘AspectRatio’ set but not used [-Wunused-but-set-variable] 1640 | int AspectRatio; | ^~~~~~~~~~~ libgd.c:1639:12: warning: variable ‘Background’ set but not used [-Wunused-but-set-variable] 1639 | int Background; | ^~~~~~~~~~ libgd.c:1638:12: warning: variable ‘ColorResolution’ set but not used [-Wunused-but-set-variable] 1638 | int ColorResolution; | ^~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o gdfont6x9.o gdfont6x9.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o gdfont8x13.o gdfont8x13.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o gdfont8x13bold.o gdfont8x13bold.c ar rlu libgd.a libgd.o gdfont6x9.o gdfont8x13.o gdfont8x13bold.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating libgd.a gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o blixem.o blxview.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from ../wh/gex.h:36, from blxview.c:133: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from blxview.c:133: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from ../wh/gex.h:36, from blxview.c:133: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from blxview.c:133: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ blxview.c: In function ‘gotoMatch’: blxview.c:600:16: warning: variable ‘closest’ set but not used [-Wunused-but-set-variable] 600 | MSP *msp, *closest; | ^~~~~~~ blxview.c: In function ‘inRange’: blxview.c:1982:12: warning: type of ‘pos’ defaults to ‘int’ [-Wimplicit-int] 1982 | static int inRange(pos, start, end) | ^~~~~~~ blxview.c:1982:12: warning: type of ‘start’ defaults to ‘int’ [-Wimplicit-int] blxview.c:1982:12: warning: type of ‘end’ defaults to ‘int’ [-Wimplicit-int] blxview.c: In function ‘makeButtonBar’: blxview.c:3535:16: warning: variable ‘item’ set but not used [-Wunused-but-set-variable] 3535 | GtkToolItem *item ; | ^~~~ blxview.c: In function ‘blviewRedraw’: blxview.c:2576:4: warning: ‘DNAline’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2576 | graphText(get3rd_base(dispstart, dispstart + plusmin*(displen-1), q), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2577 | alignstart, DNAline++); | ~~~~~~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o blxmain.o blxmain.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from ../wh/gex.h:36, from blxmain.c:36: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from blxmain.c:36: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from ../wh/gex.h:36, from blxmain.c:36: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from blxmain.c:36: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ In file included from ../w9/blixem_.h:34, from blxmain.c:37: ../wh/version.h:133:20: warning: ‘ut_copyright_string’ defined but not used [-Wunused-variable] 133 | static const char *ut_copyright_string = \ | ^~~~~~~~~~~~~~~~~~~ blxmain.c:43:1: note: in expansion of macro ‘UT_COPYRIGHT_STRING’ 43 | UT_COPYRIGHT_STRING(BLIXEM_TITLE, BLIXEM_VERSION, BLIXEM_RELEASE, BLIXEM_UPDATE, BLIXEM_DESC) | ^~~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o blxparser.o blxparser.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from ../wh/gex.h:36, from blxparser.c:43: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from blxparser.c:43: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from ../wh/gex.h:36, from blxparser.c:43: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from blxparser.c:43: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ blxparser.c: In function ‘nextLine’: blxparser.c:1062:13: warning: Deprecated pre-processor symbol, replace with 1062 | g_string_sprintfa(line_string, "%s", &buffer[0]) ; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ blxparser.c: In function ‘parseFS’: blxparser.c:868:4: warning: ‘seqlen’ may be used uninitialized in this function [-Wmaybe-uninitialized] 868 | for (i = 0; i < seqlen; i++) | ^~~ blxparser.c:448:11: warning: ‘gap’ may be used uninitialized in this function [-Wmaybe-uninitialized] 448 | gap->r2 = atoi(next_gap); | ~~~~~~~~^~~~~~~~~~~~~~~~ blxparser.c:420:16: note: ‘gap’ was declared here 420 | SMapMap *gap ; | ^~~ blxparser.c:362:15: warning: ‘slen’ may be used uninitialized in this function [-Wmaybe-uninitialized] 362 | else if (qlen < slen) | ^ blxparser.c:262:18: note: ‘slen’ was declared here 262 | int i, qlen, slen; | ^~~~ blxparser.c:362:15: warning: ‘qlen’ may be used uninitialized in this function [-Wmaybe-uninitialized] 362 | else if (qlen < slen) | ^ blxparser.c:262:12: note: ‘qlen’ was declared here 262 | int i, qlen, slen; | ^~~~ blxparser.c:326:8: warning: ‘last’ may be used uninitialized in this function [-Wmaybe-uninitialized] 326 | strcat(msp->sname, last); | ^~~~~~~~~~~~~~~~~~~~~~~~ blxparser.c:317:21: note: ‘last’ was declared here 317 | char *db=p, *last; | ^~~~ blxparser.c:642:17: warning: ‘msp’ may be used uninitialized in this function [-Wmaybe-uninitialized] 642 | if (msp) getDesc(msp, line, sname); | ^~~~~~~~~~~~~~~~~~~~~~~~~ blxparser.c: In function ‘pickMatch’: blxparser.c:1013:20: warning: ‘cs’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1013 | t=ts; c=cs+1; | ~^~~~~ blxparser.c:1014:8: warning: ‘ts’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1014 | if(ts == tp) s = 0 ; | ^ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o translate.o translate.c In file included from translate.c:34: ../wh/iupac.h:34:22: warning: missing braces around initializer [-Wmissing-braces] 34 | int PAM120[23][23] = { | ^ 35 | /*A R N D C Q E G H I L K M F P S T W Y V B Z X */ 36 | 3, -3, -1, 0, -3, -1, 0, 1, -3, -1, -3, -2, -2, -4, 1, 1, 1, -7, -4, 0, 1, 0, -1, | { } 37 | -3, 6, -1, -3, -4, 1, -3, -4, 1, -2, -4, 2, -1, -5, -1, -1, -2, 1, -5, -3, -1, 0, -1, | { } 38 | -1, -1, 4, 2, -5, 0, 1, 0, 2, -2, -4, 1, -3, -4, -2, 1, 0, -4, -2, -3, 4, 1, -1, | { } 39 | 0, -3, 2, 5, -7, 1, 3, 0, 0, -3, -5, -1, -4, -7, -3, 0, -1, -8, -5, -3, 5, 3, -1, | { } 40 | -3, -4, -5, -7, 9, -7, -7, -4, -4, -3, -7, -7, -6, -6, -4, 0, -3, -8, -1, -3, -4, -6, -1, | { } 41 | -1, 1, 0, 1, -7, 6, 2, -3, 3, -3, -2, 0, -1, -6, 0, -2, -2, -6, -5, -3, 1, 5, -1, | { } 42 | 0, -3, 1, 3, -7, 2, 5, -1, -1, -3, -4, -1, -3, -7, -2, -1, -2, -8, -5, -3, 3, 5, -1, | { } 43 | 1, -4, 0, 0, -4, -3, -1, 5, -4, -4, -5, -3, -4, -5, -2, 1, -1, -8, -6, -2, 1, -1, -1, | { } 44 | -3, 1, 2, 0, -4, 3, -1, -4, 7, -4, -3, -2, -4, -3, -1, -2, -3, -3, -1, -3, 2, 2, -1, | { } 45 | -1, -2, -2, -3, -3, -3, -3, -4, -4, 6, 1, -3, 1, 0, -3, -2, 0, -6, -2, 3, -2, -2, -1, | { } 46 | -3, -4, -4, -5, -7, -2, -4, -5, -3, 1, 5, -4, 3, 0, -3, -4, -3, -3, -2, 1, -3, -2, -1, | { } 47 | -2, 2, 1, -1, -7, 0, -1, -3, -2, -3, -4, 5, 0, -7, -2, -1, -1, -5, -5, -4, 1, 0, -1, | { } 48 | -2, -1, -3, -4, -6, -1, -3, -4, -4, 1, 3, 0, 8, -1, -3, -2, -1, -6, -4, 1, -3, -1, -1, | { } 49 | -4, -5, -4, -7, -6, -6, -7, -5, -3, 0, 0, -7, -1, 8, -5, -3, -4, -1, 4, -3, -4, -5, -1, | { } 50 | 1, -1, -2, -3, -4, 0, -2, -2, -1, -3, -3, -2, -3, -5, 6, 1, -1, -7, -6, -2, -1, 0, -1, | { } 51 | 1, -1, 1, 0, 0, -2, -1, 1, -2, -2, -4, -1, -2, -3, 1, 3, 2, -2, -3, -2, 1, 0, -1, | { } 52 | 1, -2, 0, -1, -3, -2, -2, -1, -3, 0, -3, -1, -1, -4, -1, 2, 4, -6, -3, 0, 1, -1, -1, | { } 53 | -7, 1, -4, -8, -8, -6, -8, -8, -3, -6, -3, -5, -6, -1, -7, -2, -6, 12, -2, -8, -5, -6, -1, | { } 54 | -4, -5, -2, -5, -1, -5, -5, -6, -1, -2, -2, -5, -4, 4, -6, -3, -3, -2, 8, -3, -2, -4, -1, | { } 55 | 0, -3, -3, -3, -3, -3, -3, -2, -3, 3, 1, -4, 1, -3, -2, -2, 0, -8, -3, 5, -2, -2, -1, | { } 56 | 1, -1, 4, 5, -4, 1, 3, 1, 2, -2, -3, 1, -3, -4, -1, 1, 1, -5, -2, -2, 6, 4, -1, | { } 57 | 0, 0, 1, 3, -6, 5, 5, -1, 2, -2, -2, 0, -1, -5, 0, 0, -1, -6, -4, -2, 4, 6, -1, | { } 58 | -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1 | { 59 | }; | } ../wh/iupac.h:126:28: warning: missing braces around initializer [-Wmissing-braces] 126 | struct iupactype iupac[] = { | ^ ...... 129 | 'A', 'T', NTA, NTT, | { } 130 | 'C', 'G', NTC, NTG, | { } 131 | 'G', 'C', NTG, NTC, | { } 132 | 'T', 'A', NTT, NTA, | { } 133 | 'U', 'A', NTU, NTA, | { } 134 | 'N', 'N', NTN, NTN, | { } 135 | ' ', ' ', NTGAP, NTGAP, | { } 136 | 'R', 'Y', NTR, NTY, | { } 137 | 'Y', 'R', NTY, NTR, | { } 138 | 'M', 'K', NTM, NTK, | { } 139 | 'K', 'M', NTK, NTM, | { } 140 | 'S', 'S', NTS, NTS, | { } 141 | 'W', 'W', NTW, NTW, | { } 142 | 'H', 'D', NTH, NTD, | { } 143 | 'B', 'V', NTB, NTV, | { } 144 | 'V', 'B', NTV, NTB, | { } 145 | 'D', 'H', NTD, NTH | { 146 | }; | } gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -g -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o dotter.o dotter.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from ../wh/gex.h:36, from dotter.c:144: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from dotter.c:144: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from ../wh/gex.h:36, from dotter.c:144: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from dotter.c:144: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ dotter.c: In function ‘savePlot’: dotter.c:574:2: warning: variable ‘batch’ set but not used [-Wunused-but-set-variable] 574 | batch=1, | ^~~~~ dotter.c: In function ‘drawBlastHSPs’: dotter.c:1648:2: warning: variable ‘strand’ set but not used [-Wunused-but-set-variable] 1648 | strand, *MSPsname; | ^~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o dotterKarlin.o dotterKarlin.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from ../wh/gex.h:36, from dotterKarlin.c:37: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from dotterKarlin.c:37: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from ../wh/gex.h:36, from dotterKarlin.c:37: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from dotterKarlin.c:37: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ dotterKarlin.c: In function ‘winsizeFromlambdak’: dotterKarlin.c:378:14: warning: array subscript has type ‘char’ [-Wchar-subscripts] 378 | if (tob[qseq[i]] < abetsize ) | ~~~~^~~ dotterKarlin.c:380:17: warning: array subscript has type ‘char’ [-Wchar-subscripts] 380 | n1[tob[qseq[i]]]++; | ~~~~^~~ dotterKarlin.c:387:14: warning: array subscript has type ‘char’ [-Wchar-subscripts] 387 | if (tob[sseq[i]] != NA ) { | ~~~~^~~ dotterKarlin.c:388:17: warning: array subscript has type ‘char’ [-Wchar-subscripts] 388 | n2[tob[sseq[i]]]++; | ~~~~^~~ gcc -g -Wl,-z,relro -Wl,-z,now -o blixem blixem.o blxmain.o blxparser.o dotter.o dotterKarlin.o \ translate.o -L. -lgex -lgraph -lgd -lfree `../w3rdparty/acedb-config glib-2.0 gtk+-2.0` -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: ./libgraph.a(graphascii.o): in function `graphASCII': ./bin.LINUX_4/graphascii.c:264: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: ./libgraph.a(graphprint.o): in function `pdInit': ./bin.LINUX_4/graphprint.c:1164: warning: the `getwd' function is dangerous and should not be used. make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making blixelect for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o blxselect.o blxselect.c In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, from /usr/include/gtk-2.0/gtk/gtkbin.h:35, from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from ../wh/gex.h:36, from blxselect.c:37: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: ‘GTypeDebugFlags’ is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from blxselect.c:37: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from ../wh/gex.h:36, from blxselect.c:37: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: ‘GTimeVal’ is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, from /usr/include/glib-2.0/gio/gio.h:26, from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, from /usr/include/gtk-2.0/gdk/gdk.h:32, from ../wh/gex.h:35, from blxselect.c:37: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ blxselect.c: In function ‘callBlixem’: blxselect.c:107:13: warning: type of ‘box’ defaults to ‘int’ [-Wimplicit-int] 107 | static void callBlixem(box) | ^~~~~~~~~~ blxselect.c:124:5: warning: ‘strncpy’ forming offset [256, 9999] is out of the bounds [0, 256] of object ‘qname’ with type ‘char[256]’ [-Warray-bounds] 124 | strncpy(qname, name, MAXLINE); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ blxselect.c:46:15: note: ‘qname’ declared here 46 | static char qname[FULLNAMESIZE+1], | ^~~~~ gcc -g -Wl,-z,relro -Wl,-z,now -o blixelect blxselect.o blxparser.o blixem.o dotter.o dotterKarlin.o \ translate.o -L. -lgex -lgraph -lgd -lfree `../w3rdparty/acedb-config glib-2.0 gtk+-2.0` -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: ./libgraph.a(graphascii.o): in function `graphASCII': ./bin.LINUX_4/graphascii.c:264: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: ./libgraph.a(graphprint.o): in function `pdInit': ./bin.LINUX_4/graphprint.c:1164: warning: the `getwd' function is dangerous and should not be used. make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making jade2ace for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' rpcgen -b -I -K -1 rpcace.x gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -c aceclientlib.c aceclientlib.c: In function ‘wakeUp’: aceclientlib.c:59:14: warning: variable ‘sig’ set but not used [-Wunused-but-set-variable] 59 | static int sig = 0 ; | ^~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o rpcace_clnt.o rpcace_clnt.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o rpcace_xdr.o rpcace_xdr.c rpcace_xdr.c: In function ‘xdr_ace_reponse’: rpcace_xdr.c:94:20: warning: unused variable ‘buf’ [-Wunused-variable] 94 | register int32_t *buf; | ^~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c jade2ace.c jade2ace.c: In function ‘doQuery’: jade2ace.c:317:21: warning: ‘ is the superclass for ’ directive writing 23 bytes into a region of size between 1 and 512 [-Wformat-overflow=] 317 | sprintf(message,"%s is the superclass for %s",superclass,subclass); | ^~~~~~~~~~~~~~~~~~~~~~~ jade2ace.c:317:2: note: ‘sprintf’ output between 24 and 1046 bytes into a destination of size 512 317 | sprintf(message,"%s is the superclass for %s",superclass,subclass); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -Wl,-z,relro -Wl,-z,now -o jade2ace jade2ace.o aceclientlib.o rpcace_clnt.o rpcace_xdr.o -L. -lfree -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 /usr/bin/ld: jade2ace.o: in function `doTable': ./bin.LINUX_4/jade2ace.c:372: warning: the use of `tempnam' is dangerous, better use `mkstemp' chmod 755 jade2ace \rm -f netclient ln -s jade2ace netclient make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' making efetch for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -DMIXDB efetch.c efetch.c: In function ‘swissprot’: efetch.c:47:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 47 | if (env = getenv("SWDIR")) strcpy(dbdir, env); | ^~~ efetch.c:47:32: warning: implicit declaration of function ‘strcpy’ [-Wimplicit-function-declaration] 47 | if (env = getenv("SWDIR")) strcpy(dbdir, env); | ^~~~~~ efetch.c:47:32: warning: incompatible implicit declaration of built-in function ‘strcpy’ efetch.c:39:1: note: include ‘’ or provide a declaration of ‘strcpy’ 38 | #include "dbidx.h" +++ |+#include 39 | efetch.c:48:10: warning: incompatible implicit declaration of built-in function ‘strcpy’ 48 | else strcpy(dbdir, DEFAULT_SWDIR); | ^~~~~~ efetch.c:48:10: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:49:5: warning: incompatible implicit declaration of built-in function ‘strcpy’ 49 | strcpy(dbsource, "S"); | ^~~~~~ efetch.c:49:5: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c: In function ‘pir’: efetch.c:53:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 53 | if (env = getenv("PIRDIR")) strcpy(dbdir, env); | ^~~ efetch.c:53:33: warning: incompatible implicit declaration of built-in function ‘strcpy’ 53 | if (env = getenv("PIRDIR")) strcpy(dbdir, env); | ^~~~~~ efetch.c:53:33: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:54:10: warning: incompatible implicit declaration of built-in function ‘strcpy’ 54 | else strcpy(dbdir, DEFAULT_PIRDIR); | ^~~~~~ efetch.c:54:10: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:55:5: warning: incompatible implicit declaration of built-in function ‘strcpy’ 55 | strcpy(dbsource, "P"); | ^~~~~~ efetch.c:55:5: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c: In function ‘wormpep’: efetch.c:59:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 59 | if (env = getenv("WORMDIR")) strcpy(dbdir, env); | ^~~ efetch.c:59:34: warning: incompatible implicit declaration of built-in function ‘strcpy’ 59 | if (env = getenv("WORMDIR")) strcpy(dbdir, env); | ^~~~~~ efetch.c:59:34: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:60:10: warning: incompatible implicit declaration of built-in function ‘strcpy’ 60 | else strcpy(dbdir, DEFAULT_WORMDIR); | ^~~~~~ efetch.c:60:10: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:61:5: warning: incompatible implicit declaration of built-in function ‘strcpy’ 61 | strcpy(dbsource, "W"); | ^~~~~~ efetch.c:61:5: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c: In function ‘embl’: efetch.c:66:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 66 | if (env = getenv("EMBLDIR")) strcpy(dbdir, env); | ^~~ efetch.c:66:34: warning: incompatible implicit declaration of built-in function ‘strcpy’ 66 | if (env = getenv("EMBLDIR")) strcpy(dbdir, env); | ^~~~~~ efetch.c:66:34: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:67:10: warning: incompatible implicit declaration of built-in function ‘strcpy’ 67 | else strcpy(dbdir, DEFAULT_EMBLDIR); | ^~~~~~ efetch.c:67:10: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:68:5: warning: incompatible implicit declaration of built-in function ‘strcpy’ 68 | strcpy(dbsource, "E"); | ^~~~~~ efetch.c:68:5: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c: In function ‘genbank’: efetch.c:72:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 72 | if (env = getenv("GBDIR")) strcpy(dbdir, env); | ^~~ efetch.c:72:32: warning: incompatible implicit declaration of built-in function ‘strcpy’ 72 | if (env = getenv("GBDIR")) strcpy(dbdir, env); | ^~~~~~ efetch.c:72:32: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:73:10: warning: incompatible implicit declaration of built-in function ‘strcpy’ 73 | else strcpy(dbdir, DEFAULT_GBDIR); | ^~~~~~ efetch.c:73:10: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:74:5: warning: incompatible implicit declaration of built-in function ‘strcpy’ 74 | strcpy(dbsource, "G"); | ^~~~~~ efetch.c:74:5: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c: In function ‘prodom’: efetch.c:78:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 78 | if (env = getenv("PRODOMDIR")) strcpy(dbdir, env); | ^~~ efetch.c:78:36: warning: incompatible implicit declaration of built-in function ‘strcpy’ 78 | if (env = getenv("PRODOMDIR")) strcpy(dbdir, env); | ^~~~~~ efetch.c:78:36: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:79:10: warning: incompatible implicit declaration of built-in function ‘strcpy’ 79 | else strcpy(dbdir, DEFAULT_PRODOMDIR); | ^~~~~~ efetch.c:79:10: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:80:5: warning: incompatible implicit declaration of built-in function ‘strcpy’ 80 | strcpy(dbsource, "D"); | ^~~~~~ efetch.c:80:5: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c: In function ‘prosite’: efetch.c:84:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 84 | if (env = getenv("PROSITEDIR")) strcpy(dbdir, env); | ^~~ efetch.c:84:37: warning: incompatible implicit declaration of built-in function ‘strcpy’ 84 | if (env = getenv("PROSITEDIR")) strcpy(dbdir, env); | ^~~~~~ efetch.c:84:37: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:85:10: warning: incompatible implicit declaration of built-in function ‘strcpy’ 85 | else strcpy(dbdir, DEFAULT_PROSITEDIR); | ^~~~~~ efetch.c:85:10: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:86:5: warning: incompatible implicit declaration of built-in function ‘strcpy’ 86 | strcpy(dbsource, "R"); | ^~~~~~ efetch.c:86:5: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c: At top level: efetch.c:90:6: warning: return type of ‘main’ is not ‘int’ [-Wmain] 90 | void main(int argc, char *argv[]) | ^~~~ efetch.c: In function ‘main’: efetch.c:192:11: warning: implicit declaration of function ‘strncmp’ [-Wimplicit-function-declaration] 192 | if (0 == strncmp("--help",argv[i],6) || 0 == strncmp("-help",argv[i],5)) { | ^~~~~~~ efetch.c:192:36: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 192 | if (0 == strncmp("--help",argv[i],6) || 0 == strncmp("-help",argv[i],5)) { | ^ : note: built-in ‘strncmp’ declared here efetch.c:192:71: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 192 | if (0 == strncmp("--help",argv[i],6) || 0 == strncmp("-help",argv[i],5)) { | ^ : note: built-in ‘strncmp’ declared here efetch.c:193:23: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration] 193 | if (!(help = malloc(strlen(helpText) + 102))) { | ^~~~~~ efetch.c:193:23: warning: incompatible implicit declaration of built-in function ‘strlen’ efetch.c:193:23: note: include ‘’ or provide a declaration of ‘strlen’ efetch.c:197:3: warning: incompatible implicit declaration of built-in function ‘strcpy’ 197 | strcpy(help, helpText); | ^~~~~~ efetch.c:197:3: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:198:3: warning: implicit declaration of function ‘strncat’ [-Wimplicit-function-declaration] 198 | strncat(help, cc_date, 100); | ^~~~~~~ efetch.c:198:3: warning: incompatible implicit declaration of built-in function ‘strncat’ efetch.c:198:3: note: include ‘’ or provide a declaration of ‘strncat’ efetch.c:199:3: warning: implicit declaration of function ‘strcat’ [-Wimplicit-function-declaration] 199 | strcat(help, "\n"); | ^~~~~~ efetch.c:199:3: warning: incompatible implicit declaration of built-in function ‘strcat’ efetch.c:199:3: note: include ‘’ or provide a declaration of ‘strcat’ efetch.c:206:18: warning: implicit declaration of function ‘getopt’; did you mean ‘getsubopt’? [-Wimplicit-function-declaration] 206 | while ((optc = getopt(argc, argv, optstring)) != -1) | ^~~~~~ | getsubopt efetch.c:210:7: warning: incompatible implicit declaration of built-in function ‘strcpy’ 210 | strcpy(dbsource, optarg); break; | ^~~~~~ efetch.c:210:7: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:225:7: warning: implicit declaration of function ‘strncpy’ [-Wimplicit-function-declaration] 225 | strncpy(idxfile, optarg, MAXFILE); break; | ^~~~~~~ efetch.c:225:7: warning: incompatible implicit declaration of built-in function ‘strncpy’ efetch.c:225:7: note: include ‘’ or provide a declaration of ‘strncpy’ efetch.c:247:27: warning: incompatible implicit declaration of built-in function ‘strlen’ 247 | if (!(help = malloc(strlen(helpText) + 102))) { | ^~~~~~ efetch.c:247:27: note: include ‘’ or provide a declaration of ‘strlen’ efetch.c:252:7: warning: incompatible implicit declaration of built-in function ‘strncat’ 252 | strncat(help, cc_date, 100); | ^~~~~~~ efetch.c:252:7: note: include ‘’ or provide a declaration of ‘strncat’ efetch.c:253:7: warning: incompatible implicit declaration of built-in function ‘strcat’ 253 | strcat(help, "\n"); | ^~~~~~ efetch.c:253:7: note: include ‘’ or provide a declaration of ‘strcat’ efetch.c:295:28: warning: incompatible implicit declaration of built-in function ‘strlen’ 295 | if (!(usage = malloc(strlen(usageText) + 102))) { | ^~~~~~ efetch.c:295:28: note: include ‘’ or provide a declaration of ‘strlen’ efetch.c:310:8: warning: incompatible implicit declaration of built-in function ‘strcpy’ 310 | else strcpy(query, argv[argc - 1]); | ^~~~~~ efetch.c:310:8: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:312:15: warning: incompatible implicit declaration of built-in function ‘strlen’ 312 | for (i=0; i’ or provide a declaration of ‘strlen’ efetch.c:312:46: warning: implicit declaration of function ‘toupper’ [-Wimplicit-function-declaration] 312 | for (i=0; i’ or provide a declaration of ‘strchr’ efetch.c:313:7: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 313 | if (tmpstr = (char *)strchr(query, '$')) *tmpstr = '_'; | ^~~~~~ efetch.c:314:24: warning: incompatible implicit declaration of built-in function ‘strchr’ 314 | if (tmpstr = (char *)strchr(query, '*')) { | ^~~~~~ efetch.c:314:24: note: include ‘’ or provide a declaration of ‘strchr’ efetch.c:314:7: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 314 | if (tmpstr = (char *)strchr(query, '*')) { | ^~~~~~ efetch.c:319:15: warning: incompatible implicit declaration of built-in function ‘strlen’ 319 | for (i=0; i’ or provide a declaration of ‘strlen’ efetch.c:339:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 339 | if (env = getenv("DBDIR")) strcpy(dbdir, env); | ^~~ efetch.c:339:34: warning: incompatible implicit declaration of built-in function ‘strcpy’ 339 | if (env = getenv("DBDIR")) strcpy(dbdir, env); | ^~~~~~ efetch.c:339:34: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:342:29: warning: incompatible implicit declaration of built-in function ‘strchr’ 342 | else if (tmpstr = (char *)strchr(query, ':')) | ^~~~~~ efetch.c:342:29: note: include ‘’ or provide a declaration of ‘strchr’ efetch.c:342:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 342 | else if (tmpstr = (char *)strchr(query, ':')) | ^~~~~~ efetch.c:344:7: warning: incompatible implicit declaration of built-in function ‘strcpy’ 344 | strcpy(dbprefix, query); | ^~~~~~ efetch.c:344:7: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:347:33: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 347 | if (!strncmp(query, "SP", 2)) swissprot(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:348:38: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 348 | else if (!strncmp(query, "SW", 2)) swissprot(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:349:39: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 349 | else if (!strncmp(query, "PIR", 3)) pir(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:350:38: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 350 | else if (!strncmp(query, "WP", 2)) wormpep(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:351:38: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 351 | else if (!strncmp(query, "WO", 2)) wormpep(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:352:38: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 352 | else if (!strncmp(query, "EM", 2)) embl(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:353:38: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 353 | else if (!strncmp(query, "GB", 2)) genbank(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:354:38: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 354 | else if (!strncmp(query, "GE", 2)) genbank(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:355:40: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 355 | else if (!strncmp(query, "PROD", 4)) prodom(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:356:38: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 356 | else if (!strncmp(query, "PD", 2)) prodom(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:357:40: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 357 | else if (!strncmp(query, "PROS", 4)) prosite(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:358:38: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 358 | else if (!strncmp(query, "PS", 2)) prosite(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:365:7: warning: implicit declaration of function ‘strcmp’ [-Wimplicit-function-declaration] 365 | if (strcmp(dbsource, "")) | ^~~~~~ efetch.c:367:35: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 367 | if (!strncmp(dbsource, "S", 1)) swissprot(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:368:40: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 368 | else if (!strncmp(dbsource, "P", 1)) pir(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:369:40: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 369 | else if (!strncmp(dbsource, "W", 1)) wormpep(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:370:40: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 370 | else if (!strncmp(dbsource, "E", 1)) embl(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:371:40: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 371 | else if (!strncmp(dbsource, "G", 1)) genbank(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:372:40: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 372 | else if (!strncmp(dbsource, "D", 1)) prodom(); | ^ : note: built-in ‘strncmp’ declared here efetch.c:381:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 381 | if (env = getenv("DBDIR")) { | ^~~ efetch.c:382:4: warning: incompatible implicit declaration of built-in function ‘strcpy’ 382 | strcpy(dbdir, env); | ^~~~~~ efetch.c:382:4: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:388:38: warning: incompatible implicit declaration of built-in function ‘strlen’ 388 | else if (strchr(query, '_') || strlen(query) < 5 ) swissprot(); | ^~~~~~ efetch.c:388:38: note: include ‘’ or provide a declaration of ‘strlen’ efetch.c:406:14: warning: incompatible implicit declaration of built-in function ‘strcpy’ 406 | if (env) strcpy(idxfile, env); | ^~~~~~ efetch.c:406:14: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:419:22: warning: incompatible implicit declaration of built-in function ‘strcpy’ 419 | if (env != NULL) strcpy(divfile, env); | ^~~~~~ efetch.c:419:22: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:533:22: warning: incompatible implicit declaration of built-in function ‘strcpy’ 533 | if (env != NULL) strcpy(dbfile, env); | ^~~~~~ efetch.c:533:22: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:567:34: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 567 | if(!strncmp(dbsource, "P", 1)) | ^ : note: built-in ‘strncmp’ declared here efetch.c:578:59: warning: implicit declaration of function ‘strstr’ [-Wimplicit-function-declaration] 578 | if (wormpep2swiss && *dbsource == 'W' && (cp = (char *)strstr(tmpstr, "SW:"))) { | ^~~~~~ efetch.c:578:59: warning: incompatible implicit declaration of built-in function ‘strstr’ efetch.c:578:59: note: include ‘’ or provide a declaration of ‘strstr’ efetch.c:579:29: warning: incompatible implicit declaration of built-in function ‘strchr’ 579 | if (tmpstr = (char *)strchr(cp, ' ')) *tmpstr = 0; | ^~~~~~ efetch.c:579:29: note: include ‘’ or provide a declaration of ‘strchr’ efetch.c:579:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 579 | if (tmpstr = (char *)strchr(cp, ' ')) *tmpstr = 0; | ^~~~~~ efetch.c:580:8: warning: incompatible implicit declaration of built-in function ‘strcpy’ 580 | strcpy(fetchstr, "efetch -a "); | ^~~~~~ efetch.c:580:8: note: include ‘’ or provide a declaration of ‘strcpy’ efetch.c:581:8: warning: incompatible implicit declaration of built-in function ‘strcat’ 581 | strcat(fetchstr, cp); | ^~~~~~ efetch.c:581:8: note: include ‘’ or provide a declaration of ‘strcat’ efetch.c:586:39: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 586 | else if(!strncmp(dbsource, "G", 1)) | ^ : note: built-in ‘strncmp’ declared here efetch.c:407:32: warning: ‘%s’ directive writing 12 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 407 | else sprintf(idxfile, "%s%s", dbdir, DEFAULT_IDXFILE); | ^~ efetch.c:407:12: note: ‘sprintf’ output between 13 and 140 bytes into a destination of size 128 407 | else sprintf(idxfile, "%s%s", dbdir, DEFAULT_IDXFILE); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ efetch.c:420:32: warning: ‘%s’ directive writing 12 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 420 | else sprintf(divfile, "%s%s", dbdir, DEFAULT_DIVFILE); | ^~ efetch.c:420:12: note: ‘sprintf’ output between 13 and 140 bytes into a destination of size 128 420 | else sprintf(divfile, "%s%s", dbdir, DEFAULT_DIVFILE); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ efetch.c:436:27: warning: ‘%s’ directive writing 9 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 436 | sprintf(actrgfile, "%s%s", dbdir, DEFAULT_ACTRGFILE); | ^~ efetch.c:436:5: note: ‘sprintf’ output between 10 and 137 bytes into a destination of size 128 436 | sprintf(actrgfile, "%s%s", dbdir, DEFAULT_ACTRGFILE); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ efetch.c:450:27: warning: ‘%s’ directive writing 9 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 450 | sprintf(achitfile, "%s%s", dbdir, DEFAULT_ACHITFILE); | ^~ efetch.c:450:5: note: ‘sprintf’ output between 10 and 137 bytes into a destination of size 128 450 | sprintf(achitfile, "%s%s", dbdir, DEFAULT_ACHITFILE); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ efetch.c:540:28: warning: ‘%s’ directive writing 7 bytes into a region of size between 1 and 128 [-Wformat-overflow=] 540 | sprintf(dbfile, "%s%s", dbdir, DEFAULT_DBFILE); | ^~ efetch.c:540:9: note: ‘sprintf’ output between 8 and 135 bytes into a destination of size 128 540 | sprintf(dbfile, "%s%s", dbdir, DEFAULT_DBFILE); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ efetch.c:288:7: warning: ‘strncpy’ specified bound 128 equals destination size [-Wstringop-truncation] 288 | strncpy(customName, optarg, MAXFILE); break; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ efetch.c:264:7: warning: ‘strncpy’ specified bound 128 equals destination size [-Wstringop-truncation] 264 | strncpy(divfile, optarg, MAXFILE); break; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ efetch.c:225:7: warning: ‘strncpy’ specified bound 128 equals destination size [-Wstringop-truncation] 225 | strncpy(idxfile, optarg, MAXFILE); break; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ efetch.c:242:7: warning: ‘strncpy’ specified bound 128 equals destination size [-Wstringop-truncation] 242 | strncpy(dbfile, optarg, MAXFILE); break; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ efetch.c:235:7: warning: ‘strncpy’ specified bound 128 equals destination size [-Wstringop-truncation] 235 | strncpy(dbdir, optarg, MAXFILE); break; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ efetch.c:308:5: warning: ‘usage’ may be used uninitialized in this function [-Wmaybe-uninitialized] 308 | fprintf(stderr, "%s\n", usage); exit(1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o dbidx.o dbidx.c dbidx.c: In function ‘isseq’: dbidx.c:109:13: warning: implicit declaration of function ‘isalpha’ [-Wimplicit-function-declaration] 109 | return (isalpha(c) || (c == '*')); | ^~~~~~~ dbidx.c: In function ‘printheader’: dbidx.c:150:36: warning: format ‘%u’ expects argument of type ‘unsigned int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 150 | printf("Size of index file = %u\n", head->file_size); | ~^ ~~~~~~~~~~~~~~~ | | | | | long unsigned int | unsigned int | %lu dbidx.c:151:36: warning: format ‘%u’ expects argument of type ‘unsigned int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 151 | printf("Number of records = %u\n", head->nrecords); | ~^ ~~~~~~~~~~~~~~ | | | | | long unsigned int | unsigned int | %lu dbidx.c: In function ‘printActrg’: dbidx.c:162:41: warning: format ‘%u’ expects argument of type ‘unsigned int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 162 | printf("Number of hits = %u\n", rec->nhits); | ~^ ~~~~~~~~~~ | | | | | long unsigned int | unsigned int | %lu dbidx.c:163:41: warning: format ‘%u’ expects argument of type ‘unsigned int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 163 | printf("Record number of first hit = %u\n", rec->hit_rec_num); | ~^ ~~~~~~~~~~~~~~~~ | | | | | long unsigned int | unsigned int | %lu dbidx.c: In function ‘readEntrynam’: dbidx.c:198:7: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 198 | if( space = (char *)strchr(rec.entry_name, ' ') ) *space = '\0'; | ^~~~~ dbidx.c: In function ‘printEntrynam’: dbidx.c:238:32: warning: format ‘%u’ expects argument of type ‘unsigned int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 238 | printf("Annotation offset = %u\n", rec->ann_offset); | ~^ ~~~~~~~~~~~~~~~ | | | | | long unsigned int | unsigned int | %lu dbidx.c:239:32: warning: format ‘%u’ expects argument of type ‘unsigned int’, but argument 2 has type ‘long unsigned int’ [-Wformat=] 239 | printf("Sequence offset = %u\n", rec->seq_offset); | ~^ ~~~~~~~~~~~~~~~ | | | | | long unsigned int | unsigned int | %lu dbidx.c: In function ‘printPIRseq’: dbidx.c:330:7: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 330 | if( slash = (char *)strchr(ACnr, '\\') ) *slash = '\0'; | ^~~~~ dbidx.c:353:22: warning: implicit declaration of function ‘toupper’ [-Wimplicit-function-declaration] 353 | TITLEline[i] = toupper(TITLEline[i]); | ^~~~~~~ dbidx.c: In function ‘printGBseq’: dbidx.c:398:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 398 | if( slash = (char *)strchr(ACnr, '\\') ) *slash = '\0'; | ^~~~~ dbidx.c: In function ‘printEMBLseq’: dbidx.c:448:15: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 448 | if( slash = (char *)strchr(buff, ';') ) *slash = '\0'; | ^~~~~ dbidx.c: In function ‘getname’: dbidx.c:586:7: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 586 | if (space = (char *)strchr(name, ' ')) *space = 0; | ^~~~~ dbidx.c: In function ‘getdbfile’: dbidx.c:627:38: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration] 627 | for (i=0; inums = (int *)messalloc(sequence->length * sizeof(int)); | ^~~~~~~~~ gfcode.c:67:22: warning: incompatible implicit declaration of built-in function ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:188:29: note: in expansion of macro ‘messalloc’ 188 | sequence->nums = (int *)messalloc(sequence->length * sizeof(int)); | ^~~~~~~~~ gfcode.c:76:1: note: include ‘’ or provide a declaration of ‘malloc’ 75 | #include "readseq.h" +++ |+#include 76 | gfcode.c: In function ‘countsToFreqs’: gfcode.c:210:8: warning: implicit declaration of function ‘strcmp’ [-Wimplicit-function-declaration] 210 | if (!strcmp(table->classDef,"defined")) | ^~~~~~ gfcode.c: In function ‘readTableFile’: gfcode.c:486:7: warning: implicit declaration of function ‘strcpy’ [-Wimplicit-function-declaration] 486 | strcpy(string,string2); | ^~~~~~ gfcode.c:486:7: warning: incompatible implicit declaration of built-in function ‘strcpy’ gfcode.c:76:1: note: include ‘’ or provide a declaration of ‘strcpy’ 75 | #include "readseq.h" +++ |+#include 76 | gfcode.c:499:7: warning: implicit declaration of function ‘exit’ [-Wimplicit-function-declaration] 499 | exit(1); | ^~~~ gfcode.c:499:7: warning: incompatible implicit declaration of built-in function ‘exit’ gfcode.c:499:7: note: include ‘’ or provide a declaration of ‘exit’ gfcode.c:516:4: warning: incompatible implicit declaration of built-in function ‘exit’ 516 | exit(1); | ^~~~ gfcode.c:516:4: note: include ‘’ or provide a declaration of ‘exit’ gfcode.c: In function ‘initTable’: gfcode.c:67:22: warning: incompatible implicit declaration of built-in function ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:538:22: note: in expansion of macro ‘messalloc’ 538 | table = (GfTable *)messalloc(sizeof(GfTable)); | ^~~~~~~~~ gfcode.c:67:22: note: include ‘’ or provide a declaration of ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:538:22: note: in expansion of macro ‘messalloc’ 538 | table = (GfTable *)messalloc(sizeof(GfTable)); | ^~~~~~~~~ gfcode.c:541:3: warning: incompatible implicit declaration of built-in function ‘strcpy’ 541 | strcpy(table->refSeqs,"all"); /*default reference sequences*/ | ^~~~~~ gfcode.c:541:3: note: include ‘’ or provide a declaration of ‘strcpy’ gfcode.c: In function ‘expandTable’: gfcode.c:67:22: warning: incompatible implicit declaration of built-in function ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:570:29: note: in expansion of macro ‘messalloc’ 570 | table->numTuples = (int *)messalloc(table->numCols * sizeof(int)); | ^~~~~~~~~ gfcode.c:67:22: note: include ‘’ or provide a declaration of ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:570:29: note: in expansion of macro ‘messalloc’ 570 | table->numTuples = (int *)messalloc(table->numCols * sizeof(int)); | ^~~~~~~~~ gfcode.c: In function ‘allocIntMat’: gfcode.c:67:22: warning: incompatible implicit declaration of built-in function ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:578:20: note: in expansion of macro ‘messalloc’ 578 | mtable = (int **)messalloc(table->numRows * sizeof(int *)); | ^~~~~~~~~ gfcode.c:67:22: note: include ‘’ or provide a declaration of ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:578:20: note: in expansion of macro ‘messalloc’ 578 | mtable = (int **)messalloc(table->numRows * sizeof(int *)); | ^~~~~~~~~ gfcode.c: In function ‘allocFloatMat’: gfcode.c:67:22: warning: incompatible implicit declaration of built-in function ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:591:22: note: in expansion of macro ‘messalloc’ 591 | stable = (float **)messalloc(table->numRows * sizeof(float *)); | ^~~~~~~~~ gfcode.c:67:22: note: include ‘’ or provide a declaration of ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:591:22: note: in expansion of macro ‘messalloc’ 591 | stable = (float **)messalloc(table->numRows * sizeof(float *)); | ^~~~~~~~~ gfcode.c: In function ‘makeConvTable’: gfcode.c:67:22: warning: incompatible implicit declaration of built-in function ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:605:22: note: in expansion of macro ‘messalloc’ 605 | convTable = (int *)messalloc(256 * sizeof(int)); | ^~~~~~~~~ gfcode.c:67:22: note: include ‘’ or provide a declaration of ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:605:22: note: in expansion of macro ‘messalloc’ 605 | convTable = (int *)messalloc(256 * sizeof(int)); | ^~~~~~~~~ gfcode.c: In function ‘aceFeatures’: gfcode.c:67:22: warning: incompatible implicit declaration of built-in function ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:659:25: note: in expansion of macro ‘messalloc’ 659 | diffVec = (double *)messalloc((length+3) * sizeof(double)); | ^~~~~~~~~ gfcode.c:67:22: note: include ‘’ or provide a declaration of ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:659:25: note: in expansion of macro ‘messalloc’ 659 | diffVec = (double *)messalloc((length+3) * sizeof(double)); | ^~~~~~~~~ gfcode.c:664:11: warning: implicit declaration of function ‘strncmp’ [-Wimplicit-function-declaration] 664 | (( ! strncmp( sequence->letters + i, "TAA", 3) | ^~~~~~~ gfcode.c:664:50: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 664 | (( ! strncmp( sequence->letters + i, "TAA", 3) | ^ : note: built-in ‘strncmp’ declared here gfcode.c:665:53: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 665 | || ! strncmp( sequence->letters + i, "TAG", 3) | ^ : note: built-in ‘strncmp’ declared here gfcode.c:666:53: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 666 | || ! strncmp( sequence->letters + i, "TGA", 3) ) | ^ : note: built-in ‘strncmp’ declared here gfcode.c:68:21: warning: implicit declaration of function ‘free’ [-Wimplicit-function-declaration] 68 | #define messfree(z) free(z) | ^~~~ gfcode.c:671:5: note: in expansion of macro ‘messfree’ 671 | messfree (diffVec); | ^~~~~~~~ gfcode.c:68:21: warning: incompatible implicit declaration of built-in function ‘free’ 68 | #define messfree(z) free(z) | ^~~~ gfcode.c:671:5: note: in expansion of macro ‘messfree’ 671 | messfree (diffVec); | ^~~~~~~~ gfcode.c:68:21: note: include ‘’ or provide a declaration of ‘free’ 68 | #define messfree(z) free(z) | ^~~~ gfcode.c:671:5: note: in expansion of macro ‘messfree’ 671 | messfree (diffVec); | ^~~~~~~~ gfcode.c:643:7: warning: variable ‘nSites’ set but not used [-Wunused-but-set-variable] 643 | int nSites; | ^~~~~~ gfcode.c: In function ‘aceSites’: gfcode.c:713:50: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 713 | if ( strncmp( sequence->letters + pos, "TAA", 3) | ^ : note: built-in ‘strncmp’ declared here gfcode.c:714:53: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 714 | && strncmp( sequence->letters + pos, "TAG", 3) | ^ : note: built-in ‘strncmp’ declared here gfcode.c:715:53: warning: ‘strncmp’ argument 3 type is ‘int’ where ‘long unsigned int’ is expected in a call to built-in function declared without prototype [-Wbuiltin-declaration-mismatch] 715 | && strncmp( sequence->letters + pos, "TGA", 3) ) | ^ : note: built-in ‘strncmp’ declared here gfcode.c: In function ‘allocGap’: gfcode.c:67:22: warning: incompatible implicit declaration of built-in function ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:748:40: note: in expansion of macro ‘messalloc’ 748 | if (!(numGaps%500)) headGap = (Gap *)messalloc(500 * sizeof(Gap)); | ^~~~~~~~~ gfcode.c:67:22: note: include ‘’ or provide a declaration of ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:748:40: note: in expansion of macro ‘messalloc’ 748 | if (!(numGaps%500)) headGap = (Gap *)messalloc(500 * sizeof(Gap)); | ^~~~~~~~~ gfcode.c: In function ‘aceMaxSegs’: gfcode.c:67:22: warning: incompatible implicit declaration of built-in function ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:781:19: note: in expansion of macro ‘messalloc’ 781 | maxPos = (int *)messalloc((end+1) * sizeof(int)); | ^~~~~~~~~ gfcode.c:67:22: note: include ‘’ or provide a declaration of ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:781:19: note: in expansion of macro ‘messalloc’ 781 | maxPos = (int *)messalloc((end+1) * sizeof(int)); | ^~~~~~~~~ gfcode.c:68:21: warning: incompatible implicit declaration of built-in function ‘free’ 68 | #define messfree(z) free(z) | ^~~~ gfcode.c:821:3: note: in expansion of macro ‘messfree’ 821 | messfree (maxPos); | ^~~~~~~~ gfcode.c:68:21: note: include ‘’ or provide a declaration of ‘free’ 68 | #define messfree(z) free(z) | ^~~~ gfcode.c:821:3: note: in expansion of macro ‘messfree’ 821 | messfree (maxPos); | ^~~~~~~~ gfcode.c: In function ‘sequenceAllocate’: gfcode.c:67:22: warning: incompatible implicit declaration of built-in function ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:837:21: note: in expansion of macro ‘messalloc’ 837 | seq = (Sequence *)messalloc(sizeof(Sequence)) ; | ^~~~~~~~~ gfcode.c:67:22: note: include ‘’ or provide a declaration of ‘malloc’ 67 | #define messalloc(z) malloc(z) | ^~~~~~ gfcode.c:837:21: note: in expansion of macro ‘messalloc’ 837 | seq = (Sequence *)messalloc(sizeof(Sequence)) ; | ^~~~~~~~~ gfcode.c:842:3: warning: incompatible implicit declaration of built-in function ‘strcpy’ 842 | strcpy (seq->name, name) ; | ^~~~~~ gfcode.c:842:3: note: include ‘’ or provide a declaration of ‘strcpy’ gfcode.c: In function ‘sequenceDestroy’: gfcode.c:68:21: warning: incompatible implicit declaration of built-in function ‘free’ 68 | #define messfree(z) free(z) | ^~~~ gfcode.c:851:3: note: in expansion of macro ‘messfree’ 851 | messfree (seq->letters) ; | ^~~~~~~~ gfcode.c:68:21: note: include ‘’ or provide a declaration of ‘free’ 68 | #define messfree(z) free(z) | ^~~~ gfcode.c:851:3: note: in expansion of macro ‘messfree’ 851 | messfree (seq->letters) ; | ^~~~~~~~ gfcode.c: In function ‘createSequences’: gfcode.c:869:12: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration] 869 | length = strlen (dna) ; | ^~~~~~ gfcode.c:869:12: warning: incompatible implicit declaration of built-in function ‘strlen’ gfcode.c:869:12: note: include ‘’ or provide a declaration of ‘strlen’ gfcode.c: In function ‘geneFinderInit’: gfcode.c:1086:7: warning: incompatible implicit declaration of built-in function ‘strcpy’ 1086 | strcpy( lastFileName, fileName ); | ^~~~~~ gfcode.c:1086:7: note: include ‘’ or provide a declaration of ‘strcpy’ gfcode.c:1017:9: warning: unused variable ‘cp’ [-Wunused-variable] 1017 | char *cp, fileName[MAXSTRLEN], lastFileName[MAXSTRLEN] ; | ^~ gfcode.c: In function ‘usage’: gfcode.c:1106:3: warning: incompatible implicit declaration of built-in function ‘exit’ 1106 | exit (-1) ; | ^~~~ gfcode.c:1106:3: note: include ‘’ or provide a declaration of ‘exit’ gfcode.c: In function ‘main’: gfcode.c:1168:7: warning: incompatible implicit declaration of built-in function ‘exit’ 1168 | exit(0); | ^~~~ gfcode.c:1168:7: note: include ‘’ or provide a declaration of ‘exit’ gfcode.c:1177:25: warning: implicit declaration of function ‘atof’ [-Wimplicit-function-declaration] 1177 | { intron3Cutoff = atof (argv[1]) ; | ^~~~ gfcode.c:1214:55: warning: format ‘%s’ expects argument of type ‘char *’, but argument 3 has type ‘char **’ [-Wformat=] 1214 | { fprintf (stderr, "Failed to open sequence file %s\n", argv) ; | ~^ ~~~~ | | | | | char ** | char * gfcode.c:1220:50: warning: format ‘%s’ expects argument of type ‘char *’, but argument 3 has type ‘char **’ [-Wformat=] 1220 | { fprintf (stderr, "Errors reading sequence %s\n", argv) ; | ~^ ~~~~ | | | | | char ** | char * At top level: gfcode.c:79:14: warning: ‘localGf’ defined but not used [-Wunused-variable] 79 | static BOOL localGf = TRUE ; | ^~~~~~~ gfcode.c: In function ‘aceSites.part.0.isra’: gfcode.c:1138:3: warning: ‘idx’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1138 | printf ("%s\tGenefinder\t%s\t%d\t%d\t%.4f\t%c\t%c\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1139 | seqName, featName[idx], start, end, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1140 | score, comp ? '-' : '+', '.') ; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gfcode.c:1112:19: note: ‘idx’ was declared here 1112 | int start, end, idx; | ^~~ gfcode.c:1138:3: warning: ‘end’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1138 | printf ("%s\tGenefinder\t%s\t%d\t%d\t%.4f\t%c\t%c\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1139 | seqName, featName[idx], start, end, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1140 | score, comp ? '-' : '+', '.') ; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gfcode.c:1112:14: note: ‘end’ was declared here 1112 | int start, end, idx; | ^~~ gfcode.c:1138:3: warning: ‘start’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1138 | printf ("%s\tGenefinder\t%s\t%d\t%d\t%.4f\t%c\t%c\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1139 | seqName, featName[idx], start, end, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1140 | score, comp ? '-' : '+', '.') ; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gfcode.c:1112:7: note: ‘start’ was declared here 1112 | int start, end, idx; | ^~~~~ gfcode.c:1138:3: warning: ‘idx’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1138 | printf ("%s\tGenefinder\t%s\t%d\t%d\t%.4f\t%c\t%c\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1139 | seqName, featName[idx], start, end, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1140 | score, comp ? '-' : '+', '.') ; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gfcode.c:1112:19: note: ‘idx’ was declared here 1112 | int start, end, idx; | ^~~ gfcode.c:1138:3: warning: ‘end’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1138 | printf ("%s\tGenefinder\t%s\t%d\t%d\t%.4f\t%c\t%c\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1139 | seqName, featName[idx], start, end, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1140 | score, comp ? '-' : '+', '.') ; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gfcode.c:1112:14: note: ‘end’ was declared here 1112 | int start, end, idx; | ^~~ gfcode.c:1138:3: warning: ‘start’ may be used uninitialized in this function [-Wmaybe-uninitialized] 1138 | printf ("%s\tGenefinder\t%s\t%d\t%d\t%.4f\t%c\t%c\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1139 | seqName, featName[idx], start, end, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1140 | score, comp ? '-' : '+', '.') ; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gfcode.c:1112:7: note: ‘start’ was declared here 1112 | int start, end, idx; | ^~~~~ gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security readseq.c readseq.c: In function ‘add’: readseq.c:48:4: warning: implicit declaration of function ‘memcpy’ [-Wimplicit-function-declaration] 48 | memcpy (newbuf, *buf, n) ; | ^~~~~~ readseq.c:48:4: warning: incompatible implicit declaration of built-in function ‘memcpy’ readseq.c:21:1: note: include ‘’ or provide a declaration of ‘memcpy’ 20 | #include "ctype.h" +++ |+#include 21 | readseq.c: In function ‘readSequence’: readseq.c:121:15: warning: array subscript has type ‘char’ [-Wchar-subscripts] 121 | if (conv[c] < -1) | ^ readseq.c:130:15: warning: array subscript has type ‘char’ [-Wchar-subscripts] 130 | if (conv[c] >= 0) | ^ readseq.c:131:11: warning: array subscript has type ‘char’ [-Wchar-subscripts] 131 | add (conv[c], seq, &buflen, n++) ; | ^ readseq.c: In function ‘writeSequence’: readseq.c:190:19: warning: array subscript has type ‘char’ [-Wchar-subscripts] 190 | if (conv[seq[i]] > 0) | ~~~^~~ readseq.c:191:17: warning: array subscript has type ‘char’ [-Wchar-subscripts] 191 | fputc (conv[seq[i]], fil) ; | ~~~^~~ readseq.c: In function ‘readMatrix’: readseq.c:215:5: warning: implicit declaration of function ‘strcpy’ [-Wimplicit-function-declaration] 215 | strcpy (matdirname, getenv ("BLASTMAT")) ; | ^~~~~~ readseq.c:215:5: warning: incompatible implicit declaration of built-in function ‘strcpy’ readseq.c:215:5: note: include ‘’ or provide a declaration of ‘strcpy’ readseq.c:217:5: warning: incompatible implicit declaration of built-in function ‘strcpy’ 217 | strcpy (matdirname, "/nfs/disk100/pubseq/blastdb/") ; | ^~~~~~ readseq.c:217:5: note: include ‘’ or provide a declaration of ‘strcpy’ readseq.c:218:3: warning: incompatible implicit declaration of built-in function ‘strcpy’ 218 | strcpy (fullname, matdirname) ; | ^~~~~~ readseq.c:218:3: note: include ‘’ or provide a declaration of ‘strcpy’ readseq.c:219:3: warning: implicit declaration of function ‘strcat’ [-Wimplicit-function-declaration] 219 | strcat (fullname, name) ; | ^~~~~~ readseq.c:219:3: warning: incompatible implicit declaration of built-in function ‘strcat’ readseq.c:219:3: note: include ‘’ or provide a declaration of ‘strcat’ readseq.c:233:22: warning: array subscript has type ‘char’ [-Wchar-subscripts] 233 | { symb[i] = conv[*p] ; | ^~ readseq.c:252:21: warning: array subscript has type ‘char’ [-Wchar-subscripts] 252 | if (p && conv[*p] == symb[i]) | ^~ gcc -g -Wl,-z,relro -Wl,-z,now -o genefeatures gfcode.o readseq.o -lm make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' make[2]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' make[1]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' debian/rules override_dh_auto_test make[1]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' cd bin && ln -s ../w2/graphtest.c dh_auto_test || true make -j4 test make[2]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' making xtest for LINUX_4 making coltest for LINUX_4 making giftest for LINUX_4 making boxtest for LINUX_4 make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphtest.o graphtest.c make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o aceversion.o aceversion.c make[3]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o aceversion.o aceversion.c gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o coltest.o coltest.c make[3]: *** No rule to make target 'graphboxtest.o', needed by 'boxtest'. Stop. make[3]: *** Waiting for unfinished jobs.... graphtest.c:102:28: warning: missing braces around initializer [-Wmissing-braces] 102 | static FREEOPT options[] = { 4,"Options", | ^ | { } 103 | 'd',"Quit", | { } 104 | 'f',"Finish", | { } 105 | 'p',"Pop", | { } 106 | 't',"Retitle", | { 107 | } ; | } graphtest.c: In function ‘keyboard’: graphtest.c:141:15: warning: implicit declaration of function ‘graphOut’ [-Wimplicit-function-declaration] 141 | case 'o': graphOut (messprintf ("%s%s%s", | ^~~~~~~~ graphtest.c:146:11: warning: implicit declaration of function ‘graphQuery’; did you mean ‘graphWhere’? [-Wimplicit-function-declaration] 146 | if (graphQuery (prompt)) | ^~~~~~~~~~ | graphWhere graphtest.c:152:11: warning: implicit declaration of function ‘graphPrompt’; did you mean ‘graphPrint’? [-Wimplicit-function-declaration] 152 | if (graphPrompt ("New prompt for query:",prompt,"t")) | ^~~~~~~~~~~ | graphPrint graphtest.c: At top level: graphtest.c:180:25: warning: missing braces around initializer [-Wmissing-braces] 180 | static MENUOPT menu[] = { | ^ 181 | graphDestroy, "Quit", | { } 182 | graphPrint, "Print Screen", | { } 183 | boxInfo, "Box info", | { } 184 | where, "Where", | { } 185 | 0, 0 } ; | { } graphtest.c:187:6: warning: return type of ‘main’ is not ‘int’ [-Wmain] 187 | void main (int argc, char **argv) | ^~~~ graphtest.c: In function ‘main’: graphtest.c:233:3: warning: implicit declaration of function ‘graphRampTool’ [-Wimplicit-function-declaration] 233 | graphRampTool () ; | ^~~~~~~~~~~~~ graphtest.c:189:21: warning: variable ‘g4’ set but not used [-Wunused-but-set-variable] 189 | Graph g1, g2, g3, g4 ; | ^~ graphtest.c:189:17: warning: variable ‘g3’ set but not used [-Wunused-but-set-variable] 189 | Graph g1, g2, g3, g4 ; | ^~ graphtest.c:189:13: warning: variable ‘g2’ set but not used [-Wunused-but-set-variable] 189 | Graph g1, g2, g3, g4 ; | ^~ graphtest.c:189:9: warning: variable ‘g1’ set but not used [-Wunused-but-set-variable] 189 | Graph g1, g2, g3, g4 ; | ^~ coltest.c:63:32: warning: missing braces around initializer [-Wmissing-braces] 63 | static MENUOPT exampleMenu[] = { | ^ 64 | graphDestroy, "Quit", | { } 65 | 0,0 | { 66 | }; | } coltest.c:72:1: warning: return type defaults to ‘int’ [-Wimplicit-int] 72 | main(int argc, char *argv[]) | ^~~~ coltest.c: In function ‘main’: coltest.c:95:19: warning: assignment to ‘float (*)(struct MapControlStruct *)’ from incompatible pointer type ‘void (*)(struct MapControlStruct *)’ [-Wincompatible-pointer-types] 95 | map->drawHeader = exampleDrawHeader; /* draw the header */ | ^ coltest.c: At top level: coltest.c:273:36: warning: missing braces around initializer [-Wmissing-braces] 273 | static COLOUROPT exampleButton[] = { | ^ 274 | exampleButtonPressed, 0, /* 0 is arg to function */ | { 275 | BLACK, WHITE, 276 | "A Button", 0 }; | } coltest.c:278:33: warning: missing braces around initializer [-Wmissing-braces] 278 | static MENUOPT menuOnButton[] = { | ^ 279 | graphDestroy, "Quit-from-button", | { } 280 | 0, 0}; | { } coltest.c:291:3: warning: initialization of ‘void (*)(struct ProtoStruct *, struct MapControlStruct *)’ from incompatible pointer type ‘void (*)(struct MapControlStruct *, struct ColControlStruct *)’ [-Wincompatible-pointer-types] 291 | exampleInit, /* called from controlAddMap for each prototype */ | ^~~~~~~~~~~ coltest.c:291:3: note: (near initialization for ‘exampleColumn.init’) make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' make[2]: *** [makefile:95: boxtest] Error 2 make[2]: *** Waiting for unfinished jobs.... gcc -g -Wall -DACEDB4 `../w3rdparty/include-config glib-2.0 gtk+-2.0` -g -O2 -fdebug-prefix-map=/build/acedb-8yY35X/acedb-4.9.39+dfsg.02=. -fstack-protector-strong -Wformat -Werror=format-security -I.. -I../wh -I../wstaden -DACEDB_GTK -DLINUX -c -o graphtest.o graphtest.c ar rlu libfree.a aceversion.o ar: `u' modifier ignored since `D' is the default (see `U') gcc -g -Wl,-z,relro -Wl,-z,now -o coltest coltest.o -L. -lgex -lgraph -lgd -lfree `../w3rdparty/acedb-config glib-2.0 gtk+-2.0` -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 gcc -g -Wl,-z,relro -Wl,-z,now -o giftest graphtest.o -L. -lgraph -lgd -lfree -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 graphtest.c:102:28: warning: missing braces around initializer [-Wmissing-braces] 102 | static FREEOPT options[] = { 4,"Options", | ^ | { } 103 | 'd',"Quit", | { } 104 | 'f',"Finish", | { } 105 | 'p',"Pop", | { } 106 | 't',"Retitle", | { 107 | } ; | } graphtest.c: In function ‘keyboard’: graphtest.c:141:15: warning: implicit declaration of function ‘graphOut’ [-Wimplicit-function-declaration] 141 | case 'o': graphOut (messprintf ("%s%s%s", | ^~~~~~~~ graphtest.c:146:11: warning: implicit declaration of function ‘graphQuery’; did you mean ‘graphWhere’? [-Wimplicit-function-declaration] 146 | if (graphQuery (prompt)) | ^~~~~~~~~~ | graphWhere graphtest.c:152:11: warning: implicit declaration of function ‘graphPrompt’; did you mean ‘graphPrint’? [-Wimplicit-function-declaration] 152 | if (graphPrompt ("New prompt for query:",prompt,"t")) | ^~~~~~~~~~~ | graphPrint graphtest.c: At top level: graphtest.c:180:25: warning: missing braces around initializer [-Wmissing-braces] 180 | static MENUOPT menu[] = { | ^ 181 | graphDestroy, "Quit", | { } 182 | graphPrint, "Print Screen", | { } 183 | boxInfo, "Box info", | { } 184 | where, "Where", | { } 185 | 0, 0 } ; | { } graphtest.c:187:6: warning: return type of ‘main’ is not ‘int’ [-Wmain] 187 | void main (int argc, char **argv) | ^~~~ graphtest.c: In function ‘main’: graphtest.c:233:3: warning: implicit declaration of function ‘graphRampTool’ [-Wimplicit-function-declaration] 233 | graphRampTool () ; | ^~~~~~~~~~~~~ graphtest.c:189:21: warning: variable ‘g4’ set but not used [-Wunused-but-set-variable] 189 | Graph g1, g2, g3, g4 ; | ^~ graphtest.c:189:17: warning: variable ‘g3’ set but not used [-Wunused-but-set-variable] 189 | Graph g1, g2, g3, g4 ; | ^~ graphtest.c:189:13: warning: variable ‘g2’ set but not used [-Wunused-but-set-variable] 189 | Graph g1, g2, g3, g4 ; | ^~ graphtest.c:189:9: warning: variable ‘g1’ set but not used [-Wunused-but-set-variable] 189 | Graph g1, g2, g3, g4 ; | ^~ /usr/bin/ld: ./libgraph.a(graphascii.o): in function `graphASCII': ./bin.LINUX_4/graphascii.c:264: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: ./libgraph.a(graphprint.o): in function `pdInit': ./bin.LINUX_4/graphprint.c:1164: warning: the `getwd' function is dangerous and should not be used. /usr/bin/ld: ./libgraph.a(graphascii.o): in function `graphASCII': ./bin.LINUX_4/graphascii.c:264: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: ./libgraph.a(graphprint.o): in function `pdInit': ./bin.LINUX_4/graphprint.c:1164: warning: the `getwd' function is dangerous and should not be used. /usr/bin/ld: graphtest.o: in function `keyboard': ./bin.LINUX_4/graphtest.c:141: undefined reference to `graphOut' /usr/bin/ld: ./bin.LINUX_4/graphtest.c:146: undefined reference to `graphQuery' /usr/bin/ld: ./bin.LINUX_4/graphtest.c:152: undefined reference to `graphPrompt' /usr/bin/ld: graphtest.o: in function `main': ./bin.LINUX_4/graphtest.c:233: undefined reference to `graphRampTool' collect2: error: ld returned 1 exit status make[3]: *** [makefile:1225: giftest] Error 1 make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' make[2]: *** [makefile:95: giftest] Error 2 gcc -g -Wl,-z,relro -Wl,-z,now -o xtest graphtest.o -L. -lgex -lgraph -lgd -lfree `../w3rdparty/acedb-config glib-2.0 gtk+-2.0` -L/usr/X11R6/lib `../w3rdparty/libs-config glib-2.0 gtk+-2.0` -lm -lreadline -lX11 make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' /usr/bin/ld: ./libgraph.a(graphascii.o): in function `graphASCII': ./bin.LINUX_4/graphascii.c:264: warning: the use of `tempnam' is dangerous, better use `mkstemp' /usr/bin/ld: ./libgraph.a(graphprint.o): in function `pdInit': ./bin.LINUX_4/graphprint.c:1164: warning: the `getwd' function is dangerous and should not be used. /usr/bin/ld: graphtest.o: in function `keyboard': ./bin.LINUX_4/graphtest.c:141: undefined reference to `graphOut' /usr/bin/ld: ./bin.LINUX_4/graphtest.c:146: undefined reference to `graphQuery' /usr/bin/ld: ./bin.LINUX_4/graphtest.c:152: undefined reference to `graphPrompt' /usr/bin/ld: graphtest.o: in function `main': ./bin.LINUX_4/graphtest.c:233: undefined reference to `graphRampTool' collect2: error: ld returned 1 exit status make[3]: *** [makefile:1219: xtest] Error 1 make[3]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02/bin.LINUX_4' make[2]: *** [makefile:94: xtest] Error 2 make[2]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' dh_auto_test: error: make -j4 test returned exit code 2 make[1]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' create-stamp debian/debhelper-build-stamp dh_testroot -i dh_prep -i debian/rules override_dh_auto_install make[1]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' mkdir -p debian/tmp/usr/bin cp -d `find bin/ -type f -a -executable` debian/tmp/usr/bin # dh_install --autodest -s make[1]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' dh_install -i dh_installdocs -i dh_installchangelogs -i dh_installman -i dh_perl -i dh_link -i dh_strip_nondeterminism -i dh_compress -i debian/rules override_dh_fixperms make[1]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' dh_fixperms rm -rf `find debian -name sbin -type d -empty` make[1]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' debian/rules override_dh_missing make[1]: Entering directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' dh_missing --list-missing dh_missing: warning: usr/bin/acediff exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/acediffsorted exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/blixelect exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/blixem exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/coltest exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/diskdump exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/diskfix exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/genefeatures exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/gnbk exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/gnbkclient exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/homonym exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/jade2ace exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/makeUserPasswd exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/metacheck exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/pmapace exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/bin/tagcount exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: acedb-other (1), acedb-other-belvu (0), acedb-other-dotter (0) * dh_installdocs: acedb-other (0), acedb-other-belvu (0), acedb-other-dotter (0) * dh_installman: acedb-other (1), acedb-other-belvu (0), acedb-other-dotter (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. make[1]: Leaving directory '/build/acedb-8yY35X/acedb-4.9.39+dfsg.02' dh_installdeb -i dh_gencontrol -i dh_md5sums -i dh_builddeb -i dpkg-deb: building package 'acedb-other-belvu' in '../acedb-other-belvu_4.9.39+dfsg.02-5_all.deb'. dpkg-deb: building package 'acedb-other-dotter' in '../acedb-other-dotter_4.9.39+dfsg.02-5_all.deb'. dpkg-genbuildinfo --build=all dpkg-genchanges --build=all >../acedb_4.9.39+dfsg.02-5_all.changes dpkg-genchanges: info: binary-only arch-indep upload (source code and arch-specific packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: running special hook: sync-out /build/acedb-8yY35X /tmp/acedb-4.9.39+dfsg.02-5g83y217u I: cleaning package lists and apt cache... I: creating tarball... I: done I: removing tempdir /tmp/mmdebstrap.MbvbqR_nMz... I: success in 557.3635 seconds md5: acedb-other-belvu_4.9.39+dfsg.02-5_all.deb: OK md5: acedb-other-dotter_4.9.39+dfsg.02-5_all.deb: OK sha1: acedb-other-belvu_4.9.39+dfsg.02-5_all.deb: OK sha1: acedb-other-dotter_4.9.39+dfsg.02-5_all.deb: OK sha256: acedb-other-belvu_4.9.39+dfsg.02-5_all.deb: OK sha256: acedb-other-dotter_4.9.39+dfsg.02-5_all.deb: OK Checksums: OK